ID:

dpe_1276

 Coordinate:

scaffold_26:126395-126545 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-20.0 -19.6 -19.3

Flybase annnotation

CDS [Dper\GL13362-cds]; exon [dper_GLEANR_13763:3]; intron [Dper\GL13362-in]

Repeatable elements

NameClassFamilyStrand
Helitron-1N1_DVirRCHelitron-
mature
  1. dpe_2463  scaffold_42:238498-238518 +
  2. scaffold_111:102926-102946 +
  3. scaffold_71:292553-292573 +
  4. scaffold_415:11210-11230 +
  5. scaffold_75:69761-69781 +
  6. scaffold_84:6399-6419 +
  7. scaffold_90:54623-54643 +
  8. dpe_1276  scaffold_26:126397-126417 +
  9. scaffold_12416:268-288 +
  10. scaffold_105:123165-123185 +
  11. scaffold_2698:1194-1214 +
  12. scaffold_3075:1070-1090 +
  13. scaffold_1337:752-772 +
  14. scaffold_1428:3462-3482 +
  15. scaffold_1428:4158-4178 +
  16. scaffold_1718:1140-1160 +
  17. scaffold_359:9085-9105 +
  18. scaffold_2490:840-860 +
  19. scaffold_9699:112-132 +
  20. scaffold_10412:171-191 +
star
  1. scaffold_22:88556-88580 +
  2. scaffold_0:3960240-3960264 +
  3. scaffold_3:1058127-1058151 +
  4. scaffold_9:2197452-2197476 +
  5. scaffold_43:137462-137486 +
  6. scaffold_1968:5737-5761 +
  7. scaffold_10958:334-358 +
  8. scaffold_214:29781-29805 +
  9. scaffold_113:105011-105035 +
  10. scaffold_113:107173-107197 +
  11. scaffold_113:111962-111986 +
  12. scaffold_113:115687-115711 +
  13. scaffold_327:52922-52946 +
  14. scaffold_400:14070-14094 +
  15. scaffold_400:15747-15771 +
  16. scaffold_4131:4043-4067 +
  17. scaffold_8358:754-778 +
  18. scaffold_309:41604-41628 +
  19. scaffold_9951:856-880 +
  20. scaffold_7766:1223-1247 +
  21. scaffold_10:16750-16774 +
  22. scaffold_759:1608-1632 +
  23. scaffold_111:102988-103012 +
  24. scaffold_74:54312-54336 +
  25. scaffold_75:69823-69847 +
  26. scaffold_84:6461-6485 +
  27. scaffold_43:395607-395631 +
  28. dpe_1276  scaffold_26:126459-126483 +
  29. scaffold_1239:2789-2813 +
  30. scaffold_924:5166-5190 +
  31. scaffold_116:38269-38293 +
  32. scaffold_520:6836-6860 +
  33. scaffold_1428:3524-3548 +
  34. scaffold_3936:1382-1406 +
  35. scaffold_1718:1202-1226 +
  36. scaffold_5251:1195-1219 +
  37. scaffold_1453:4235-4259 +
  38. scaffold_5566:333-357 +
  39. scaffold_2490:1759-1783 +
  40. scaffold_9699:174-198 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATCGACTCGGCTATTGATGCTGATCAAGAATATATATACTTTATGGGGTCGGAAACGATTCCTTCTGGACGTTACACACATCCACTTTTACCACAAATCTAATATACCCCAATACTCATTTTGAGTATCGGGTATAAAAAACTTTTAAATGACTCACGGTCGTTAATTCCAAGCCCCCAACTTCATCTCAATCTTCATCAGACTGGCGTCTATTCAAACACGGTGGTGCTGCAGCACCATAGCGTGGTGAT
****************************************************..................................................((((.(((.((((((.....)))))).)))))))...**************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V111
male body
....................................................AAACGATTCCTTCTGGACGTT.................................................................................................................................................................................. 21 0 20 0.10 2 2 0
....................TGATCAAGAATATATATACTTT................................................................................................................................................................................................................. 22 0 20 0.05 1 1 0
..................................................................................................................CTCATTTTGAGTATCGGGTATAAAA................................................................................................................ 25 0 20 0.05 1 0 1

Anti-sense strand reads

TAGCTGAGCCGATAACTACGACTAGTTCTTATATATATGAAATACCCCAGCCTTTGCTAAGGAAGACCTGCAATGTGTGTAGGTGAAAATGGTGTTTAGATTATATGGGGTTATGAGTAAAACTCATAGCCCATATTTTTTGAAAATTTACTGAGTGCCAGCAATTAAGGTTCGGGGGTTGAAGTAGAGTTAGAAGTAGTCTGACCGCAGATAAGTTTGTGCCACCACGACGTCGTGGTATCGCACCACTA
****************************************************************************************************************..................................................((((.(((.((((((.....)))))).)))))))...**************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V042
embryo
 V050
head
 M021
embryo
.AGCTGAGCCGATAACTACGAC..................................................................................................................................................................................................................................... 21 0 20 0.45 9 9 0 0 0
..................................................................................................................................................................................................................................ACGAGGTCGTGGAATCGC....... 18 2 5 0.40 2 0 1 1 0
...........................................ACCCCAGCCTTTGCTAAGGAAGACCT...................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0
................................................................................................................................................................................................................................CGACGAGGTCGTGGAATCGC....... 20 3 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_26:126345-126595 + dpe_1276 ATCGACTCGGCTATTGATGCTGATCAAGAATATATAT----ACTTTATGGGGTCGGAAACGATT-CCTTCTGGACGTTACAC--------ACATCCACTTTTACCACAAATCTAATATACCCCA-ATACTCAT----TTTGAGTA---------------TCGGGTATAAAAAAC---------------------------TT----------------------------------------------------TTAAATGACTCA-----C----GGTCGTTAATTCCA-----------------------------------------------------AGCCCCCAACT---TCATCTCAATCTT---CAT---------------------------------------------------------------------------------CA----------GACTGGCGTCTAT-------------------------------------TCAAACACGGTGGTG---CTGCAGCACCATAGCGTGGTGAT
dp5 Unknown_group_428:879-1100 - ATCGACTCGGCCATTGATGCTGATCAAGAATTTATAT----ACTTTATGGGGTCGGAAACGATT-CCTTCTGGACGTTACAC--------ACATCCATTTTCACCACAAATCTAATATACCCCA-ATACTCAT----TTTGAGTA---------------TCGGGTATAATAACC---------------------------CTC---------CGAAT--------------------------------------------------ATTCC----C-----------------------------------------------------------------------AC---CTCTTTTCACCAATCCC---CCTCAGACATGGGCACACA----------------------------------------------TT---------------------------------AACAT---------------------------------------------------TGTTT---CCACAGCTCCACAA-----C-G-
droWil2 scf2_1100000004954:1503048-1503294 - ATCAACTCAGCTTCTCATGCTGATCAAGAATATATAT----AGTTTATGGGGTTGGAAACGTCT-CCTTCTGTGCGTTACAA--------ACAT------CT-GACCAATTTAATAATACCCTC-T------------GC--------------------AAGGGTACAAAAAGT--------TATTAAAAGTGCTCAAATAAAAA-ACTACATATTTTATGACATTGCATTCCAGG--------------------------------------------------------------------------------------------------------------TAAACAAAT---TCAT---------GCTC------------------------------------------------------------------------------------AAAATACAT----------------CAAATA--------T-------------T-AAAAT-TTAAACATTTTGATA---CCATACACCCATAGG---GT-G-
