ID:

dpe_1240

 Coordinate:

scaffold_247:12456-12606 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.6 -11.5 -11.3

Flybase annnotation

CDS [Dper\GL11741-cds]; exon [dper_GLEANR_11890:2]; intron [Dper\GL11741-in]

Repeatable elements

NameClassFamilyStrand
BEL-16_DWil-I-intLTRPao+
mature
  1. dpe_1240  scaffold_247:12515-12540 -
  2. scaffold_28:1086171-1086196 +
  3. scaffold_186:32241-32266 +
  4. scaffold_325:4069-4094 +
  5. scaffold_656:3491-3516 +
  6. scaffold_7903:814-839 -
star
  1. dpe_1240  scaffold_247:12561-12587 -
  2. scaffold_173:1792-1818 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TATGCGTGTGCAGTTGCGGGCTTTAGGAGTACGTGTGAGTACAGTACAGCTATGTTTTGGACACAAGCAAGAACAACAAAGCTATGCGCGTAAGAGTAGTTACTTAGGCGGTGCAATACAATCATGTGCATATGAATAGGGCAGTTGTAATATACACGAACATTGAACTAAAACTACGCGGCAAATTTCTCAACATACCAGACCCCCTGAACGGCTGTTCAGGACAAGGGAAGCACAGCAAGTTTGGAAAC
*********************************************************************.............(((((((((....(((..((((.....))))...)))....)))))))))..........************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V042
embryo
 M021
embryo
 V111
male body
....................................................................................................................TACAATCATGTGCATATGAATAGGGC............................................................................................................. 26 0 6 4.83 29 21 8 0 0
....................................................................................................................TACAATCATGTGCATATGAATAGGG.............................................................................................................. 25 0 6 2.67 16 16 0 0 0
....................................................................................................................TACAATCATGTGCATATGAATAGG............................................................................................................... 24 0 6 1.33 8 8 0 0 0
............................................TACAGCTATGTTTTGGACACAAGCA...................................................................................................................................................................................... 25 0 16 1.19 19 19 0 0 0
............................................TACAGCTATGTTTTGGACACAAGCAA..................................................................................................................................................................................... 26 0 16 0.94 15 14 1 0 0
............................................TACAGCTATGTTTTGGACACAAG........................................................................................................................................................................................ 23 0 16 0.88 14 12 0 2 0
.....................................................................................................................ACAATCATGTGCATATGAATAGGG.............................................................................................................. 24 0 6 0.83 5 5 0 0 0
.....................................................................................................................ACAATCATGTGCATATGAATAGGGC............................................................................................................. 25 0 6 0.83 5 5 0 0 0
TATGCGTGTGCAGTTGCGGGC...................................................................................................................................................................................................................................... 21 0 9 0.78 7 2 0 4 1
....................................................................................................................TACAATCATGTGCATATGAATAGGGCA............................................................................................................ 27 0 6 0.67 4 3 1 0 0
............................................TACAGCTATGTTTTGGACACAAGC....................................................................................................................................................................................... 24 0 16 0.63 10 10 0 0 0
............................................TACAGCTATGTTTTGGACACAAGCAAG.................................................................................................................................................................................... 27 0 5 0.60 3 3 0 0 0
.............................TACGTGTGAGTACAGTACAGCTA....................................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0
.....................................................................AGAACAACAAAGCTATGCGCGTAAGAG........................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0
....................................................................................................................................................................................................ACCAGACCCCCTGAACGGCT................................... 20 0 4 0.50 2 0 0 2 0
.............................................ACAGCTATGTTTTGGACACAAGCAAG.................................................................................................................................................................................... 26 0 5 0.40 2 2 0 0 0
............................................TACAGCTATGTTTTGGACACAAGCAAGA................................................................................................................................................................................... 28 0 5 0.40 2 2 0 0 0
....................................................................................................................TACAATCAGGTGCATATGAATAGGG.............................................................................................................. 25 1 6 0.33 2 2 0 0 0
............................................................................CAAAGCTATGCGCGTAAGAGTAGTTACT................................................................................................................................................... 28 0 3 0.33 1 1 0 0 0
....................................................................................................................TACAATCATGTGCATATGAATAGGGCAA........................................................................................................... 28 1 6 0.33 2 2 0 0 0
............................................................................................................................................GCAGTTGTAATATACACGAACATTGAAC................................................................................... 28 0 6 0.33 2 2 0 0 0
...................................................................................................TTACTTAGGCGGTGCAATACAATCAT.............................................................................................................................. 26 0 3 0.33 1 1 0 0 0
....................................................................................................................TACAATCATGTGCATATGAATGGGGCAG........................................................................................................... 28 1 3 0.33 1 1 0 0 0
.........................................................................................................................TCATGTGCATATGAATAGGGC............................................................................................................. 21 0 7 0.29 2 0 0 2 0
..........................................................................................................................................................................................TTCTCAACATACCAGACCCCCTGAACGGC.................................... 29 0 4 0.25 1 1 0 0 0
...........................................................................................................................................................................................TCTCAACATACCAGACCCCCTGAAC....................................... 25 0 4 0.25 1 1 0 0 0
..............................................................................................................................................................................................CAACATACCAGACCCCCTGAAC....................................... 22 0 4 0.25 1 1 0 0 0
............................................................................................................................................................................................CTCAACATACCAGACCCCCTGAACGG..................................... 26 0 4 0.25 1 1 0 0 0
.......................................................TTTGGACACAAGCAAGAACAA............................................................................................................................................................................... 21 0 5 0.20 1 1 0 0 0
...........................................................GACACAAGCAAGAACAACAAAGCTA....................................................................................................................................................................... 25 0 5 0.20 1 1 0 0 0
................................................GCTATGTTTTGGACACAAGCAAG.................................................................................................................................................................................... 23 0 5 0.20 1 0 1 0 0
....................................................................................................................CACAATCATGTGCATATGAATAGGGC............................................................................................................. 26 1 6 0.17 1 1 0 0 0
....................................................................................................................TACAATCATGTGCATATGAATAGGGCT............................................................................................................ 27 1 6 0.17 1 1 0 0 0
........................................................................................................................................................................TAAAACTACGCGGCAAATTTCTCAACA........................................................ 27 0 6 0.17 1 1 0 0 0
................................................................................................................GCAATACAATCATGTGCATATGAATGGG............................................................................................................... 28 1 6 0.17 1 1 0 0 0
......................................................................................................................CAATCATGTGCATATGAATAGGGC............................................................................................................. 24 0 6 0.17 1 1 0 0 0
..............................................................................................................................................................................TACGCGGCAAATTTCTCAACATACC.................................................... 25 0 6 0.17 1 1 0 0 0
.........................................................................................................................................................................AAAACTACGCGGCAAATTTCTCAACA........................................................ 26 0 6 0.17 1 1 0 0 0
......................................................................................................................................................TATACACGAACATTGAACTAAAAC............................................................................. 24 0 7 0.14 1 1 0 0 0
....................................................................................................................TACAATCATGTGCATATGAATAGGA.............................................................................................................. 25 1 7 0.14 1 1 0 0 0
...................................................................................................................................................TAATATACACGAACATTGAACTAAAAC............................................................................. 27 0 7 0.14 1 1 0 0 0
....................................................................................................................TACAATCAAGTGCATATGAATAGGG.............................................................................................................. 25 1 7 0.14 1 1 0 0 0
...................................................................................................................CTACAATCATGTGCATATGAATAG................................................................................................................ 24 1 7 0.14 1 1 0 0 0
............................................................................................................................TGTGCATATGAATAGGGC............................................................................................................. 18 0 7 0.14 1 1 0 0 0
.........................................................................................................................TCATGTGCATATGAATAGG............................................................................................................... 19 0 7 0.14 1 0 1 0 0
............................................................................................................................................GCAGTTGTAATATACACGAACATT....................................................................................... 24 0 7 0.14 1 1 0 0 0
.................................................................................................................................................TGTAATATACACGAACATTGAACTATG............................................................................... 27 2 7 0.14 1 1 0 0 0
.................................................................................................................................................TGTAATATACACGAACATTGAACTAAAAC............................................................................. 29 0 7 0.14 1 1 0 0 0
...................................................................................................................................................TAATATACACGAACATTGAACTAAAACTA........................................................................... 29 0 7 0.14 1 1 0 0 0
