ID:

dpe_1246

 Coordinate:

scaffold_247:21741-21891 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.6 -8.3 -8.3

Flybase annnotation

CDS [Dper\GL11742-cds]; exon [dper_GLEANR_11892:7]; intron [Dper\GL11742-in]

No Repeatable elements found

mature
star
  1. dpe_1246  scaffold_247:21775-21798 +
  2. dpe_687  scaffold_11187:371-394 -
  3. scaffold_2360:4367-4390 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TGCTACACAAATAGCTGGCCCAAACGCCAGTGGATTACTTCGAGCGCCTGGTTAACATATTTCTGCACGTAGTGATTCACATCATCAGCTTCTAAATGGGTCTGATGGCCATCAGTCCAACGTTGGAGAGTTCCCAAAGAGTAAGGATTTGGATTTGATTCCATTACCGACCACCACCACTAATGCCATCATCGCTTTTAGCTGATGCCATACAATGCTGATTTGGATGTCATTCTGAAGGTAATGAATGT
****************************************************.............................(((((((.(((.....))).)))))))*********************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V042
embryo
 V111
male body
....................................................TAACATATTTCTGCACGTAGTGATT.............................................................................................................................................................................. 25 0 1 60.00 60 59 0 1 0
....................................................TAACATATTTCTGCACGTAGTGAT............................................................................................................................................................................... 24 0 1 6.00 6 6 0 0 0
..................................................................................................................................................................................................................TACAATGCTGATTTGGATGTCATTC................ 25 0 4 3.00 12 12 0 0 0
....................................................TAACATATTTCTGCACGTAGTGATTC............................................................................................................................................................................. 26 0 1 3.00 3 3 0 0 0
....................................................................................TCAGCTTCTAAATGGGTCTGATGG............................................................................................................................................... 24 0 3 2.67 8 8 0 0 0
.........................................................TATTTCTGCACGTAGTGATTCACATCA....................................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0
....................................................................................................................................................................TACCGACCACCACCACTAATGCCATCA............................................................ 27 0 2 2.00 4 4 0 0 0
.....................AAACGCCAGTGGATTACTTCGAGCGCCT.......................................................................................................................................................................................................... 28 0 2 2.00 4 0 4 0 0
.....................................................AACATATTTCTGCACGTAGTGATT.............................................................................................................................................................................. 24 0 1 2.00 2 2 0 0 0
....................................................................................TCAGCTTCTAAATGGGTCTGATGGCCA............................................................................................................................................ 27 0 3 1.67 5 5 0 0 0
.....................................................................................CAGCTTCTAAATGGGTCTGATGG............................................................................................................................................... 23 0 3 1.67 5 4 0 1 0
....................................................................................TCAGCTTCTAAATGGGTCTGATGGC.............................................................................................................................................. 25 0 3 1.67 5 4 0 1 0
....................................................................................................................................................................TACCGACCACCACCACTAATGCCAT.............................................................. 25 0 2 1.50 3 3 0 0 0
...................................................................................................................TCCAACGTTGGAGAGTTCCCAAAGAG.............................................................................................................. 26 0 3 1.33 4 4 0 0 0
..................................................................................................................................................................................................................TACAATGCTGATTTGGATGTCAT.................. 23 0 4 1.25 5 5 0 0 0
....................................................................................................................................................................TACCGACCACCACCACTAATGCCATCAT........................................................... 28 0 2 1.00 2 2 0 0 0
.....................................................AACATATTGCTGCACGTAGTGATA.............................................................................................................................................................................. 24 2 1 1.00 1 1 0 0 0
.......................................................................................................................................................................................................................TGCTGATTTGGATGTCATTCTGAAGG.......... 26 0 4 1.00 4 0 4 0 0
.....................................................AACATATTTCTGCACGTAGTGA................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0
....................................................TAACATATTTCTGCACGTAGTGA................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0
....................................................TAACATATTTCTACACGTAGTGATT.............................................................................................................................................................................. 25 1 1 1.00 1 1 0 0 0
....................................................TAACATATCTCTGCACATAGTGAT............................................................................................................................................................................... 24 2 1 1.00 1 1 0 0 0
....................................................TAACATATGTCTGCACGTAGTGATT.............................................................................................................................................................................. 25 1 1 1.00 1 1 0 0 0
....................................................TAACATATATCTGCACGTAGTGATT.............................................................................................................................................................................. 25 1 1 1.00 1 1 0 0 0
....................................................TAACATATTTCTGCACGTAGTGATTCACA.......................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0
....................................................GAACATATTTCTGCACGTAGTGATT.............................................................................................................................................................................. 25 1 1 1.00 1 1 0 0 0
......................................................................................................................AACGTTGGAGAGTTCCCAAAGAG.............................................................................................................. 23 0 3 0.67 2 2 0 0 0
.....................................................................................CAGCTTCTAAATGGGTCTGATGGC.............................................................................................................................................. 24 0 3 0.67 2 2 0 0 0
.............................................................................CACATCATCAGCTTCTAAATGGG....................................................................................................................................................... 23 0 3 0.67 2 2 0 0 0
...............TGGCCCAAACGCCAGTGGATTACTT................................................................................................................................................................................................................... 25 0 3 0.67 2 2 0 0 0
.........................GCCAGTGGATTACTTCGAGCGCCTG......................................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0
..................................................................................................................................................................................................................TACAATGCTGATTTGGATGTCATT................. 24 0 4 0.50 2 2 0 0 0
........................CGCCAGTGCATTACTTCGAGCGC............................................................................................................................................................................................................ 23 1 2 0.50 1 1 0 0 0
....................................................................................................................................CCCAAAGAGTAAGGATTTGG................................................................................................... 20 0 2 0.50 1 1 0 0 0
..........................CCAGTGGATTACTTCGAGCGCC........................................................................................................................................................................................................... 22 0 2 0.50 1 0 1 0 0
..........................CCAGTGGATTACTTCGAGCGCCTT......................................................................................................................................................................................................... 24 1 2 0.50 1 1 0 0 0
..................................................................................................................................................................................................................TACAATGCTGATTTGGATGTCATTCT............... 26 0 4 0.50 2 2 0 0 0
..........................CCAGTGGATTACTTCGAGCGCCTG......................................................................................................................................................................................................... 24 0 2 0.50 1 1 0 0 0
........................CGCCAGTGGATTACTTCGAGCGCCTGG........................................................................................................................................................................................................ 27 0 2 0.50 1 1 0 0 0
..........................CCAGTGGATTACTTCGAGCGCCT.......................................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0
....................CAAACGCCAGTGGATTACTTCGAGCGC............................................................................................................................................................................................................ 27 0 2 0.50 1 1 0 0 0
......................................................................................................................................................................................................TAGCTGATGCCATACAATGCTGATT............................ 25 0 4 0.50 2 2 0 0 0
..................................................................................................................................TTCCCAAAGAGTAAGGATTTG.................................................................................................... 21 0 2 0.50 1 1 0 0 0
.....................................................................................................................................................................................GATACCATCATCGCTTTTAGCC................................................ 22 3 2 0.50 1 0 0 1 0
....................................................................................................................................................................TACCGACCACCACCACTAATGCCA............................................................... 24 0 2 0.50 1 1 0 0 0
........................CGCCAGTGGATTACTTCGAGCGCCTG......................................................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0
........................................................................................................................................AAGAGTAAGGATTTGGATTTGATTC.......................................................................................... 25 0 2 0.50 1 0 1 0 0
..............................TGGATTACTTCGAGCGCCTG......................................................................................................................................................................................................... 20 0 2 0.50 1 1 0 0 0
................................................................................................................................................................................................CGCTTTTAGCTGATGCCATACAATG.................................. 25 0 2 0.50 1 1 0 0 0
..........................CCAGTGGATTACTTCGAGCGCCTGGT....................................................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0
....................................................................................................................................................................TACCGACCACCACCACTAATGCCATCATC.......................................................... 29 0 2 0.50 1 1 0 0 0
.........................GCCAGTGGATTACTTCGAGCGCCT.......................................................................................................................................................................................................... 24 0 2 0.50 1 0 1 0 0
...............................................................................................................TCAGTCCAACGTTGGAGAGA........................................................................................................................ 20 1 3 0.33 1 1 0 0 0
...............TGGCCCAAGCGCCAGTGGATTACTT................................................................................................................................................................................................................... 25 1 3 0.33 1 1 0 0 0
....................................................................................TCAGCTTCTAAATGGGTCTGATGGAA............................................................................................................................................. 26 2 3 0.33 1 1 0 0 0
..................................................................................................................GTCCAACGTTGGAGAGTTCCCAAAGAG.............................................................................................................. 27 0 3 0.33 1 1 0 0 0
