ID:

dpe_1332

 Coordinate:

scaffold_296:24403-24511 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

0.7

Flybase annnotation

exon [dper_GLEANR_13475:1]; CDS [Dper\GL13186-cds]; exon [dper_GLEANR_13475:2]; CDS [Dper\GL13186-cds]; intron [Dper\GL13186-in]

No Repeatable elements found

mature
  1. scaffold_169:8197-8219 +
  2. dpe_1332  scaffold_296:24461-24483 -
  3. scaffold_325:14591-14613 +
  4. scaffold_6860:696-718 +
star
  1. scaffold_169:8248-8269 +
  2. dpe_1332  scaffold_296:24411-24432 -
  3. scaffold_325:14639-14660 +
  4. scaffold_6860:747-768 +

Sense Strand Reads

##################################################-------------------------------------------------------------------------------------------------------------##################################################
GAACCCGTTGCGTATCGAACTTGGTTCGAGTTCGAGCAGCGGGTCGATCCGTGCCGTTGCCCAGCCTGCACCAATACAAAGACAACTAGCAACAACACAACCGCAATCACCACCACCAATCCCACCAACACCAAAACGACGCCATGCCCTCATCGTCAGTGGGAGCGACGATGAGGAGGGTGAGGGTGAGAGGAAACAGGCCAGACGAC
******************************************************************************.........................................................................********************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V111
male body		 V042
embryo
 M021
embryo
 V057
head
..........................................................................................................................................................................................TGAGAGGAAACAGGCCAGACGA. 22 0 3 5.33 16 12 2 2 0 0
..............................................................................AAGACAACTAGCAACAACACAAC............................................................................................................ 23 0 4 4.00 16 15 0 1 0 0
..............................................................................AAGACAACTAGCAACAACACAACC........................................................................................................... 24 0 4 4.00 16 16 0 0 0 0
..........................................................................................................................................................................................TGAGAGGAAACAGGCCAGACGAC 23 0 3 3.67 11 9 1 0 1 0
..............................................................................AAGACAACTAGCAACAACACAACCG.......................................................................................................... 25 0 4 2.75 11 10 1 0 0 0
.........GCGTATCGAACTTGGTTCGAGT.................................................................................................................................................................................. 22 0 5 2.60 13 11 1 1 0 0
..........................................................................................................................................................................................TGAGAGGAAACAGGCCAGACG.. 21 0 3 2.00 6 6 0 0 0 0
...........................................................................................................................................................TCAGTGGGAGCGACGATGAGGAG............................... 23 0 4 1.75 7 1 5 1 0 0
..........................................................................................................................................................................................TGAGAGGAAACAGGCCAGAC... 20 0 3 1.33 4 3 0 1 0 0
..............................................................................AAGACAACTAGCAACAACACAACCGC......................................................................................................... 26 0 4 1.25 5 5 0 0 0 0
.................................................................................................................................ACCAAAACGACGCCATGCCCTC.......................................................... 22 0 4 1.25 5 5 0 0 0 0
.......TTGCGTATCGAACTTGGTTCG..................................................................................................................................................................................... 21 0 8 1.00 8 4 0 2 2 0
........................TTCGAGTTCGAGCAGCGGGT..................................................................................................................................................................... 20 0 5 1.00 5 5 0 0 0 0
..............................................................................AAGACAACTAGCAACAACACAACCGCA........................................................................................................ 27 0 4 1.00 4 4 0 0 0 0
.........GCGTATCGAACTTGGTTCGAGTTC................................................................................................................................................................................ 24 0 5 1.00 5 5 0 0 0 0
........TGCGTATCGAACTTGGTTCGAGT.................................................................................................................................................................................. 23 0 5 0.80 4 3 0 1 0 0
..........................................GTCGATCCGTGCCGTTGCC.................................................................................................................................................... 19 0 4 0.75 3 0 0 0 3 0
.................................................................................................................................ACCAAAACGACGCCATGCCCTCA......................................................... 23 0 4 0.75 3 3 0 0 0 0
..............................................................................AAGACAACTAGCAACAACACAACCGCAA....................................................................................................... 28 0 4 0.75 3 3 0 0 0 0
...........................................................................................................................................................TCAGTGGGAGCGACGATGAGGAGGGT............................ 26 0 4 0.75 3 0 3 0 0 0
..........................................................................................................................................................................................TGAGAGGAAACAGGCCAG..... 18 0 4 0.75 3 1 2 0 0 0
................................................................................................................................................TGCCCTCATCGTCAGTGGGAGCGAC........................................ 25 0 4 0.75 3 3 0 0 0 0
.................................................................................................................................ACCAAAACGACGCCATGCCCT........................................................... 21 0 4 0.75 3 3 0 0 0 0
.................................................................................................................................ACCAAAACGACGCCATGCCCTCAT........................................................ 24 0 4 0.75 3 3 0 0 0 0
..........................................................................................................................................................................................TGAGAGGAAACAGGCCAGA.... 19 0 3 0.67 2 2 0 0 0 0
.........GCGTATCGAACTTGGTTCGAGTTCG............................................................................................................................................................................... 25 0 5 0.60 3 3 0 0 0 0
...........................................................................................................................................................TCAGTGGGAGCGACGATGAG.................................. 20 0 4 0.50 2 2 0 0 0 0
................................................................................................................................................TGCCCTCATCGTCAGTGGGAGC........................................... 22 0 4 0.50 2 2 0 0 0 0
.................................................................................................................................ACCAAAACGACGCCATGCCCTCATC....................................................... 25 0 4 0.50 2 2 0 0 0 0
...........................................................................................................................................CGCCATGCCCTCATCGTCAGTGGGAG............................................ 26 0 4 0.50 2 2 0 0 0 0
..............................................................................AAGACAACTAGCAACAACACAGC............................................................................................................ 23 1 4 0.50 2 2 0 0 0 0
...............................................................................AGACAACTAGCAACAACACAACC........................................................................................................... 23 0 4 0.50 2 2 0 0 0 0
...............................................................................AGACAACTAGCAACAACACAAC............................................................................................................ 22 0 4 0.50 2 2 0 0 0 0
..............................................................................AAGACAACAAGCAACAACACAACC........................................................................................................... 24 1 4 0.50 2 2 0 0 0 0
..............TCGAACTTGGTTCGAGTTCGAGCAG.......................................................................................................................................................................... 25 0 5 0.40 2 2 0 0 0 0
.........GCGTATCGAACTTGGTTCGAGTTCGAGC............................................................................................................................................................................ 28 0 5 0.40 2 2 0 0 0 0
.......................GTTCGAGTTCGAGCAGCGGG...................................................................................................................................................................... 20 0 5 0.40 2 1 1 0 0 0
....CCGTTGCGTATCGAACTTGGTTC...................................................................................................................................................................................... 23 0 8 0.38 3 3 0 0 0 0
..........................................................................................................TCACCACCACCAATCCCACCAACA............................................................................... 24 0 3 0.33 1 1 0 0 0 0
.................................................................................................CAACCGCAATCACCACCACC............................................................................................ 20 0 3 0.33 1 1 0 0 0 0
...........................................................................................................................................................................................GAGAGGAAACAGGCCAGACGAC 22 0 3 0.33 1 1 0 0 0 0
..........................................................................................................................................................................................TGAGAGGACACAGGCCAGACG.. 21 1 3 0.33 1 1 0 0 0 0
.........................................................................................................................................................................................GTGAGAGGAAACAGGCCAGACGAT 24 1 3 0.33 1 0 1 0 0 0
.............................................................................................................CCACCACCAATCCCACCAACAAAA............................................................................ 24 2 3 0.33 1 1 0 0 0 0
.........................................................................................................................................................................................GTGAGAGGAAACAGGCCAGACGA. 23 0 3 0.33 1 1 0 0 0 0
...........................................................................................................................................................................................GAGAGGAAACAGGCCAGAC... 19 0 3 0.33 1 1 0 0 0 0
...........................................................................................................................................................................................GAGAGGAAACAGGCCAGACGA. 21 0 3 0.33 1 1 0 0 0 0
..........................................................................................................TCACCACCACCAATCCCACGA.................................................................................. 21 1 3 0.33 1 1 0 0 0 0
.......................................................................................................CAATCACCACCACCAATCC....................................................................................... 19 0 3 0.33 1 1 0 0 0 0
..................................AGCAGCGGGTCGATCCGTGC........................................................................................................................................................... 20 0 7 0.29 2 2 0 0 0 0
........................................GGGTCGATCCGTGCCGTTG...................................................................................................................................................... 19 0 4 0.25 1 1 0 0 0 0
........................................................................................................................................................................CGATGAGGAGGGTGAGGGT...................... 19 0 4 0.25 1 1 0 0 0 0
.................................................................................ACAACTAGCAACAACACAACCGCA........................................................................................................ 24 0 4 0.25 1 1 0 0 0 0
...........................................................................................................................................................TCAGTGGGAGCGACGATGAGGTGG.............................. 24 1 4 0.25 1 1 0 0 0 0
................................................................................................................................................TGCCCTCATCGTCAGTGG............................................... 18 0 4 0.25 1 1 0 0 0 0
.AACCCGTTGCGTATCGAACTT........................................................................................................................................................................................... 21 0 8 0.25 2 2 0 0 0 0
..............................................................................AAGACAACTAGCAACAACACAA............................................................................................................. 22 0 4 0.25 1 1 0 0 0 0
...............................................................................AGACAACTAGCAACAACAC............................................................................................................... 19 0 4 0.25 1 1 0 0 0 0
......................................................................................................................................AACGACGCCATGCCCTCATCGTCAG.................................................. 25 0 4 0.25 1 1 0 0 0 0
..............................................................................AAGACAACTAGCAACAACACAACCGA......................................................................................................... 26 1 4 0.25 1 1 0 0 0 0
......................................................................................................................................................................GACGATGAGGAGGGTGAGGG....................... 20 0 4 0.25 1 0 1 0 0 0
.........................................................................................................................................GACGCCATGCCCTCATCGTCAGTGGGA............................................. 27 0 4 0.25 1 1 0 0 0 0
...........................................................................................................................................CGCCATGCCCTCATCGTCAGTGG............................................... 23 0 4 0.25 1 1 0 0 0 0
.................................................................................................................................ACCAAAACGACGCCATGCCC............................................................ 20 0 4 0.25 1 1 0 0 0 0
..................................................................................................................................CCAAAACGACGCCATGCCCTCA......................................................... 22 0 4 0.25 1 1 0 0 0 0
.........................................................................................................................................GACGCCATGCCCTCATCGTCAGTGG............................................... 25 0 4 0.25 1 1 0 0 0 0
...............................................................................AGACAACTAGCAACAACACAACCG.......................................................................................................... 24 0 4 0.25 1 1 0 0 0 0
..............................................................................AAGACAACGAGCAACAACACAACCGCAA....................................................................................................... 28 1 4 0.25 1 1 0 0 0 0
.......................................................................................................................................................................ACGATGAGGAGGGTGAGGG....................... 19 0 4 0.25 1 1 0 0 0 0
.....................................AGCGGGTCGATCCGTGCCGTTGA..................................................................................................................................................... 23 1 4 0.25 1 1 0 0 0 0
....................................................................................................................................................................................TGAGGGTGAGAGGAAACAG.......... 19 0 4 0.25 1 0 0 1 0 0
.................................................................................................................................ACCAAAACAACGCCATGCCCTCA......................................................... 23 1 4 0.25 1 1 0 0 0 0
....................................................................................................................................................................................TGAGGGTGAGAGGAAACAGGC........ 21 0 4 0.25 1 1 0 0 0 0
.................................................................................................................................................GCCCTCATCGTCACTGGGAGCA.......................................... 22 2 4 0.25 1 1 0 0 0 0
................................................................................................................................CACCAAAACGACGCCATGCCCTCATCG...................................................... 27 0 4 0.25 1 1 0 0 0 0
....................................................................................ACTAGCAACAACACAACCGC......................................................................................................... 20 0 4 0.25 1 1 0 0 0 0
........TGCGTATCGAACTTGGTTCG..................................................................................................................................................................................... 20 0 8 0.25 2 2 0 0 0 0
................................................................................................................................................................................AGGGTGAGGGTGAGAGGAAAC............ 21 0 4 0.25 1 1 0 0 0 0
.................................................................................................................................ACCAAAACGACGCCATGCT............................................................. 19 1 4 0.25 1 1 0 0 0 0
.........................................................................................................................................................................................GTGAGAGGAAACAGGCCAG..... 19 0 4 0.25 1 1 0 0 0 0
...........................................................................................................................................CGCCATGCCCTCATCGTCAGTGGGA............................................. 25 0 4 0.25 1 1 0 0 0 0
...............................................................................AGACAACTAGCAACAACACAACCGC......................................................................................................... 25 0 4 0.25 1 1 0 0 0 0
..................................................................................................................................CCAAAACGACGCCATGCCCTCATC....................................................... 24 0 4 0.25 1 1 0 0 0 0
..............................................................................AAGACAACTACCAACAACACAAC............................................................................................................ 23 1 4 0.25 1 1 0 0 0 0
.......................................................................................................................TCCCACCAACACCAAAACGACGCCA................................................................. 25 0 4 0.25 1 1 0 0 0 0
.................................................................................................................................ACCAAAACGACGCCATGCCCTCATCG...................................................... 26 0 4 0.25 1 1 0 0 0 0
.....................................................................................................................................................................CGACGATGAGGAGGGTGAGG........................ 20 0 4 0.25 1 1 0 0 0 0
.......................................CGGGTCGATCCGTGCCGTTGCCCAGC................................................................................................................................................ 26 0 4 0.25 1 1 0 0 0 0
...............................................................................AGACAACTAGCAACAACACAACCGCA........................................................................................................ 26 0 4 0.25 1 1 0 0 0 0
..............................................................................AAGACAACGAGCAACAACACAACC........................................................................................................... 24 1 4 0.25 1 1 0 0 0 0
..................................................................................................................................CCAAAACGACGCCATGCCCT........................................................... 20 0 4 0.25 1 1 0 0 0 0
.................................................................................................................................ACCAAAACGACGCCATGCC............................................................. 19 0 4 0.25 1 1 0 0 0 0
...............................................TCCGTGCCGTTGCCCAGCCTG............................................................................................................................................. 21 0 4 0.25 1 1 0 0 0 0
.AACCCGTTGCGTATCGAACTTGGTT....................................................................................................................................................................................... 25 0 8 0.25 2 1 0 1 0 0
....................................................................................................................................................................................TGAGGGTGAGAGGAAACAGG......... 20 0 4 0.25 1 0 0 1 0 0
................................................................................................................................................TGCCCTCATCGTCAGTGGGA............................................. 20 0 4 0.25 1 1 0 0 0 0
.................................................................................ACAACTAGCAACAACACAACC........................................................................................................... 21 0 4 0.25 1 1 0 0 0 0
...........................................................................................................................................................TCAGTGGGAGCGACGATGAGG................................. 21 0 4 0.25 1 1 0 0 0 0
................................................................................................................................................GGCCCTCATCGTCAGTGGGAGCG.......................................... 23 1 4 0.25 1 1 0 0 0 0
...........................................................................................................................................................TCAGTGGGTGCGACGATGAGGAGG.............................. 24 1 4 0.25 1 1 0 0 0 0
..........................................................................TACAAAGACAACTAGCAACAACACAA............................................................................................................. 26 0 4 0.25 1 1 0 0 0 0
..............................................................................GAGACAACTAGCAACAACACAAC............................................................................................................ 23 1 4 0.25 1 1 0 0 0 0
.........................................................................................................................CCACCAACACCAAAACGACGCCATG............................................................... 25 0 4 0.25 1 1 0 0 0 0
................................................................................................................................................TGCCCTCATCGTCAGTGGGAGT........................................... 22 1 4 0.25 1 1 0 0 0 0
.................................GATCAGCGGTTCGATCCC.............................................................................................................................................................. 18 3 20 0.25 5 5 0 0 0 0
..................................................................................CAACTAGCAACAACACAACCG.......................................................................................................... 21 0 4 0.25 1 1 0 0 0 0
..............................................................................TAGACAACTAGCAACAACACAACC........................................................................................................... 24 1 4 0.25 1 1 0 0 0 0
.........GCGTATCGAACTTGGTTCG..................................................................................................................................................................................... 19 0 8 0.25 2 2 0 0 0 0
..............................................................................AAGACAACTAGCAACAACACA.............................................................................................................. 21 0 4 0.25 1 1 0 0 0 0
..................................................................................................................................CCAAAACGACGCCATGCCCTC.......................................................... 21 0 4 0.25 1 1 0 0 0 0
................................................................................................................................................................................AGGGTGAGGGTGAGAGGAAACAGG......... 24 0 4 0.25 1 1 0 0 0 0
......................................................................................TAGCAACAACACAACCGCAATC..................................................................................................... 22 0 4 0.25 1 1 0 0 0 0
GAACCCGTTGCGTATCGAACTTGGTT....................................................................................................................................................................................... 26 0 8 0.25 2 2 0 0 0 0
...........................................................................................................................................................TCAGTGGGAGCGACGATGAGGAGGG............................. 25 0 4 0.25 1 1 0 0 0 0
......................................................................................................................................................................GACGATGAGGAGGGTGAGG........................ 19 0 4 0.25 1 1 0 0 0 0
...........................................................................................................................................................TCAGTGGGAGCGACGATA.................................... 18 1 5 0.20 1 1 0 0 0 0
..........................CGAGTTCGAGCAGCGGGTC.................................................................................................................................................................... 19 0 5 0.20 1 1 0 0 0 0
................GAACTTGGTTCGAGTTCGAGCAGC......................................................................................................................................................................... 24 0 5 0.20 1 1 0 0 0 0
..........................CGAGTTCGAGCAGCGGGTCGAT................................................................................................................................................................. 22 0 5 0.20 1 1 0 0 0 0
........................TTCGAGTTCGAGCAGCGGGTC.................................................................................................................................................................... 21 0 5 0.20 1 1 0 0 0 0
...........................................................................................................................................................TCAGTGGGAGCGACGATGAGA................................. 21 1 5 0.20 1 1 0 0 0 0
.........GCGTATCGAACTTGGTTCGAGTTCGA.............................................................................................................................................................................. 26 0 5 0.20 1 1 0 0 0 0