.....................................................................................................................................................................................CAAATTTCTCAACATACCAGA................................................. 21 0 7 0.14 1 1 0 0 0
...........................................................................................................................ATGTGCATATGAATAGGGCA............................................................................................................ 20 0 7 0.14 1 0 1 0 0
.............................................ACAGCTATGTTTTGGACACAAGCAA..................................................................................................................................................................................... 25 0 16 0.13 2 2 0 0 0
..TGCGTGTGCAGTTGCGGG....................................................................................................................................................................................................................................... 18 0 9 0.11 1 1 0 0 0
.ATGCGTGTGCAGTTGCGGGC...................................................................................................................................................................................................................................... 20 0 9 0.11 1 1 0 0 0
TATGCGTGTGCAGTTGCGGG....................................................................................................................................................................................................................................... 20 0 9 0.11 1 1 0 0 0
.....GTGTGCAGTTGCGGGCTTTAG................................................................................................................................................................................................................................. 21 0 9 0.11 1 1 0 0 0
..TGCGTGTGCAGTTGCGGGC...................................................................................................................................................................................................................................... 19 0 9 0.11 1 1 0 0 0
................................................................................................................................................TTGTAATATACACGAACATTGA..................................................................................... 22 0 10 0.10 1 1 0 0 0
............................................GACAGCTATGTTTTGGACACAAGCA...................................................................................................................................................................................... 25 1 16 0.06 1 1 0 0 0
............................................TACAGCTAAGTTTTGGACACAAGCAA..................................................................................................................................................................................... 26 1 16 0.06 1 1 0 0 0
............................................TACAGCTAAGTTTTGGACACAAGC....................................................................................................................................................................................... 24 1 16 0.06 1 1 0 0 0
.............................................ACAGCTATGTTTTGGACACAAGCA...................................................................................................................................................................................... 24 0 16 0.06 1 1 0 0 0
............................................TACAGCTATGTTTTGGACAGAAG........................................................................................................................................................................................ 23 1 16 0.06 1 1 0 0 0
............................................TACAGCTAGGTTTTGGACACAAG........................................................................................................................................................................................ 23 1 16 0.06 1 1 0 0 0
............................................TACAGCTACGTTTTGGACACAAGCA...................................................................................................................................................................................... 25 1 16 0.06 1 1 0 0 0
.............................................ACAGCTATGTTTTGGACACAAG........................................................................................................................................................................................ 22 0 16 0.06 1 1 0 0 0
.............................................ACAGCTATGTTTTGGACACAAGC....................................................................................................................................................................................... 23 0 16 0.06 1 1 0 0 0
.............................................ACAGCTATGTTTTGGACCCAAG........................................................................................................................................................................................ 22 1 16 0.06 1 1 0 0 0
............................................TACAGCTATGTTATGGACACAAG........................................................................................................................................................................................ 23 1 16 0.06 1 0 0 1 0
............................................TACAGCTATGTTTTGGACACA.......................................................................................................................................................................................... 21 0 17 0.06 1 0 0 1 0
............................................TACAGCTATGTTTTGAAAAA........................................................................................................................................................................................... 20 3 20 0.05 1 1 0 0 0
.........GCAGTTGGGGGCATTAGTA............................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 1

Anti-sense strand reads

ATACGCACACGTCAACGCCCGAAATCCTCATGCACACTCATGTCATGTCGATACAAAACCTGTGTTCGTTCTTGTTGTTTCGATACGCGCATTCTCATCAATGAATCCGCCACGTTATGTTAGTACACGTATACTTATCCCGTCAACATTATATGTGCTTGTAACTTGATTTTGATGCGCCGTTTAAAGAGTTGTATGGTCTGGGGGACTTGCCGACAAGTCCTGTTCCCTTCGTGTCGTTCAAACCTTTG
*************************************************************************************************************.............(((((((((....(((..((((.....))))...)))....)))))))))..........********************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V042
embryo
 V111
male body
............................................................................................................................ACACGTATACTTATCCCGTCAACATT..................................................................................................... 26 0 4 8.75 35 35 0 0 0
...................................................................................................................................................................................................................GCCGACAAGTCCTGTTCCCTTCGTGT.............. 26 0 2 5.00 10 10 0 0 0
............................CATGCACACTCATGTCATGTCGATAC..................................................................................................................................................................................................... 26 0 2 4.00 8 8 0 0 0
..................................................................................................................................................................................................................TGCCGACAAGTCCTGTTCCCTTCGTGT.............. 27 0 2 3.50 7 7 0 0 0
..............................................................................................................................ACGTATACTTATCCCGTCAACATT..................................................................................................... 24 0 4 3.25 13 13 0 0 0
............................................................................................................................ACACGTATACTTACCCCGTCAACATT..................................................................................................... 26 1 4 2.75 11 11 0 0 0
......................................................................................................GAATCCGCCACGTTATGTTAGTAC............................................................................................................................. 24 0 3 2.33 7 6 1 0 0
..............................TGCACACTCATGTCATGTCGATAC..................................................................................................................................................................................................... 24 0 2 2.00 4 4 0 0 0
.....................................................................................................................................................................................................................CGACAAGTCCTGTTCCCTTCGTGT.............. 24 0 2 2.00 4 4 0 0 0
.............................ATGCACACTCATGTCATGTCGATAC..................................................................................................................................................................................................... 25 0 2 1.50 3 3 0 0 0
.........................................................................................................................AGTACACGTATACTTATCCCGTCAACATT..................................................................................................... 29 0 4 1.25 5 5 0 0 0
............................................................................................................................ACACGTATACTTATCCCGTCAACAT...................................................................................................... 25 0 4 1.25 5 5 0 0 0
................GCCCGAAATCCTCATGCACACTCATGT................................................................................................................................................................................................................ 27 0 2 1.00 2 2 0 0 0
..ACGCACACGTCAACGCCCGAAATCCT............................................................................................................................................................................................................................... 26 0 2 1.00 2 2 0 0 0
..........................................................................................................................GTACACGTATACTTATCCCGTCAACATT..................................................................................................... 28 0 4 1.00 4 4 0 0 0
.....................................................................TCTTGTTGTTTCGATACGCGCATTCT............................................................................................................................................................ 26 0 2 1.00 2 2 0 0 0
....................................................................................................................................................................................................................CCGACAAGTCCTGTTCCCTTCGTGT.............. 25 0 2 1.00 2 2 0 0 0
...................................................................................................................................................................................................................GCCGACAAGTCCTGTTCCCTTCGTG............... 25 0 2 1.00 2 2 0 0 0
...............................GCACACTCATGTCATGTCGAT....................................................................................................................................................................................................... 21 0 2 1.00 2 0 2 0 0
..............................................................................................................................ACGTATACTTATCCCGTCAACAT...................................................................................................... 23 0 4 0.75 3 3 0 0 0
..............................................................................................................................ACGTATACTTACCCCGTCAACATT..................................................................................................... 24 1 4 0.75 3 3 0 0 0
........................................................................TGTTGTTTCGATACGCGCATTCTCAT......................................................................................................................................................... 26 0 3 0.67 2 2 0 0 0
......................................................................................................GAATCCGCCACGTTAGGTTAGTAC............................................................................................................................. 24 1 3 0.67 2 2 0 0 0
......................................................................................................................................................................TGATTTTGATGCGCCGTTTAAAGAGT........................................................... 26 0 6 0.67 4 1 0 0 3
...........................................................................................................................TACACGTATACTTATCCCGTCAACATT..................................................................................................... 27 0 4 0.50 2 2 0 0 0
...........................ACATGCACACTCATGTCATGTCGATAC..................................................................................................................................................................................................... 27 1 2 0.50 1 1 0 0 0
...................................................................................................................................................................................................................GCCGACAAGTCCTGTTCCCTTCGT................ 24 0 2 0.50 1 1 0 0 0
.....................................................................................................................................................................................................................CGACAAGTCCTGTTACCTTCGTG............... 23 1 2 0.50 1 1 0 0 0
.............................ATGCACACTCATGTCATGTCGATA...................................................................................................................................................................................................... 24 0 2 0.50 1 1 0 0 0