...........................................................................................CTAAATGGGTCTGATGGC.............................................................................................................................................. 18 0 3 0.33 1 1 0 0 0
.........................................................................................................TGGCCATCAGTCCAACGTTGGAGA.......................................................................................................................... 24 0 3 0.33 1 0 1 0 0
....................................................................................................................CCAACGTTGGAGAGTTCCCAAAGAG.............................................................................................................. 25 0 3 0.33 1 1 0 0 0
...........................................................................................................................................................TGATTCCATTACCGACCACCACCA........................................................................ 24 0 3 0.33 1 1 0 0 0
....................................................................................TCAGCTTCTAAATGGGTCTGATGGCCAT........................................................................................................................................... 28 0 3 0.33 1 1 0 0 0
...............................................................................................................TCAGTCCAGCGTTGGAGAGTTCCCAA.................................................................................................................. 26 1 3 0.33 1 1 0 0 0
............................................................................................TAAATGGGTCTGATGGCCATCAGTCC..................................................................................................................................... 26 0 3 0.33 1 1 0 0 0
........................CGCCAGTGGATTACTTCGAG............................................................................................................................................................................................................... 20 0 3 0.33 1 1 0 0 0
................................................................................................TGGGTCTGATGGCCATCAGTC...................................................................................................................................... 21 0 3 0.33 1 1 0 0 0
..........................................................................................................GGCCATCAGTCCGACGTTGGAGAGT........................................................................................................................ 25 1 3 0.33 1 0 1 0 0
....................CAAACGCCAGTGGATTACTTCGA................................................................................................................................................................................................................ 23 0 3 0.33 1 1 0 0 0
............................................................................TCACATCATCAGCTTCTAAATGGGTC..................................................................................................................................................... 26 0 3 0.33 1 1 0 0 0
..........................................................................................................GGCCATCATTCCAACGTTGGAGAGT........................................................................................................................ 25 1 3 0.33 1 1 0 0 0
...................................TACTTCGAGCGCCTGGTTA..................................................................................................................................................................................................... 19 0 3 0.33 1 1 0 0 0
...................................................................................ATCAGCTTCTAAATGGGTCTGATG................................................................................................................................................ 24 0 3 0.33 1 1 0 0 0
.............................................................................................................CATCAGTCCAACGTTGGAGAGTT....................................................................................................................... 23 0 3 0.33 1 1 0 0 0
.....................AAACGCCAGTGGATTACTTCGAGCGA............................................................................................................................................................................................................ 26 1 3 0.33 1 1 0 0 0
..........................CCAGTGGATTACTTCGAGCG............................................................................................................................................................................................................. 20 0 3 0.33 1 1 0 0 0
.............................................................................CACATCATCAGCTTCTAAATGGGTC..................................................................................................................................................... 25 0 3 0.33 1 1 0 0 0
............................................................................TCACATCAACAGCTTCTAAATGG........................................................................................................................................................ 23 1 3 0.33 1 1 0 0 0
.........................GCCAGTGGATTACTTCGAGC.............................................................................................................................................................................................................. 20 0 3 0.33 1 1 0 0 0
............................................................................................TAAATGGGTCTGATGGCCATCAGTC...................................................................................................................................... 25 0 3 0.33 1 1 0 0 0
....................CAAACGCCAGTGGATTACTTCGAGCG............................................................................................................................................................................................................. 26 0 3 0.33 1 1 0 0 0
...............................................................................................................TCAGTCCAACGTTGGAGAGTTCCCA................................................................................................................... 25 0 3 0.33 1 1 0 0 0
...............................................................................................................TCAGTCCAACGTTGGAGAGTTCCCAA.................................................................................................................. 26 0 3 0.33 1 1 0 0 0
..........................................................................................TCTAAATGGGTCTGATGGCCATCAGTC...................................................................................................................................... 27 0 3 0.33 1 1 0 0 0
......................................................................................................TGATGGCCATCAGTCCAACGTTGG............................................................................................................................. 24 0 3 0.33 1 1 0 0 0
.................................................................................TCATCAGCTTCTAAATGGGTCT.................................................................................................................................................... 22 0 3 0.33 1 1 0 0 0
................................................................................................................................................................................................................CATACAATGCTGATTTGGATGTCATTC................ 27 0 4 0.25 1 1 0 0 0
.....................................................................................................................................................................................................TTAGCTGATGCCATACAATGCTGATT............................ 26 0 4 0.25 1 1 0 0 0
..............................................................................................................................................................................................................................TTGGATGTCATTCTGAAGG.......... 19 0 4 0.25 1 1 0 0 0
......................................................................................................................................................................................................................ATGCTGATTTGGATGTCATTCTGAAGG.......... 27 0 4 0.25 1 0 1 0 0
.......................................................................................................................................................................................................................TGCTGATTTGGATGTCATTCTGAAG........... 25 0 4 0.25 1 1 0 0 0
.....................................................................................................................................................................................................TTAGCTGATGCCATACAATGCTGATTT........................... 27 0 4 0.25 1 1 0 0 0
..................................................................................................................................................................................................................TACAATGCTGATTTGGATG...................... 19 0 4 0.25 1 1 0 0 0
......................................................................................................................................................................................................GAGCTGATGCCATACAATGCTGATT............................ 25 1 4 0.25 1 1 0 0 0
..................................................................................................................................................................................................................TACAATGCTGATTTGGATTTCATTC................ 25 1 4 0.25 1 1 0 0 0
...................................................................................................................TCCAACGTTGGAGAGTTCCCAG.................................................................................................................. 22 1 4 0.25 1 1 0 0 0
..............................................................................................................................................................................................................................TTGGATGTCATTCTGAAGGTAATGAA... 26 0 4 0.25 1 1 0 0 0
..................................................................................................................................................................................................................TACAATGCTGATTTGGATGTCATTCTGA............. 28 0 4 0.25 1 1 0 0 0
...................................................................................................................................................................................................................ACAATGCTGATTTGGATGTCATTCTGA............. 27 0 4 0.25 1 1 0 0 0
....................................................................................................................................................................................................TTTAGCTGATGCCATACAATGCTGA.............................. 25 0 4 0.25 1 1 0 0 0
.....................................................................................................................................................................................................TTAGCTGATGCCATACAATGCTGAT............................. 25 0 4 0.25 1 1 0 0 0
..................................................................................................................................................................................................................TACAATGCTGATTTGGATGTCA................... 22 0 4 0.25 1 1 0 0 0
........................................................................................................................................................................................................................GCTGATTTGGATGTCATTCTGAAGG.......... 25 0 4 0.25 1 1 0 0 0
..................................................................................................................................................................................................................TACAATGCTGATTTGGATGTCATTCTG.............. 27 0 4 0.25 1 1 0 0 0
..........................................................................................................................................................................................................................TGATTTGGATGTCATTCTGAAGGTAAA...... 27 1 4 0.25 1 1 0 0 0
..................................................................................................................................................................................................................TACAAAGCTGATATGGAT....................... 18 2 10 0.20 2 0 2 0 0
...............................................................................................................TCAGTACAAAGGTGGAGAG......................................................................................................................... 19 3 20 0.05 1 0 0 0 1

Anti-sense strand reads

ACGATGTGTTTATCGACCGGGTTTGCGGTCACCTAATGAAGCTCGCGGACCAATTGTATAAAGACGTGCATCACTAAGTGTAGTAGTCGAAGATTTACCCAGACTACCGGTAGTCAGGTTGCAACCTCTCAAGGGTTTCTCATTCCTAAACCTAAACTAAGGTAATGGCTGGTGGTGGTGATTACGGTAGTAGCGAAAATCGACTACGGTATGTTACGACTAAACCTACAGTAAGACTTCCATTACTTACA
***********************************************************************************************************************************************.............................(((((((.(((.....))).)))))))**************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V057
head
 V042
embryo
.......................................................................................................................................................CTAAACTAAGGTAATGGCTGGTG............................................................................. 23 0 3 0.67 2 2 0 0
..........TATCGACCGGGTTTGCGGTCACCTAAT...................................................................................................................................................................................................................... 27 0 2 0.50 1 1 0 0
.................................................................................................................................CAAGGGTTTCTCATTCCTAAACCTAAACT............................................................................................. 29 0 2 0.50 1 1 0 0
......................................AAGCTCGCGGACCAATTGTATAAA............................................................................................................................................................................................. 24 0 3 0.33 1 1 0 0
.........................................CTCGCGGACCAATTGTATAAAGACG......................................................................................................................................................................................... 25 0 3 0.33 1 1 0 0