droVir3 scaffold_12958:1655037-1655275 + ATCGACTCGGCTATTGGTGCTAATCAAGAATATATAT----ACTTTATGAGGTCGAAAAAGCTT-CCTTCTACCTGTTACAT--------ACATTGGATTTT-GCACAAATACAAAATACCCTTAATACCCATTTTCAATGGATA---------------TAGGGTATAAAAACT----------------------------------------------------------------------------------------------------------------------------------------TAAAA-------CATC-----------------------A--------------------------TC----------------------------------GA---------------AGCCTCCATTCTCGAACCAGCTTTTAAAGAG----------GCCTGGCATCTGTCCGAA--CAAC------------------------------------TGCT----CTGCACCACTCTTCAGTGGAGA-
droMoj3 scaffold_6540:2408715-2408939 + ATCGACTCAGCTCGTCGTCCTGATCAAGAATATATAT----ACTTTAAGGGGTCTGAGATGATT-CCTTCTGCCTGTTACAT--------ACTT------TT-C-ACAAAACCATTATACCCTGATTTCCCATTTTCAATGGGTT---------------CAGGGTATAATGAAC-A---------------------------------------------------------ATGATCTTGGCTAGTCAACGGGG-------------------------------TATG---AG-----TTCCAAATTTAAA----------------------------------------------AT----------------------------------------------------------------------------------CTCTAGTTTCAGTGGG------ATCGAAATGGTTTGTAC-------------------------------------TCATACG--------------------------------C-
droGri2 scaffold_14853:3669669-3669905 - ATCGACTCGGCTCTAGATGCTGATCAAGAATAAATAT--AGAGCTTATGGAATCGGAAAGTTATGCCTTAT-------ATATACATATATATATCGACTTTT-GCAAATCTTCATTGTACCATA-TTTCCGATTTTGAATGTACATAATATACATTATGCAT------ACAAATA-A-----------------------------------------------------------------------------------------------------------------------------------------AT-------TATC-----------------------AT---TT--------------------------------------------------------GA---------------TGT------------ATCCAATTTCATTGGA-----------------ATTTATTCAATTGCAGTTGCACT---------------------------------TG---CTGCAGCAATACAACGAGTA-CT
droAna3 scaffold_13335:3095486-3095671 - ---GACTAGACAAGTGATCCTGATCAAGAATATATAT----ACTTTATAGGGTCGGAGATGTCT-CCTTCACTGCGTTGCAC--------ACTT------TT-GACCAAAATTAAA----CCTG-------------------------------------TGGGTGTAAAACTC---------------------------CCA----------------------------------------------------CA---------TGTTAC----GGCCACTG---A--CCAAC---------------------------------------------------CTTCCACCTCATCTTCCTCAG---CTTCA---------------------------------------------------------------------------------AAA----------AACTAATGTCTTC-------------------------------------ACCAACA--------------------------------C-
droBip1 scf7180000393545:6033-6239 + ATCAACTCAGGAGGTGACCCTGATCAAGAATATATAT----ACTTTATAGGGTCGGAGATGTCT-CCTTCACTGCGTTGCAC--------ACTT------TT-GGACAAAATTATAATACCCTC-T------------GC--------------------AAGGGTATAAAAATT-A-------ATT----------------------------------------AC-----------------------------------------------CC-C---TCATTTGCA-------------------------------AGACCTTTGCTCTTCGATCA---------------------TCACTCCT---TGT---------------------------------------------------------------------------------CA----------GCATGGCT-TTAT-------------------------------------T--AA-------GCGTCGCTCCACCACCA--------C-A-
droKik1 scf7180000300339:14924-15113 + ATCGACTCGGCTGTTGATGCTGATCAAGAATATATAT----ACTTTATAGGGTCGGAAACGTCT-CCTTCACTGCGTTGCAA--------ACTT------CT-GACTGAAATTATAATACCCTG---------------C--------------------AAGGGTATAAAAATT---------------------------TTA---------CGATT-A-ACGGAGCAGGCCTGGTTA--------------TTTC--------------------------------------------------------------------------------------------AC---ATTTTCGT----------------------------------------------------------------------------------TTTAAATTTCATTAAA----------ATCGGACGTCTAT------------------------------------------------------------------------------
droFic1 scf7180000454077:244160-244350 - TTCGACTCAGATCGTGATGCTGATCAAGAATATATAT----ACTTTATGGGGTCTGAGGTGTCT-CCTTCACTGCGTTGCAA--------ACTT------CT-GGCCAAAATTATAATACCCTT--TGCT------CTGC--------------------AAGGGTATAATAAAATAAACCGTTTTTAACAATG---------A---------TAGT---------------------------------------TTA---------TGTTTAAG-----------------CTTTCGATC----------------------------------------------T----------TTCTATCAATCTT---CTT--------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------------A-G-
droEle1 scf7180000490072:6033-6255 + ATCGACTCTCCTAGTGATGCTGATCAAGAATATATAT----ACTTTATAGGGTCCGAGATGTTT-TCTTCACTGCGTTGCAA--------ACTT------CT-GACTGAAAATATAATACCCTC-T------------GC--------------------AAGGGTATAAAAACG-C-AG--TTTC-----------------CAATATCAT-------------GTG-GGCCCATGGCT--------------TTTTACTTTACT--------------------------------------------------------------------------------------CA--------------------------------------------------------------------------------------TC-------AATGTTCTTCCTAC---TGT----------------CATAAGA--CATTCTCGAGTATTTATGT-ATGC---TGATG-------------------------------CT-G-
droRho1 scf7180000779659:311332-311541 - ATCGACTCGGCTAGTGATCCTGAACAAGAATATATAT----ACTTTATAGGGTCGGAAACGCTT-CCTTCTACCTGTTACAT--------ACTT------TT-GCACGAATACAATATACCCTT-TTACT------CTACGAGTA---------------AAGGGTATAAAAATA-A--------------------------T----------------------------------------------------TTA---------AGTAGAAA---------------------------------CTTAAAATAATTAA----------------------AATACCTAATT---AAA-----------------------------------------------------GTTTTTTCTTCATTA-----------------------------T------------TCAAAAGT----------------------------------AAACTATTCA----------------------------------A-A-
droBia1 scf7180000298141:14853-15057 + ATCGACTCGGCTAGTG-TCCTGATCAATAATATATAA----ACTTTACGAGGTCGGAAACGCTT-CCTTCTACCTGTTACAT--------ACTT------TC-CGACGAATCTAGTATACCCTT-TTACT------CTACAAGTA---------------AAGGGTATAATTATATGA----------------------------------------------------GCCAATAATGTTTAATATCGAACAATTCA---------TT---------------------------------TAAAAGTTTAAAA-------AATC-----------------------T--------------------------T---------------------------------------------------------------------------------CA----------AACTGACT-TTAT-------------------------------------T--TACA--------------------------------C-
droTak1 scf7180000415858:350555-350782 + ATCGACTCGGCTAGTGACCCTGATCAAGAATATATAT----ACTTTATGGGGTCGGAAACGCTT-CCTTATAGCTGTTACAT--------ACTT------TT-GCACGAATCTAGTATACCCTT-TTACT------CTACGAGTA---------------ACGGGTATAACTAGT---------------------------CT---------TAGTTTATACATTTAC-----------------------------------------------CT-CCCAATA--CACA-------------------------------AG---------------------------------------------------------------------------------------------T-----------GG-----------------------------------------CTCGCACTTTTCGGGT--TGAA----T-------------T-TCCTT-TTCAACATGTTGGCG---CAGGAGAACAATAGC---A--T-
droEug1 scf7180000409453:9632-9856 - ATCAACTTCGCTATTGAAACTGATCAAGAACATATACATACACTATATAGGGTCGGAAACGCGC-CCTTCTACCTGTTACAT--------ACTT------TT-CAACGAATCTAATATACCCTT-TTATT------CTATGAGTA---------------AGGGGTATTAAAATA-A------TATT---------------------------------A-AACGCGCAGACATTCATA------------------T-----------------------------------------------------------ATGGA----------------------ATCAACTAACT---TAAA----------------------------------------------------TTTT--ACTCTACAA-----------------------------AT----------GACAGGTATACTT-------------------------------------TCAAAAACTCTG------------------------CT-G-