..................................................................................................................................................................................................................TGCCGACAAGTCCTGTTCCCTTCGT................ 25 0 2 0.50 1 1 0 0 0
.......................................................................................................................................................................................................................ACAAGTCCTGTTCCCTTCGTGTCGT........... 25 0 2 0.50 1 1 0 0 0
.............................................................................................................................................................................................................GGACTTGCCGACAAGTCCTGTTCCCTT................... 27 0 2 0.50 1 1 0 0 0
..............................TGCACACTCATGTCATGTCGAT....................................................................................................................................................................................................... 22 0 2 0.50 1 1 0 0 0
...............................GCACACTCATGTCATGTCGATAC..................................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0
..............................................................................................................................................................................................................AACTTGCCGACAAGTCCTGTTCCCT.................... 25 1 2 0.50 1 1 0 0 0
..........................CTCATGCACACTCATTTCATGTCGATAC..................................................................................................................................................................................................... 28 1 2 0.50 1 1 0 0 0
...........................................................................................................................................................................................................GGGGACTTGCCGACAAGTCCTGTTCCCT.................... 28 0 2 0.50 1 1 0 0 0
............................CATGCACACTCATGTCAGGTCGATAC..................................................................................................................................................................................................... 26 1 2 0.50 1 1 0 0 0
............................CATGCACACTCATGTCGTGTCGATA...................................................................................................................................................................................................... 25 1 2 0.50 1 1 0 0 0
......................................................................................................................................................................................................................GACAAGTCCTGTTCCCTTCGTGT.............. 23 0 2 0.50 1 1 0 0 0
...........................................................................................................................................................................TTGATGCGCCGTTTAAAGAGTTGTAT...................................................... 26 0 6 0.50 3 3 0 0 0
.............................................................................................CTCATCAATGAATCCGCCACGTTATGT................................................................................................................................... 27 0 4 0.50 2 2 0 0 0
..................CCGAAATCCTCATGCACACTCATGT................................................................................................................................................................................................................ 25 0 2 0.50 1 0 0 1 0
............................CATGCACACTCATGTCATGTCGATA...................................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0
...............................................................................................................................CGTATACTTATCCCGTCAACATT..................................................................................................... 23 0 7 0.43 3 3 0 0 0
..................................................................................................................................................................................................................................TCCCTTCGTGTCGTTCAAACCTTT. 24 0 3 0.33 1 1 0 0 0
...................................................................................................................................................................................................ATGGTCTGGGGGACTTGCCGACAAGT.............................. 26 0 3 0.33 1 1 0 0 0
...................................................................................................................................................................................................................................CCCTTCGTGTCGTTCAAACCTTT. 23 0 3 0.33 1 1 0 0 0
.......................................................................................................AATCCGCCACGTTATGTTAGTACA............................................................................................................................ 24 0 3 0.33 1 1 0 0 0
...................................................................................................AATGAATCCGCCACGTTATGTTAGTAC............................................................................................................................. 27 0 3 0.33 1 1 0 0 0
.......................................................................................CGCATTCTCATCAATGAATCCGCCACG......................................................................................................................................... 27 0 3 0.33 1 1 0 0 0
..............................................................................TTCGATACGCGCATTCTCATCAATGAAT................................................................................................................................................. 28 0 3 0.33 1 0 0 1 0
.........................................................................GTTGTTTCGATACGCGCATTCTCAT......................................................................................................................................................... 25 0 3 0.33 1 1 0 0 0
.........................................................................GTTGTTTCGATACGCGCATTCTC........................................................................................................................................................... 23 0 3 0.33 1 1 0 0 0
................................................................................................................................................................................................................................GTTCCCTTCGTGTCGTTCAAACCTTT. 26 0 3 0.33 1 1 0 0 0
..................................................................................................CAATGAATCCGCCACGTTATGTTAGTAC............................................................................................................................. 28 0 3 0.33 1 1 0 0 0
.....................................................................................................................................................................................................................AGACAAGTCCTGTTCCCTTCGTGT.............. 24 1 3 0.33 1 1 0 0 0
.....................................................................................................................................................................................................GGTCTGGGGGACTTGCCGACAAGT.............................. 24 0 3 0.33 1 1 0 0 0
..............................................................................................................CACGTTATGTTAGTACACGTATACTTAT................................................................................................................. 28 0 7 0.29 2 2 0 0 0
............................................................................................................GCCACGTTATGTTAGTACACGTAT....................................................................................................................... 24 0 7 0.29 2 2 0 0 0
..........................................................................................................................GTACACGTATACTTATCCCGTCAACATTC.................................................................................................... 29 1 4 0.25 1 1 0 0 0
...........................................................................................................................TACACGTATACTTACCCCGTCAACAT...................................................................................................... 26 1 4 0.25 1 1 0 0 0
.............................................................................................................................CACGTATACTTATCCCGTCAACATT..................................................................................................... 25 0 4 0.25 1 1 0 0 0
.......................................................................................................................................................................................TTAAAGAGTTGTATGGTCTGGGGGACT......................................... 27 0 4 0.25 1 1 0 0 0
............................................................................................................................ACACGTATACTTACCCCGTCAACAT...................................................................................................... 25 1 4 0.25 1 1 0 0 0
............................................................................................................................ACACGTATACTTATCCCGTCAACA....................................................................................................... 24 0 4 0.25 1 1 0 0 0
................................................................................................................................GTATACTTATCCCGTCAACATT..................................................................................................... 22 0 8 0.25 2 2 0 0 0
...........................................................................................................................AACACGTATACTTATCCCGTCAACATT..................................................................................................... 27 1 4 0.25 1 1 0 0 0
.........................................................................................................................AGTACACGTATACTTACCCCGTCAACATT..................................................................................................... 29 1 4 0.25 1 1 0 0 0
........................................................................................................................................................................................TAAAGAGTTGTATGGTCTGGGGGACT......................................... 26 0 4 0.25 1 1 0 0 0
...........................................................................................................................TACACGTATACTTATCCCGTCAACAT...................................................................................................... 26 0 4 0.25 1 1 0 0 0
.............................................................................................................................CACGTATACTTACCCCGTCAACATT..................................................................................................... 25 1 4 0.25 1 1 0 0 0
............................................................................................................GCCACGTTATGTTAGTACAC........................................................................................................................... 20 0 8 0.25 2 0 2 0 0
............................................................................................................................ACACGTATACTTATACCGTCAACATT..................................................................................................... 26 1 4 0.25 1 1 0 0 0
.............................................................................................CTCATCAATGAATCCGCCACGTTATGTT.................................................................................................................................. 28 0 4 0.25 1 1 0 0 0
.TACGCACACGTCAACGCCCGAAAT.................................................................................................................................................................................................................................. 24 0 9 0.22 2 2 0 0 0
...CGCACACGTCAACGCCCGAAAT.................................................................................................................................................................................................................................. 22 0 9 0.22 2 2 0 0 0
...................................................................GTTCTTGTTGTTTCCATACGCGCAT............................................................................................................................................................... 25 1 5 0.20 1 1 0 0 0
.............................................................................................................................CACGTATACTTATCCCATCAACATT..................................................................................................... 25 1 5 0.20 1 1 0 0 0
............................................................................................................................ACAGGTATACTTATCCCGTCAACAT...................................................................................................... 25 1 5 0.20 1 1 0 0 0
...........................................................CTGTGTTCGTTCTTGTTGTTTCGA........................................................................................................................................................................ 24 0 5 0.20 1 1 0 0 0
...................................................................GTTCTTGTTGTTTCGATACGCGCAT............................................................................................................................................................... 25 0 5 0.20 1 0 0 1 0