....................TTGGTTCGAGTTCGAGCAGCGGGT..................................................................................................................................................................... 24 0 5 0.20 1 1 0 0 0 0
.........GCGTATCGAATTTGGTTCGAGTTCG............................................................................................................................................................................... 25 1 5 0.20 1 0 1 0 0 0
.........GCGTATCGAACTTGGTTCGAGTCCT............................................................................................................................................................................... 25 2 5 0.20 1 1 0 0 0 0
.......................GTTCGAGTTCGAGCAGCGGGT..................................................................................................................................................................... 21 0 5 0.20 1 1 0 0 0 0
.........................TCGAGTTCGAGCAGCGGGTC.................................................................................................................................................................... 20 0 5 0.20 1 1 0 0 0 0
.........GCGTATCGAACTTGGTTCGAGTTA................................................................................................................................................................................ 24 1 5 0.20 1 1 0 0 0 0
.................AACTTGGTTCGAGTTCGAGCAGCG........................................................................................................................................................................ 24 0 5 0.20 1 1 0 0 0 0
.........................TCGAGTTCGAGCAGCGGGTCGATC................................................................................................................................................................ 24 0 5 0.20 1 1 0 0 0 0
..............................TTCGAGCAGCGGGTCGATC................................................................................................................................................................ 19 0 5 0.20 1 1 0 0 0 0
............................AGTTCGAGCAGCGGGTCGAT................................................................................................................................................................. 20 0 5 0.20 1 1 0 0 0 0
.........GCGTATCGGACTTGGTTCGAGTTC................................................................................................................................................................................ 24 1 5 0.20 1 1 0 0 0 0
.........................TCGAGTTCGAGCAGCGGGTCGA.................................................................................................................................................................. 22 0 5 0.20 1 1 0 0 0 0
......ATCGCGTATCGAACTTGGTTCGAGTTCG............................................................................................................................................................................... 28 2 5 0.20 1 1 0 0 0 0
.........GCGTATCGGACTTGGTTCGAGT.................................................................................................................................................................................. 22 1 5 0.20 1 1 0 0 0 0
.....CGTTGCGTATCGAACTTGGTTCGAGT.................................................................................................................................................................................. 26 0 5 0.20 1 1 0 0 0 0
........................................................TTGCCCAGCCTGCACCAATA..................................................................................................................................... 20 0 5 0.20 1 1 0 0 0 0
....................TTGGTTCGAGTTCGAGCAGC......................................................................................................................................................................... 20 0 5 0.20 1 1 0 0 0 0
...CCCGTTGCGTATCGAACTTGGTT....................................................................................................................................................................................... 23 0 11 0.18 2 2 0 0 0 0
.....................................................................................................................................................TCATCGTCAGTGGGAGCGAA........................................ 20 1 6 0.17 1 1 0 0 0 0
................................CGAGCAGCGGGTCGATCCG.............................................................................................................................................................. 19 0 7 0.14 1 1 0 0 0 0
...............................TCGAGCAGCGGGTCGATCCGTGT........................................................................................................................................................... 23 1 7 0.14 1 1 0 0 0 0
............................................................................................................................................................CAGTGGGAGCGACGATGAGGAGG.............................. 23 0 7 0.14 1 1 0 0 0 0
.............................................................................................................................................................AGTGGGAGCGACGATGAGGA................................ 20 0 7 0.14 1 0 0 1 0 0
............................................................................................................................................................CAGTGGGAGCGACGATGAGG................................. 20 0 7 0.14 1 1 0 0 0 0
.................................GAGCAGCGGGTCGATCCGTG............................................................................................................................................................ 20 0 7 0.14 1 1 0 0 0 0
........................................................................................................................................CGACGCCATGCCCTCATCGTCAGTG................................................ 25 0 7 0.14 1 1 0 0 0 0
...............................................................................................................................................................TGGGAGCGACGATGAGGA................................ 18 0 7 0.14 1 0 1 0 0 0
.............................................................................................................................................CCATGCCCTCATCGTCAGT................................................. 19 0 8 0.13 1 1 0 0 0 0
.........GCGTATCGAACTTGGTTCGAG................................................................................................................................................................................... 21 0 8 0.13 1 1 0 0 0 0
....CCGTTGCGTATCGAACTTGGTTCGAG................................................................................................................................................................................... 26 0 8 0.13 1 1 0 0 0 0
............................................................................................................................................GCCATGCCCTCATCGTCAGT................................................. 20 0 8 0.13 1 0 0 1 0 0
....CCGTTGCGTATCGAACTTGGTTCG..................................................................................................................................................................................... 24 0 8 0.13 1 0 0 1 0 0
..........CGTATCGAACTTGGTTCGAG................................................................................................................................................................................... 20 0 8 0.13 1 1 0 0 0 0
GAACCCGTTGCGTATCGAACT............................................................................................................................................................................................ 21 0 8 0.13 1 1 0 0 0 0
.........GCGTATCGAACTTGGTTCGAGGTA................................................................................................................................................................................ 24 2 8 0.13 1 1 0 0 0 0
...............................................................................................................................................................TGGGAGCGACGATGAGGAGA.............................. 20 1 8 0.13 1 1 0 0 0 0
GAACCCGTTGCGTATCGAACTTGGTA....................................................................................................................................................................................... 26 1 8 0.13 1 1 0 0 0 0
GAACCCGTTGCGTATCGAACTTGG......................................................................................................................................................................................... 24 0 8 0.13 1 1 0 0 0 0
..ACCCGTTGCGTATCGAACTTG.......................................................................................................................................................................................... 21 0 8 0.13 1 1 0 0 0 0
...........................................................................................................................................................................TGAGGAGGGTGAGGGTGGTTG................. 21 3 8 0.13 1 0 1 0 0 0
GAACCCGTTGCTTATCGAACTTGGTT....................................................................................................................................................................................... 26 1 8 0.13 1 1 0 0 0 0
...CCCGTTGCGTATCGAACTTGTTTCG..................................................................................................................................................................................... 25 1 8 0.13 1 1 0 0 0 0
........TGCGTATCGAACTTGGTTCGA.................................................................................................................................................................................... 21 0 8 0.13 1 1 0 0 0 0
...........................................................................ACAAAGACAACTAGAAACTCC................................................................................................................. 21 3 17 0.12 2 2 0 0 0 0
............................................................................................................................................................CAGTGGGAGCGACGATGAAAAA............................... 22 3 9 0.11 1 1 0 0 0 0
.......................................................................................................................................ATGACGCCAAGCCCTCATG....................................................... 19 3 11 0.09 1 0 0 0 0 1
..CCTAGTTGCGTATCGAACTTGGTTCG..................................................................................................................................................................................... 26 3 11 0.09 1 1 0 0 0 0
....CCGTTGCGTATCGAACTTGG......................................................................................................................................................................................... 20 0 11 0.09 1 1 0 0 0 0
.......................................................................................................................TCCCACCAACACCAAAACGACG.................................................................... 22 0 12 0.08 1 1 0 0 0 0
..................................................................................................................................................................GAGCGACGATGAGGAGGGTA........................... 20 1 13 0.08 1 1 0 0 0 0
...................................................................................................................................................................AGCGACGATGAGGAGGGTA........................... 19 1 13 0.08 1 1 0 0 0 0
..............TCGAACTTGGTTCGAGTTCGAGC............................................................................................................................................................................ 23 0 18 0.06 1 1 0 0 0 0
.............................................GATGCGTGCCGTTGTCGAGC................................................................................................................................................ 20 3 18 0.06 1 1 0 0 0 0
.......TTGCGTATTGTACTTGGTA....................................................................................................................................................................................... 19 3 20 0.05 1 0 1 0 0 0

Anti-sense strand reads

CTTGGGCAACGCATAGCTTGAACCAAGCTCAAGCTCGTCGCCCAGCTAGGCACGGCAACGGGTCGGACGTGGTTATGTTTCTGTTGATCGTTGTTGTGTTGGCGTTAGTGGTGGTGGTTAGGGTGGTTGTGGTTTTGCTGCGGTACGGGAGTAGCAGTCACCCTCGCTGCTACTCCTCCCACTCCCACTCTCCTTTGTCCGGTCTGCTG
**********************************************************.........................................................................****************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V042
embryo
 V111
male body		 V057
head
 V050
head
................................................................GGACGTGGTTATGTTTCTGTTGAT......................................................................................................................... 24 0 4 237.25 949 884 1 26 37 1 0
...............................................................CGGACGTGGTTATGTTTCTGTTGAT......................................................................................................................... 25 0 4 224.00 896 676 6 154 59 0 1
...........................................................................................................................................................................ACTCCTCCCACTCCCACTCTCCTTT............. 25 0 4 56.00 224 224 0 0 0 0 0
.................................................................GACGTGGTTATGTTTCTGTTGAT......................................................................................................................... 23 0 4 47.50 190 165 2 4 18 1 0
.....................................................................TGGTTATGTTTCTGTTGAT......................................................................................................................... 19 0 4 31.75 127 100 0 11 16 0 0
............................................................................................................................................................................CTCCTCCCACTCCCACTCTCCTTT............. 24 0 4 31.75 127 126 0 1 0 0 0
.................................................................................................................................................................................CCCACTCCCACTCTCCTTTGTCCGGT...... 26 0 4 31.25 125 118 7 0 0 0 0
....................................................................GTGGTTATGTTTCTGTTGAT......................................................................................................................... 20 0 4 27.50 110 97 8 0 5 0 0
.....................................................................................................................TTAGGGTGGTTGTGGTTTTGCT...................................................................... 22 0 12 16.83 202 196 0 0 6 0 0
......................................................................................................................TAGGGTGGTTGTGGTTTTGCT...................................................................... 21 0 12 15.67 188 177 0 0 11 0 0
.............................................................................................................................................................................TCCTCCCACTCCCACTCTCCTTT............. 23 0 4 15.50 62 61 1 0 0 0 0
....................................................................................................................GTTAGGGTGGTTGTGGTTTTGCT...................................................................... 23 0 12 14.83 178 167 0 0 11 0 0
...................................................................................................................................................GGAGTAGCAGTCACCCTCGCTGCT...................................... 24 0 4 13.75 55 55 0 0 0 0 0
.......................................................................................................................AGGGTGGTTGTGGTTTTGCT...................................................................... 20 0 12 13.33 160 109 0 7 44 0 0
..TGGGCAACGCATAGCTTGAACC......................................................................................................................................................................................... 22 0 8 13.13 105 105 0 0 0 0 0
........................................................................................................................................................AGCAGTCACCCTCGCTGCTACTCCT................................ 25 0 4 12.75 51 46 5 0 0 0 0
..................................................................................................................................................................................CCACTCCCACTCTCCTTTGTCCGGT...... 25 0 4 12.50 50 41 9 0 0 0 0
...................................................................................................................GGTTAGGGTGGTTGTGGTTTTGCT...................................................................... 24 0 12 12.42 149 144 0 0 5 0 0
....................................................................ATGGTTATGTTTCTGTTGAT......................................................................................................................... 20 1 4 12.25 49 41 6 1 1 0 0
...................................................................................................................................................................................CACTCCCACTCTCCTTTGTCCGGT...... 24 0 4 12.25 49 45 4 0 0 0 0
................................................................GGACGTGGTTATGTTTCTGTTGA.......................................................................................................................... 23 0 4 12.00 48 48 0 0 0 0 0
...............................................................CGGACGTGGTTATGTTTCTGTTGA.......................................................................................................................... 24 0 4 11.50 46 45 0 1 0 0 0
.......................................................................................................................................................................................CCCACTCTCCTTTGTCCGGTCT.... 22 0 3 10.67 32 16 15 1 0 0 0
.................................................................................................................................................CGGGAGTAGCAGTCACCCTCGCTGCT...................................... 26 0 4 10.00 40 38 2 0 0 0 0
...................................................................CGTGGTTATGTTTCTGTTGAT......................................................................................................................... 21 0 4 9.50 38 35 0 3 0 0 0
........................................................................................................................................................................................CCACTCTCCTTTGTCCGGTCT.... 21 0 3 8.33 25 6 19 0 0 0 0
.................................................................................................................................................................................CCCACTCCCACTCTCCTTTGTCCGGTCT.... 28 0 3 8.00 24 16 8 0 0 0 0
..................................................................................................................................................GGGAGTAGCAGTCACCCTCGCTGCT...................................... 25 0 4 7.75 31 31 0 0 0 0 0
.TTGGGCAACGCATAGCTTGAACC......................................................................................................................................................................................... 23 0 8 7.50 60 59 1 0 0 0 0
..........................................................................................................................................................................TACTCCTCCCACTCCCACTCTCCTTT............. 26 0 4 7.50 30 30 0 0 0 0 0
....................................................................................................................................................................................ACTCCCACTCTCCTTTGTCCGGT...... 23 0 4 7.25 29 27 2 0 0 0 0
......................................................................................................................................................................................TCCCACTCTCCTTTGTCCGGTCT.... 23 0 3 7.00 21 6 15 0 0 0 0
....................................................................................................................................................................................ACTCCCACTCTCCTTTGTCCGGTCT.... 25 0 3 7.00 21 16 5 0 0 0 0
................................................................GGACGTGGTTATGTTGCTGTTGAT......................................................................................................................... 24 1 4 7.00 28 28 0 0 0 0 0
...............................................................CGGACGTGGTTATGTTGCTGTTGAT......................................................................................................................... 25 1 4 6.75 27 27 0 0 0 0 0
..........................................CAGCTAGGCACGGCAACGGGT.................................................................................................................................................. 21 0 4 6.25 25 21 0 4 0 0 0
................................................................GGACGTGGTTATGTTTCTGTTGATCGT...................................................................................................................... 27 0 4 6.25 25 24 0 0 1 0 0
......................................................................GGTTATGTTTCTGTTGAT......................................................................................................................... 18 0 4 6.25 25 22 2 0 1 0 0
.............................................................................................................................................GGTACGGGAGTAGCAGTCACCCTCGC.......................................... 26 0 4 6.00 24 23 0 1 0 0 0
...................................................................................................................................................................................CACTCCCACTCTCCTTTGTCCGGTCT.... 26 0 3 6.00 18 13 4 1 0 0 0
CTTGGGCAACGCATAGCTTGAACC......................................................................................................................................................................................... 24 0 8 6.00 48 47 0 1 0 0 0
................................................................................................................................................ACGGGAGTAGCAGTCACCCTCGCTGCT...................................... 27 0 4 6.00 24 24 0 0 0 0 0
..................................................................ACGTGGTTATGTTTCTGTTGAT......................................................................................................................... 22 0 4 5.75 23 19 0 1 3 0 0
.....................................................................AGGTTATGTTTCTGTTGAT......................................................................................................................... 19 1 4 5.50 22 11 7 2 2 0 0
.............................................................................................................................................GGTACGGGAGTAGCAGTCACCCT............................................. 23 0 4 5.50 22 22 0 0 0 0 0
............................................................................................................................GGTTGTGGTTTTGCTGCGGT................................................................. 20 0 4 5.25 21 10 0 11 0 0 0
....................................................................GTGGTTATGTTTCTGTTGATCGT...................................................................................................................... 23 0 4 5.00 20 20 0 0 0 0 0
..................................................................................................................................................................................CCACTCCCACTCTCCTTTGTCCGGTCT.... 27 0 3 5.00 15 10 5 0 0 0 0
...............................................................CGGACGTGGTTATGTTTCTGTTGATCGT...................................................................................................................... 28 0 4 4.75 19 14 0 0 5 0 0
.........................................................................................................................................................................CTACTCCTCCCACTCCCACTCTCCTTT............. 27 0 4 4.75 19 19 0 0 0 0 0
...........................................................................................................................................GCGGTACGGGAGTAGCAGTCACCCT............................................. 25 0 4 4.50 18 16 0 2 0 0 0
..............................................................................................................................................................................CCTCCCACTCCCACTCTCCTTT............. 22 0 4 4.50 18 18 0 0 0 0 0
...................................................................AATGGTTATGTTTCTGTTGAT......................................................................................................................... 21 2 4 4.25 17 17 0 0 0 0 0
.........................................................................................................................................................GCAGTCACCCTCGCTGCTACTCCT................................ 24 0 4 4.25 17 12 5 0 0 0 0
...............................................................TGGACGTGGTTATGTTTCTGTTGAT......................................................................................................................... 25 1 4 4.25 17 12 3 2 0 0 0
...........................................................................................................................................................................ACTCCTCCCACTCCCACTCTCCTT.............. 24 0 4 4.00 16 16 0 0 0 0 0
............................................................................................................................................................................CTCCTCCCACTCCCACTCTCCTT.............. 23 0 4 4.00 16 16 0 0 0 0 0
.................................................................................................................................................................................CCCACTCCCACTCTCCTTTGTCCGG....... 25 0 4 4.00 16 16 0 0 0 0 0
.............................CAAGCTCGTCGCCCAGCTAGGCAC............................................................................................................................................................ 24 0 5 3.80 19 8 11 0 0 0 0
............................TCAAGCTCGTCGCCCAGCTAGGCAC............................................................................................................................................................ 25 0 5 3.80 19 5 14 0 0 0 0
...............................................................CGGACGTGGTTATGTTACTGTTGAT......................................................................................................................... 25 1 4 3.75 15 15 0 0 0 0 0
....................................GTCGCCCAGCTAGGCACGGCAACGGGT.................................................................................................................................................. 27 0 4 3.75 15 13 2 0 0 0 0
......................................................................................................................................................................................TCCCACTCTCCTTTGTCCGGT...... 21 0 4 3.75 15 10 5 0 0 0 0
.........................................................................................................................................................................................CACTCTCCTTTGTCCGGTCT.... 20 0 3 3.67 11 9 2 0 0 0 0
..............................................................................................................................................................................CCTCCCACTCCCACTCTCCTTTGT........... 24 0 4 3.50 14 13 0 1 0 0 0
...........................................................................................................................................................AGTCACCCTCGCTGCTACTCCT................................ 22 0 4 3.50 14 5 9 0 0 0 0
.............................................................................................................................................................................TCCTCCCACTCCCACTCTCCTTTGT........... 25 0 4 3.50 14 14 0 0 0 0 0
........................................................................................................................................................................GCTACTCCTCCCACTCCCACTCTCCTTT............. 28 0 4 3.50 14 14 0 0 0 0 0
.....................................................................................................................................................................................CTCCCACTCTCCTTTGTCCGGTCT.... 24 0 3 3.33 10 9 1 0 0 0 0
.................................................................................................................GTGGTTAGGGTGGTTGTGGTTTTGCT...................................................................... 26 0 3 3.33 10 9 0 0 1 0 0