dm3 chr3LHet:1572765-1572959 - AT---------------GCCAGATCAAGAATATATAT----TCTTTATATGGTCGAAAAATCTT-CCTTCTGCCTATTATAT--------ACTT------TT-AAACGAATCTAATACCCCCTT-TTACT------CTACGAGTA---------------ACGGGTATAAAAATCGAAAC--TTTT-----------------CACCAAAGT-------------GTG-GG-------------------------------------------------------------------------------------------------------------------------------------------------------------CGTAAATTTGAAAATAAACTCATTCTG---------------TAT------------CTCAACTTTCATC------------------GCGTCTAT-------------------------------------GC-------------------------------------A-
droSim2 x:20544550-20544766 - ATCGAATCGGCTATTGATCCTGATCAGGAATATATAT----AGTTTATATGATCGGAAACGCTT-CCTTCTGCCTGTTACAT--------ACTT------TT-CAACGAACCTAGTATACCTTT-TCACA------CTACAATTA---------------ACTGGTATAATAATA-A------TATT---------------------------------A----------------------------------------------------AAA---------------------------------CTTAAAA-------AAACGGTTGTGTTTTAATTATCAGTTCTTAATT---GAA-----------------------------------------------------TTAT-----------GGCCTACATTTT------------------------------AGAATTTTCTAT-------------------------------------TCA------------------------------------A-
droSec2 scaffold_49:212379-212613 + ATCGACTCGGCTATTGATCCTGATCAAGAATATATAT----ACTTTATGTAGTCGGAAACGCTT-CCTTCTGCCTGTTATAT--------ACTT------TT-CAACGAATCTAGTATACCCTT-ATACT------ATACTAGTA---------------ACGGGTATAAAAATT-A------AACC--------------------------------------GAG-GGTCCCGGGAA--------------TTTAACATTCCTCACGTTAC--CAGACCATTG--CA--CCATCCGCTC----------------------------------------------CTTCTACT---TCTTCCTCTT---CTTCA---------------------------------------------------------------------------------AGA----------AACTAACATCTAT-------------------------------------TC---------------------------------------
droYak3 3L:9740234-9740472 + ATCGACTCGGCTATTGATCCTGATCAAGAATATATAT----ACTTGATATGGTCGGAAACGCTT-CCTTCTGCCTGTTACAT--------ACTT------TT-CAACGAATCTAGTATACCCTT-TTACT------CTACGAGTA---------------ACGGGTATAAAAATG-C------------------TGAGCTGCCAA-AGCTTTTGGCCTGCTGCGAAGCTTT---------------------------------------------------------C---------------------------------------------------------------------------------------------------------------------------TG---------------CGT------------CGCAAACTGCATTCCGATTTACGT----------------CAGAAGCAGCAGCAGC---------------------------------GG---TGGCAGCAACGTATCCTGGT-G-
droEre2 scaffold_4784:21149087-21149279 - ATCGACTCGGCTATTGATCCTGATCAATAATATATAT----ACTTTATATGGTCGGAAACCTTT-CAGTCTGCCTGTTACAT--------ACTT------TT---------CTAGTATACCCTT-TCGCT------CTACGAGTA---------------ACAGGTATAATGAAT---------------------------TTG---------T-------------------------------------------T-----------------------------------------------------------ATTGA----------------------AACAATTATTT---ACA-----------------------------------------------------CTTCTATCTCGACCA--------------------------TC------------------GCGAATGG------------------------------TCCCTATTAAAACT-------------------CCA--------T-G-

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
ATCGACTCGGCTATTGATGCTGATCAAGAATATATAT----ACTTTATGGGGTCGGAAACGATT-CCTTCTGGACGTTACAC--------ACATCCACTTTTACCACAAATCTAATATACCCCA-ATACTCAT----TTTGAGTA---------------TCGGGTATAAAAAAC---------------------------TT----------------------------------------------------TTAAATGACTCA-----C----GGTCGTTAATTCCA-----------------------------------------------------AGCCCCCAACT---TCATCTCAATCTT---CAT---------------------------------------------------------------------------------CA----------GACTGGCGTCTAT-------------------------------------TCAAACACGGTGGTG---CTGCAGCACCATAGCGTGGTGATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................AAACGATT-CCTTCTGGACGTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102020000
....................TGATCAAGAATATATAT----ACTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
................................................................................................................................CTCAT----TTTGAGTA---------------TCGGGTATAAAA......................................................................................................................................................................................................................................................................................................................................................................................................25200.051000001
dp5
ATCGACTCGGCCATTGATGCTGATCAAGAATTTATAT----ACTTTATGGGGTCGGAAACGATT-CCTTCTGGACGTTACAC--------ACATCCATTTTCACCACAAATCTAATATACCCCA-ATACTCAT----TTTGAGTA---------------TCGGGTATAATAACC---------------------------CTC---------CGAAT--------------------------------------------------ATTCC----C-----------------------------------------------------------------------AC---CTCTTTTCACCAATCCC---CCTCAGACATGGGCACACA----------------------------------------------TT---------------------------------AACAT---------------------------------------------------TGTTT---CCACAGCTCCACAA-----C-G-SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................TCGGAAACGATT-CCTTCTGGACGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420140.9028180281800000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------------------------------------------------TGTTT---CCACAGCTCCACAA-----C-G-2290.8980800000000
.................TGCTGATCAAGAATTTATAT----ACTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.7530200000100
...............................................TGGGGTCGGAAACGATT-CCTTCTGGACGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.601200000001200
.................TGCTGATCAAGAATTTATAT----ACTTTAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.5020000000200
..............................................................................................................................................................................................................................................................................................................................................................................................CATGGGCACACA----------------------------------------------TT---------------------------------AACAT---------------------------------------------------TGTT...........................2320.5010100000000
.................TGCTGATCAAGAATTTATAT----ACTTTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.5020200000000
.................TGCTGATCAAGAATTTATAT----ACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2350.4020000000200
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTT---CCACAGCTCCACAA-----C-G-21110.3640400000000
...............GATGCTGATCAAGAATTTATAT----ACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.2510010000000
..................................................................CTTCTGGACGTTACAC--------ACATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2550500000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------------------------------------------------TGTTT---CCACAGCTCCACAA-----....2090.2220200000000
......................................................................................................................................................................................................................................................................................................................................................................................................CACA----------------------------------------------TT---------------------------------AACAT---------------------------------------------------TGTTT---CCACAGA................2350.2010010000000