............................................................................................................................ACACGTATACTTACCCCATCAACATT..................................................................................................... 26 2 5 0.20 1 1 0 0 0
..........................................................................................................................................CCCGTCAACATTATATGTGCTTGTAACT..................................................................................... 28 0 5 0.20 1 1 0 0 0
..................................................GAAAAAAACCTGTGTTCGTTCTTGTTGT............................................................................................................................................................................. 28 3 5 0.20 1 0 0 0 1
............................................................................................................................ACACGTATACTTATCCCATCAACATT..................................................................................................... 26 1 5 0.20 1 1 0 0 0
............................................................................................................................ACACGTATACTTACCCAGTCAACAT...................................................................................................... 25 2 5 0.20 1 1 0 0 0
.............................................................................................................................................................................GATGCGCCGTTTAAAGAGATGTATGGT................................................... 27 1 6 0.17 1 1 0 0 0
......................................................................................................................GTTAGTACACGTATACTTATCCCGT............................................................................................................ 25 0 6 0.17 1 1 0 0 0
............................................................................................................................ACGCGTATACTTATCCCGTCAACATT..................................................................................................... 26 1 6 0.17 1 1 0 0 0
...........................................................................................................................................................................TTGATGCGCCGTTTAAAGAGTTGT........................................................ 24 0 6 0.17 1 1 0 0 0
...................................................................................................................................................ATTATATGTGCTTGTAACTTGAT................................................................................. 23 0 7 0.14 1 1 0 0 0
...............................................................................................................................CGTATACTTATCCCGTCAACATTC.................................................................................................... 24 1 7 0.14 1 1 0 0 0
.................................................................................................................GTTATGTTAGTACACGTATACTTA.................................................................................................................. 24 0 7 0.14 1 1 0 0 0
..............................................................................................................CACGTTATGTTAGTACACGTATACTT................................................................................................................... 26 0 7 0.14 1 1 0 0 0
..............................................................................................................CACGTTATGTTAGTACACGTATAC..................................................................................................................... 24 0 7 0.14 1 1 0 0 0
...............................................................................................................ACGTTATGTTAGTACACGTATACTTA.................................................................................................................. 26 0 7 0.14 1 1 0 0 0
...........................................................................................................CGCCACGTTATGTTAGTACACGTATACT.................................................................................................................... 28 0 7 0.14 1 1 0 0 0
...........................................................................................................CGCCACGTTATGTTAGTACACGTATAC..................................................................................................................... 27 0 7 0.14 1 1 0 0 0
...........................................................................................................CGCCACGTTATGTTAGTACACGT......................................................................................................................... 23 0 7 0.14 1 1 0 0 0
...CGCACACGTCAACGCCCGAAATC................................................................................................................................................................................................................................. 23 0 9 0.11 1 1 0 0 0
....GCACACGTCAACGCCCGAAAT.................................................................................................................................................................................................................................. 21 0 9 0.11 1 1 0 0 0
................................................................................................................................ATATACTTACCCCGTCAACATT..................................................................................................... 22 2 9 0.11 1 1 0 0 0
......ACACGTCAACGCCCGAAAT.................................................................................................................................................................................................................................. 19 0 9 0.11 1 1 0 0 0
.TACGCACACGTCAACGCCCGAAA................................................................................................................................................................................................................................... 23 0 9 0.11 1 1 0 0 0
ATACGCACACGTCAACGCCCGAAAT.................................................................................................................................................................................................................................. 25 0 9 0.11 1 1 0 0 0
.............................................TGTCGATACAAAACCTGTGTTCGT...................................................................................................................................................................................... 24 0 16 0.06 1 1 0 0 0
..............................................GTCGATACAAAACCTGTGTTCGT...................................................................................................................................................................................... 23 0 16 0.06 1 1 0 0 0
.............................................TGTCGATACAAAACCTGTGTT......................................................................................................................................................................................... 21 0 17 0.06 1 0 0 1 0
..............................................GTCGATACAAAACCTGTGT.......................................................................................................................................................................................... 19 0 18 0.06 1 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_247:12406-12656 - dpe_1240 TATGCGTGTGCAGTTGCGGGCTTTAGGAGTACGTGTGAGTACAGTACAGCTATGTTTTGGACACAAGCAAGAACAACAAAGCTATGCGCGTAAGAGTAGTTACTTAGGC-GGTGCAAT----------ACAATCATGTGCATATGAATAGGG-CAGTT--GTAA-------TATACA----------------------C-GAAC------------------------ATTGAACTA--------AAACTACGCGGCAAATTTCTCAACATACCAGACCCCCTGAACGGCTGTTCAGGACAAGGGAA----GCACAGCAAGTTTGGAAAC---------------------------------
dp5 Unknown_group_162:21107-21361 + TATGCGTGTGCAGTTGCGGGCTTTAGCTATACGCCTGAGTGCATTACAGCTATGTTTTGGACACAAGCAATAACAACAAAGCTATGCGCGTAAAAGTAGTTACTTAAGC-GGTGCAAT----------ACAATCATGTGCATATGAATAGGG-CACTT--GAAA-------TATACA----------------------C-GAAC------------------------ATTGAACTA--------AAACTACGCGGCAAATTTCTCAACATACCAGACCCCCTGAACGGCTGTTCAGAACAAGGGAACAAGGCACAGCAAGTTTGGAAAC---------------------------------
droWil2 scf2_1100000004888:17970-18159 - GGA-----------------------------------------------------------------------------------------------------------GGTACAATCGTTGCGTTCACAAACAAATGCATACGTAAAGAA-CAATA--GAAA------ATATACAGTGGTTCGATTACA--------T-GAAT------------------------ATTGACTTAAA--CTATAT-AAAGTCGTTCAATTTCCAAACATACCAACCGCCCTGAACGATCGTTCAGAATAACGGTA----GAACGGCCACCTTTACAATTGGGCGCTTGG------------------GCAC
droAna3 scaffold_13260:453364-453365 - AT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396437:17133-17346 - TG--------CAATTTCGG-------CTATGCGTGTGAGC---TTAAAGCTCCCA----AATGGT-----AAACAAGACAATGATGTGCGCAAAAATAGGTACGATAA---------------------------------------------------------------------------------TAAGAAATTAATTAACAAGTAAAGAAGCAAATGTAATACTATTTA----AATGCAAAAT-AAAGACGAACTATTTCTCAACATACCGGCCCCCCTGAACGACGGTTCAGTTCAAAGGAA----GCACAGCTATTTTCGTAAT---------------------------------
droKik1 scf7180000298464:4419-4646 - GCTG------CATTTTCGG-------CTATGCATGTGAGC---TTTAAGCTTTCA----TAAAGT-----AAACAATACAGTGATGCGCAATTAACTAGGTGCAATTA---------------------------------------------------------------------------------TATGAAATTAA-GAACAAGTAAAGAAGCAA-----------------------TGA-AA-ATGACCTATCTATTTCTCAACATACCGGCCCCCCTAAACGACTGTTCAGTTCAAAGGAA----GCACAGCAATTTTCGTAATAGACCGCTTGTAGGTTCCTCTAGCGGTTTTCAC
droEle1 scf7180000490989:10595-10733 + AATGTG-------------------------CTCGCGTGT---GTAGG--------------------------------------------------------------GATATAAT----------ACAA------------------------TT--ATAA-------TATAC---------------------TAT-AAACA---------------------------AATTA--------AATGTATAGGA---TGTCCGCTTCTTACCGGCCCTCCCGAACAGTTGTTCAGCAAAGGGGTA----AGACTGCCATTTTGGTTATTGGAC----------------------------
droRho1 scf7180000777133:12973-13205 - G----------------------------TGCGTGTGAGC---TTAAAGCTTTTA----TGTAGA-----AAACAAAACAATGATGTGCATTTAAATAGGTGCGATTAG-AAAACAAA----------ACAATGATGAGTGTTTAACTAGGAGCGGTTA--------------TATG----------------------C-AGA--------------------------------------TATTAA-ATGACCGATCTATTTCTCAACATACTGGCCCCCATGAACGACGGTTCAGTTCAAAGGAA----GCACAGAAATGTTCGTAATGGGCCGCTGGTAGATTCCTCTGGCAGTATTAAC
droBia1 scf7180000299442:8523-8743 + TG--------CAATTTCGG-------CTATGCGCGTGAGC---TTAAAGCTCCCA----AATGGT------TACAATACAATGATGTGCGCAAAAATAGGTACTATAGG-TAA--------------------------------------------------TAGGTAAAAATA---------GGTTATAGGTAAATAG-GCAAAAGTAAAGAAGCAAATGTAATACTATTTA----AATTCAACAT-AAAGACGAACTATTTCCCAACATACCGGCCCCCCTGAACGACGGTTCAGTTCAAAGGAA----GCACAGC---------------------------------------------
droTak1 scf7180000413225:20717-20907 - AA-----------------------------------------------------------------------CAATACAATGATGAGCATATAACTAGGTGCGATTAG-GAAACAAT----------ACAATGATGAGCATTTAACTAGGTGCGATTAGGAAA------CAATACA------------------ATGAT-GAGC------------------------ATTTAACAA----TAATAA-AATACCGATCTATTTCACAACATACCGGCCCCCCTGAACGACGGTTCAGTTCAAAGGAA----GCACGGCAATTTTCGTAAT---------------------------------
droEug1 scf7180000409708:64741-64955 + TAC-----TGCAATTTCGG-------GTATGCGTGTGAAC---TTAAAGCTTTGA----TACACA-----ATACAAAACAATAATGTGCATTTAACTAACTACGATTAGAAAAACAAT----------ACAATGATCAGCATTTAACTAAGTGCGATTT--------------CACA----------------------A-T------------------------------------AA--TGATAA-ATGATCGATCTATTCTTTAACATACCGGCC--CCTGAACGACGGTGCAGTTCAAAGGAA----GCACAGCAATTTTCGTAAT---------------------------------
dm3 chr3L:5108819-5108917 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCCAAACATACCGGCCCCCCTGAACGGTTGTTCAGCAGAGAGGCA----GTACAGCGATTTTGGCAATTGGGCGTTTGTATAATCCGTGAGCAGTCTTCAC
droSim2 2r:2321573-2321647 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACATACCGGACCCCCTGAACGGACGTTGACCATAGGGGCA----GTACAGCCACTATAGCAATTGGG------------------GCAGTCTTCAC
droSec2 scaffold_84:102233-102298 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCCAAACATACCGGCCCCACTGAACGGTTGTTCACCAGAGAGGCA----GTACAGCGATTTTGGCAAT---------------------------------
droYak3 3L:23762024-23762097 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCCGAACATACCGGCCGCCCTGAACGATTGTTCAGCACAGAGGCA----GCGCAGT-------GCAATAGGGCGTTTATAAAA------------------
droEre2 scaffold_4784:22845089-22845186 - AAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGA----------------------T-GAAG------------------------AGTGGA--A--------AAACAGGGTGTCTTGTTCCCAAACATACCGGTCCCCCTGAACGTTTGTTCTGCATAAGGGCA----ATATTGCGTTTTGGGC------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
TATGCGTGTGCAGTTGCGGGCTTTAGGAGTACGTGTGAGTACAGTACAGCTATGTTTTGGACACAAGCAAGAACAACAAAGCTATGCGCGTAAGAGTAGTTACTTAGGC-GGTGCAAT----------ACAATCATGTGCATATGAATAGGG-CAGTT--GTAA-------TATACA----------------------C-GAAC------------------------ATTGAACTA--------AAACTACGCGGCAAATTTCTCAACATACCAGACCCCCTGAACGGCTGTTCAGGACAAGGGAA----GCACAGCAAGTTTGGAAAC---------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................T----------ACAATCATGTGCATATGAATAGGG-C..................................................................................................................................................................................................................2664.83290218000
.....................................................................................................................T----------ACAATCATGTGCATATGAATAGGG-...................................................................................................................................................................................................................2562.67160160000
.....................................................................................................................T----------ACAATCATGTGCATATGAATAGG.....................................................................................................................................................................................................................2461.338080000
............................................TACAGCTATGTTTTGGACACAAGCA.......................................................................................................................................................................................................................................................................................................25161.19190190000