......................................CGCCCAGCTAGGCACGGCAACGGGT.................................................................................................................................................. 25 0 4 3.25 13 13 0 0 0 0 0
.......................................................................................................................................................................................CCCACTCTCCTTTGTCCGGT...... 20 0 4 3.25 13 12 1 0 0 0 0
.........................................................................................................................GGTGGTTGTGGTTTTGCT...................................................................... 18 0 12 3.08 37 36 0 1 0 0 0
............................................................................................................................................................GTCACCCTCGCTGCTACTCCT................................ 21 0 7 3.00 21 18 3 0 0 0 0
.....................................................................................................................................................................................CTCCCACTCTCCTTTGTCCGGT...... 22 0 4 3.00 12 12 0 0 0 0 0
.......................................................................................................................................TGCTGCGGTACGGGAGTAGCAGT................................................... 23 0 4 3.00 12 8 0 2 2 0 0
.....................................................................TGGTTATGTTTCTGTTGA.......................................................................................................................... 18 0 4 3.00 12 12 0 0 0 0 0
........................................................................................................................GGGTGGTTGTGGTTTTGCT...................................................................... 19 0 12 2.75 33 29 0 0 4 0 0
......................................................................GGTTATGTTTCTGTTGATCGTTGT................................................................................................................... 24 0 4 2.75 11 9 0 0 2 0 0
...................................................................CGTGGTTATGTTTCTGTTGATCGT...................................................................................................................... 24 0 4 2.75 11 10 0 1 0 0 0
.......................................................................................................................................................................................CCCACTCTCCTTTGTCCGGTCTGCT. 25 0 3 2.67 8 8 0 0 0 0 0
...................................................................................................................................................................................AACTCCCACTCTCCTTTGTCCGGTCT.... 26 1 3 2.67 8 8 0 0 0 0 0
....................................................................AAGGTTATGTTTCTGTTGAT......................................................................................................................... 20 2 6 2.67 16 16 0 0 0 0 0
..............................................................................................................................................GTACGGGAGTAGCAGTCACCCT............................................. 22 0 4 2.50 10 9 1 0 0 0 0
...................................................................................................................................................GGAGTAGCAGTCACCCTCGCTGC....................................... 23 0 4 2.50 10 10 0 0 0 0 0
...........................................AGCTAGGCACGGCAACGGGT.................................................................................................................................................. 20 0 4 2.50 10 10 0 0 0 0 0
..............................................................................................................................................GTACGGGAGTAGCAGTCACCCTCGC.......................................... 25 0 4 2.50 10 10 0 0 0 0 0
..TGGGCAACGCATAGCTTGAACCAAGCT.................................................................................................................................................................................... 27 0 7 2.29 16 16 0 0 0 0 0
...GGGCAACGCATAGCTTGAACC......................................................................................................................................................................................... 21 0 11 2.27 25 25 0 0 0 0 0
............................................................................................................................................CGGTACGGGAGTAGCAGTCACCCT............................................. 24 0 4 2.25 9 9 0 0 0 0 0
..........................................................................................................................................TGCGGTACGGGAGTAGCAGTCACCCT............................................. 26 0 4 2.25 9 9 0 0 0 0 0
................................................................GGACGTGGTTATGTTACTGTTGAT......................................................................................................................... 24 1 4 2.25 9 9 0 0 0 0 0
..TGGGCAACGCATAGCTTGAAC.......................................................................................................................................................................................... 21 0 8 2.25 18 17 0 0 1 0 0
.....................................TCGCCCAGCTAGGCACGGCAACGGGT.................................................................................................................................................. 26 0 4 2.25 9 9 0 0 0 0 0
...........................................................................................................................................................................ACTCCTCCCACTCCCAGTCTCCTTT............. 25 1 4 2.25 9 9 0 0 0 0 0
.............................................................................................................................GTTGTGGTTTTGCTGCGGT................................................................. 19 0 4 2.25 9 9 0 0 0 0 0
.......................................GCCCAGCTAGGCACGGCAACGGGT.................................................................................................................................................. 24 0 4 2.25 9 9 0 0 0 0 0
..................................................................AAATGGTTATGTTTCTGTTGAT......................................................................................................................... 22 2 4 2.25 9 9 0 0 0 0 0
..............................................................TCGGACGTGGTTATGTTTCTGTTGAT......................................................................................................................... 26 0 4 2.25 9 9 0 0 0 0 0
..................................................................................................................................GGTTTTGCTGCGGTACGGGAGT......................................................... 22 0 4 2.25 9 3 1 2 3 0 0
....................................................................GTGGTTATGTTTCTGTTGATCGTTGT................................................................................................................... 26 0 4 2.00 8 8 0 0 0 0 0
....................................................................GTGGTTATGTTTCTGTTGA.......................................................................................................................... 19 0 4 2.00 8 8 0 0 0 0 0
.................................................................GACGTGGTTATGTTTCTGTTGATCGT...................................................................................................................... 26 0 4 2.00 8 7 0 0 1 0 0
.......................................................................................................................................................................TGCTACTCCTCCCACTCCCACTCTCCTTT............. 29 0 4 2.00 8 8 0 0 0 0 0
..................................................................................................................................................................................CCACTCCCACTCTCCTTTGTCCGG....... 24 0 4 2.00 8 8 0 0 0 0 0
...................GAACCAAGCTCAAGCTCGTCGCCCA..................................................................................................................................................................... 25 0 5 2.00 10 0 10 0 0 0 0
.................TTGAACCAAGCTCAAGCTCGTCGCCCA..................................................................................................................................................................... 27 0 5 2.00 10 0 10 0 0 0 0
............................................................................................................................................................................CTCCTCCCACTCCCAGTCTCCTTT............. 24 1 4 2.00 8 8 0 0 0 0 0
.........................................................................................................................................CTGCGGTACGGGAGTAGCAGT................................................... 21 0 7 2.00 14 12 0 2 0 0 0
............................................................................................GTTGTGTTGGCGTTAGTGGT................................................................................................. 20 0 3 2.00 6 5 0 0 1 0 0
.....................................................................................................................TTAGGGTGGTTGTGGTTTTGC....................................................................... 21 0 12 1.92 23 23 0 0 0 0 0
...............................................................CGGACGTGGTTATGTTCCTGTTGAT......................................................................................................................... 25 1 4 1.75 7 7 0 0 0 0 0
..........................................................................................................................................................................TACTCCTCCCACTCCCACTCTCCTT.............. 25 0 4 1.75 7 7 0 0 0 0 0
................................................................................................................................................ACGGGAGTAGCAGTCACCCTCGCT......................................... 24 0 4 1.75 7 7 0 0 0 0 0
.............................................................................................................................................GGTACGGGAGTAGCAGTCACCCTCGCT......................................... 27 0 4 1.75 7 7 0 0 0 0 0
...................................................................AGTGGTTATGTTTCTGTTGAT......................................................................................................................... 21 1 4 1.75 7 6 0 1 0 0 0
......................................................................................ATCGTTGTTGTGTTGGCGTTAGT.................................................................................................... 23 0 4 1.75 7 6 0 0 1 0 0
...................................................................................................................................GTTTTGCTGCGGTACGGGAGT......................................................... 21 0 4 1.75 7 6 0 1 0 0 0
................................................................GGACGTGGTTATGTTTCTGTTGATC........................................................................................................................ 25 0 4 1.75 7 7 0 0 0 0 0
................................................................TGACGTGGTTATGTTTCTGTTGAT......................................................................................................................... 24 1 4 1.75 7 5 1 0 1 0 0
..................................................................................................................TGGTTAGGGTGGTTGTGGTTTTGCT...................................................................... 25 0 4 1.75 7 3 0 0 4 0 0
.........................................ACAGCTAGGCACGGCAACGGGT.................................................................................................................................................. 22 1 4 1.75 7 7 0 0 0 0 0
........................................................................................CGTTGTTGTGTTGGCGTTAGT.................................................................................................... 21 0 4 1.75 7 3 0 1 3 0 0
.............................................................................................................................................................................TCCTCCCACTCCCACTCTCCTT.............. 22 0 4 1.75 7 7 0 0 0 0 0
.............................................................GTCGGACGTGGTTATGTTTCTGTTGAT......................................................................................................................... 27 0 4 1.75 7 7 0 0 0 0 0
.........................................................................................................................................................................................AACTCTCCTTTGTCCGGTCT.... 20 1 3 1.67 5 3 2 0 0 0 0
.............................................................................................................GGTGGTGGTTAGGGTGGTTGTGGT............................................................................ 24 0 3 1.67 5 2 0 0 3 0 0
.........................................................................................................................GGTGGTTGTGGTTTTGCTGCGGT................................................................. 23 0 4 1.50 6 5 0 1 0 0 0
.........................................CCAGCTAGGCACGGCAACGGGT.................................................................................................................................................. 22 0 4 1.50 6 6 0 0 0 0 0
.........................................................................................GTTGTTGTGTTGGCGTTAGT.................................................................................................... 20 0 4 1.50 6 3 0 0 3 0 0
......................................................................................................................................................GTAGCAGTCACCCTCGCTGCT...................................... 21 0 4 1.50 6 6 0 0 0 0 0
.................................................................GACGTGGTTATGTTTCTGTTGA.......................................................................................................................... 22 0 4 1.50 6 6 0 0 0 0 0
................................................................GGACGTGGTTATGTTCCTGTTGAT......................................................................................................................... 24 1 4 1.50 6 6 0 0 0 0 0
.....................................................................................................................................TTTGCTGCGGTACGGGAGTAGCAGT................................................... 25 0 4 1.50 6 6 0 0 0 0 0
......................................................................................................................................TTGCTGCGGTACGGGAGTAGCAGT................................................... 24 0 4 1.50 6 6 0 0 0 0 0
................................................................................................................GGTGGTTAGGGTGGTTGTGGT............................................................................ 21 0 6 1.50 9 6 0 0 3 0 0
................................................................GGACGTGGTTATGTTTCTGTTGAG......................................................................................................................... 24 1 4 1.50 6 6 0 0 0 0 0
.....................................................GGCAACGGGTCGGACGTGGTTAT..................................................................................................................................... 23 0 4 1.50 6 5 0 1 0 0 0
.................................................................GACGTGGTTATGTTGCTGTTGAT......................................................................................................................... 23 1 4 1.50 6 6 0 0 0 0 0
.............................................................................................................................................GGTACGGGAGTAGCAGTCACC............................................... 21 0 4 1.50 6 5 0 1 0 0 0
........................................................................................................................................................AGCAGTCACCCTCGCTGCTACTCC................................. 24 0 4 1.50 6 6 0 0 0 0 0
................................................................................................................................................................................TCCCACTCCCACTCTCCTTTGT........... 22 0 4 1.50 6 6 0 0 0 0 0
...............................................................................................................................................................................CTCCCACTCCCACTCTCCTTTGT........... 23 0 4 1.50 6 5 0 1 0 0 0
.......................CAAGCTCAAGCTCGTCGCCCAGCT.................................................................................................................................................................. 24 0 5 1.40 7 3 4 0 0 0 0
.......................CAAGCTCAAGCTCGTCGCCCAGCTA................................................................................................................................................................. 25 0 5 1.40 7 1 6 0 0 0 0
........ACGCATAGCTTGAACCAAGCTCAAGCT.............................................................................................................................................................................. 27 0 5 1.40 7 7 0 0 0 0 0
......................................................................................................................TAGGGTGGTTGTGGTTTTGC....................................................................... 20 0 12 1.33 16 16 0 0 0 0 0
................................................................................................................GGTGGTTAGGGTGGTTGTGGTTTTGCT...................................................................... 27 0 3 1.33 4 1 0 0 3 0 0
.............................................................................................................GGTGGTGGTTAGGGTGGTT................................................................................. 19 0 3 1.33 4 4 0 0 0 0 0
.........................................................................................CTTGTTGTGTTGGCGTTAGTGGT................................................................................................. 23 1 3 1.33 4 0 0 0 4 0 0
................................................................AGACGTGGTTATGTTTCTGTTGAT......................................................................................................................... 24 1 4 1.25 5 5 0 0 0 0 0
.......................................................................................................................................................................TGCTACTCCTCCCACTCCCACTCTCCT............... 27 0 4 1.25 5 4 0 1 0 0 0
..............................................................................................................................................GTACGGGAGTAGCAGTCACCCTCGCT......................................... 26 0 4 1.25 5 5 0 0 0 0 0
............................................................................................................................................................................CTCCTCCCACTCCCAATCTCCTTT............. 24 1 4 1.25 5 5 0 0 0 0 0
.................................................................GACGTGGTTATGTTACTGTTGAT......................................................................................................................... 23 1 4 1.25 5 5 0 0 0 0 0
.................................................................................................................................................................................CCCACTCCCACTCTCCTTTGTCCGGTC..... 27 0 4 1.25 5 2 3 0 0 0 0
...............................................................CGGACGTGGTTATGTTTCTGTTG........................................................................................................................... 23 0 4 1.25 5 4 0 1 0 0 0
...............................................................................................................................................TACGGGAGTAGCAGTCACCCTCGCT......................................... 25 0 4 1.25 5 5 0 0 0 0 0
............................................................................................................................................CGGTACGGGAGTAGCAGTCACC............................................... 22 0 4 1.25 5 5 0 0 0 0 0
............................................................................................................................................................................CTCCTCCCACTCCCACTCTCCTTTGT........... 26 0 4 1.25 5 5 0 0 0 0 0
....................................................................GTGGTTATGTTGCTGTTGAT......................................................................................................................... 20 1 4 1.25 5 5 0 0 0 0 0
.....................................................................TGGTTATGTTTCTGTTGATCGT...................................................................................................................... 22 0 4 1.25 5 4 0 0 1 0 0
................................................................GGGCGTGGTTATGTTTCTGTTGAT......................................................................................................................... 24 1 4 1.25 5 5 0 0 0 0 0
........................................................................................................................................................................GCTACTCCTCCCACTCCCACTCTCCT............... 26 0 4 1.25 5 5 0 0 0 0 0
..........................................................................................................................................................................CACTCCTCCCACTCCCACTCTCCTTT............. 26 1 4 1.25 5 5 0 0 0 0 0
....................................................................................................................GTTAGGGTGGTTGTGGTTTTGC....................................................................... 22 0 12 1.08 13 13 0 0 0 0 0
.........................................................................................................................................CTGCGGTACGGGAGTAGCAGTCACC............................................... 25 0 4 1.00 4 4 0 0 0 0 0
....................................................CGGCAACGGGTCGGACGTGGTTAT..................................................................................................................................... 24 0 4 1.00 4 4 0 0 0 0 0
............................................................................................................................................................................CTCCTCCCACTCCCATTCTCCTTT............. 24 1 4 1.00 4 4 0 0 0 0 0
..........................................................................................................................................................................TACTCCTCCCACTCCCACTCTCCT............... 24 0 4 1.00 4 4 0 0 0 0 0
...............................................................................................................................................................................CTCCCACTCCCACTCTCCTTT............. 21 0 4 1.00 4 4 0 0 0 0 0
..................................................................................................................TGGTTAGGGTGGTTGTGGT............................................................................ 19 0 7 1.00 7 7 0 0 0 0 0
.......................................................................................................................................................................TGCTACTCCTCCCACTCCCACTCTC................. 25 0 4 1.00 4 2 2 0 0 0 0
...................................................................................................................GGTTAGGGTGGTTGTGGTTTTGC....................................................................... 23 0 12 1.00 12 12 0 0 0 0 0
..................TGAACCAAGCTCAAGCTCGTCGCCCA..................................................................................................................................................................... 26 0 5 1.00 5 0 5 0 0 0 0
...............................................................................................GTGTTGGCGTTAGTGGTGGTGGT........................................................................................... 23 0 3 1.00 3 3 0 0 0 0 0
..................................................................................................................................................GGGAGTAGCAGTCACCCTCGCTGC....................................... 24 0 4 1.00 4 4 0 0 0 0 0
...................................................................................................................................................................................AACTCCCACTCTCCTTTGTCCGGT...... 24 1 4 1.00 4 4 0 0 0 0 0
.........................................................................................GTTGTTGTGTTGGCGTTAGTGGT................................................................................................. 23 0 3 1.00 3 1 0 0 2 0 0
.....................................................................................GATCGTTGTTGTGTTGGCGTTAGT.................................................................................................... 24 0 4 1.00 4 3 0 0 1 0 0
...........................................................................................................................................................................ACTCCTCCCACTCCCACTCTCCTTTGT........... 27 0 4 1.00 4 4 0 0 0 0 0
.........................................................................................................................................................................CTACTCCTCCCACTCCCACTCTCCTT.............. 26 0 4 1.00 4 4 0 0 0 0 0
...........................................................................................................................TGGTTGTGGTTTTGCTGCGGT................................................................. 21 0 4 1.00 4 3 0 0 1 0 0
........................................................................................................................................................................................AAACTCTCCTTTGTCCGGTCT.... 21 2 3 1.00 3 1 2 0 0 0 0
........................................................................................................................................................................................CCACTCTCCTTTGTCCGGT...... 19 0 4 1.00 4 3 1 0 0 0 0
.......................................................................................................................................................AAGCAGTCACCCTCGCTGCTACTCCT................................ 26 1 4 1.00 4 4 0 0 0 0 0
.............................................................................................................................................................................TCCTCCCACTCCCAGTCTCCTTT............. 23 1 4 1.00 4 4 0 0 0 0 0
...................................................................................................................................................GGAGTAGCAGTCACCCTCGC.......................................... 20 0 4 1.00 4 3 0 1 0 0 0
...................................................................................................................................................AGAGTAGCAGTCACCCTCGCTGCT...................................... 24 1 4 1.00 4 4 0 0 0 0 0
...................................................................................................................................................GGAGTAGCAGTCACCCTCGCT......................................... 21 0 4 1.00 4 4 0 0 0 0 0
...............................................................CGTACGTGGTTATGTTTCTGTTGAT......................................................................................................................... 25 1 4 1.00 4 1 0 3 0 0 0
...................GAACCAAGCTCAAGCTCGTCGCCC...................................................................................................................................................................... 24 0 5 1.00 5 3 2 0 0 0 0
.......................CAAGCTCAAGCTCGTCGCCCAGC................................................................................................................................................................... 23 0 5 1.00 5 0 5 0 0 0 0
......................................................................................................................................................................................CCCCACTCTCCTTTGTCCGGTCT.... 23 1 3 1.00 3 0 3 0 0 0 0
................CTTGAACCAAGCTCAAGCTCGTCGC........................................................................................................................................................................ 25 0 5 1.00 5 2 3 0 0 0 0
......................................................................................................................................................................................TCCCACTCTCCTTTGTCCGGTC..... 22 0 4 1.00 4 4 0 0 0 0 0
.............................................................................................................................................................TCACCCTCGCTGCTACTCCT................................ 20 0 7 0.86 6 1 5 0 0 0 0