........................................................................................................................................................TAAACTAAGGTAATGGCTGGTG............................................................................. 22 0 3 0.33 1 1 0 0
........................................GCTCGCGGACCAATTGTATAAA............................................................................................................................................................................................. 22 0 3 0.33 1 1 0 0
.....................................GAAGCTCGCGGACCAATTGTATAAA............................................................................................................................................................................................. 25 0 3 0.33 1 1 0 0
...............CCCGGGTTTGCGGTCACCTAAT...................................................................................................................................................................................................................... 22 1 3 0.33 1 1 0 0
...........................................................................................................CGGTAGTCAGGTTGCAACCTC........................................................................................................................... 21 0 3 0.33 1 1 0 0
........................................................................................................................................................................................................CGACTACGGTATGTTACGA................................ 19 0 4 0.25 1 1 0 0
....................................................................................................................................................................................................................GTTACGACTAAACCTACAGTAAGACT............. 26 0 4 0.25 1 1 0 0
..................................................................................................................................................................................................GAAAATCGACTACGGTATGTTACGAC............................... 26 0 4 0.25 1 1 0 0
....................................................................................AGTCGAAGGTTTTCCCAGAAT.................................................................................................................................................. 21 3 6 0.17 1 0 1 0
...................................................................................TAGTCGAAGGTTTTCCTAGACT.................................................................................................................................................. 22 3 6 0.17 1 0 0 1
...................................................................................TAGTCGAAGGTTTTACCAGACT.................................................................................................................................................. 22 3 6 0.17 1 0 1 0
...................................................................................TCGTCGAAAGTTTACCCAGACT.................................................................................................................................................. 22 3 6 0.17 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_247:21691-21941 + dpe_1246 TGCTACACAAATAGCTGGCCCAAACGCCAGTGGATTACTTCGAGCGCCTGGTTAACATATTTCTGCACGTAGTGATTCACATCATCAGCTTCTAAATGGGTCTGATGGCCATCAGTCCAA---CGTTGGAGAGTTCCCAAAGAGT-----AAGGATTTGG----------------ATTTGATTCCA-TTACCGAC------CACCACCACTAAT--------G-----C-CATCATCGCTTTTAGCTGATGCCATACAATGCTGATTTGGATGTCATTCTGAAGGTAATG-AATGT
dp5 XR_group8:794162-794412 - TGCTACACAAATGGCTGGCCCAAACGCCAGTGGATTACTTCGAGCGCCTGGTTAACATATTTCTGCACGTGGTGATTCACATCATCAGCTTCAAAATGGGTCTGATGGCCACCAGTCCAA---CGTTGGAGAGTTCCCAAGAGGT-----GAGGATTTGG----------------ATTTGATTTCA-TTACCGAC------CACCACCACTAAC--------G-----C-CATCATCCCTTTTAGCTGATGCCATACAATGCTGATTTGGATGTCATTCTGAAGGTAATG-AATGT
droWil2 scf2_1100000004768:990993-991253 - TCCTGAAGAAATGGTGGAGTCAAACGCCCATGGAATACTATGAGCATATGGTCAATAATTATTTGCATGTGGTCGTTCATATAGTTAGTTTTAAAATGGGTTTAAGTGTCCTAAATCATCAAGCATTGGAAACACAACAGAGGGT-----AATCTAACGT-----------GCTAAATTTAATTTCATATTT----GTTTCAACCTGTTTTTTATTTCT---------------CCTGATTATCAGTTGTTGCCCTACAATTTGGAATTGGAGGTGATCTTGAGACTGCTT-CAATA
droVir3 scaffold_13049:8535104-8535362 - TGCTGGAGAAATGGTGGGGTCAGACGCCGTCCGATTATTTCGAACAAATGGTCAACAATTTTCTGCACGTGACGATGCACATCATCAGCTTTAAGCTGGGCATCGAGGTAATCAATCAAA---ATGAGCCGCGTCAGAAAAAGGT-----AATCGTACAC----AACCATTTTCTTATCCT-GCCCCGTCAT----TTATTAATCTAAGCCTA--------------------TCGCGCCTATTAGCTGCTACCCTACAATAGAGATCTGGAAGCGGTGCTGCGACTGCTG-GAGAA
droMoj3 scaffold_6680:6805099-6805358 + TGTTAGAAAAATGGTGGGCTCAAACGCCGTCTGAATACTTTGAGCAAATGGTCAATAACTTTTTGCATGTGGCGATGCACATCATCAGCTTTAAAATGGGCATTGAGGTGATCAATCACA---ATGAACCGCGTCAGAAGAAGGT-----AATCGTATGC----ATCTATTTTCCAATACT-TTTCACCTAC----TTACTAATCAATGCCAAATACGT--------------------ATCTTAGCTGTTGCCCTACAGCAGTGATCTGGAGGCTGTCCTACGATTTTTGACAAAT
droGri2 scaffold_15110:7554453-7554697 - TGCTGGAGAAATGGTGGGGTCAAACACCATCGGAGTATTTTGAGCATATGGTGAACAGTTTTCTACATGTTGCCATGCACATTATTAGCTTCAAGATGGGCATCGAGGTGATCAATACCA---ATGAGCCGCGCCAGAAAAGGGT-----AGGCATA--------------TCGCAATCAA--TCTC-TGACCAAG------TATAATTCATAATGCTT--------------------CTCTTAGGTTTTGCCCTACAACAGCGATCTGGAGACTGTGCTGCGTCTGTTG-GCGCA
droAna3 scaffold_13337:6598204-6598451 - TTCTCATGAGATGGTTGGCCCAAACGCCAGCGGATTACTTTGAGCATATTGTCCAGAACTTCTTACATGTAGTTATTCATATTATAAGTTTTAAAATGGGATTGGCGGCCGTAAATCCCG---CTGCCGAGAGACATCAAAGGGT-----AGGATTCTT--------------TCCATTTT--ACTC---ATAAAA------T---ATTTATAATT-------GTT---AT-TTT-ACATTTTTAGCTACTGCCATACAACTCTGAACTGGAGACTATCCTGAAAATGATG-CAGAC
droBip1 scf7180000396709:329672-329923 - TTCTTATGAAGTGGTTGGCCCAAACGCCGGCGGATTACTTCGAGCATATTGTCCAAAACTTCTTGCATGTAGTCATTCATATTATAAGTTTTAAAATGGGTTTGGCGGCCATCAATTCCT---CTGCCGAGAGACAACAAAGGGT-----AAGGCTTTCA---------------AATCTT--TCGC---TTTAAA------T----------ATTTATAATTACTTTGTTTTCACATTCTTCTAGCTGCTACCATACAACAAGGAACTGGAGACAATCCTGAAAATGATG-CAGAC
droKik1 scf7180000302441:1988452-1988696 - TGCTGATGAAGTGGCTGGCCCAAACGCCAACGGAGTACTTTGAGCATTTGGTACAAAACTTTCTGCATGTCGTAGTCCACATAATAAGCTTCAAAATGGGCCTGGCTGTGGTCAATCCCT---CCGCCGAGAGACGTCAAAGGGT-----ATTATG---------------TTTGAATATATATCTTTGTGA----AA----GTGAATAATGTTTCCGT--------------------TCTGCAGCTGCTGCCCTACAGCTCCGAGCTGGAGGTGATCCTCAAGCTGATC-TCAAC
droFic1 scf7180000454113:764464-764711 - TGCTGATTAAGTGGCTAGCTCTAACGCCAACGGATTACTTTGAACATCTTGTCCAAAACTTTTTGCACGTGGTAGTGCACATTATTAGCTTTAAAATGGGCTTGGCAGTGGTCAATCCCA---CTGCCGAAAGGCGTCAAAGAGT-----AAGTAGT--------------TTGAAT-----GGGAATAATT----TTGTCTATGATAGCTCA-A--------A-----C-TTTTAT--ATTGTAGCTGCTGCCATATAACACAGAGCTAGAGGTGATCCTGAAGTTGATG-CAGAC
droEle1 scf7180000491249:4309109-4309353 - TGCTAATCAAGTGGCTGGCCCAAACGCCAGCGGAATACTTTGAGCATCTTGTCCAAAACTTTTTGCACGTCGTGGTGCACATTATAAGCTTCAAAATGGGATTGGCCGCCGTCAGTCCCA---GTGCCGAAAGACGCCAGAGGGC-----AAGTGTTACT-----------CTTGGATTTAATTTTCAATTT----GTGCTGATCCT-------------------------TTT---CCATCCAGCTGCTGCCATATAACACCGAACTGGAGGTGATCCTAAAGTTGATG-CAGAC
droRho1 scf7180000779696:34708-34965 - TACTAATAAAGTGGCTGGCTCAAACGCCATCGGAATACTTTGAGCATCTTGTCCAGAACTTTCTGCATGTCGTGGTGCACATTATAAGCTTCAAAATGGGTTTGGCAGCCGTCAATCCCA---GTGCCGAAAGACGTCAGAGGGC-----AAGTATTTCTGCAGG------TCTTAATTTGATCTCAAATTT----GTTCTAATCATAGTTCCTCTAAC--------------------ATTTCAGCTGCTGCCATACAACACTGAGTTGGAGGTGATCCTAAAGTTGATG-CAGAC
droBia1 scf7180000300910:1419763-1420008 + TGCTGATCAAGTGGCTGGCCCAAACGCCGGCTGAGTACTTTGAGCATCTTGTCCAGAACTTCTTGCACGTGGTTGTGCACATAATTAGCTTTAAAATGGGCTTGACTGCCGTCAGTCCCA---GCGCCGAAATTCGAAATTCGGTAGGGTATCCGTA-------------------ATCAAATATGA----A----ATGTATGCTAATTTCCTACTGCC--------------------GTTTCAGCTGCTGCCATACAACACCGAGCTGGAGGTGATCCTGAAGCTGATG-CATAC
droTak1 scf7180000414671:299706-299951 + TGCTGATGAAGTGGCTCTCGCAAACGCCGGCTGAATACTTTGAGCATCTTGTCCAGAACTTCTTGCACGTAGTTGTGCACATTATAAGCTTCAAAATGGGCTTGGCGGCGGTCAATCCGA---GCGCCGAAAGGCGTCATAGGGT-----ATATAAT--------------TTACAAAACAATATGA----A----GTATAAGCTAATTCCCTGCTCAT--------------------CCTACAGCTACTGCCATACAACAAGGAACTGGAGGTGATCCTGAAGCTGATG-CAAAC
droEug1 scf7180000409007:139261-139513 + TGTTGATAAAGTGGCTGTCCCAAACAACAGCTGAGTACTTTGAGCATCTTGTCCAGAACTTCTTGCACGTTGTTATCCATATAATTAGTTTCAATATGGGCTTGACTGCCGTCAGTCCCA---GTGCCGAGAGGCGTCACAGGGC-----AAGTAAT--------------TTTCAATTTAATTTTG-ACCT----GTGCTAATCTAGTTTCCACCT----------------TTGTATATTCCAGTTGCTGCCACATAACACTGAGTTAGAGGTGATCCTAAAGCTTTTG-CAAAC
dm3 chr3L:1316185-1316434 + TGCTGAACAAGTGGTTGGCCCAAACACCGGCTGAATACTTCGAGCATCTTGTCCAGAACTTCTTGCATGTTGTCATCCATATTATAAGTTTCAAAATGGGCTTGGCTGCCGCTAGTCCCA---GCGCCGAAAGACGTCAACAGGT-----ATTTAGA--------------TTTCAATATAGGGCCATACCA----GTGTCAATTAATTCTCTATTCAT--------------------AATCTAGCTGCTGCCATATAACACTGAACTCGAGATCATTCTAAAGCTGATG-AAAAC
droSim2 3l:1240242-1240491 + TGCTGAGCAAGTGGTTGGCCCAAACACCGACTGAATACTTCGAGCATCTTGTCCAGAACTTCTTGCATGTTGTCGTCCATATTATAAGTTTCAAAATGGGCTTGGCTGCCGCTAGTCCCA---GAGCCGAAAGGCGTCAACAGGT-----ATTTAGA--------------TTTCAATATAGGGCCACACCA----GTGTCAATTAATTCTCTATTCAT--------------------AATCTAGCTGCTGCCATATAACACTGAACTCGAGGTGATTCTTACGCTGATG-AAAAC
droSec2 scaffold_2:1358938-1359187 + TGCTGAGCAAGTGGTTGGCCCAAACACCGACTGAATACTTCGAGCATCTTGTCCAGAACTTCTTGCATGTTGTCGTCCATATTATAAGTTTCAAAATGGGCTTGGCTGCCGCTAGTCCCA---GAGCCGAAAGGCGTCAACAGGT-----ATTTAGA--------------TTTCAATATAGGGCCACACCA----GTGTCAATTAATTCTCTATTCAT--------------------AATCTAGCTGCTGCCATATAACACTGAACTCGAGGTGATTCTTACGCTGATG-AAAAC
droYak3 3L:1274939-1275188 + TGCTGATCAAGTGGCTGGCCCAAACTCCGGCTGAATACTTTGAGCGCCTTGTCCAGAACTGCTTAAATGTTGTCGTCCATATTATTAGTTTCAAAATGGGCTTGGCTGCCATTAGTCCCA---GCGTGGAAAGACGTCAAAGGGT-----AATTACG--------------TTTAAAAATAGTGTCATAGAA----GTGCTAATCAATTTTCTATTCAT--------------------AATTTAGCTCCTGCCATATAACACTGAGCTCGAGGTCATTCTTAAACTGATG-CAAAC
droEre2 scaffold_4784:1299026-1299275 + TGCTGATCAAGTGGCTGGCCCAAACACCGGCTGAATACTTTGAGCGCCTTGTCCAGAACTGCTTGCATGTAGTCGTCCATATTATAAGTTTCAAAATGGGCTTGGTTGCCATTAGTCCCA---GCGCCGAGAGACGTGAAAGGGT-----ATTTAGG--------------TTTCACTATAGTGTCATACCT----GTGCCAAACAATTTTCTATTCTT--------------------AATTTAGTTCCTGCCATATAACACTGAGCTCGAGGTGATTCTTAAACTGATG-CAAAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
TGCTACACAAATAGCTGGCCCAAACGCCAGTGGATTACTTCGAGCGCCTGGTTAACATATTTCTGCACGTAGTGATTCACATCATCAGCTTCTAAATGGGTCTGATGGCCATCAGTCCAA---CGTTGGAGAGTTCCCAAAGAGT-----AAGGATTTGG----------------ATTTGATTCCA-TTACCGAC------CACCACCACTAAT--------G-----C-CATCATCGCTTTTAGCTGATGCCATACAATGCTGATTTGGATGTCATTCTGAAGGTAATG-AATGTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................TAACATATTTCTGCACGTAGTGATT............................................................................................................................................................................................................................25160.00600591000
....................................................TAACATATTTCTGCACGTAGTGAT.............................................................................................................................................................................................................................2416.006060000
...............................................................................................................................................................................................................................................................TACAATGCTGATTTGGATGTCATTC.................2543.00120120000
....................................................TAACATATTTCTGCACGTAGTGATTC...........................................................................................................................................................................................................................2613.003030000
....................................................................................TCAGCTTCTAAATGGGTCTGATGG.............................................................................................................................................................................................2432.678080000
.........................................................TATTTCTGCACGTAGTGATTCACATCA.....................................................................................................................................................................................................................2712.002020000
.............................................................................................................................................................................................TACCGAC------CACCACCACTAAT--------G-----C-CATCA.............................................................2722.004040000
.....................AAACGCCAGTGGATTACTTCGAGCGCCT........................................................................................................................................................................................................................................................2822.004400000
.....................................................AACATATTTCTGCACGTAGTGATT............................................................................................................................................................................................................................2412.002020000
....................................................................................TCAGCTTCTAAATGGGTCTGATGGCCA..........................................................................................................................................................................................2731.675050000
.....................................................................................CAGCTTCTAAATGGGTCTGATGG.............................................................................................................................................................................................2331.675041000
....................................................................................TCAGCTTCTAAATGGGTCTGATGGC............................................................................................................................................................................................2531.675041000
.............................................................................................................................................................................................TACCGAC------CACCACCACTAAT--------G-----C-CAT...............................................................2521.503030000
...................................................................................................................TCCAA---CGTTGGAGAGTTCCCAAAGAG.........................................................................................................................................................2631.334040000
...............................................................................................................................................................................................................................................................TACAATGCTGATTTGGATGTCAT...................2341.255050000
.............................................................................................................................................................................................TACCGAC------CACCACCACTAAT--------G-----C-CATCAT............................................................2821.002020000