............................................TACAGCTATGTTTTGGACACAAGCAA......................................................................................................................................................................................................................................................................................................26160.94150141000
............................................TACAGCTATGTTTTGGACACAAG.........................................................................................................................................................................................................................................................................................................23160.88142120000
................................................................................................................................ACAATCATGTGCATATGAATAGGG-...................................................................................................................................................................................................................2460.835050000
................................................................................................................................ACAATCATGTGCATATGAATAGGG-C..................................................................................................................................................................................................................2560.835050000
TATGCGTGTGCAGTTGCGGGC.......................................................................................................................................................................................................................................................................................................................................................2190.787420001
.....................................................................................................................T----------ACAATCATGTGCATATGAATAGGG-CA.................................................................................................................................................................................................................2760.674031000
............................................TACAGCTATGTTTTGGACACAAGC........................................................................................................................................................................................................................................................................................................24160.63100100000
............................................TACAGCTATGTTTTGGACACAAGCAAG.....................................................................................................................................................................................................................................................................................................2750.603030000
.............................TACGTGTGAGTACAGTACAGCTA........................................................................................................................................................................................................................................................................................................................2320.501010000
.....................................................................AGAACAACAAAGCTATGCGCGTAAGAG............................................................................................................................................................................................................................................................................2720.501010000
................................................................................................................................................................................................................................................................................ACCAGACCCCCTGAACGGCT........................................................................2040.502200000
.............................................ACAGCTATGTTTTGGACACAAGCAAG.....................................................................................................................................................................................................................................................................................................2650.402020000
............................................TACAGCTATGTTTTGGACACAAGCAAGA....................................................................................................................................................................................................................................................................................................2850.402020000
............................................................................CAAAGCTATGCGCGTAAGAGTAGTTACT....................................................................................................................................................................................................................................................................2830.331010000
.....................................................................................................................T----------ACAATCATGTGCATATGAATAGGG-CAA................................................................................................................................................................................................................2860.332020000
.......................................................................................................................................................G-CAGTT--GTAA-------TATACA----------------------C-GAAC------------------------ATTGAAC................................................................................................................................2860.332020000
...................................................................................................TTACTTAGGC-GGTGCAAT----------ACAATCAT....................................................................................................................................................................................................................................2630.331010000
....................................................................................................................................TCATGTGCATATGAATAGGG-C..................................................................................................................................................................................................................2170.292200000
......................................................................................................................................................................................................................................................................TTCTCAACATACCAGACCCCCTGAACGGC.........................................................................2940.251010000
.......................................................................................................................................................................................................................................................................TCTCAACATACCAGACCCCCTGAAC............................................................................2540.251010000
..........................................................................................................................................................................................................................................................................CAACATACCAGACCCCCTGAAC............................................................................2240.251010000
........................................................................................................................................................................................................................................................................CTCAACATACCAGACCCCCTGAACGG..........................................................................2640.251010000
.......................................................TTTGGACACAAGCAAGAACAA................................................................................................................................................................................................................................................................................................2150.201010000
...........................................................GACACAAGCAAGAACAACAAAGCTA........................................................................................................................................................................................................................................................................................2550.201010000
................................................GCTATGTTTTGGACACAAGCAAG.....................................................................................................................................................................................................................................................................................................2350.201001000
.....................................................................................................................T----------ACAATCATGTGCATATGAATAGGG-CT.................................................................................................................................................................................................................2760.171010000
............................................................................................................................................................................................................................................TA--------AAACTACGCGGCAAATTTCTCAACA.............................................................................................2760.171010000
.................................................................................................................................CAATCATGTGCATATGAATAGGG-C..................................................................................................................................................................................................................2460.171010000
..........................................................................................................................................................................................................................................................TACGCGGCAAATTTCTCAACATACC.........................................................................................2560.171010000
.............................................................................................................................................................................................................................................A--------AAACTACGCGGCAAATTTCTCAACA.............................................................................................2660.171010000
...........................................................................................................................................................................TATACA----------------------C-GAAC------------------------ATTGAACTA--------AAAC..................................................................................................................2470.141010000
.....................................................................................................................T----------ACAATCATGTGCATATGAATAGGA-...................................................................................................................................................................................................................2570.141010000
.................................................................................................................................................................TAA-------TATACA----------------------C-GAAC------------------------ATTGAACTA--------AAAC..................................................................................................................2770.141010000
.......................................................................................................................................TGTGCATATGAATAGGG-C..................................................................................................................................................................................................................1870.141010000
....................................................................................................................................TCATGTGCATATGAATAGG.....................................................................................................................................................................................................................1970.141001000
.......................................................................................................................................................G-CAGTT--GTAA-------TATACA----------------------C-GAAC------------------------ATT....................................................................................................................................2470.141010000
.............................................................................................................................................................T--GTAA-------TATACA----------------------C-GAAC------------------------ATTGAACTA--------TG....................................................................................................................2770.141010000
.............................................................................................................................................................T--GTAA-------TATACA----------------------C-GAAC------------------------ATTGAACTA--------AAAC..................................................................................................................2970.141010000