.........................................................................................................................................TTGCGGTACGGGAGTAGCAGT................................................... 21 1 7 0.86 6 6 0 0 0 0 0
.................................................................................................................GTGGTTAGGGTGGTTGTGGT............................................................................ 20 0 6 0.83 5 5 0 0 0 0 0
...............................................................CGGACGTGGTTATGTTTCTGT............................................................................................................................. 21 0 5 0.80 4 4 0 0 0 0 0
...............................................................CGGACGTGGTTATGTTTCTGTT............................................................................................................................ 22 0 5 0.80 4 2 0 2 0 0 0
......................CCAAGCTCAAGCTCGTCGCCCAGC................................................................................................................................................................... 24 0 5 0.80 4 0 4 0 0 0 0
...................GAACCAAGCTCAAGCTCGTCGCCCAGC................................................................................................................................................................... 27 0 5 0.80 4 1 3 0 0 0 0
.........................................................................................................................................................ACAGTCACCCTCGCTGCTACTCC................................. 23 1 4 0.75 3 0 3 0 0 0 0
..................................................................................................................................................................................AAACTCCCACTCTCCTTTGTCCGGT...... 25 2 4 0.75 3 3 0 0 0 0 0
..............................................................................................................................TTGTGGTTTTGCTGCGGT................................................................. 18 0 4 0.75 3 3 0 0 0 0 0
......................................................................................................................................................................CTGCTACTCCTCCCACTCCCACTCT.................. 25 0 4 0.75 3 3 0 0 0 0 0
......................................................................................................................................................................CTGCTACTCCTCCCACTCCCACT.................... 23 0 4 0.75 3 3 0 0 0 0 0
..................................................................................................................................................GGGAGTAGCAGTCACCCTCGCT......................................... 22 0 4 0.75 3 3 0 0 0 0 0
....................................................................ATGGTTATGTTTCTGTTGA.......................................................................................................................... 19 1 4 0.75 3 3 0 0 0 0 0
...................................................................CGTGGTTATGTTACTGTTGAT......................................................................................................................... 21 1 4 0.75 3 3 0 0 0 0 0
...GGGCAACGCATAGCTTGAACCAAGCT.................................................................................................................................................................................... 26 0 8 0.75 6 6 0 0 0 0 0
...............................................................CGGACGTGGTTATTTTTCTGTTGAT......................................................................................................................... 25 1 4 0.75 3 3 0 0 0 0 0
.......................................................................................................................................................TAGCAGTCACCCTCGCTGCTACTCCT................................ 26 0 4 0.75 3 1 2 0 0 0 0
...............................................................CGGACGTGGTTATGTTTCTGTTGAG......................................................................................................................... 25 1 4 0.75 3 3 0 0 0 0 0
....................................................................GTGGTTATTTTTCTGTTGAT......................................................................................................................... 20 1 4 0.75 3 0 3 0 0 0 0
.................................................................GACGTGGTTATGTTCCTGTTGAT......................................................................................................................... 23 1 4 0.75 3 3 0 0 0 0 0
................................................................................................................................................ACGGGAGTAGCAGTCACCCTCGCTG........................................ 25 0 4 0.75 3 3 0 0 0 0 0
.............................................................................................................................................GGTACGGGAGTAGCAGTCACCCTCG........................................... 25 0 4 0.75 3 3 0 0 0 0 0
..........................................................................................................................ATGGTTGTGGTTTTGCTGCGGT................................................................. 22 1 4 0.75 3 3 0 0 0 0 0
....................................................................................................................................................GAGTAGCAGTCACCCTCGCTGCT...................................... 23 0 4 0.75 3 3 0 0 0 0 0
...................................CGTCGCCCAGCTAGGCACGGCAACGGGT.................................................................................................................................................. 28 0 4 0.75 3 3 0 0 0 0 0
.................................................................................................................................................CGGGAGTAGCAGTCACCCTCGCT......................................... 23 0 4 0.75 3 3 0 0 0 0 0
.................................CTCGTCGCCCAGCTAGGCACGGCAA....................................................................................................................................................... 25 0 4 0.75 3 3 0 0 0 0 0
.......................................................................................................................................................................................CCCACTCTCCTTTGTCCGGTC..... 21 0 4 0.75 3 2 1 0 0 0 0
..........................................................................................................................................................................AACTCCTCCCACTCCCACTCTCCTTT............. 26 1 4 0.75 3 3 0 0 0 0 0
................................................................................................................................................ACGGGAGTAGCAGTCACCCT............................................. 20 0 4 0.75 3 3 0 0 0 0 0
.....................................................GGCAACGGGTCGGACGTGGTTATGT................................................................................................................................... 25 0 4 0.75 3 3 0 0 0 0 0
............................................................................................................................................................................CTCCTCCCACTCCCACTCTCCT............... 22 0 4 0.75 3 3 0 0 0 0 0
.................................................................................................................................................CGGGAGTAGCAGTCACCCTCGC.......................................... 22 0 4 0.75 3 3 0 0 0 0 0
................................................................................................................................GTGGTTTTGCTGCGGTACGGGAGT......................................................... 24 0 4 0.75 3 2 0 1 0 0 0
....................................................................TTGGTTATGTTTCTGTTGAT......................................................................................................................... 20 1 4 0.75 3 3 0 0 0 0 0
...........................................................................................................................................................................ACTCCTCCCACTCCCACTCTCCTTTG............ 26 0 4 0.75 3 3 0 0 0 0 0
....................................................................GTGGTTATGTTTCTGTTGATCG....................................................................................................................... 22 0 4 0.75 3 3 0 0 0 0 0
...............................................................AGGACGTGGTTATGTTTCTGTTGAT......................................................................................................................... 25 1 4 0.75 3 3 0 0 0 0 0
.................................................................................................................................................CGGGAGTAGCAGTCACCCTCGCTGC....................................... 25 0 4 0.75 3 2 1 0 0 0 0
........................................CCCAGCTAGGCACGGCAACGGGT.................................................................................................................................................. 23 0 4 0.75 3 3 0 0 0 0 0
.........................................................................................................................................CTGCGGTACGGGAGTAGCAGTCACCCT............................................. 27 0 4 0.75 3 3 0 0 0 0 0
..............................................................................TTCTGTTGATCGTTGTTGTGTTGGCGT........................................................................................................ 27 0 4 0.75 3 3 0 0 0 0 0
....................................................................................................................................................................CGCTGCTACTCCTCCCACTCCCACTC................... 26 0 4 0.75 3 3 0 0 0 0 0
.....................................................................................................................................................................GCTGCTACTCCTCCCACTCCCACT.................... 24 0 4 0.75 3 3 0 0 0 0 0
...........................................................................................................................................................................ACTCCTCCCACTCCCACTCTCCT............... 23 0 4 0.75 3 3 0 0 0 0 0
CTTGGGCAACGCATAGCTTGAAC.......................................................................................................................................................................................... 23 0 8 0.75 6 6 0 0 0 0 0
...................................................................................................................GGTTAGGGTGGTTGTGGT............................................................................ 18 0 15 0.73 11 8 0 1 2 0 0
....GGCAACGCATAGCTTGAACC......................................................................................................................................................................................... 20 0 11 0.73 8 8 0 0 0 0 0
.TTGGGCAACGCATAGCTTGAACCAAGCT.................................................................................................................................................................................... 28 0 7 0.71 5 5 0 0 0 0 0
.................................................................................................................GTGGTTAGGGTGGTTGTGGTT........................................................................... 21 0 3 0.67 2 2 0 0 0 0 0
........................................................................................................................................................................................ACACTCTCCTTTGTCCGGTCT.... 21 1 3 0.67 2 2 0 0 0 0 0
.....................................................................................................................ATAGGGTGGTTGTGGTTTTGCT...................................................................... 22 1 12 0.67 8 8 0 0 0 0 0
..........................................................................................TTGTTGTGTTGGCGTTAGTGGT................................................................................................. 22 0 3 0.67 2 2 0 0 0 0 0
.........................................................................................TTTGTTGTGTTGGCGTTAGTGGT................................................................................................. 23 1 3 0.67 2 2 0 0 0 0 0
.................................................................................................................................................................................AACACTCCCACTCTCCTTTGTCCGGTCT.... 28 2 3 0.67 2 0 2 0 0 0 0
.............................................................................................................GGTGGTGGTTAGGGTGGT.................................................................................. 18 0 3 0.67 2 2 0 0 0 0 0
.......................................................................................................................AGGGTGGTTGTGGTTTTGC....................................................................... 19 0 12 0.67 8 7 0 0 1 0 0
................................................................................................................GGTGGTTAGGGTGGTTGTGGTT........................................................................... 22 0 3 0.67 2 1 0 0 1 0 0
..................................................................................................................................................................................ACACTCCCACTCTCCTTTGTCCGGTCT.... 27 1 3 0.67 2 2 0 0 0 0 0
.................................................................................................................GTGGTTAGGGTGGTTGTGGTTT.......................................................................... 22 0 3 0.67 2 2 0 0 0 0 0
.............................................................................................................................................GGTACGGGAGTAGCAGTCAC................................................ 20 0 8 0.63 5 4 0 1 0 0 0
...................GAACCAAGCTCAAGCTCGTCGCCCAGCT.................................................................................................................................................................. 28 0 5 0.60 3 3 0 0 0 0 0
..................TGAACCAAGCTCAAGCTCGTCGC........................................................................................................................................................................ 23 0 5 0.60 3 1 2 0 0 0 0
.................TTGAACCAAGCTCAAGCTCGTCGC........................................................................................................................................................................ 24 0 5 0.60 3 3 0 0 0 0 0
..................TGAACCAAGCTCAAGCTCGTCGCCC...................................................................................................................................................................... 25 0 5 0.60 3 1 2 0 0 0 0
..........................................................CGGGTCGGACGTGGTTAT..................................................................................................................................... 18 0 5 0.60 3 0 3 0 0 0 0
...........................................................GGGTCGGACGTGGTTATGTTTCT............................................................................................................................... 23 0 5 0.60 3 3 0 0 0 0 0
............................................................GGTCGGACGTGGTTATGTTTCTGT............................................................................................................................. 24 0 5 0.60 3 3 0 0 0 0 0
..................TGAACCAAGCTCAAGCTCGTCGCCCAG.................................................................................................................................................................... 27 0 5 0.60 3 0 3 0 0 0 0
................................................................GGACGTGGTTATGTTTCTG.............................................................................................................................. 19 0 5 0.60 3 2 0 1 0 0 0
.................TTGAACCAAGCTCAAGCTCGTCGCCC...................................................................................................................................................................... 26 0 5 0.60 3 2 1 0 0 0 0
........ACGCATAGCTTGAACCAAGCTCAAG................................................................................................................................................................................ 25 0 5 0.60 3 3 0 0 0 0 0
.............................................................GTCGGACGTGGTTATGTTTCTGT............................................................................................................................. 23 0 5 0.60 3 3 0 0 0 0 0
...........................................................................................................................................GCGGTACGGGAGTAGCAGT................................................... 19 0 7 0.57 4 2 0 0 2 0 0
............................................................................................................................................................GTCACCCTCGCTGCTACTCC................................. 20 0 7 0.57 4 4 0 0 0 0 0
..........................................................................................................................................TGCGGTACGGGAGTAGCAGT................................................... 20 0 7 0.57 4 3 0 0 1 0 0
.........................................................................................................................................................GCAGTCACCCTCGCTGCTACTCC................................. 23 0 4 0.50 2 2 0 0 0 0 0
.........................................................................................................................................................................................CACTCTCCTTTGTCCGGT...... 18 0 4 0.50 2 1 1 0 0 0 0
........................................................................................................................GGGTGGTTGTGGTTTTGCTGCGGT................................................................. 24 0 4 0.50 2 2 0 0 0 0 0
.................................................................................................................................................................................CCAACTCCCACTCTCCTTTGTCCGGT...... 26 1 4 0.50 2 2 0 0 0 0 0
...........................................................................................................................................................................ACTCCTCCCACTCCCAATCTCCTTT............. 25 1 4 0.50 2 2 0 0 0 0 0
...........................................................................................................................................................AGTCACCCTCGCTGCTACTCCTCCCACT.......................... 28 0 4 0.50 2 0 2 0 0 0 0
.......................................................................GTTATGTTTCTGTTGATCGTTGT................................................................................................................... 23 0 4 0.50 2 2 0 0 0 0 0
................................................................GGCCGTGGTTATGTTTCTGTTGAT......................................................................................................................... 24 1 4 0.50 2 0 0 2 0 0 0
................................................................GGACGTGGTTATGTGTCTGTTGA.......................................................................................................................... 23 1 4 0.50 2 2 0 0 0 0 0
..........................................................................................TTGTTGTGTTGGCGTTAGT.................................................................................................... 19 0 4 0.50 2 2 0 0 0 0 0
...............................................................CGGACGTGGTTATGTTTCTGTTGATG........................................................................................................................ 26 1 4 0.50 2 2 0 0 0 0 0
.......................................................................................................................................................................TGCTACTCCTCCCACTCCCACTCTCCTT.............. 28 0 4 0.50 2 2 0 0 0 0 0
...................................................................TGTGGTTATGTTTCTGTTGAT......................................................................................................................... 21 1 4 0.50 2 2 0 0 0 0 0
..............................................................................................................................................ATACGGGAGTAGCAGTCACCCT............................................. 22 1 4 0.50 2 2 0 0 0 0 0
...................................................................................AAGATCGTTGTTGTGTTGGCGTT....................................................................................................... 23 2 4 0.50 2 2 0 0 0 0 0
.................................................................................................................................................CGGGAGTAGCAGTCACCCTCGCTG........................................ 24 0 4 0.50 2 0 2 0 0 0 0
.................................................................AAAATGGTTATGTTTCTGTTGAT......................................................................................................................... 23 3 4 0.50 2 2 0 0 0 0 0
.....................................................................................................................................................................................CTCCCACTCTCCTGTGTCCGGT...... 22 1 4 0.50 2 2 0 0 0 0 0
...............................................................CAGACGTGGTTATGTTTCTGTTGAT......................................................................................................................... 25 1 4 0.50 2 1 0 1 0 0 0
...........................................TGCTAGGCACGGCAACGGGT.................................................................................................................................................. 20 1 4 0.50 2 2 0 0 0 0 0
.......................................................................................................................................TGCTGCGGTACGGGAGTAGCAGTCACC............................................... 27 0 4 0.50 2 1 0 0 1 0 0
..............................................................................................................................................GTACGGGAGTAGCAGTCACCCTCG........................................... 24 0 4 0.50 2 2 0 0 0 0 0
............................................................................................................................................CGGTACGGGAGTAGCAGTCACCCTCGCT......................................... 28 0 4 0.50 2 2 0 0 0 0 0
.........................................................................................................................................................................................CACTCTCCTTTGTCCGGTC..... 19 0 4 0.50 2 1 1 0 0 0 0
.....................................................GGCAACGGGTCGGACGTGGTT....................................................................................................................................... 21 0 4 0.50 2 2 0 0 0 0 0
...........................................................................................................................................ACGGTACGGGAGTAGCAGTCACCCTCGC.......................................... 28 1 4 0.50 2 2 0 0 0 0 0
..........................................................................................................................................TGCGGTACGGGAGTAGCAGTCACCC.............................................. 25 0 4 0.50 2 2 0 0 0 0 0
.......................................................................................TCGTTGTTGTGTTGGCGTTAGT.................................................................................................... 22 0 4 0.50 2 2 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_296:24353-24561 - dpe_1332 GAACCC----------------------------GTTGCGTATCGAACTTGGTTCGAGTTCGAGCAGCGGGTCGATCCGTGCCGTTGC-----------------------------CCAGCCTGCACCAATACAAAGACAACTAGCAA------------------------CAACA-----------CAACCGC---------------------------------------------------------------AATC-----------ACC---ACCACCAATCCCA--------------------------------CCA---AC--------------------ACCAAAACGACGCCATGCCCT-------CATCGTCAGTGGGAGCGACGAT-------------------------------------------------------------------------------------------------------------------------------------------G----AG--G---AG------GGTGAGGGTGAGAGGAAACAGGCCAGACGAC
dp5 Unknown_group_764:2643-2851 + GAGCCC----------------------------GTTGCGAATCGAACTTGGTTCGAGCTCGAGCGGCGGGTCGATCCGTGCCGTTGT-----------------------------CCAGCCAACACCAATACCACGACAACCAGCAA------------------------CTACA----------------------A---------------------------------------------------------------AACCACAACCACAAATACCACCA---------------------------ACA-----ACAGCA---AC--------------------CCCAAAACGACGCCGCGCCCT-------CATCGACAATGGGAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GATGAGGGTGAGAGGAAGCAGGCCAGACGAC
droWil2 scf2_1100000004515:3771642-3771813 - GCAAC----------------------------------------------------------------------------------------------------------------------------------------------------AACAACAACAGCACCAGCAGCAACA-------------------TCAATCACAACAACAACAACAAC------------------------------------------------------------------------CTC---------------------AGCATGATAGTTGCAACAA---------------TAA----------------------------TAACAACAACAACAAC---------AGCAATAATAGTGCTAGC---AGCAGC---------------------------AG------------------------------------------------------------CTCACA---AAG---TAGTCT----CGACG---ATGATGAC------GATGA-CGATGAAGAGGAAGACGAT
droVir3 scaffold_13049:3412766-3412941 + TGCCGC----------------------------------------------------------------------------------------------------TGCCCCATCAT------AGTAGCAGTAGCAGTAGCAGTAGCAG------------------------TAACA----------GTAGCAAT---------------------------------------------------------------AATC-----------ATC---ATCATCATCATCATC------------------AACA-----ACAA-------------------------------------------------------------------------------------------------C---AACAAC---------------------------AACATGCAGCCTCGCTGGGCGGA-AGCGGAAGTGGAAATGGAAATGGCAATGGAAATGGCTTT-------GC-------------------------------------------TGCAGCTGTCCTAGACAAC
droMoj3 scaffold_6540:19735084-19735260 - GGACGT----------------------------GTCGCGCGTCCAAGTTAGCAAATTGGCGAGTAGTAGGCGCAC-CAGGCAGCTGC-----------------------------CAA---------------------------------------------------------------------------------GCACAACCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACACAACCGATAGGAGCAAAGGATAACGCACGACTGTGCCACACGAACAGCGACAA---------------------------------------TGAC---G-ACGCCGAC---GAGAACGACGAC------GACGA-CGGCGCCGATGAGGACGAC
droGri2 scaffold_7266:3082-3235 - GAGCGG---CGGGCGC----------AGTGGTGC------------------------------------------------------TAACACACGCT------------------CTGGCCAGCAGCAGCAGCAGCAGCATCAGCAG------------------------CAGCG----------------------G---------------------------------------------------------------CAGCGGCAGCATCAGCAGCAGCA---GC------------------------ATCA-----GCAGCAGCAAAAACGGCAGCA------------------------CCT----------------------AC------AGCAGCAGCAGCAGCAGCAGC---AGCAGC---------------------------AG------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13117:3550027-3550202 - GCA-----------------------------------------------------------------------------------------GGTCGGTGCTCCGCCGCCCACAAAC------AACAACAACAACAACAACAGTAGCAA------------------------CAACA----------------------A---------------------------------------------------------------CAGCAGCAGTAACAGTAGCAACA---GC------------------------AACA-----ACAACAGCAACAACAGCAGCAGCAACAA----------------------------CAACAACAGTAGCAGCAGCAAC---------AACAATAGTAGC---AATAAC---------------------------AA------------------------------------------------------------CACACC-------------------------------------------------------AAACGGTGCAC
droKik1 scf7180000302351:236929-237036 + CCGCTG---CCTATACCC-------------------------------------------------------------------------ATGTCG---------------------------------GCACAAGGATC-GCCGCAACAGCAACATCATCATCACCAGCAGCAGCA----------------------------------------------------------------------------------------------------------------CCACCAGCATCATCATCATCATCAGCA-----GCAG-------------------------------------------------------------------------------------------------C---AACAAC---------------------------AA------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453782:591906-592048 + CATTGC--------------------------------------------------------------------------------------------------------------------------------TAAGACCAGCAGCAG------------------------CAACA-------------------------------------------------------------------------GCAACAACAATC-----------GCA----------------------------------------------------------------------------------------------------------------------ACTACCAA---------ATGGATTCCAAT---CAAAACCAAATACAAA---------------------TGGAGGCCCA-CGCACGCA-AGCAGAAGATA--AT--------CATTC----------AAAACCAGATGATAC----------------------------------------TC--AATGCCAGCCACC