....................................................................................................................................................................................................................................................................TGCTGATTTGGATGTCATTCTGAAGG...........2641.004400000
.....................................................AACATATTTCTGCACGTAGTGA..............................................................................................................................................................................................................................2211.001010000
....................................................TAACATATTTCTGCACGTAGTGA..............................................................................................................................................................................................................................2311.001010000
....................................................TAACATATTTCTGCACGTAGTGATTCACA........................................................................................................................................................................................................................2911.001010000
......................................................................................................................AA---CGTTGGAGAGTTCCCAAAGAG.........................................................................................................................................................2330.672020000
.....................................................................................CAGCTTCTAAATGGGTCTGATGGC............................................................................................................................................................................................2430.672020000
.............................................................................CACATCATCAGCTTCTAAATGGG.....................................................................................................................................................................................................2330.672020000
...............TGGCCCAAACGCCAGTGGATTACTT.................................................................................................................................................................................................................................................................2530.672020000
.........................GCCAGTGGATTACTTCGAGCGCCTG.......................................................................................................................................................................................................................................................2520.501010000
...............................................................................................................................................................................................................................................................TACAATGCTGATTTGGATGTCATT..................2440.502020000
.......................................................................................................................................CCCAAAGAGT-----AAGGATTTGG----------------.........................................................................................................................2020.501010000
..........................CCAGTGGATTACTTCGAGCGCC.........................................................................................................................................................................................................................................................2220.501100000
..........................CCAGTGGATTACTTCGAGCGCCTT.......................................................................................................................................................................................................................................................2420.501010000
...............................................................................................................................................................................................................................................................TACAATGCTGATTTGGATGTCATTCT................2640.502020000
..........................CCAGTGGATTACTTCGAGCGCCTG.......................................................................................................................................................................................................................................................2420.501010000
........................CGCCAGTGGATTACTTCGAGCGCCTGG......................................................................................................................................................................................................................................................2720.501010000
..........................CCAGTGGATTACTTCGAGCGCCT........................................................................................................................................................................................................................................................2320.501010000
....................CAAACGCCAGTGGATTACTTCGAGCGC..........................................................................................................................................................................................................................................................2720.501010000
...................................................................................................................................................................................................................................................TAGCTGATGCCATACAATGCTGATT.............................2540.502020000
.....................................................................................................................................TTCCCAAAGAGT-----AAGGATTTG..........................................................................................................................................2120.501010000
.............................................................................................................................................................................................TACCGAC------CACCACCACTAAT--------G-----C-CA................................................................2420.501010000
........................CGCCAGTGGATTACTTCGAGCGCCTG.......................................................................................................................................................................................................................................................2620.501010000
...........................................................................................................................................AAGAGT-----AAGGATTTGG----------------ATTTGATTC................................................................................................................2520.501100000
..............................TGGATTACTTCGAGCGCCTG.......................................................................................................................................................................................................................................................2020.501010000
.............................................................................................................................................................................................................................................CGCTTTTAGCTGATGCCATACAATG...................................2520.501010000
..........................CCAGTGGATTACTTCGAGCGCCTGGT.....................................................................................................................................................................................................................................................2620.501010000
.............................................................................................................................................................................................TACCGAC------CACCACCACTAAT--------G-----C-CATCATC...........................................................2920.501010000
.........................GCCAGTGGATTACTTCGAGCGCCT........................................................................................................................................................................................................................................................2420.501100000
...............................................................................................................TCAGTCCAA---CGTTGGAGAGA...................................................................................................................................................................2030.331010000
....................................................................................TCAGCTTCTAAATGGGTCTGATGGAA...........................................................................................................................................................................................2630.331010000
..................................................................................................................GTCCAA---CGTTGGAGAGTTCCCAAAGAG.........................................................................................................................................................2730.331010000
...........................................................................................CTAAATGGGTCTGATGGC............................................................................................................................................................................................1830.331010000
.........................................................................................................TGGCCATCAGTCCAA---CGTTGGAGA.....................................................................................................................................................................2430.331100000
....................................................................................................................CCAA---CGTTGGAGAGTTCCCAAAGAG.........................................................................................................................................................2530.331010000
...................................................................................................................................................................................TGATTCCA-TTACCGAC------CACCACCA.......................................................................................2430.331010000
....................................................................................TCAGCTTCTAAATGGGTCTGATGGCCAT.........................................................................................................................................................................................2830.331010000
............................................................................................TAAATGGGTCTGATGGCCATCAGTCC...................................................................................................................................................................................2630.331010000
........................CGCCAGTGGATTACTTCGAG.............................................................................................................................................................................................................................................................2030.331010000
................................................................................................TGGGTCTGATGGCCATCAGTC....................................................................................................................................................................................2130.331010000
....................CAAACGCCAGTGGATTACTTCGA..............................................................................................................................................................................................................................................................2330.331010000
............................................................................TCACATCATCAGCTTCTAAATGGGTC...................................................................................................................................................................................................2630.331010000
...................................TACTTCGAGCGCCTGGTTA...................................................................................................................................................................................................................................................1930.331010000
...................................................................................ATCAGCTTCTAAATGGGTCTGATG..............................................................................................................................................................................................2430.331010000
.............................................................................................................CATCAGTCCAA---CGTTGGAGAGTT..................................................................................................................................................................2330.331010000
.....................AAACGCCAGTGGATTACTTCGAGCGA..........................................................................................................................................................................................................................................................2630.331010000
..........................CCAGTGGATTACTTCGAGCG...........................................................................................................................................................................................................................................................2030.331010000
.............................................................................CACATCATCAGCTTCTAAATGGGTC...................................................................................................................................................................................................2530.331010000
.........................GCCAGTGGATTACTTCGAGC............................................................................................................................................................................................................................................................2030.331010000
............................................................................................TAAATGGGTCTGATGGCCATCAGTC....................................................................................................................................................................................2530.331010000