..........................................................................................................................................................................................................................T--------------------------------------------------ATTCC----C-----------------------------------------------------------------------AC---CTCTTTTCACCAATC................................................................................................................................................................................................2450.2010100000000
.................TGCTGATCAAGAATTTATAT----ACTTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.1710100000000
..............TGATGCTGATCAAGAATTTAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2160.1710000001000
...............................................TGGGGTCGGAAACGATT-CCTTCTGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.1530000000300
..............................................................................................................................TACTCAT----TTTGAGTA---------------TCGGG.............................................................................................................................................................................................................................................................................................................................................................................................................20200.1530300000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------------------------------------------------TGTTT---CCACAGCTCCACAA-----C-..2190.1110100000000
..............................................................TT-CCTTCTGGACGTTACAC--------ACATCCAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.1020200000000
....................................................................................................................................T----TTTGAGTA---------------TCGGGTATAATAAC....................................................................................................................................................................................................................................................................................................................................................................................................23110.0910100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT---CCACAGCTCCACAA-----C-G-18130.0810100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTT---CCACAGCTCCACAA-----C-..19130.0810100000000
................................TATAT----ACTTTATGGGGTCGGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
.............................................................ATT-CCTTCTGGACGTTAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510100000000
......................................................................................................ACCACAAATCTAATATACCCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510010000000
..............................................................................................................TCTAATATACCCCA-ATACTCAT----T........................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510010000000
droWil2
ATCAACTCAGCTTCTCATGCTGATCAAGAATATATAT----AGTTTATGGGGTTGGAAACGTCT-CCTTCTGTGCGTTACAA--------ACAT------CT-GACCAATTTAATAATACCCTC-T------------GC--------------------AAGGGTACAAAAAGT--------TATTAAAAGTGCTCAAATAAAAA-ACTACATATTTTATGACATTGCATTCCAGG--------------------------------------------------------------------------------------------------------------TAAACAAAT---TCAT---------GCTC------------------------------------------------------------------------------------AAAATACAT----------------CAAATA--------T-------------T-AAAAT-TTAAACATTTTGATA---CCATACACCCATAGG---GT-G-SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAT----------------CAAATA--------T-------------T-AAAAT-TTAAACATTT...............................2830.33101000
.......................................................................................................GACCAATTTAATAATACCCTC-T------------GC--------------------AA................................................................................................................................................................................................................................................................................................................................................................................................................2680.13101000
....................TGATCAAGAATATATAT----AGTTTATGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2690.11101000
.................................................................................A--------ACAT------CT-GACCAATTTAATAATACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2590.11110000
........................................................................TGCGTTACAA--------ACAT------CT-GACCAATTTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................26170.06101000
droVir3
ATCGACTCGGCTATTGGTGCTAATCAAGAATATATAT----ACTTTATGAGGTCGAAAAAGCTT-CCTTCTACCTGTTACAT--------ACATTGGATTTT-GCACAAATACAAAATACCCTTAATACCCATTTTCAATGGATA---------------TAGGGTATAAAAACT----------------------------------------------------------------------------------------------------------------------------------------TAAAA-------CATC-----------------------A--------------------------TC----------------------------------GA---------------AGCCTCCATTCTCGAACCAGCTTTTAAAGAG----------GCCTGGCATCTGTCCGAA--CAAC------------------------------------TGCT----CTGCACCACTCTTCAGTGGAGA-SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................T--------ACATTGGATTTT-GCACAAATACAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2521.503000000000000000000000000020001000000000000000000000000000000000
.......................TCAAGAATATATAT----ACTTTATGAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.306000000000000000000000000022000001001000000000000000000000000000
.......................TCAAGAATATATAT----ACTTTATGAGGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.306000000000000000000000000001100000002200000000000000000000000000
........................CAAGAATATATAT----ACTTTATGAGGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.204000000000000000000000000001201000000000000000000000000000000000
........................CAAGAATATATAT----ACTTTATGAGGTCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2850.201000000000000000000000000000001000000000000000000000000000000000
.......................TCAAGAATATATAT----ACTTTATGAGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.153000000000000000000000000000200000000000000000000000000000000010
........................CAAGAATATATAT----ACTTTATGAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.153000000000000000000000000200000000010000000000000000000000000000