droEle1 scf7180000491023:317671-317812 - TCAG------------------------------------------------------------------------------------TGCAGGTCGGTGCTCCGCCGCCCACAAAC---------A------------------------ACAACAACAATAACAACAACAACAACA-------------------ACAATAACAGCAGCAGC------------------------------------------------------------------------------AGCAGCAA--------------------------------------------------CAA----------------------------CAGCAACAGTAGCAGCAG------------------------C---AACAAC---------------------------AA------------------------------------------------------------CACATCCAATAGTGC----------------------------------------------GCAGCAGCAGC
droRho1 scf7180000777752:5247-5292 - CGACGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G----TGGAA---GT------GGTGAAGGCCATTGCCGGCGGACCGGACGAC
droBia1 scf7180000302126:3412126-3412340 - CGGCAGCGGCGGCCGT----------AGTGGCAG------------------------------------------------------CGGCGGTCAGTGCGCTG--------------------------CACAACGGCAACAAGCAG------------------------CAGCA-----------CTACAAC---------------------------------------------------------------AACAACAACAACAATAAC---------------------------------------A-----ATGGCA---AC--------------------AGCAAGTCGAGGGATCGCGAC-------GATCACCTGCAGGCAC------AGCAGCAGTCGCAGCAGTCGCAGCAGCCGC---------------------------A----------------------------------------------------------------------GGAC---G-ACGAGGAC---GAGGACGAGGAC------TACGA-CGAGGACGAGGAGGAGGAC
droTak1 scf7180000415256:362383-362413 + AGGCCGAGG---------------------------------------------------------------------------------------------------------------------AGCAGCAG---------------------------------------CAACA-------------------------------------------------------------------------------GCAGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGA
dm3 chr3R:911531-911702 - TCGCAC----------------------------------------------------------------------------------GGCATGTCGGCCCT-GTCCGCCCTGCAGC---------A------------------------GCAACAGCAGCAGCAACAGCAGCAGCA-----------CAGCCAG-----ACGCAGCAGCAGCATCATC------------------------------------------------------------------------ACC---------------------AGCA--GCAGCA---GCAAC-----------------ACATGTACCACGCC--GCCGTGGCTGCCCACCAGCAGCAGTTGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAA-CAGCAGCAGCAGCAGCAAC
droSim2 x:11980926-11981063 - TCAG------------------------------------------------------------------------------------TGCAGGTCGGTGCTCCGCCGCCCACAAAC---------A------------------------ACAACAGCAGCAGCAGCAG---CAACA----------------GCAACAACAAC---------------------------------------------------------------------------------------ACT---------------------AGCA--ACAATA---AC-------------------------------------------------AACAATAGCAGCAAC------AGCGGCAGCAACAG---CAGC---AGCAAC---------------------------AA-----------------------------------------------------------------------------------------------------------------------CACACCAAACGGT
droSec2 scaffold_36:342532-342630 - CCCCCA---CCAACCCCAAACCCGAAAATGGGGC------------------------------------------------------TACAGGTCGCACTC-GTTTGCGCGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGATG----TGGAG---GT------GGTGAAGGCGATTGCCGGTGGACCCGACGAC
droYak3 X:2739387-2739512 - GGCAAC---------------------------------------------------------------------------------------------------------------------------------------------------AGCAACAACATCGGCAGCAGCAACA-------------------ACATCTGCAGCAGCAACATCGGCCAAAGAGGAAGTGCAGCCATCAACAGTAACGTC---------------------------------------------------------------------------------------------------------------------------------ATCGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------G---GG------AGTGACAGCAG-CAGCAGCAGGAGCAGCAAC
droEre2 scaffold_4690:4615238-4615419 + der_373 ATTCGC----------------------------GTCGCA----------------------------------------------GC-----------------------------AGCGCCGGCAGCAACAACAACA--AATAGCAA------------------------AAACTTAGCAGCGTT-CGGCAAA-----GCGCAGCAACAGCAACAACAAAGGCAACACTAAAACTAACAGCAGCAACAGCAACAGCAAGT------------------------------------------------------------------------------------------------------------------------------GCAACTGC---------AACACCAGCAG---CAGC---AGCAGC---------------------------AA------------------------------------------------------CAACCAA-------GCGGC------------------------------------------------GGCCAGTCAGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
GAACCC----------------------------GTTGCGTATCGAACTTGGTTCGAGTTCGAGCAGCGGGTCGATCCGTGCCGTTGC-----------------------------CCAGCCTGCACCAATACAAAGACAACTAGCAA------------------------CAACA-----------CAACCGC---------------------------------------------------------------AATC-----------ACC---ACCACCAATCCCA--------------------------------CCA---AC--------------------ACCAAAACGACGCCATGCCCT-------CATCGTCAGTGGGAGCGACGAT-------------------------------------------------------------------------------------------------------------------------------------------G----AG--G---AG------GGTGAGGGTGAGAGGAAACAGGCCAGACGACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAGGAAACAGGCCAGACGA.2235.33160122002
.......................................................................................................................................AAGACAACTAGCAA------------------------CAACA-----------CAAC.................................................................................................................................................................................................................................................................................................................................................................................................................2344.00160151000
.......................................................................................................................................AAGACAACTAGCAA------------------------CAACA-----------CAACC................................................................................................................................................................................................................................................................................................................................................................................................................2444.00160160000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAGGAAACAGGCCAGACGAC2333.6711190001
.......................................................................................................................................AAGACAACTAGCAA------------------------CAACA-----------CAACCG...............................................................................................................................................................................................................................................................................................................................................................................................................2542.75110100001
.....................................GCGTATCGAACTTGGTTCGAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2252.60130111001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAGGAAACAGGCCAGACG..2132.006060000
..................................................................................................................................................................................................................................................................................................................................................................................................TCAGTGGGAGCGACGAT-------------------------------------------------------------------------------------------------------------------------------------------G----AG--G---AG------...............................2341.757011005
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAGGAAACAGGCCAGAC...2031.334031000
.......................................................................................................................................AAGACAACTAGCAA------------------------CAACA-----------CAACCGC---------------------------------------------------------------...............................................................................................................................................................................................................................................................................................................................................2641.255050000
.................................................................................................................................................................................................................................................................................................................................................................ACCAAAACGACGCCATGCCCT-------C....................................................................................................................................................................................................................2241.255050000
...................................TTGCGTATCGAACTTGGTTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2181.008242000
....................................................TTCGAGTTCGAGCAGCGGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2051.005050000
.......................................................................................................................................AAGACAACTAGCAA------------------------CAACA-----------CAACCGC---------------------------------------------------------------A..............................................................................................................................................................................................................................................................................................................................................2741.004040000
.....................................GCGTATCGAACTTGGTTCGAGTTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2451.005050000
....................................TGCGTATCGAACTTGGTTCGAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2350.804031000
......................................................................GTCGATCCGTGCCGTTGC-----------------------------C............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.753300000
.................................................................................................................................................................................................................................................................................................................................................................ACCAAAACGACGCCATGCCCT-------CA...................................................................................................................................................................................................................2340.753030000
.......................................................................................................................................AAGACAACTAGCAA------------------------CAACA-----------CAACCGC---------------------------------------------------------------AA.............................................................................................................................................................................................................................................................................................................................................2840.753030000
..................................................................................................................................................................................................................................................................................................................................................................................................TCAGTGGGAGCGACGAT-------------------------------------------------------------------------------------------------------------------------------------------G----AG--G---AG------GGT............................2640.753000003
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAGGAAACAGGCCAG.....1840.753010002
................................................................................................................................................................................................................................................................................................................................................................................TGCCCT-------CATCGTCAGTGGGAGCGAC..................................................................................................................................................................................................2540.753030000
.................................................................................................................................................................................................................................................................................................................................................................ACCAAAACGACGCCATGCCCT-------.....................................................................................................................................................................................................................2140.753030000
.................................................................................................................................................................................................................................................................................................................................................................ACCAAAACGACGCCATGCCCT-------CAT..................................................................................................................................................................................................................2440.753030000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAGGAAACAGGCCAGA....1930.672020000
.....................................GCGTATCGAACTTGGTTCGAGTTCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.603030000
..................................................................................................................................................................................................................................................................................................................................................................................................TCAGTGGGAGCGACGAT-------------------------------------------------------------------------------------------------------------------------------------------G----AG--...........................................2040.502020000
................................................................................................................................................................................................................................................................................................................................................................................TGCCCT-------CATCGTCAGTGGGAGC.....................................................................................................................................................................................................2240.502020000
.................................................................................................................................................................................................................................................................................................................................................................ACCAAAACGACGCCATGCCCT-------CATC.................................................................................................................................................................................................................2540.502020000
...........................................................................................................................................................................................................................................................................................................................................................................CGCCATGCCCT-------CATCGTCAGTGGGAG......................................................................................................................................................................................................2640.502020000
........................................................................................................................................AGACAACTAGCAA------------------------CAACA-----------CAACC................................................................................................................................................................................................................................................................................................................................................................................................................2340.502020000
........................................................................................................................................AGACAACTAGCAA------------------------CAACA-----------CAAC.................................................................................................................................................................................................................................................................................................................................................................................................................2240.502020000
..........................................TCGAACTTGGTTCGAGTTCGAGCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.402020000
.....................................GCGTATCGAACTTGGTTCGAGTTCGAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2850.402020000
...................................................GTTCGAGTTCGAGCAGCGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.402010001
....CC----------------------------GTTGCGTATCGAACTTGGTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2380.383030000
.....................................................................................................................................................................................................................................................................TC-----------ACC---ACCACCAATCCCA--------------------------------CCA---AC--------------------A................................................................................................................................................................................................................................................2430.331010000
.............................................................................................................................................................................................CAACCGC---------------------------------------------------------------AATC-----------ACC---ACCACC....................................................................................................................................................................................................................................................................................................................2030.331010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGGAAACAGGCCAGACGAC2230.331010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGAGGAAACAGGCCAGACGAT2430.331000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGAGGAAACAGGCCAGACGA.2330.331010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGGAAACAGGCCAGAC...1930.331010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGGAAACAGGCCAGACGA.2130.331010000
...................................................................................................................................................................................................C---------------------------------------------------------------AATC-----------ACC---ACCACCAATCC...............................................................................................................................................................................................................................................................................................................1930.331010000
..............................................................AGCAGCGGGTCGATCCGTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2070.292020000
....................................................................GGGTCGATCCGTGCCGTTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.251010000
...............................................................................................................................................................................................................................................................................................................................................................................................................CGAT-------------------------------------------------------------------------------------------------------------------------------------------G----AG--G---AG------GGTGAGGGT......................1940.251010000
..........................................................................................................................................ACAACTAGCAA------------------------CAACA-----------CAACCGC---------------------------------------------------------------A..............................................................................................................................................................................................................................................................................................................................................2440.251010000
................................................................................................................................................................................................................................................................................................................................................................................TGCCCT-------CATCGTCAGTGG.........................................................................................................................................................................................................1840.251010000
.AACCC----------------------------GTTGCGTATCGAACTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.252020000
.......................................................................................................................................AAGACAACTAGCAA------------------------CAACA-----------CAA..................................................................................................................................................................................................................................................................................................................................................................................................................2240.251010000
........................................................................................................................................AGACAACTAGCAA------------------------CAACA-----------C....................................................................................................................................................................................................................................................................................................................................................................................................................1940.251010000
......................................................................................................................................................................................................................................................................................................................................................................AACGACGCCATGCCCT-------CATCGTCAG............................................................................................................................................................................................................2540.251010000
.......................................................................................................................................AAGACAACTAGCAA------------------------CAACA-----------CAACCGA---------------------------------------------------------------...............................................................................................................................................................................................................................................................................................................................................2640.251010000
.............................................................................................................................................................................................................................................................................................................................................................................................................GACGAT-------------------------------------------------------------------------------------------------------------------------------------------G----AG--G---AG------GGTGAGGG.......................2040.251000001
.........................................................................................................................................................................................................................................................................................................................................................................GACGCCATGCCCT-------CATCGTCAGTGGGA.......................................................................................................................................................................................................2740.251010000
...........................................................................................................................................................................................................................................................................................................................................................................CGCCATGCCCT-------CATCGTCAGTGG.........................................................................................................................................................................................................2340.251010000
.................................................................................................................................................................................................................................................................................................................................................................ACCAAAACGACGCCATGCCC.............................................................................................................................................................................................................................2040.251010000
..................................................................................................................................................................................................................................................................................................................................................................CCAAAACGACGCCATGCCCT-------CA...................................................................................................................................................................................................................2240.251010000
.........................................................................................................................................................................................................................................................................................................................................................................GACGCCATGCCCT-------CATCGTCAGTGG.........................................................................................................................................................................................................2540.251010000
........................................................................................................................................AGACAACTAGCAA------------------------CAACA-----------CAACCG...............................................................................................................................................................................................................................................................................................................................................................................................................2440.251010000