....................CAAACGCCAGTGGATTACTTCGAGCG...........................................................................................................................................................................................................................................................2630.331010000
...............................................................................................................TCAGTCCAA---CGTTGGAGAGTTCCCA..............................................................................................................................................................2530.331010000
...............................................................................................................TCAGTCCAA---CGTTGGAGAGTTCCCAA.............................................................................................................................................................2630.331010000
..........................................................................................TCTAAATGGGTCTGATGGCCATCAGTC....................................................................................................................................................................................2730.331010000
......................................................................................................TGATGGCCATCAGTCCAA---CGTTGG........................................................................................................................................................................2430.331010000
.................................................................................TCATCAGCTTCTAAATGGGTCT..................................................................................................................................................................................................2230.331010000
.............................................................................................................................................................................................................................................................CATACAATGCTGATTTGGATGTCATTC.................2740.251010000
..................................................................................................................................................................................................................................................TTAGCTGATGCCATACAATGCTGATT.............................2640.251010000
...........................................................................................................................................................................................................................................................................TTGGATGTCATTCTGAAGG...........1940.251010000
...................................................................................................................................................................................................................................................................ATGCTGATTTGGATGTCATTCTGAAGG...........2740.251100000
....................................................................................................................................................................................................................................................................TGCTGATTTGGATGTCATTCTGAAG............2540.251010000
..................................................................................................................................................................................................................................................TTAGCTGATGCCATACAATGCTGATTT............................2740.251010000
...............................................................................................................................................................................................................................................................TACAATGCTGATTTGGATG.......................1940.251010000
...................................................................................................................TCCAA---CGTTGGAGAGTTCCCAG.............................................................................................................................................................2240.251010000
...........................................................................................................................................................................................................................................................................TTGGATGTCATTCTGAAGGTAATG-AA...2640.251010000
...............................................................................................................................................................................................................................................................TACAATGCTGATTTGGATGTCATTCTGA..............2840.251010000
................................................................................................................................................................................................................................................................ACAATGCTGATTTGGATGTCATTCTGA..............2740.251010000
.................................................................................................................................................................................................................................................TTTAGCTGATGCCATACAATGCTGA...............................2540.251010000
..................................................................................................................................................................................................................................................TTAGCTGATGCCATACAATGCTGAT..............................2540.251010000
...............................................................................................................................................................................................................................................................TACAATGCTGATTTGGATGTCA....................2240.251010000
.....................................................................................................................................................................................................................................................................GCTGATTTGGATGTCATTCTGAAGG...........2540.251010000
...............................................................................................................................................................................................................................................................TACAATGCTGATTTGGATGTCATTCTG...............2740.251010000
.......................................................................................................................................................................................................................................................................TGATTTGGATGTCATTCTGAAGGTAAA.......2740.251010000
dp5
TGCTACACAAATGGCTGGCCCAAACGCCAGTGGATTACTTCGAGCGCCTGGTTAACATATTTCTGCACGTGGTGATTCACATCATCAGCTTCAAAATGGGTCTGATGGCCACCAGTCCAA---CGTTGGAGAGTTCCCAAGAGGT-----GAGGATTTGG----------------ATTTGATTTCA-TTACCGAC------CACCACCACTAAC--------G-----C-CATCATCCCTTTTAGCTGATGCCATACAATGCTGATTTGGATGTCATTCTGAAGGTAATG-AATGTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................TAACATATTTCTGCACGTGGTGATT............................................................................................................................................................................................................................252155.0031002641403002900
....................................................TAACATATTTCTGCACGTGGTGAT.............................................................................................................................................................................................................................24220.004003330100300
....................................................TAACATATTTCTGCACGTGGTGA..............................................................................................................................................................................................................................23214.502902500100300
....................................................TAACATATTTCTGCACGTGGTG...............................................................................................................................................................................................................................22211.502302100000200
.....................................................AACATATTTCTGCACGTGGTGATT............................................................................................................................................................................................................................2428.501701700000000
TGCTACACAAATGGCTGGCCCAAACG...............................................................................................................................................................................................................................................................................2628.001601600000000
....................................................TAACATATTTCTGCACGTGGT................................................................................................................................................................................................................................2125.50110910100000
...................................................................................................................TCCAA---CGTTGGAGAGTTCCCAAGAGC.........................................................................................................................................................2614.0040400000000
TGCTACACAAATGGCTGGCCCAAAC................................................................................................................................................................................................................................................................................2523.5070610000000
TGCTACACAAATGGCTGGCCCAAACGC..............................................................................................................................................................................................................................................................................2723.5070700000000
...................................................TTAACATATTTCTGCACGTGGTGATT............................................................................................................................................................................................................................2623.0060600000000
...............................................................................................................................................................................................................................................................TACAATGCTGATTTGGATGTCATT..................2412.0020200000000
....................................................TAACATATTTCTGCACGTGGTGATTC...........................................................................................................................................................................................................................2622.0040310000000
......................................................................................................................AA---CGTTGGAGAGTTCCCAAGAGC.........................................................................................................................................................2312.0020200000000
...............................................................................................................................................................................................................................................................TACAATGCTGATTTGGATGTCATTC.................2512.0020200000000
........................................................ATATTTCTGCACGTGGTGATT............................................................................................................................................................................................................................2122.0040400000000
....................................................................................TCAGCTTCAAAATGGGTCTGATGGC............................................................................................................................................................................................2512.0020200000000
...............................................................................................................................................................................................................................................................TACAATGCTGATTTGGATGTCATTCTG...............2712.0020200000000
TGCTACACAAATGGCTGGCCCAAA.................................................................................................................................................................................................................................................................................2422.0040310000000
....................CAAACGCCAGTGGATTACTTCGAGCGC..........................................................................................................................................................................................................................................................2721.5030000000300
..............................TGGATTACTTCGAGCGCCTGGT.....................................................................................................................................................................................................................................................2221.0020200000000
...................................................................................ATCAGCTTCAAAATGGGTCTGATGGCCA..........................................................................................................................................................................................2811.0010100000000
.............................................................................................................CACCAGTCCAA---CGTTGGAGAGT...................................................................................................................................................................2211.0010010000000
...............TGGCCCAAACGCCAGTGGATTAA...................................................................................................................................................................................................................................................................2311.0010100000000
.......................................................................................................GATGGCCACCAGTCCAA---CGTTGGAGAG....................................................................................................................................................................2711.0010100000000