........................CAAGAATATATAT----ACTTTATGAGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.102000000000000000000000000001001000000000000000000000000000000000
........................CAAGAATATATAT----ACTTTATGAGGTCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.102000000000000000000000000000000010010000000000000000000000000000
.........................AAGAATATATAT----ACTTTATGAGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102000000000000100000000000001000000000000000000000000000000000000
.................TGCTAATCAAGAATATATAT----ACTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000010000000000000000000000000000000000000
...........................GAATATATAT----ACTTTATGAGGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000001000000000000000000000000000000000000000000000000000000000
......................ATCAAGAATATATAT----ACTTTATGAGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000001000000000000000000000000000000000
............................AATATATAT----ACTTTATGAGGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000100000000000000000000000000000000000
......................ATCAAGAATATATAT----ACTTTATGAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000000010000000000000000000000000000
.........................AAGAATATATAT----ACTTTATGAGGTCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000100000000000000000000000000000000
droMoj3
ATCGACTCAGCTCGTCGTCCTGATCAAGAATATATAT----ACTTTAAGGGGTCTGAGATGATT-CCTTCTGCCTGTTACAT--------ACTT------TT-C-ACAAAACCATTATACCCTGATTTCCCATTTTCAATGGGTT---------------CAGGGTATAATGAAC-A---------------------------------------------------------ATGATCTTGGCTAGTCAACGGGG-------------------------------TATG---AG-----TTCCAAATTTAAA----------------------------------------------AT----------------------------------------------------------------------------------CTCTAGTTTCAGTGGG------ATCGAAATGGTTTGTAC-------------------------------------TCATACG--------------------------------C-SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.TCGACTCAGCTCGTCGTCCTGATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
......................................................TGAGATGATT-CCTTCTGCCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000010
droGri2
ATCGACTCGGCTCTAGATGCTGATCAAGAATAAATAT--AGAGCTTATGGAATCGGAAAGTTATGCCTTAT-------ATATACATATATATATCGACTTTT-GCAAATCTTCATTGTACCATA-TTTCCGATTTTGAATGTACATAATATACATTATGCAT------ACAAATA-A-----------------------------------------------------------------------------------------------------------------------------------------AT-------TATC-----------------------AT---TT--------------------------------------------------------GA---------------TGT------------ATCCAATTTCATTGGA-----------------ATTTATTCAATTGCAGTTGCACT---------------------------------TG---CTGCAGCAATACAACGAGTA-CTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
---GACTAGACAAGTGATCCTGATCAAGAATATATAT----ACTTTATAGGGTCGGAGATGTCT-CCTTCACTGCGTTGCAC--------ACTT------TT-GACCAAAATTAAA----CCTG-------------------------------------TGGGTGTAAAACTC---------------------------CCA----------------------------------------------------CA---------TGTTAC----GGCCACTG---A--CCAAC---------------------------------------------------CTTCCACCTCATCTTCCTCAG---CTTCA---------------------------------------------------------------------------------AAA----------AACTAATGTCTTC-------------------------------------ACCAACA--------------------------------C-SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................CTGCGTTGCAC--------ACTT------TT-GACCAAAATTAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.051010000
droBip1
ATCAACTCAGGAGGTGACCCTGATCAAGAATATATAT----ACTTTATAGGGTCGGAGATGTCT-CCTTCACTGCGTTGCAC--------ACTT------TT-GGACAAAATTATAATACCCTC-T------------GC--------------------AAGGGTATAAAAATT-A-------ATT----------------------------------------AC-----------------------------------------------CC-C---TCATTTGCA-------------------------------AGACCTTTGCTCTTCGATCA---------------------TCACTCCT---TGT---------------------------------------------------------------------------------CA----------GCATGGCT-TTAT-------------------------------------T--AA-------GCGTCGCTCCACCACCA--------C-A-SizeHit CountTotal NormTotal
No Reads
droKik1
ATCGACTCGGCTGTTGATGCTGATCAAGAATATATAT----ACTTTATAGGGTCGGAAACGTCT-CCTTCACTGCGTTGCAA--------ACTT------CT-GACTGAAATTATAATACCCTG---------------C--------------------AAGGGTATAAAAATT---------------------------TTA---------CGATT-A-ACGGAGCAGGCCTGGTTA--------------TTTC--------------------------------------------------------------------------------------------AC---ATTTTCGT----------------------------------------------------------------------------------TTTAAATTTCATTAAA----------ATCGGACGTCTAT------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TTCGACTCAGATCGTGATGCTGATCAAGAATATATAT----ACTTTATGGGGTCTGAGGTGTCT-CCTTCACTGCGTTGCAA--------ACTT------CT-GGCCAAAATTATAATACCCTT--TGCT------CTGC--------------------AAGGGTATAATAAAATAAACCGTTTTTAACAATG---------A---------TAGT---------------------------------------TTA---------TGTTTAAG-----------------CTTTCGATC----------------------------------------------T----------TTCTATCAATCTT---CTT--------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------------A-G-SizeHit CountTotal NormTotal
No Reads
droEle1
ATCGACTCTCCTAGTGATGCTGATCAAGAATATATAT----ACTTTATAGGGTCCGAGATGTTT-TCTTCACTGCGTTGCAA--------ACTT------CT-GACTGAAAATATAATACCCTC-T------------GC--------------------AAGGGTATAAAAACG-C-AG--TTTC-----------------CAATATCAT-------------GTG-GGCCCATGGCT--------------TTTTACTTTACT--------------------------------------------------------------------------------------CA--------------------------------------------------------------------------------------TC-------AATGTTCTTCCTAC---TGT----------------CATAAGA--CATTCTCGAGTATTTATGT-ATGC---TGATG-------------------------------CT-G-SizeHit CountTotal NormTotal
No Reads
droRho1
ATCGACTCGGCTAGTGATCCTGAACAAGAATATATAT----ACTTTATAGGGTCGGAAACGCTT-CCTTCTACCTGTTACAT--------ACTT------TT-GCACGAATACAATATACCCTT-TTACT------CTACGAGTA---------------AAGGGTATAAAAATA-A--------------------------T----------------------------------------------------TTA---------AGTAGAAA---------------------------------CTTAAAATAATTAA----------------------AATACCTAATT---AAA-----------------------------------------------------GTTTTTTCTTCATTA-----------------------------T------------TCAAAAGT----------------------------------AAACTATTCA----------------------------------A-A-SizeHit CountTotal NormTotal
No Reads
droBia1
ATCGACTCGGCTAGTG-TCCTGATCAATAATATATAA----ACTTTACGAGGTCGGAAACGCTT-CCTTCTACCTGTTACAT--------ACTT------TC-CGACGAATCTAGTATACCCTT-TTACT------CTACAAGTA---------------AAGGGTATAATTATATGA----------------------------------------------------GCCAATAATGTTTAATATCGAACAATTCA---------TT---------------------------------TAAAAGTTTAAAA-------AATC-----------------------T--------------------------T---------------------------------------------------------------------------------CA----------AACTGACT-TTAT-------------------------------------T--TACA--------------------------------C-SizeHit CountTotal NormTotal
No Reads
droTak1