..............................................................................................................................................................................................................................................................................................................................................................................................................ACGAT-------------------------------------------------------------------------------------------------------------------------------------------G----AG--G---AG------GGTGAGGG.......................1940.251010000
.................................................................AGCGGGTCGATCCGTGCCGTTGA-----------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.251010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGGTGAGAGGAAACAG..........1940.251001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGGTGAGAGGAAACAGGC........2140.251010000
............................................................................................................................................................................................................................................................................................................................................C--------------------ACCAAAACGACGCCATGCCCT-------CATCG................................................................................................................................................................................................................2740.251010000
.............................................................................................................................................ACTAGCAA------------------------CAACA-----------CAACCGC---------------------------------------------------------------...............................................................................................................................................................................................................................................................................................................................................2040.251010000
....................................TGCGTATCGAACTTGGTTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.252020000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG------GGTGAGGGTGAGAGGAAAC............2140.251010000
.................................................................................................................................................................................................................................................................................................................................................................ACCAAAACGACGCCATGCT..............................................................................................................................................................................................................................1940.251010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGAGGAAACAGGCCAG.....1940.251010000
...........................................................................................................................................................................................................................................................................................................................................................................CGCCATGCCCT-------CATCGTCAGTGGGA.......................................................................................................................................................................................................2540.251010000
........................................................................................................................................AGACAACTAGCAA------------------------CAACA-----------CAACCGC---------------------------------------------------------------...............................................................................................................................................................................................................................................................................................................................................2540.251010000
..................................................................................................................................................................................................................................................................................................................................................................CCAAAACGACGCCATGCCCT-------CATC.................................................................................................................................................................................................................2440.251010000
................................................................................................................................................................................................................................................................................................TCCCA--------------------------------CCA---AC--------------------ACCAAAACGACGCCA..................................................................................................................................................................................................................................2540.251010000
.................................................................................................................................................................................................................................................................................................................................................................ACCAAAACGACGCCATGCCCT-------CATCG................................................................................................................................................................................................................2640.251010000
............................................................................................................................................................................................................................................................................................................................................................................................................CGACGAT-------------------------------------------------------------------------------------------------------------------------------------------G----AG--G---AG------GGTGAGG........................2040.251010000
...................................................................CGGGTCGATCCGTGCCGTTGC-----------------------------CCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.251010000
........................................................................................................................................AGACAACTAGCAA------------------------CAACA-----------CAACCGC---------------------------------------------------------------A..............................................................................................................................................................................................................................................................................................................................................2640.251010000
..................................................................................................................................................................................................................................................................................................................................................................CCAAAACGACGCCATGCCCT-------.....................................................................................................................................................................................................................2040.251010000
.................................................................................................................................................................................................................................................................................................................................................................ACCAAAACGACGCCATGCC..............................................................................................................................................................................................................................1940.251010000
...........................................................................TCCGTGCCGTTGC-----------------------------CCAGCCTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.251010000
.AACCC----------------------------GTTGCGTATCGAACTTGGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2580.252011000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGGTGAGAGGAAACAGG.........2040.251001000
................................................................................................................................................................................................................................................................................................................................................................................TGCCCT-------CATCGTCAGTGGGA.......................................................................................................................................................................................................2040.251010000
..........................................................................................................................................ACAACTAGCAA------------------------CAACA-----------CAACC................................................................................................................................................................................................................................................................................................................................................................................................................2140.251010000
..................................................................................................................................................................................................................................................................................................................................................................................................TCAGTGGGAGCGACGAT-------------------------------------------------------------------------------------------------------------------------------------------G----AG--G---.......................................2140.251010000
...................................................................................................................................TACAAAGACAACTAGCAA------------------------CAACA-----------CAA..................................................................................................................................................................................................................................................................................................................................................................................................................2640.251010000
..................................................................................................................................................................................................................................................................................................CCA--------------------------------CCA---AC--------------------ACCAAAACGACGCCATG................................................................................................................................................................................................................................2540.251010000
................................................................................................................................................................................................................................................................................................................................................................................TGCCCT-------CATCGTCAGTGGGAGT.....................................................................................................................................................................................................2240.251010000
...........................................................................................................................................CAACTAGCAA------------------------CAACA-----------CAACCG...............................................................................................................................................................................................................................................................................................................................................................................................................2140.251010000
.....................................GCGTATCGAACTTGGTTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1980.252020000
.......................................................................................................................................AAGACAACTAGCAA------------------------CAACA-----------CA...................................................................................................................................................................................................................................................................................................................................................................................................................2140.251010000
..................................................................................................................................................................................................................................................................................................................................................................CCAAAACGACGCCATGCCCT-------C....................................................................................................................................................................................................................2140.251010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG------GGTGAGGGTGAGAGGAAACAGG.........2440.251010000
...............................................................................................................................................TAGCAA------------------------CAACA-----------CAACCGC---------------------------------------------------------------AATC-----------................................................................................................................................................................................................................................................................................................................................2240.251010000
GAACCC----------------------------GTTGCGTATCGAACTTGGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2680.252020000
..................................................................................................................................................................................................................................................................................................................................................................................................TCAGTGGGAGCGACGAT-------------------------------------------------------------------------------------------------------------------------------------------G----AG--G---AG------GG.............................2540.251010000
.............................................................................................................................................................................................................................................................................................................................................................................................................GACGAT-------------------------------------------------------------------------------------------------------------------------------------------G----AG--G---AG------GGTGAGG........................1940.251010000
..................................................................................................................................................................................................................................................................................................................................................................................................TCAGTGGGAGCGACGAT-------------------------------------------------------------------------------------------------------------------------------------------A----...............................................1850.201010000
......................................................CGAGTTCGAGCAGCGGGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1950.201010000
............................................GAACTTGGTTCGAGTTCGAGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2450.201010000
......................................................CGAGTTCGAGCAGCGGGTCGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2250.201010000
....................................................TTCGAGTTCGAGCAGCGGGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.201010000
..................................................................................................................................................................................................................................................................................................................................................................................................TCAGTGGGAGCGACGAT-------------------------------------------------------------------------------------------------------------------------------------------G----AG--A---.......................................2150.201010000
.....................................GCGTATCGAACTTGGTTCGAGTTCGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2650.201010000
................................................TTGGTTCGAGTTCGAGCAGCGGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2450.201010000
...................................................GTTCGAGTTCGAGCAGCGGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.201010000
.....................................................TCGAGTTCGAGCAGCGGGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.201010000
.....................................GCGTATCGAACTTGGTTCGAGTTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2450.201010000
.............................................AACTTGGTTCGAGTTCGAGCAGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2450.201010000
.....................................................TCGAGTTCGAGCAGCGGGTCGATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2450.201010000
..........................................................TTCGAGCAGCGGGTCGATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1950.201010000
........................................................AGTTCGAGCAGCGGGTCGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.201010000
.....................................................TCGAGTTCGAGCAGCGGGTCGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2250.201010000
.....C----------------------------GTTGCGTATCGAACTTGGTTCGAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2650.201010000
....................................................................................TTGC-----------------------------CCAGCCTGCACCAATA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.201010000
................................................TTGGTTCGAGTTCGAGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.201010000
...CCC----------------------------GTTGCGTATCGAACTTGGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23110.182020000
.....................................................................................................................................................................................................................................................................................................................................................................................T-------CATCGTCAGTGGGAGCGAA..................................................................................................................................................................................................2060.171010000
............................................................CGAGCAGCGGGTCGATCCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.141010000
...........................................................TCGAGCAGCGGGTCGATCCGTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2370.141010000
...................................................................................................................................................................................................................................................................................................................................................................................................CAGTGGGAGCGACGAT-------------------------------------------------------------------------------------------------------------------------------------------G----AG--G---AG------G..............................2370.141010000
....................................................................................................................................................................................................................................................................................................................................................................................................AGTGGGAGCGACGAT-------------------------------------------------------------------------------------------------------------------------------------------G----AG--G---A......................................2070.141001000
...................................................................................................................................................................................................................................................................................................................................................................................................CAGTGGGAGCGACGAT-------------------------------------------------------------------------------------------------------------------------------------------G----AG--G---.......................................2070.141010000
.............................................................GAGCAGCGGGTCGATCCGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2070.141010000
........................................................................................................................................................................................................................................................................................................................................................................CGACGCCATGCCCT-------CATCGTCAGTG..........................................................................................................................................................................................................2570.141010000
......................................................................................................................................................................................................................................................................................................................................................................................................TGGGAGCGACGAT-------------------------------------------------------------------------------------------------------------------------------------------G----AG--G---A......................................1870.141000001
.............................................................................................................................................................................................................................................................................................................................................................................CCATGCCCT-------CATCGTCAGT...........................................................................................................................................................................................................1980.131010000
.....................................GCGTATCGAACTTGGTTCGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.131010000
....CC----------------------------GTTGCGTATCGAACTTGGTTCGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2680.131010000
............................................................................................................................................................................................................................................................................................................................................................................GCCATGCCCT-------CATCGTCAGT...........................................................................................................................................................................................................2080.131001000
....CC----------------------------GTTGCGTATCGAACTTGGTTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.131001000
......................................CGTATCGAACTTGGTTCGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.131010000
GAACCC----------------------------GTTGCGTATCGAACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.131010000
......................................................................................................................................................................................................................................................................................................................................................................................................TGGGAGCGACGAT-------------------------------------------------------------------------------------------------------------------------------------------G----AG--G---AG------A..............................2080.131010000
GAACCC----------------------------GTTGCGTATCGAACTTGGTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2680.131010000
GAACCC----------------------------GTTGCGTATCGAACTTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.131010000
..ACCC----------------------------GTTGCGTATCGAACTTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.131010000
....................................TGCGTATCGAACTTGGTTCGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.131010000
....CC----------------------------GTTGCGTATCGAACTTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20110.091010000
................................................................................................................................................................................................................................................................................................TCCCA--------------------------------CCA---AC--------------------ACCAAAACGACG.....................................................................................................................................................................................................................................22120.081010000
.........................................................................................................................................................................................................................................................................................................................................................................................................GAGCGACGAT-------------------------------------------------------------------------------------------------------------------------------------------G----AG--G---AG------GGTA...........................20130.081010000
..........................................................................................................................................................................................................................................................................................................................................................................................................AGCGACGAT-------------------------------------------------------------------------------------------------------------------------------------------G----AG--G---AG------GGTA...........................19130.081010000
..........................................TCGAACTTGGTTCGAGTTCGAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23180.061010000
dp5
GAGCCC----------------------------GTTGCGAATCGAACTTGGTTCGAGCTCGAGCGGCGGGTCGATCCGTGCCGTTGT-----------------------------CCAGCCAACACCAATACCACGACAACCAGCAA------------------------CTACA----------------------A---------------------------------------------------------------AACCACAACCACAAATACCACCA---------------------------ACA-----ACAGCA---AC--------------------CCCAAAACGACGCCGCGCCCT-------CATCGACAATGGGAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GATGAGGGTGAGAGGAAGCAGGCCAGACGACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................................................................................................................................................................................................................................................................TGGGAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GATGAGG........................23720.711450128001001600