....................................................................................................................................................................................................................................................................TGCTGATTTGGATGTCATTCTGAAGG...........2611.0010100000000
.................................................................................................................................................................................................................................................TTTAGCTGATGCCATACAATGC..................................2211.0010100000000
....................................................................................TCAGCTTCAAAATGGGTCTGATG..............................................................................................................................................................................................2311.0010100000000
....................................................TAACATATTTCTGCACGTGGTGATTA...........................................................................................................................................................................................................................2621.0020100000100
....................................................TAACATATTTCTGCACGTGGTGAC.............................................................................................................................................................................................................................2421.0020110000000
...TACACAAATGGCTGGCCCAAACG...............................................................................................................................................................................................................................................................................2321.0020200000000
....................................................................................TCAGCTTCAAAATGGGTCTGATGGCC...........................................................................................................................................................................................2611.0010100000000
............................................................TTCTGCACGTGGTGATTCACATC......................................................................................................................................................................................................................2321.0020200000000
....................................................TAACATATTTCTGCACGTGGTGATTT...........................................................................................................................................................................................................................2621.0020200000000
...............TGGCCCAAACGCCAGTGGATTACTTCG...............................................................................................................................................................................................................................................................2711.0010100000000
....................................................TAACATATTTCTGCACGTGGTGATAA...........................................................................................................................................................................................................................2621.0020200000000
................................................................................................................................................................................................................................................................ACAATGCTGATTTGGATGTCATTCTG...............2611.0010100000000
....................................................TAACATATTTCTGCACGTGG.................................................................................................................................................................................................................................2031.0030300000000
.....................................................AACATATTTCTGCACGTGGTGA..............................................................................................................................................................................................................................2221.0020200000000
...............................................................................................................................................................................................................................................................TACAATGCTGATTTGGATGTCATTCTGA..............2811.0010100000000
...................................................................................................................................................................................................................TAAC--------G-----C-CATCATCCCTTTTAGCTGATG.............................................2711.0010100000000
....................................................................................TCAGCTTCAAAATGGGTCTGATGG.............................................................................................................................................................................................2411.0010100000000
.........................................................TATTTCTGCACGTGGTGATT............................................................................................................................................................................................................................2020.5010100000000
..CTACACAAATGGCTGGCCCAAAA................................................................................................................................................................................................................................................................................2320.5010100000000
....................................ACTTCGAGCGCCTGGTTAACA................................................................................................................................................................................................................................................2120.5010000010000
.GCTACACAAATGGCTGGCCCAAAC................................................................................................................................................................................................................................................................................2420.5010100000000
..............................TGGATTACTTCGAGCGCCTG.......................................................................................................................................................................................................................................................2020.5010100000000
.....................................................AACATATTTCTGCACGTGGTGAT.............................................................................................................................................................................................................................2320.5010100000000
...................................................TTAACATATTTCTGCACGTGGTG...............................................................................................................................................................................................................................2320.5010000000100
...TACACAAATGGCTGGCCCAAACGC..............................................................................................................................................................................................................................................................................2420.5010000100000
......................................................ACATATTTCTGCACGTGGTGAA.............................................................................................................................................................................................................................2220.5010100000000
................................................................................................................CAGTCCAA---CGTTGGAGAGTTCCCA..............................................................................................................................................................2420.5010100000000
..........................CCAGTGGATTACTTCGAGCGCC.........................................................................................................................................................................................................................................................2220.5010000100000
........................CGCCAGTGGATTACTTCGAGCGCC.........................................................................................................................................................................................................................................................2420.5010100000000
...TACACAAATGGCTGGCCCAAACGCC.............................................................................................................................................................................................................................................................................2520.5010100000000
...............................GGATTACTTCGAGCGCCTGGT.....................................................................................................................................................................................................................................................2120.5010100000000
...........................................................TTTCTGCACGTGGTGATTCACATC......................................................................................................................................................................................................................2420.5010100000000
..............................TGGATTACTTCGAGCGCCT........................................................................................................................................................................................................................................................1920.5010100000000
...TACACAAATGGCTGGCCCAAAC................................................................................................................................................................................................................................................................................2220.5010100000000
............................................................TTCTGCACGTGGTGATTCACATCATC...................................................................................................................................................................................................................2620.5010100000000
....................................................TAACATATTTCTGCACGTGGTGATTGG..........................................................................................................................................................................................................................2720.5010100000000
...TACACAAATGGCTGGCCCAA..................................................................................................................................................................................................................................................................................2020.5010100000000
....................................................TAACATATTTCTGCACGTGGTGATC............................................................................................................................................................................................................................2520.5010010000000
.........................................................TATTTCTGCACGTGGTGATTCACA........................................................................................................................................................................................................................2420.5010100000000
.GCTACACAAATGGCTGGCCCAAACGC..............................................................................................................................................................................................................................................................................2620.5010100000000
.....................................................AACATATTTCTGCACGTGGTG...............................................................................................................................................................................................................................2120.5010100000000
.....................................................AACATATTTCTGCACGTGGTGATTCA..........................................................................................................................................................................................................................2620.5010100000000
............................AGTGGATTACTTCGAGCGCCTGG......................................................................................................................................................................................................................................................2320.5010100000000
....................................................TAACATATTTCTGCACGTGGTGATA............................................................................................................................................................................................................................2520.5010100000000
....................................................TAACATATTTCTGCACGTGGTGAAA............................................................................................................................................................................................................................2520.5010100000000
.GCTACACAAATGGCTGGCCCAAACG...............................................................................................................................................................................................................................................................................2520.5010100000000
..........................................................ATTTCTGCACGTGGTGATT............................................................................................................................................................................................................................1920.5010100000000
...................................................TTAACATATTTCTGCACGTGGTGAT.............................................................................................................................................................................................................................2520.5010100000000
............................................................TTCTGCACGTGGTGATTCACATCA.....................................................................................................................................................................................................................2420.5010100000000