ATCGACTCGGCTAGTGACCCTGATCAAGAATATATAT----ACTTTATGGGGTCGGAAACGCTT-CCTTATAGCTGTTACAT--------ACTT------TT-GCACGAATCTAGTATACCCTT-TTACT------CTACGAGTA---------------ACGGGTATAACTAGT---------------------------CT---------TAGTTTATACATTTAC-----------------------------------------------CT-CCCAATA--CACA-------------------------------AG---------------------------------------------------------------------------------------------T-----------GG-----------------------------------------CTCGCACTTTTCGGGT--TGAA----T-------------T-TCCTT-TTCAACATGTTGGCG---CAGGAGAACAATAGC---A--T-SizeHit CountTotal NormTotal
No Reads
droEug1
ATCAACTTCGCTATTGAAACTGATCAAGAACATATACATACACTATATAGGGTCGGAAACGCGC-CCTTCTACCTGTTACAT--------ACTT------TT-CAACGAATCTAATATACCCTT-TTATT------CTATGAGTA---------------AGGGGTATTAAAATA-A------TATT---------------------------------A-AACGCGCAGACATTCATA------------------T-----------------------------------------------------------ATGGA----------------------ATCAACTAACT---TAAA----------------------------------------------------TTTT--ACTCTACAA-----------------------------AT----------GACAGGTATACTT-------------------------------------TCAAAAACTCTG------------------------CT-G-SizeHit CountTotal NormTotal
No Reads
dm3
AT---------------GCCAGATCAAGAATATATAT----TCTTTATATGGTCGAAAAATCTT-CCTTCTGCCTATTATAT--------ACTT------TT-AAACGAATCTAATACCCCCTT-TTACT------CTACGAGTA---------------ACGGGTATAAAAATCGAAAC--TTTT-----------------CACCAAAGT-------------GTG-GG-------------------------------------------------------------------------------------------------------------------------------------------------------------CGTAAATTTGAAAATAAACTCATTCTG---------------TAT------------CTCAACTTTCATC------------------GCGTCTAT-------------------------------------GC-------------------------------------A-SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................TATAT--------ACTT------TT-AAACGAATCTAATACC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TAAACTCATTCTG---------------TAT------------CTCAACTT.............................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................AAATAAACTCATTCTG---------------TAT------------CTCAAC...............................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................TT------TT-AAACGAATCTAATACCCCCTT-T....................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................AATAAACTCATTCTG---------------TAT------------CTCAACTT.............................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................T------TT-AAACGAATCTAATACCCCCTT-T....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................T------TT-AAACGAATCTAATACCCCCTT-TT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................T-------------GTG-GG-------------------------------------------------------------------------------------------------------------------------------------------------------------CGTAAATTTGAAAAT...............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................T--------ACTT------TT-AAACGAATCTAATACCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................................................T--------ACTT------TT-AAACGAATCTAATACCCCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TTCTG---------------TAT------------CTCAACTTTCATC------------------GCG...................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................ACCAAAGT-------------GTG-GG-------------------------------------------------------------------------------------------------------------------------------------------------------------CGTAAATT......................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................ACCAAAGT-------------GTG-GG-------------------------------------------------------------------------------------------------------------------------------------------------------------CGTAAATTTGAA..................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................CAAAGT-------------GTG-GG-------------------------------------------------------------------------------------------------------------------------------------------------------------CGTAAATTTGAAAA................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................TT------TT-AAACGAATCTAATACCCCCTT-.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TT-----------------CACCAAAGT-------------GTG-GG-------------------------------------------------------------------------------------------------------------------------------------------------------------CGTAAATTTG....................................................................................................................................................................2611.0010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TCATTCTG---------------TAT------------CTCAACTTTCATC------------------GCG...................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................T-AAACGAATCTAATACCCCCTT-TTACT------C.........................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TTCTG---------------TAT------------CTCAACTTTCATC------------------GCGTC.................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................CAAAGT-------------GTG-GG-------------------------------------------------------------------------------------------------------------------------------------------------------------CGTAAATTTG....................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
............................................TTATATGGTCGAAAAATCTT-CCTTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TAT------------CTCAACTTTCATC------------------GCGTCTAT-------------------------------------GC-------------------------------------A-2711.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................GTA---------------ACGGGTATAAAAATCGAA................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................CTACGAGTA---------------ACGGGTATAAAAATCGAA................................................................................................................................................................................................................................................................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................TCAAGAATATATAT----TCTTTATATGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CAAGAATATATAT----TCTTTATATGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................T------CTACGAGTA---------------ACGGGTATAAAAAT....................................................................................................................................................................................................................................................................................................................................................................................................24200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................TACT------CTACGAGTA---------------ACGGGTATAAAAA.....................................................................................................................................................................................................................................................................................................................................................................................................26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................ACGAGTA---------------ACGGGTATAAAAAT....................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