......................................................................................................................................................................................................................................................................................................................................................................................................TGGGAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GATG...........................20811.639309200001000
......................................................................................................................................................................................................................................................................................................................................................................................................TGGGAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GATGAG.........................2279.436605900200500
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAGGAAGCAGGCCAGACGAC2366.3338022200001400
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGGAAGCAGGCCAGACGA.2165.503303000000300
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAGGAAGCAGGCCAGACGA.2265.0030012200001600
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGGAAGCAGGCCAGACGAC2265.003002440000200
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAGGAAGCAGGCCAGACG..2164.172502200000300
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGGAAGCAGGCCAGACG..2063.332002000000000
......................................................................................................................................................................................................................................................................................................................................................................................................TGGGAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GATGA..........................2172.711901600000300
......................................................................................................................................................................................................................................................................................................................................................................................................TGGGAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GAT............................1982.381901800000100
....................................TGCGAATCGAACTTGGTTCGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2332.3370700000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAGGAAGCAGGCCAGAC...2061.3380520100000
.......................................................................................................................................................................................................................................................................................................................................................................................................GGGAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GATGAGG........................2271.2990900000000
......................................................................................................................................................................................................................................................................................................................................................................................................TGGGAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GA.............................1881.25100800000110
.......................................................................................................................................................................................................................................................................................................................................................................................................GGGAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GATG...........................1981.0080800000000
...................................TTGCGAATCGAACTTGGTTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2151.0050300200000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGAAGCAGGCCAGACGAC2161.0060600000000
...................................TTGCGAATCGAACTTGGTTCGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2431.0030300000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGGAAGCAGGCCAGAC...1960.6740400000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GGGAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GATGAG.........................2170.5740400000000
..........................................TCGAACTTGGTTCGAGCTCGAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2390.5650500000000
.....................................................................................................................................................................................................................................................................................................................................................................................................ATGGGAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GAT............................2020.5010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................TGGGAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GATT...........................2080.5040400000000
.....................................................TCGAGCTCGAGCGGCGGGTCGATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.5010100000000
.........................................................GCTCGAGCGGCGGGTCGATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010100000000
..........................................................CTCGAGCGGCGGGTCGATCCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................T-------CATCGACAATGGGAGTGACGAA----------------------------------------------------------------------------------------------------------------------------------------------------...........................................2320.5010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................ATGGGAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GATGAGG........................2420.5010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................TGGGAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GAA............................1980.5040400000000
...........................................CGAACTTGGTTCGAGCTCGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2090.4440400000000
......................................................................................................................................................................................................................................................................................................................................................................................................TGGGAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GATGAGTT.......................2470.4330300000000
......................................................................................................................................................................................................................................................................................................................................................................................................TGGGAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GATGAGT........................2370.4330300000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGAGAGGAAGCAGGCCAGAC...2250.4020200000000
.........................................ATCGAACTTGGTTCGAGCTCGAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2450.4020200000000
...CCC----------------------------GTTGCGAATCGAACTTGGTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2450.4020200000000
......................................................................................................................................................................................................................................................................................................................................................................................................TGGGAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GATGAGGA.......................2480.3830300000000
....CC----------------------------GTTGCGAATCGAACTTGGTTCGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2730.3310100000000
....CC----------------------------GTTGCGAATCGAACTTGGTTCGAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2830.3310100000000
..................................GTTGCGAATCGAACTTGGTTCGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2530.3310100000000
....................................TGCGAATCGAACTTGGTTCGAGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.3310100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGAAGCAGGCCAGACGA.2060.3320200000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAGGAAGCAGGCCAGA....19140.2940210000100
.......................................................................................................................................................................................................................................................................................................................................................................................................GGGAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GATGA..........................2070.2920200000000
......................................................................................................................................................................................................................................................................................................................................................................................................TGGGAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GATGAA.........................2270.2920200000000
......................................................................................................................................................................................................................................................................................................................................................................................................TGGGAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GATGAGA........................2370.2920100100000
......................................................................................................................................................................................................................................................................................................................................................................................................TGGGAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GATGAGAA.......................2480.2520200000000
......................................................................................................................................................................................................................................................................................................................................................................................................TGGGAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GAAA...........................2080.2520200000000
.........................................................................................................................................................................................................................................................................................................................................................................................................GAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GATGAG.........................1980.2520200000000
...CCC----------------------------GTTGCGAATCGAACTTGGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2390.2220200000000
...........................................CGAACTTGGTTCGAGCTCGAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2290.2220200000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAGGAAGCAGGCCAG.....18140.2130300000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGTGAGAGGAAGCAGGC........19140.2130300000000
.....C----------------------------GTTGCGAATCGAACTTGGTTCGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2450.2010100000000
...................................TTGCGAATCGAACTTGGTTCTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2250.2010100000000
...................................TTGCGAATCGAACTTGGTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.2010100000000
....................................TGCGAATCGAACTTGGTTCGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.2010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGTGAGAGGAAGCAGGCCAGAC...2450.2010100000000
....CC----------------------------GTTGCGAATCGAACTTGGTTCGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.2010100000000
....CC----------------------------GTTGCGAATCGAACTTGGTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2350.2010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGAGAGGAAGCAGGCCAGACGA.2450.2010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGAGGAAGCAGGCCAGACGAC2460.1710100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGGAAGCAGGCCAGACGAT2260.1710100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAGGAAGCAGGCCAGACA..2160.1710100000000
..........................................................CTCGAGCGGCGGGTCGATCCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2260.1710100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGAGGAAGCAGGCCAGACG..2260.1710100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGAGGAAGCAGGCCAGACGA.2360.1710100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAGGAAGCAGGCCAGACGTT2360.1710100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGGAAGCAGGCCAGACGAA2260.1710100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAAGCAGGCCAGACG..1860.1710100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAGGAAGCAGGCCAGACGAA2360.1710100000000
......................................................................................................................................................................................................................................................................................................................................................................................................TGGGAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GATGAGGT.......................2470.1410100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGTGAGAGGAAGCAGGCC.......21140.1420200000000
......................................................................................................................................................................................................................................................................................................................................................................................................TGGGAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GATGAAC........................2370.1410100000000
......................................................................................................................................................................................................................................................................................................................................................................................................TGGGAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GATGAAA........................2370.1410100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GGGAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GATGAAA........................2270.1410100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGGAAGCAGGCCAGA....18150.1320200000000
....................................................................................................................................................................................................................................................................................................................................................................AAAACGACGCCGCGCCCT-------CATCGA...............................................................................................................................................................................................................2480.1310100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GGGAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GAT............................1880.1310100000000
......................................................................................................................................................................................................................................................................................................................................................................................................TGGGAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GATGAAAA.......................2480.1310100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................AGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GATGAG.........................1880.1310100000000
......................................................................................................................................................................................................................................................................................................................................................................................................TGGGAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GT.............................1880.1310100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................GAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GATGAGA........................2080.1310000000100
......................................................................................................................................................................................................................................................................................................................................................................................................TGGGAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GAC............................1980.1310100000000
............................................GAACTTGGTTCGAGCTCGAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.1110100000000
............................................GAACTTGGTTCGAGCTCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1890.1110100000000
...................................TTGCGAATCGAACTTGGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1990.1110100000000
....................................................................................................................................................................................................................................................................................................................................................................AAAACGACGCCGCGCCCT-------.....................................................................................................................................................................................................................1890.1110010000000
....................................TGCGAATCGAACTTGGTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1890.1110100000000
..........................................TCGAACTTGGTTCGAGCTCGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.1110100000000
..............................................ACTTGGTTCGAGCTCGAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1990.1110100000000
...........................................CGAACTTGGTTCGAGCTCGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.1110100000000
..........................................TCGAACTTGGTTCGAGCTCGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2290.1110100000000
...........................................CGAACTTGGTTCGAGCTCGAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2290.1110100000000
..................................................................................................................................................................................................................................................................................................................................................................CCAAAACGACGCCGCGCCCT-------CAA..................................................................................................................................................................................................................2390.1110100000000
..........................................TCGAACTTGGTTCGAGCTCGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2290.1110100000000
..................................................................................................................................................................................................................................................................................................................................................................CCAAAACGACGCCGCGCCC.............................................................................................................................................................................................................................1990.1110001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GGGAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GAA............................1890.1110100000000
....................................................................................................................................................................................................................................................................................................................................................................AAAACGACGCCGCGCCCT-------C....................................................................................................................................................................................................................1990.1110100000000
......................................................................................................................................................................................................................................................................................................................................................................................................TGGGAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AA------A..............................17200.1020000000200
.......................................................................................................................................................................................................................................................................................................................................................................ACGACGCCGCGCCCT-------CATC.................................................................................................................................................................................................................19120.0810100000000
...........................................................TCGAGCGGCGGGTCGATCCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21120.0810100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GGGAGTGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GTA............................18120.0810100000000
.....................................................................................................................................................................................................................................................................................................................................................................AAACGACGCCGCGCCCT-------CATCGT...............................................................................................................................................................................................................23120.0810100000000
.........................................................................................................................................................................................................................................................................................................................................................................GACGCCGCGCCCT-------CATCG................................................................................................................................................................................................................18120.0810100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGGTGAGAGGAAGCAGGC........21130.0810000000010
.....................................................................................................................................................................................................................................................................................................................................................................AAACGACGCCGCGCCCT-------CA...................................................................................................................................................................................................................19130.0810100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGTGAGAGGAAGCAG..........18140.0710100000000
............................................................................................................................................................................................................................................................................................................................................................................................................TGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GATGAGG........................17140.0710000000100
............................................................................................................................................................................................................................................................................................................................................................................................................TGACGAT----------------------------------------------------------------------------------------------------------------------------------------------------G---AG------GATGAGGT.......................18200.0510100000000
droWil2
GCAAC----------------------------------------------------------------------------------------------------------------------------------------------------AACAACAACAGCACCAGCAGCAACA-------------------TCAATCACAACAACAACAACAAC------------------------------------------------------------------------CTC---------------------AGCATGATAGTTGCAACAA---------------TAA----------------------------TAACAACAACAACAAC---------AGCAATAATAGTGCTAGC---AGCAGC---------------------------AG------------------------------------------------------------CTCACA---AAG---TAGTCT----CGACG---ATGATGAC------GATGA-CGATGAAGAGGAAGACGATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACG---ATGATGAC------GATGA-...................18200.05100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACG---ATGATGAC------GATGA-CGA................20200.05100100
.............................................................................................................................................................................................................................................................................................................................................................................................TAACAACAACAACAAC---------AGCAA.......................................................................................................................................................................................21200.05100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACG---ATGATGAC------GATGA-C..................18200.05100010
droVir3