..........................................................ATTTCTGCACGTGGTGAT.............................................................................................................................................................................................................................1820.5010000000100
....................................................TAACATATTTCTGCACGTGGTGATTCAA.........................................................................................................................................................................................................................2820.5010100000000
.....................................................AACATATTTCTGCACGTGGTGATTC...........................................................................................................................................................................................................................2520.5010100000000
....................................................TAACATATTTCTGCACGTGGTGATTCA..........................................................................................................................................................................................................................2720.5010100000000
................................................TGGTTAACATATTTCTGCACGTGG.................................................................................................................................................................................................................................2430.3310000000100
.............................................GCCTGGTTAACATATTTCTGCACGTGG.................................................................................................................................................................................................................................2730.3310100000000
................................................TGGTTAACATATTTCTGCACGTG..................................................................................................................................................................................................................................2330.3310100000000
droWil2
TCCTGAAGAAATGGTGGAGTCAAACGCCCATGGAATACTATGAGCATATGGTCAATAATTATTTGCATGTGGTCGTTCATATAGTTAGTTTTAAAATGGGTTTAAGTGTCCTAAATCATCAAGCATTGGAAACACAACAGAGGGT-----AATCTAACGT-----------GCTAAATTTAATTTCATATTT----GTTTCAACCTGTTTTTTATTTCT---------------CCTGATTATCAGTTGTTGCCCTACAATTTGGAATTGGAGGTGATCTTGAGACTGCTT-CAATASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................................................................................................................................................................................ACAATTTGGAATTGGAGGT......................1911.00100100
..............................................................................ATATAGTTAGTTTTAAAATGGGT....................................................................................................................................................................................................2311.00100010
............................................................ATTTGCATGTGGTCGTTCAT.........................................................................................................................................................................................................................2011.00100010
............................................................................................AAAATGGGTTTAAGTGTC...........................................................................................................................................................................................1811.00100010
................................................................GCATGTGGTCGTTCATATAGTTAGT................................................................................................................................................................................................................2511.00100010
.......................................................................................................................................................................................................................................................TGTTGCCCTACAATTTGGAATTGGAG........................2611.00100100
droVir3
TGCTGGAGAAATGGTGGGGTCAGACGCCGTCCGATTATTTCGAACAAATGGTCAACAATTTTCTGCACGTGACGATGCACATCATCAGCTTTAAGCTGGGCATCGAGGTAATCAATCAAA---ATGAGCCGCGTCAGAAAAAGGT-----AATCGTACAC----AACCATTTTCTTATCCT-GCCCCGTCAT----TTATTAATCTAAGCCTA--------------------TCGCGCCTATTAGCTGCTACCCTACAATAGAGATCTGGAAGCGGTGCTGCGACTGCTG-GAGAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........TGGTGGGGTCAGACGCCGTC..........................................................................................................................................................................................................................................................................2013.003000000010000000000000000000000000000000000000000000000000000002
...................................................TCAACAATTTTCTGCACGTGACGATG............................................................................................................................................................................................................................2611.001000000000000000000000000000000000000001000000000000000000000000
...................................................................................................................................................................................................................................................................ATAGAGATCTGGAAGCGGT...................1911.001001000000000000000000000000000000000000000000000000000000000000
........................CGCCGTCCGATTATTTCGA..............................................................................................................................................................................................................................................................1911.001000000000000000000000000100000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................GTGCTGCGACTGCTG-GAGA.1911.001001000000000000000000000000000000000000000000000000000000000000
......................................................ACAATTTTCTGCACGTGAC................................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
..................................................................................................................ATCAAA---ATGAGCCGCGTCAGA...............................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.................GGTCAGACGCCGTCCGATT.....................................................................................................................................................................................................................................................................1911.001000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................ATCAATCAAA---ATGAGCCGC.....................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
...........TGGTGGGGTCAGACGCCGTCCGATT.....................................................................................................................................................................................................................................................................2511.001000000000000000000000000000001000000000000000000000000000000000
............................................................TTCTGCACGTGACGATGCAC.........................................................................................................................................................................................................................2011.001000000000000000000000000000000010000000000000000000000000000000
...........................................................TTTCTGCACGTGACGATGCACATCA.....................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
....................................................CAACAATTTTCTGCACGTGACGAT.............................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................AAGCTGGGCATCGAGGTAATCAATCAA..................................................................................................................................................................................2711.001000000000000000000000000000000000001000000000000000000000000000
.............................................................................................................AATCAATCAAA---ATGAGCCGCGTCAGA...............................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000001000
droMoj3
TGTTAGAAAAATGGTGGGCTCAAACGCCGTCTGAATACTTTGAGCAAATGGTCAATAACTTTTTGCATGTGGCGATGCACATCATCAGCTTTAAAATGGGCATTGAGGTGATCAATCACA---ATGAACCGCGTCAGAAGAAGGT-----AATCGTATGC----ATCTATTTTCCAATACT-TTTCACCTAC----TTACTAATCAATGCCAAATACGT--------------------ATCTTAGCTGTTGCCCTACAGCAGTGATCTGGAGGCTGTCCTACGATTTTTGACAAATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................................TTTAAAATGGGCATTGAGGTG...........................................................................................................................................................................................2111.001100000
..............................................................................................................ATCAATCACA---ATGAACCGC.....................................................................................................................................................................1911.001100000
............................GTCTGAATACTTTGAGCAAAT........................................................................................................................................................................................................................................................2111.001000001
...............................................................................CATCATCAGCTTTAAAAT........................................................................................................................................................................................................1811.001000100
droGri2
TGCTGGAGAAATGGTGGGGTCAAACACCATCGGAGTATTTTGAGCATATGGTGAACAGTTTTCTACATGTTGCCATGCACATTATTAGCTTCAAGATGGGCATCGAGGTGATCAATACCA---ATGAGCCGCGCCAGAAAAGGGT-----AGGCATA--------------TCGCAATCAA--TCTC-TGACCAAG------TATAATTCATAATGCTT--------------------CTCTTAGGTTTTGCCCTACAACAGCGATCTGGAGACTGTGCTGCGTCTGTTG-GCGCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...................................................................................ATTAGCTTCAAGATGGGCA...................................................................................................................................................................................................1911.00110
..............................................................................................GATGGGCATCGAGGTGAT.........................................................................................................................................................................................1811.00101
............................................................................................AAGATGGGCATCGAGGTGATCA.......................................................................................................................................................................................2211.00101
......................................................................................................................................................................................................................................................................GCGATCTGGAGACTGTGCTGC..............2111.00110
.............................................................................................................................................................................................................................................................CCTACAACAGCGATCTGGAGA.......................2111.00101
........................................................................................................................................................................................................................................................................GATCTGGAGACTGTGCTG...............1811.00110
droAna3
TTCTCATGAGATGGTTGGCCCAAACGCCAGCGGATTACTTTGAGCATATTGTCCAGAACTTCTTACATGTAGTTATTCATATTATAAGTTTTAAAATGGGATTGGCGGCCGTAAATCCCG---CTGCCGAGAGACATCAAAGGGT-----AGGATTCTT--------------TCCATTTT--ACTC---ATAAAA------T---ATTTATAATT-------GTT---AT-TTT-ACATTTTTAGCTACTGCCATACAACTCTGAACTGGAGACTATCCTGAAAATGATG-CAGACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................AACGCCAGCGGATTACTTTGAGC............................................................................................................................................................................................................................................................2312.002110000
................................................................................................................................................................................................................................................................ACAACTCTGAACTGGAGACC.....................2011.001010000
.........................GCCAGCGGATTACTTTGAGC............................................................................................................................................................................................................................................................2011.001010000
..............................CGGATTACTTTGAGCATATTGTCC...................................................................................................................................................................................................................................................2411.001100000
droBip1
TTCTTATGAAGTGGTTGGCCCAAACGCCGGCGGATTACTTCGAGCATATTGTCCAAAACTTCTTGCATGTAGTCATTCATATTATAAGTTTTAAAATGGGTTTGGCGGCCATCAATTCCT---CTGCCGAGAGACAACAAAGGGT-----AAGGCTTTCA---------------AATCTT--TCGC---TTTAAA------T----------ATTTATAATTACTTTGTTTTCACATTCTTCTAGCTGCTACCATACAACAAGGAACTGGAGACAATCCTGAAAATGATG-CAGACSizeHit CountTotal NormTotal
No Reads
droKik1
TGCTGATGAAGTGGCTGGCCCAAACGCCAACGGAGTACTTTGAGCATTTGGTACAAAACTTTCTGCATGTCGTAGTCCACATAATAAGCTTCAAAATGGGCCTGGCTGTGGTCAATCCCT---CCGCCGAGAGACGTCAAAGGGT-----ATTATG---------------TTTGAATATATATCTTTGTGA----AA----GTGAATAATGTTTCCGT--------------------TCTGCAGCTGCTGCCCTACAGCTCCGAGCTGGAGGTGATCCTCAAGCTGATC-TCAACSizeHit CountTotal NormTotal
No Reads
droFic1
TGCTGATTAAGTGGCTAGCTCTAACGCCAACGGATTACTTTGAACATCTTGTCCAAAACTTTTTGCACGTGGTAGTGCACATTATTAGCTTTAAAATGGGCTTGGCAGTGGTCAATCCCA---CTGCCGAAAGGCGTCAAAGAGT-----AAGTAGT--------------TTGAAT-----GGGAATAATT----TTGTCTATGATAGCTCA-A--------A-----C-TTTTAT--ATTGTAGCTGCTGCCATATAACACAGAGCTAGAGGTGATCCTGAAGTTGATG-CAGACSizeHit CountTotal NormTotal
No Reads
droEle1
TGCTAATCAAGTGGCTGGCCCAAACGCCAGCGGAATACTTTGAGCATCTTGTCCAAAACTTTTTGCACGTCGTGGTGCACATTATAAGCTTCAAAATGGGATTGGCCGCCGTCAGTCCCA---GTGCCGAAAGACGCCAGAGGGC-----AAGTGTTACT-----------CTTGGATTTAATTTTCAATTT----GTGCTGATCCT-------------------------TTT---CCATCCAGCTGCTGCCATATAACACCGAACTGGAGGTGATCCTAAAGTTGATG-CAGACSizeHit CountTotal NormTotal