...............................................................................................................................ACT------CTACGAGTA---------------ACGGGTATAAAAAT....................................................................................................................................................................................................................................................................................................................................................................................................26180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................TT-TTACT------CTACGAGTA---------------ACGGGTATAA........................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................CT------CTACGAGTA---------------ACGGGTATAAAAA.....................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................TT-TTACT------CTACGAGTA---------------ACGGGT............................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................ACT------CTACGAGTA---------------ACGGGT............................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................T-TTACT------CTACGAGTA---------------ACGGGT............................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................TT-TTACT------CTACGAGTA---------------ACGGGTATA.........................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................TT-TTACT------CTACGAGTA---------------ACGGG.............................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................T-TTACT------CTACGAGTA---------------ACGGGTAT..........................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................TTACT------CTACGAGTA---------------ACGGGT............................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
ATCGAATCGGCTATTGATCCTGATCAGGAATATATAT----AGTTTATATGATCGGAAACGCTT-CCTTCTGCCTGTTACAT--------ACTT------TT-CAACGAACCTAGTATACCTTT-TCACA------CTACAATTA---------------ACTGGTATAATAATA-A------TATT---------------------------------A----------------------------------------------------AAA---------------------------------CTTAAAA-------AAACGGTTGTGTTTTAATTATCAGTTCTTAATT---GAA-----------------------------------------------------TTAT-----------GGCCTACATTTT------------------------------AGAATTTTCTAT-------------------------------------TCA------------------------------------A-SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......TCGGCTATTGATCCTGATCAGGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2461.8311000100000010000000
......................................................................TGCCTGTTACAT--------ACTT------TT-CAACGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................25201.5030000000300000000000
................................................................................................................................................................................................................................................................................................................................................TTAATTATCAGTTCTTAATT---GAA-----------------------------------------------------TT.................................................................................................................................................2511.00100000010000000000
..............TGATCCTGATCAGGAATATATAT----AGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000010000000
.............................................................................................T------TT-CAACGAACCTAGTATACCTTT-.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
....................................T----AGTTTATATGATCGGAAACGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000000000
......TCGGCTATTGATCCTGATCAGGAATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2661.00600000001113000000
...........................GAATATATAT----AGTTTATATGATCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000010000
.....................................................................CTGCCTGTTACAT--------ACTT------TT-CAACGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.5511000000110000000000
............ATTGATCCTGATCAGGAATATATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2460.33200000000200000000
.....................................................................CTGCCTGTTACAT--------ACTT------TT-CAACGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.30600000000060000000
............................................TTATATGATCGGAAACGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.25110000000000000000
...............................................................T-CCTTCTGCCTGTTACAT--------ACTT------TT-CAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.25500000022000001000
............ATTGATCCTGATCAGGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1890.22200000000002000000
............ATTGATCCTGATCAGGAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1990.22200000000002000000
............ATTGATCCTGATCAGGAATATATAT----A........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2650.20100000000010000000
...........TATTGATCCTGATCAGGAATATATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.17100000000100000000
......TCGGCTATTGATCCTGATCAGGAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.17100000000001000000
......TCGGCTATTGATCCTGATCAGGAATAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2760.17100000000001000000
......TCGGCTATTGATCCTGATCAGGAATAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2780.13100000000001000000
.......CGGCTATTGATCCTGATCAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.13100100000000000000
...............GATCCTGATCAGGAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16170.12200000000002000000
............ATTGATCCTGATCAGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17100.10100000000100000000
..............................................................TT-CCTTCTGCCTGTTACAT--------ACTT------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10200000000200000000
..............................................................TT-CCTTCTGCCTGTTACAT--------ACTT------TT-C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.10200000000000020000
......TCGGCTATTGATCCTGATCAGGAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25110.09100000000001000000
......TCGGCTATTGATCCTGATCAGGAATGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28120.08100000000000010000
.........GCTATTGATCCTGATCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18130.08110000000000000000
.....................................................CGGAAACGCTT-CCTTCTGCCTGTTACAT--------ACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................31200.05100000010000000000