TGCCGC----------------------------------------------------------------------------------------------------TGCCCCATCAT------AGTAGCAGTAGCAGTAGCAGTAGCAG------------------------TAACA----------GTAGCAAT---------------------------------------------------------------AATC-----------ATC---ATCATCATCATCATC------------------AACA-----ACAA-------------------------------------------------------------------------------------------------C---AACAAC---------------------------AACATGCAGCCTCGCTGGGCGGA-AGCGGAAGTGGAAATGGAAATGGCAATGGAAATGGCTTT-------GC-------------------------------------------TGCAGCTGTCCTAGACAACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................................................................................................................................................................TC-----------ATC---ATCATCATCATCATC------------------.........................................................................................................................................................................................................................................................................................20200.5010000000000300000007000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TC-----------ATC---ATCATCATCATCAT............................................................................................................................................................................................................................................................................................................19200.204000000000040000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TC-----------ATC---ATCATCATCATCATC------------------AACA-----AA..............................................................................................................................................................................................................................................................................2690.111000000010000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TC---ATCATCATCATCATC------------------A........................................................................................................................................................................................................................................................................................18200.102000000000000000000000000020000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................A-----ACAA-------------------------------------------------------------------------------------------------C---AACAAC---------------------------AACATGCA..............................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TC-----------ATC---ATCATCATCATCATC------------------AAC......................................................................................................................................................................................................................................................................................23200.051000000000000000000000010000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................ACAA-------------------------------------------------------------------------------------------------C---AACAAC---------------------------AACATGCA..............................................................................................................................19200.051000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TC-----------ATC---ATCATCATCATCATC------------------AA.......................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000100000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................A-----ACAA-------------------------------------------------------------------------------------------------C---AACAAC---------------------------AACATGC...............................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................AACA-----ACAA-------------------------------------------------------------------------------------------------C---AACAAC---------------------------AACATG................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................T---------------------------------------------------------------AATC-----------ATC---ATCATCATCATC..............................................................................................................................................................................................................................................................................................................20200.051000000000000000010000000000000000000000000000000000000000000000
droMoj3
GGACGT----------------------------GTCGCGCGTCCAAGTTAGCAAATTGGCGAGTAGTAGGCGCAC-CAGGCAGCTGC-----------------------------CAA---------------------------------------------------------------------------------GCACAACCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACACAACCGATAGGAGCAAAGGATAACGCACGACTGTGCCACACGAACAGCGACAA---------------------------------------TGAC---G-ACGCCGAC---GAGAACGACGAC------GACGA-CGGCGCCGATGAGGACGACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
GAGCGG---CGGGCGC----------AGTGGTGC------------------------------------------------------TAACACACGCT------------------CTGGCCAGCAGCAGCAGCAGCAGCATCAGCAG------------------------CAGCG----------------------G---------------------------------------------------------------CAGCGGCAGCATCAGCAGCAGCA---GC------------------------ATCA-----GCAGCAGCAAAAACGGCAGCA------------------------CCT----------------------AC------AGCAGCAGCAGCAGCAGCAGC---AGCAGC---------------------------AG------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................T----------------------AC------AGCAGCAGCAGCAGCA...............................................................................................................................................................................19200.05110
droAna3
GCA-----------------------------------------------------------------------------------------GGTCGGTGCTCCGCCGCCCACAAAC------AACAACAACAACAACAACAGTAGCAA------------------------CAACA----------------------A---------------------------------------------------------------CAGCAGCAGTAACAGTAGCAACA---GC------------------------AACA-----ACAACAGCAACAACAGCAGCAGCAACAA----------------------------CAACAACAGTAGCAGCAGCAAC---------AACAATAGTAGC---AATAAC---------------------------AA------------------------------------------------------------CACACC-------------------------------------------------------AAACGGTGCACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................................................................GCAGCAGTAACAGTAGCAACA---GC------------------------......................................................................................................................................................................................................................................................................................2312.002020000
...........................................................................................................................AACAACAACAACAACAACAGTAGCAA------------------------C....................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TAGC---AATAAC---------------------------AA------------------------------------------------------------CACACC-------------------------------------------------------AAACGGT....2511.001010000
..................................................................................................................................................................................................................................................................................AACAGTAGCAACA---GC------------------------AACA-----AC...........................................................................................................................................................................................................................................................................2111.001010000
........................................................................................................................................................................................................A---------------------------------------------------------------CAGCAGCAGTAACAGTAGCAAC....................................................................................................................................................................................................................................................................................................................2311.001010000
.....................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACAA----------------------------CAACAACAGTAGC........................................................................................................................................................................................................2511.001100000
..................................................................................................................................................CAA------------------------CAACA----------------------A---------------------------------------------------------------CAGCAGCAGTAAC.............................................................................................................................................................................................................................................................................................................................2211.001010000
............................................................................................................................................................................................................................................................................................................................................................AACAA----------------------------CAACAACAGTAGCAGCAGC..................................................................................................................................................................................................2420.501010000
..................................................................................................................................ACAACAACAACAGTAGCAA------------------------CAACA----------------------A---------------------------------------------------------------C.........................................................................................................................................................................................................................................................................................................................................2620.501010000
.....................................................................................................................................ACAACAACAGTAGCAA------------------------CAACA----------------------A---------------------------------------------------------------C.........................................................................................................................................................................................................................................................................................................................................2320.501010000
...........................................................................................................................................................................................................................................................................................................................................GCAACAACAGCAGCAGCAACAA----------------------------CAAC.................................................................................................................................................................................................................2630.331010000
................................................................................................................................CAACAACAACAACAGTAGCAA------------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................2140.251001000
................................................................................................................................................................................................................................................................................................................................................................A----------------------------CAACAACAGTAGCAGCAGC..................................................................................................................................................................................................2040.251010000
...............................................................................................................................................................................................................................................................................................................................A-----ACAACAGCAACAACAGCAGCAGC......................................................................................................................................................................................................................................................2480.131010000
.............................................................................................................................................................................................................................................................................................CA---GC------------------------AACA-----ACAACAGCAACAA................................................................................................................................................................................................................................................................21100.101000100
.......................................................................................................................................................................................................................................................................................................................................AACAGCAACAACAGCAGCAGCAACA..................................................................................................................................................................................................................................................25120.081000001
............................................................................................................................................................................................................................................................................................................................................................AACAA----------------------------CAACAACAGTAGC........................................................................................................................................................................................................18140.071010000
.................................................................................................................................AACAACAACAACAGTAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................18140.071010000
.......................................................................................................................................................................................................................................................................................................................................AACAGCAACAACAGCAGCAGCA.....................................................................................................................................................................................................................................................22200.051000001
droKik1
CCGCTG---CCTATACCC-------------------------------------------------------------------------ATGTCG---------------------------------GCACAAGGATC-GCCGCAACAGCAACATCATCATCACCAGCAGCAGCA----------------------------------------------------------------------------------------------------------------CCACCAGCATCATCATCATCATCAGCA-----GCAG-------------------------------------------------------------------------------------------------C---AACAAC---------------------------AA------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CATTGC--------------------------------------------------------------------------------------------------------------------------------TAAGACCAGCAGCAG------------------------CAACA-------------------------------------------------------------------------GCAACAACAATC-----------GCA----------------------------------------------------------------------------------------------------------------------ACTACCAA---------ATGGATTCCAAT---CAAAACCAAATACAAA---------------------TGGAGGCCCA-CGCACGCA-AGCAGAAGATA--AT--------CATTC----------AAAACCAGATGATAC----------------------------------------TC--AATGCCAGCCACCSizeHit CountTotal NormTotal
No Reads
droEle1
TCAG------------------------------------------------------------------------------------TGCAGGTCGGTGCTCCGCCGCCCACAAAC---------A------------------------ACAACAACAATAACAACAACAACAACA-------------------ACAATAACAGCAGCAGC------------------------------------------------------------------------------AGCAGCAA--------------------------------------------------CAA----------------------------CAGCAACAGTAGCAGCAG------------------------C---AACAAC---------------------------AA------------------------------------------------------------CACATCCAATAGTGC----------------------------------------------GCAGCAGCAGCSizeHit CountTotal NormTotal
No Reads
droRho1
CGACGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G----TGGAA---GT------GGTGAAGGCCATTGCCGGCGGACCGGACGACSizeHit CountTotal NormTotal
No Reads
droBia1
CGGCAGCGGCGGCCGT----------AGTGGCAG------------------------------------------------------CGGCGGTCAGTGCGCTG--------------------------CACAACGGCAACAAGCAG------------------------CAGCA-----------CTACAAC---------------------------------------------------------------AACAACAACAACAATAAC---------------------------------------A-----ATGGCA---AC--------------------AGCAAGTCGAGGGATCGCGAC-------GATCACCTGCAGGCAC------AGCAGCAGTCGCAGCAGTCGCAGCAGCCGC---------------------------A----------------------------------------------------------------------GGAC---G-ACGAGGAC---GAGGACGAGGAC------TACGA-CGAGGACGAGGAGGAGGACSizeHit CountTotal NormTotal
No Reads
droTak1
AGGCCGAGG---------------------------------------------------------------------------------------------------------------------AGCAGCAG---------------------------------------CAACA-------------------------------------------------------------------------------GCAGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGASizeHit CountTotal NormTotal
No Reads
dm3
TCGCAC----------------------------------------------------------------------------------GGCATGTCGGCCCT-GTCCGCCCTGCAGC---------A------------------------GCAACAGCAGCAGCAACAGCAGCAGCA-----------CAGCCAG-----ACGCAGCAGCAGCATCATC------------------------------------------------------------------------ACC---------------------AGCA--GCAGCA---GCAAC-----------------ACATGTACCACGCC--GCCGTGGCTGCCCACCAGCAGCAGTTGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAA-CAGCAGCAGCAGCAGCAACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAA-CAGCAGCAGCAGCAGCA..22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................................................CAGCAGCAGCAACAGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..........................................................................................................................................................ACAGCAGCAGCAACAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................C---------A------------------------GCAACAGCAGCAGCAACAGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TCAG------------------------------------------------------------------------------------TGCAGGTCGGTGCTCCGCCGCCCACAAAC---------A------------------------ACAACAGCAGCAGCAGCAG---CAACA----------------GCAACAACAAC---------------------------------------------------------------------------------------ACT---------------------AGCA--ACAATA---AC-------------------------------------------------AACAATAGCAGCAAC------AGCGGCAGCAACAG---CAGC---AGCAAC---------------------------AA-----------------------------------------------------------------------------------------------------------------------CACACCAAACGGTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..AG------------------------------------------------------------------------------------TGCAGGTCGGTGCTCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200200000000000000
......................................................................................................................................................................................................................................................................................................................................TA---AC-------------------------------------------------AACAATAGCAGCAAC------AGCGG..........................................................................................................................................................................................2411.00100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................AACAATAGCAGCAAC------AGCGGCG........................................................................................................................................................................................2211.00100000000001000000
......................................................................................................................................................................................................................................................................................................................................TA---AC-------------------------------------------------AACAATAGCAGCAAC------AGCGGCA........................................................................................................................................................................................2611.00100000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CAACAG---CAGC---AGCAAC---------------------------AA-----------------------------------------------------------------------------------------------------------------------CAC..........2151.00500000500000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-----------------------------------------------------------------------------------------------------------------------CACACCAAACGGT1520.50100000010000000000
...............................................................................................................ACAAAC---------A------------------------ACAACAGCAGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................1930.33100000100000000000
............................................................................................................................................................AGCAGCAGCAGCAG---CAACA----------------GCAACAA.........................................................................................................................................................................................................................................................................................................................................................................................................26110.09100010000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................AAC------AGCGGCAGCAACA..................................................................................................................................................................................16190.05100000000001000000
..................................................................................................................AAC---------A------------------------ACAACAGCAGCAGCAGCAG---C....................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010000000000000
droSec2
CCCCCA---CCAACCCCAAACCCGAAAATGGGGC------------------------------------------------------TACAGGTCGCACTC-GTTTGCGCGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGATG----TGGAG---GT------GGTGAAGGCGATTGCCGGTGGACCCGACGACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................GG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGATG----TGGAG---GT------GGT............................1820.5010100
droYak3
GGCAAC---------------------------------------------------------------------------------------------------------------------------------------------------AGCAACAACATCGGCAGCAGCAACA-------------------ACATCTGCAGCAGCAACATCGGCCAAAGAGGAAGTGCAGCCATCAACAGTAACGTC---------------------------------------------------------------------------------------------------------------------------------ATCGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------G---GG------AGTGACAGCAG-CAGCAGCAGGAGCAGCAACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................................................................................A-------------------ACATCTGCAGCAGCAACATC.........................................................................................................................................................................................................................................................................................................................................................................................2121.00202000000000
.......................................................................................................................................................................................................ATCTGCAGCAGCAACATC.........................................................................................................................................................................................................................................................................................................................................................................................1850.20101000000000
................................................................................................................................................................................CA-------------------ACATCTGCAGCAGCAAC............................................................................................................................................................................................................................................................................................................................................................................................1970.14101000000000
droEre2
ATTCGC----------------------------GTCGCA----------------------------------------------GC-----------------------------AGCGCCGGCAGCAACAACAACA--AATAGCAA------------------------AAACTTAGCAGCGTT-CGGCAAA-----GCGCAGCAACAGCAACAACAAAGGCAACACTAAAACTAACAGCAGCAACAGCAACAGCAAGT------------------------------------------------------------------------------------------------------------------------------GCAACTGC---------AACACCAGCAG---CAGC---AGCAGC---------------------------AA------------------------------------------------------CAACCAA-------GCGGC------------------------------------------------GGCCAGTCAGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................ACACCAGCAG---CAGC---AGCAGC---------------------------......................................................................................................................................20200.0510100000
..............................................................................................................................................................................................................................................AACAGCAGCAACAGCAACA.................................................................................................................................................................................................................................................................................................................................................19200.0511000000
...............................................................................................................................................................................................................................................ACAGCAGCAACAGCAACAGC...............................................................................................................................................................................................................................................................................................................................................20200.0510100000
........................................................................................................................................................................................................................................................................................................................................................................................................................CACCAGCAG---CAGC---AGCAGC---------------------------A.....................................................................................................................................20200.0510000010
......................................................................................................................................................................................................................................................................................................................................................................................................................AACACCAGCAG---CAGC---AGCA...................................................................................................................................................................19200.0511000000

Generated: 06/08/2015 at 04:05 PM