.................................................................................................................................................................TAA-------TATACA----------------------C-GAAC------------------------ATTGAACTA--------AAACTA................................................................................................................2970.141010000
.................................................................................................................................................................................................................................................................CAAATTTCTCAACATACCAGA......................................................................................2170.141010000
......................................................................................................................................ATGTGCATATGAATAGGG-CA.................................................................................................................................................................................................................2070.141001000
.............................................ACAGCTATGTTTTGGACACAAGCAA......................................................................................................................................................................................................................................................................................................25160.132020000
..TGCGTGTGCAGTTGCGGG........................................................................................................................................................................................................................................................................................................................................................1890.111010000
.ATGCGTGTGCAGTTGCGGGC.......................................................................................................................................................................................................................................................................................................................................................2090.111010000
TATGCGTGTGCAGTTGCGGG........................................................................................................................................................................................................................................................................................................................................................2090.111010000
.....GTGTGCAGTTGCGGGCTTTAG..................................................................................................................................................................................................................................................................................................................................................2190.111010000
..TGCGTGTGCAGTTGCGGGC.......................................................................................................................................................................................................................................................................................................................................................1990.111010000
............................................................................................................................................................TT--GTAA-------TATACA----------------------C-GAAC------------------------ATTGA..................................................................................................................................22100.101010000
.............................................ACAGCTATGTTTTGGACACAAGCA.......................................................................................................................................................................................................................................................................................................24160.061010000
.............................................ACAGCTATGTTTTGGACACAAG.........................................................................................................................................................................................................................................................................................................22160.061010000
.............................................ACAGCTATGTTTTGGACACAAGC........................................................................................................................................................................................................................................................................................................23160.061010000
............................................TACAGCTATGTTTTGGACACA...........................................................................................................................................................................................................................................................................................................21170.061100000
dp5
TATGCGTGTGCAGTTGCGGGCTTTAGCTATACGCCTGAGTGCATTACAGCTATGTTTTGGACACAAGCAATAACAACAAAGCTATGCGCGTAAAAGTAGTTACTTAAGC-GGTGCAAT----------ACAATCATGTGCATATGAATAGGG-CACTT--GAAA-------TATACA----------------------C-GAAC------------------------ATTGAACTA--------AAACTACGCGGCAAATTTCTCAACATACCAGACCCCCTGAACGGCTGTTCAGAACAAGGGAACAAGGCACAGCAAGTTTGGAAAC---------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................TACAGCTATGTTTTGGACACAAG.........................................................................................................................................................................................................................................................................................................231334.7745233454010087120
............................................TACAGCTATGTTTTGGACACAAGC........................................................................................................................................................................................................................................................................................................241324.0031202335411201560
............................................TACAGCTATGTTTTGGACACAAGCAA......................................................................................................................................................................................................................................................................................................26139.621250640041230240
...........................................................................................................................................................................TATACA----------------------C-GAAC------------------------ATTGAACTA--------AAAC..................................................................................................................2419.0090300000600
.............................................................................................................................................................................TACA----------------------C-GAAC------------------------ATTGAACTA--------AAACTACGC.............................................................................................................2718.0080200000600
............................................................................................................................................................................................................C------------------------ATTGAACTA--------AAACTACGCGGCAA........................................................................................................2416.0060300000030
............................................................................................................................................................................................................C------------------------ATTGAACTA--------AAACTACGCGGCAAATT.....................................................................................................2716.0060200000310
............................................TACAGCTATGTTTTGGACACAAGCA.......................................................................................................................................................................................................................................................................................................25135.697406410200520
.............................................................................................................................................................................TACA----------------------C-GAAC------------------------ATTGAACTA--------AAACTAC...............................................................................................................2514.0040000000400
..........................................................................................................................................................................................................................................................TACGCGGCAAATTTCTCAACATACCAG.......................................................................................2714.0040300000100
..........................................................................................................................................................................................................................................................TACGCGGCAAATTTCTCAACATACC.........................................................................................2514.0040300000010
......................................................................................................................................................................................................................................................................TTCTCAACATACCAGACCCCCTGAAC............................................................................2614.0040000000400
.............................................................................................................................................................T--GAAA-------TATACA----------------------C-GAAC------------------------ATTGAACTA--------AAAC..................................................................................................................2914.0040000000220
................................................................................................................TGCAAT----------ACAATCATGTGCATATGA..........................................................................................................................................................................................................................2483.883102710200100
......................................................................TAACAACAAAGCTATGCGCGTAAAAG............................................................................................................................................................................................................................................................................2613.0030200000010
.............................................................................................................................................................................TACA----------------------C-GAAC------------------------ATTGAACTA--------AAACTA................................................................................................................2413.0030200000010
............................................................................................................................................................................................................C------------------------ATTGAACTA--------AAACTACGCGGCA.........................................................................................................2313.0030100000200
.................................................................................................................................................................AAA-------TATACA----------------------C-GAAC------------------------ATTGAACTA--------AAAC..................................................................................................................2713.0030000000030
................................................................................................................TGCAAT----------ACAATCATGTGCATATG...........................................................................................................................................................................................................................2382.752201620000220
............................................................................................................................................................................................................C------------------------ATTGAACTA--------AAACTACGCGGC..........................................................................................................2292.56230600100880
.......................................................................................................................................................................................................................................................................TCTCAACATACCAGACCCCCTGAAC............................................................................2512.0020100000100
..........................................................................................................................................................................................................................................................TACGCGGCAAATTTCTCAACATACCAGAC.....................................................................................2912.0020110000000