...........................................................CGCTT-CCTTCTGCCTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.05100000001000000000
..................................................................CTTCTGCCTGTTACAT--------ACTT------TT-CAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000000010000000
..............................................................TT-CCTTCTGCCTGTTACAT--------ACTT------TT-CAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05100000000000010000
.....................................................................CTGCCTGTTACAT--------ACTT------TT-CAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100000010000000000
..................................................................CTTCTGCCTGTTACAT--------ACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100000000010000000
droSec2
ATCGACTCGGCTATTGATCCTGATCAAGAATATATAT----ACTTTATGTAGTCGGAAACGCTT-CCTTCTGCCTGTTATAT--------ACTT------TT-CAACGAATCTAGTATACCCTT-ATACT------ATACTAGTA---------------ACGGGTATAAAAATT-A------AACC--------------------------------------GAG-GGTCCCGGGAA--------------TTTAACATTCCTCACGTTAC--CAGACCATTG--CA--CCATCCGCTC----------------------------------------------CTTCTACT---TCTTCCTCTT---CTTCA---------------------------------------------------------------------------------AGA----------AACTAACATCTAT-------------------------------------TC---------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.TCGACTCGGCTATTGATCCTGATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24201.903838000
.............................ATATATAT----ACTTTATGTAGTCGGAAACGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0011000
.............................ATATATAT----ACTTTATGTAGTCGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
.............................................................................................T------TT-CAACGAATCTAGTATACCCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................23201.002020000
.TCGACTCGGCTATTGATCCTGATCAAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.4088000
.............................................................................................T------TT-CAACGAATCTAGTATACCCTT-AT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.3311000
.............................................................................................T------TT-CAACGAATCTAGTATACCCTT-.....................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.2550032
.............................................................................................T------TT-CAACGAATCTAGTATACCCTT-A....................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.1711000
.TCGACTCGGCTATTGATCCTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020020
.TCGACTCGGCTATTGATCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510010
..CGACTCGGCTATTGATCCTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0511000
.....CTCGGCTATTGATCCTGATCAAGAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0511000
............................................................................................TT------TT-CAACGAATCTAGTATACCCTT-.....................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0511000
..CGACTCGGCTATTGATCCTGATCAAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0511000
.......CGGCTATTGATCCTGATCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100
.TCGACTCGGCTATTGATCCTGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100
.TCGACTCGGCTATTGATCCTGATCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510010
.TCGACTCGGCTATTGATCCTGATCAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510010
................................................................................AT--------ACTT------TT-CAACGAATCTAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100
.............................................................................................T------TT-CAACGAATCTAGTATACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0511000
droYak3
ATCGACTCGGCTATTGATCCTGATCAAGAATATATAT----ACTTGATATGGTCGGAAACGCTT-CCTTCTGCCTGTTACAT--------ACTT------TT-CAACGAATCTAGTATACCCTT-TTACT------CTACGAGTA---------------ACGGGTATAAAAATG-C------------------TGAGCTGCCAA-AGCTTTTGGCCTGCTGCGAAGCTTT---------------------------------------------------------C---------------------------------------------------------------------------------------------------------------------------TG---------------CGT------------CGCAAACTGCATTCCGATTTACGT----------------CAGAAGCAGCAGCAGC---------------------------------GG---TGGCAGCAACGTATCCTGGT-G-SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTACGT----------------CAGAAGCAGCAGC................................................................2211.00100000010000
.............................................................................................T------TT-CAACGAATCTAGTATACCCTT-TT...................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.20404000000000
............................................TGATATGGTCGGAAACGCTT-CCTTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25160.06100100000000
.......................................................................................................CAACGAATCTAGTATACCCTT-T....................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000000000
...................................................................................................................TATACCCTT-TTACT------CTACGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
.................................................................................................................................T------CTACGAGTA---------------ACGGGTATAAAAATG-..................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000000000
....................................................TCGGAAACGCTT-CCTTCTGCCTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100100000000
..............................................................................................................................TACT------CTACGAGTA---------------ACGGGTATAA........................................................................................................................................................................................................................................................................................................................................................................................................23200.05100010000000
droEre2
ATCGACTCGGCTATTGATCCTGATCAATAATATATAT----ACTTTATATGGTCGGAAACCTTT-CAGTCTGCCTGTTACAT--------ACTT------TT---------CTAGTATACCCTT-TCGCT------CTACGAGTA---------------ACAGGTATAATGAAT---------------------------TTG---------T-------------------------------------------T-----------------------------------------------------------ATTGA----------------------AACAATTATTT---ACA-----------------------------------------------------CTTCTATCTCGACCA--------------------------TC------------------GCGAATGG------------------------------TCCCTATTAAAACT-------------------CCA--------T-G-SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.TCGACTCGGCTATTGATCCTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000010

Generated: 06/08/2015 at 04:01 PM