No Reads
droRho1
TACTAATAAAGTGGCTGGCTCAAACGCCATCGGAATACTTTGAGCATCTTGTCCAGAACTTTCTGCATGTCGTGGTGCACATTATAAGCTTCAAAATGGGTTTGGCAGCCGTCAATCCCA---GTGCCGAAAGACGTCAGAGGGC-----AAGTATTTCTGCAGG------TCTTAATTTGATCTCAAATTT----GTTCTAATCATAGTTCCTCTAAC--------------------ATTTCAGCTGCTGCCATACAACACTGAGTTGGAGGTGATCCTAAAGTTGATG-CAGACSizeHit CountTotal NormTotal
No Reads
droBia1
TGCTGATCAAGTGGCTGGCCCAAACGCCGGCTGAGTACTTTGAGCATCTTGTCCAGAACTTCTTGCACGTGGTTGTGCACATAATTAGCTTTAAAATGGGCTTGACTGCCGTCAGTCCCA---GCGCCGAAATTCGAAATTCGGTAGGGTATCCGTA-------------------ATCAAATATGA----A----ATGTATGCTAATTTCCTACTGCC--------------------GTTTCAGCTGCTGCCATACAACACCGAGCTGGAGGTGATCCTGAAGCTGATG-CATACSizeHit CountTotal NormTotal
No Reads
droTak1
TGCTGATGAAGTGGCTCTCGCAAACGCCGGCTGAATACTTTGAGCATCTTGTCCAGAACTTCTTGCACGTAGTTGTGCACATTATAAGCTTCAAAATGGGCTTGGCGGCGGTCAATCCGA---GCGCCGAAAGGCGTCATAGGGT-----ATATAAT--------------TTACAAAACAATATGA----A----GTATAAGCTAATTCCCTGCTCAT--------------------CCTACAGCTACTGCCATACAACAAGGAACTGGAGGTGATCCTGAAGCTGATG-CAAACSizeHit CountTotal NormTotal
No Reads
droEug1
TGTTGATAAAGTGGCTGTCCCAAACAACAGCTGAGTACTTTGAGCATCTTGTCCAGAACTTCTTGCACGTTGTTATCCATATAATTAGTTTCAATATGGGCTTGACTGCCGTCAGTCCCA---GTGCCGAGAGGCGTCACAGGGC-----AAGTAAT--------------TTTCAATTTAATTTTG-ACCT----GTGCTAATCTAGTTTCCACCT----------------TTGTATATTCCAGTTGCTGCCACATAACACTGAGTTAGAGGTGATCCTAAAGCTTTTG-CAAACSizeHit CountTotal NormTotal
No Reads
dm3
TGCTGAACAAGTGGTTGGCCCAAACACCGGCTGAATACTTCGAGCATCTTGTCCAGAACTTCTTGCATGTTGTCATCCATATTATAAGTTTCAAAATGGGCTTGGCTGCCGCTAGTCCCA---GCGCCGAAAGACGTCAACAGGT-----ATTTAGA--------------TTTCAATATAGGGCCATACCA----GTGTCAATTAATTCTCTATTCAT--------------------AATCTAGCTGCTGCCATATAACACTGAACTCGAGATCATTCTAAAGCTGATG-AAAACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................................................TTTCAAAATGGGCTTGGCTGCCGC.........................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................TAGTCCCA---GCGCCGAAAGACGT................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................ACACTGAACTCGAGATCATT..................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................AGTCCCA---GCGCCGAAAGA...................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................ATCTTGTCCAGAACTTCTTGC.......................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................TGCCGCTAGTCCCA---GCGCCGAAAGACGTC...............................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................ATTCAT--------------------AATCTAGCTGCTGCC...........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................ACTGAACTCGAGATCATTCTA...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................CCAGAACTTCTTGCATGTTGTCATC............................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................AAGTTTCAAAATGGGCTTGGC...............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................CATATAACACTGAACTCGAGATC.....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........................................................................ATCCATATTATAAGTTTCAAAATGGGC....................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................GCTAGTCCCA---GCGCCGAAAGA...................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TGGCTGCCGCTAGTCCCA---..............................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................CGAAAGACGTCAACAGGT-----...................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AACACCGGCTGAATACTTCGAGCA...........................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TATAACACTGAACTCGAGAT......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................A---GCGCCGAAAGACGTCAAC............................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................GCTGCTGCCATATAACACTGAA..............................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................AGTTTCAAAATGGGCTTGGCT..............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................TTTCAAAATGGGCTTGGCTGCCG..........................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CACCGGCTGAATACTTCGAGC............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................ATACTTCGAGCATCTTGTCCAGAAC..............................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................ACTCGAGATCATTCTAAAGC...........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................TGAATACTTCGAGCATCTTGTC....................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................GGCTGAATACTTCGAGCATCTT.......................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...............................................................................................................................................................................................................................................................TATAACACTGAACTCGAGATC.....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...............................................................TGCATGTTGTCATCCATATTATA...................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................CTTCGAGCATCTTGTCCAGAACT.............................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
................................................................GCATGTTGTCATCCATATTATA...................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GAACAAGTGGTTGGCCCAAACAA..............................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................................................................................................................................................TGCTGCCATATAACACTGAACTCGAGA.......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................TACTTCGAGCATCTTGTCCAGAACT.............................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................CTTCGAGCATCTTGTCCAGAACTTC...........................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................AACACTGAACTCGAGATCATTCT................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................TTGGCTGCCGCTAGTCCC..................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGCTGAACAAGTGGTTGGCCCAAACACC.............................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................GGGCTTGGCTGCCGCTAGTC....................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................TTGTCCAGAACTTCTTGCATGTTGT................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........AAGTGGTTGGCCCAAACACCGGCTGAA......................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGCTGAACAAGTGGTTGGCAT....................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
...................................TACTTCGAGCATCTTGTCCAGAACTTC...........................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CCCAAACACCGGCTGAATACTTCGAGC............................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................TACTTCGAGCATCTTGTCCAGAA...............................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................AGTCCCA---GCGCCGAAAGACGTCAAC............................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TGCATGTTGTCATCCATAAC......................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................GTCCCA---GCGCCGAAAGACGTCAACA...........................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................................................................................................ATACCA----GTGTCAATTAATTCC......................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
droSim2
TGCTGAGCAAGTGGTTGGCCCAAACACCGACTGAATACTTCGAGCATCTTGTCCAGAACTTCTTGCATGTTGTCGTCCATATTATAAGTTTCAAAATGGGCTTGGCTGCCGCTAGTCCCA---GAGCCGAAAGGCGTCAACAGGT-----ATTTAGA--------------TTTCAATATAGGGCCACACCA----GTGTCAATTAATTCTCTATTCAT--------------------AATCTAGCTGCTGCCATATAACACTGAACTCGAGGTGATTCTTACGCTGATG-AAAACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................................................TATTATAAGTTTCAAAATGGGCTT..................................................................................................................................................................................................2412.00220000000000000000
.......................................................................................................................................................................................................................................................TGCTGCCATATAACACTGAACTCGAGG.......................2712.00200000020000000000
.................................AATACTTCGAGCATCTTGTCCA..................................................................................................................................................................................................................................................2211.00100000001000000000
....GAGCAAGTGGTTGGCCCAAACACCGAC..........................................................................................................................................................................................................................................................................2711.00100000000000100000
..................................................GTCCAGAACTTCTTGCATGTT..................................................................................................................................................................................................................................2111.00101000000000000000
........................CACCGACTGAATACTTCGAGCATCTTG......................................................................................................................................................................................................................................................2711.00100010000000000000
...............................................................................................................................................................................................................................................................TATAACACTGAACTCGAGGTGATTCT................2611.00100000010000000000
droSec2
TGCTGAGCAAGTGGTTGGCCCAAACACCGACTGAATACTTCGAGCATCTTGTCCAGAACTTCTTGCATGTTGTCGTCCATATTATAAGTTTCAAAATGGGCTTGGCTGCCGCTAGTCCCA---GAGCCGAAAGGCGTCAACAGGT-----ATTTAGA--------------TTTCAATATAGGGCCACACCA----GTGTCAATTAATTCTCTATTCAT--------------------AATCTAGCTGCTGCCATATAACACTGAACTCGAGGTGATTCTTACGCTGATG-AAAACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................ATCTTGTCCAGAACTTCTTGCATGTTGT................................................................................................................................................................................................................................2811.0010010
...TGAGCAAGTGGTTGGCCCA...................................................................................................................................................................................................................................................................................1911.0011000
...................................................................................................................................................................................................................................................................................GATTCTTACGCTGATG-AA...1811.0011000
droYak3
TGCTGATCAAGTGGCTGGCCCAAACTCCGGCTGAATACTTTGAGCGCCTTGTCCAGAACTGCTTAAATGTTGTCGTCCATATTATTAGTTTCAAAATGGGCTTGGCTGCCATTAGTCCCA---GCGTGGAAAGACGTCAAAGGGT-----AATTACG--------------TTTAAAAATAGTGTCATAGAA----GTGCTAATCAATTTTCTATTCAT--------------------AATTTAGCTCCTGCCATATAACACTGAGCTCGAGGTCATTCTTAAACTGATG-CAAACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................................................................................................................CTGCCATATAACACTGAGCTCGAG........................2411.00101000000000
....................................ACTTTGAGCGCCTTGTCCAGAACTGCT..........................................................................................................................................................................................................................................2711.00100000010000
droEre2
TGCTGATCAAGTGGCTGGCCCAAACACCGGCTGAATACTTTGAGCGCCTTGTCCAGAACTGCTTGCATGTAGTCGTCCATATTATAAGTTTCAAAATGGGCTTGGTTGCCATTAGTCCCA---GCGCCGAGAGACGTGAAAGGGT-----ATTTAGG--------------TTTCACTATAGTGTCATACCT----GTGCCAAACAATTTTCTATTCTT--------------------AATTTAGTTCCTGCCATATAACACTGAGCTCGAGGTGATTCTTAAACTGATG-CAAACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................CTGCTTGCATGTAGTCGTCCA..........................................................................................................................................................................................................................2111.0011000000
.....................AAACACCGGCTGAATACTTTGAGCGC..........................................................................................................................................................................................................................................................2611.0010000100
.......................................................................................GTTTCAAAATGGGCTTGGTT..............................................................................................................................................................................................2011.0010000100
..........................................................................................................TGCCATTAGTCCCA---GCGCCGAGAGAC..................................................................................................................................................................2611.0011000000
..............................................................................................................ATTAGTCCCA---GCGCCGAGA.....................................................................................................................................................................1911.0010000100
................................GAATACTTTGAGCGCCTTGTCCAGAAC..............................................................................................................................................................................................................................................2711.0010000100
...............................TGAATACTTTGAGCGCCTTGTCCAGAAC..............................................................................................................................................................................................................................................2811.0010000100
.....................................................................................................................................................................................................................................................GTTCCTGCCATATAACACTGAGCTCGA.........................2711.0010000100

Generated: 06/08/2015 at 03:56 PM