..................................................................................TATGCGCGTAAAAGTAGTTACTTAAG................................................................................................................................................................................................................................................................2622.0040100000300
..........................................................................................................................................................................................................................................................TACGCGGCAAATTTCTCAACATAC..........................................................................................2412.0020200000000
..................................................................................................................................................................AA-------TATACA----------------------C-GAAC------------------------ATTGAACTA--------AAAC..................................................................................................................2612.0020200000000
.........................................................................................................................................................CACTT--GAAA-------TATACA----------------------C-GAAC------------------------ATTGA..................................................................................................................................2512.0020000000200
....................................................................................................................................................................................................................................................................ATTTCTCAACATACCAGACCCCC.................................................................................2312.0020200000000
...................................................................................................................................................................................................................................................................................................TGTTCAGAACAAGGGAACAAGGCA.................................................2412.0020200000000
.............................................................................................................................................................................TACA----------------------C-GAAC------------------------ATTGAACTA--------AAACTACG..............................................................................................................2612.0020200000000
......................................................................................................................................................................................................................................................................................................TCAGAACAAGGGAACAAGGCACAGC.............................................2512.0020000000020
.............................................ACAGCTATGTTTTGGACACAAG.........................................................................................................................................................................................................................................................................................................22141.862602600000000
.............................................ACAGCTATGTTTTGGACACAAGC........................................................................................................................................................................................................................................................................................................23141.642302300000000
................................................................................................................TGCAAT----------ACAATCATGTGCATATGAA.........................................................................................................................................................................................................................2581.501201100000010
TATGCGTGTGCAGTTGCGGGCTTTAG..................................................................................................................................................................................................................................................................................................................................................2691.44130200000470
............................................TACAGCTATGTTTTGGACACAA..........................................................................................................................................................................................................................................................................................................22171.292202200000000
............................................TACAGCTATGTTTTGGACAC............................................................................................................................................................................................................................................................................................................20201.252502030200000
..TGCGTGTGCAGTTGCGGGCTTTAG..................................................................................................................................................................................................................................................................................................................................................2491.11100100000450
.....................................................................................................................T----------ACAATCATGTGCATATGAATAGGG-C..................................................................................................................................................................................................................26101.10110810100010
...................................................................................................................................................TAGGG-CACTT--GAAA-------TATACA----------------------C-GAAC------------------------AT.....................................................................................................................................2711.0010000000100
........TGCAGTTGCGGGCTTTAGCTATACGCC.........................................................................................................................................................................................................................................................................................................................................2711.0010100000000
............................................................................................................................................................TT--GAAA-------TATACA----------------------C-GAAC------------------------ATTGAACTA--------......................................................................................................................2611.0010100000000
............................................................................................AAAGTAGTTACTTAAGC-GG............................................................................................................................................................................................................................................................1921.0020000000020
....................................................................................................................................................................................................................................................................................................GTTCAGAACAAGGGAACAAGGCAC................................................2411.0010010000000
......................................................................................................................................................................................................................................................................................................TCAGAACAAGGGAACAAGGCACA...............................................2311.0010100000000
...................................................................................................................................................................A-------TATACA----------------------C-GAAC------------------------ATTGAACTA--------AAAC..................................................................................................................2511.0010100000000
..........................................................................................................................................................................................................................................................TACGCGGCAAATTTCTCAACATACCAGA......................................................................................2811.0010100000000
.......................................................................................................................................................................................................................................................................TCTCAACATACCAGACCCCCTGAACG...........................................................................2611.0010100000000
............................................................................................................................................................................................................................................................................................................CAAGGGAACAAGGCACAGCAAGTT........................................2411.0010100000000
............................................................................................................................................................................................................................................................CGCGGCAAATTTCTCAACATACCAGAC.....................................................................................2711.0010100000000
.............................................................................................................................................................................TACA----------------------C-GAAC------------------------ATTGAACTA--------AAACTACGCGG...........................................................................................................2911.0010100000000
.......................................................................................................................................................................................................................................................................TCTCAACATACCAGACCCCCTGAACGAT.........................................................................2821.0020000000200
...........................................................................................................................................................................................................................................................................................TGAACGGCTGTTCAGAACAAGGG..........................................................2311.0010100000000
......................................................................................................................................................................................................................................TTGAACTA--------AAACTACGCGGCAAATT.....................................................................................................2511.0010100000000
.........................................................................................................................................................................................................................................................................................................GAACAAGGGAACAAGGCACAGCAAG..........................................2511.0010100000000
..........................................................................................................................................................................................................................................................TACGCGGCAAATTTCTCAACATACCA........................................................................................2611.0010010000000
...................................................................................................................................................................................................................................................................................................TGTTCAGAACAAGGGAACAAGGCACA...............................................2611.0010100000000
........................................................................................................................................................................................................................................................................................................AGAACAAGGGAACAAGGCACAGCAAGT.........................................2711.0010100000000
................................................................................................................................................................GAAA-------TATACA----------------------C-GAAC------------------------ATTGAACTA--------AAA...................................................................................................................2711.0010100000000
............................................................................................................................................................................................................................................TA--------AAACTACGCGGCAAATTTCTCAACA.............................................................................................2711.0010100000000
.............TTGCGGGCTTTAGCTATACGCC.........................................................................................................................................................................................................................................................................................................................................2211.0010000000010
.............................................................................................................................................................................................................................................A--------AAACTACGCGGCAAATTTCTCAACA.............................................................................................2611.0010100000000
............................................................................................................................................................................................................................................TA--------AAACTACGCGGCAAATTTCTCAA...............................................................................................2511.0010100000000
.............................................................................................................................................................................................................................................................................................AACGGCTGTTCAGAACAAGGGAACAA.....................................................2611.0010100000000
............................................................................................................................................................................ATACA----------------------C-GAAC------------------------ATTGAACTA--------AAAC..................................................................................................................2311.0010100000000
............................................................................................................................................................................................................................................................................................................CAAGGGAACAAGGCACAGCAAGTTTG......................................2611.0010100000000
..........................................................................................................................................................................................................................................................TACGCGGCAAATTTCTCAACATA...........................................................................................2311.0010100000000
....................................................................................................................................................AGGG-CACTT--GAAA-------TATACA----------------------C-GA.................................................................................................................................................................2211.0010000001000
...........................................................................................................................................................................................................................................................ACGCGGCAAATTTCTCAACATACCAGA......................................................................................2711.0010100000000
.............................................................................................................................................................................TACA----------------------C-GAAC------------------------ATTGAACTA--------AAACTACA..............................................................................................................2611.0010100000000
...........................................................................................................................................................................TATACA----------------------C-GAAC------------------------ATTGAACTA--------AAACT.................................................................................................................2511.0010000000100
...........................................................................................................................................CATATGAATAGGG-CACTT--GAAA-------.................................................................................................................................................................................................2211.0010100000000
...................................................................................................................................................................................................................................................................................................TGTTCAGAACAAGGGAACAAGGCACAG..............................................2711.0010100000000
..............................................................................................................................................................................ACA----------------------C-GAAC------------------------ATTGAACTA--------AAACTA................................................................................................................2311.0010100000000
............................................................................................................................................................................................................C------------------------ATTGAACTA--------AAACTACGCGGCAAAT......................................................................................................2611.0010100000000
......................................................................TAACAACAAAGCTATGCGCGTAAA..............................................................................................................................................................................................................................................................................2421.0020100000100
.............................................................................................................................................................................................................................................................................................AACGGCTGTTCAGAACAAGGGAAC.......................................................2411.0010100000000
.......................................................................................................................................................................................................................................................................................................CAGAACAAGGGAACAAGGCACAGC.............................................2411.0010100000000
......................................................................................................................................................................................................................................................................................................TCAGAACAAGGGAACAAGGCACAG..............................................2411.0010100000000
.............................................................................................................................................................................TACA----------------------C-GAAC------------------------ATTGAACTA--------AAACTACGCG............................................................................................................2811.0010100000000
...........................................................................................................................................................................................................................................................................................TGAACGGCTGTTCAGAACAAGGGAAC.......................................................2611.0010000000010
.............................................ACAGCTATGTTTTGGACACAAGCA.......................................................................................................................................................................................................................................................................................................24140.931301300000000
TATGCGTGTGCAGTTGCGGGCTTTAGC.................................................................................................................................................................................................................................................................................................................................................2790.8980300000320
......................................................................TAACAACAAAGCTATGCGCGTA................................................................................................................................................................................................................................................................................2250.8040300001000
TATGCGTGTGCAGTTGCGGG........................................................................................................................................................................................................................................................................................................................................................2090.7870600000010
..TGCGTGTGCAGTTGCGGGCTTTAGC.................................................................................................................................................................................................................................................................................................................................................2590.7870200000050
............................................TACAGCTATGTTTTGGACACAAGCAAT.....................................................................................................................................................................................................................................................................................................27110.7380500100200
............................................TACAGCTATGTTTTGGACACA...........................................................................................................................................................................................................................................................................................................21170.711201100001000
................................................................................................................TGCAAT----------ACAATCATGTGCATATGAATAG......................................................................................................................................................................................................................2880.6350200000300
.........................................................TGGACACAAGCAATAACAACAAAGC..........................................................................................................................................................................................................................................................................................2550.6030000000210
............................................................................................................................................................................................................C------------------------ATTGAACTA--------AAACTACGCGG...........................................................................................................2190.5650400000010
TATGCGTGTGCAGTTGCGG.........................................................................................................................................................................................................................................................................................................................................................1990.5650500000000
.....................................................................................GCGCGTAAAAGTAGTTACTTAAG................................................................................................................................................................................................................................................................2320.5010100000000
..................................................................................TATGCGCGTAAAAGTAGTTACTTAAAA-..............................................................................................................................................................................................................................................................2720.5010100000000
....................................................................................TGCGCGTAAAAGTAGTTACTT...................................................................................................................................................................................................................................................................2120.5010010000000
..............................................................................................AGTAGTTACTTAAGC-GG............................................................................................................................................................................................................................................................1720.5010000000100
..........................................................................................TAAAAGTAGTTACTTAAGC-GG............................................................................................................................................................................................................................................................2120.5010000000010
................................................................................................................TGCAAT----------ACAATCATGTGCATATGAAA........................................................................................................................................................................................................................2680.5040100000030
.........................................................................................................................................................................................................................................................................TCAACATACCAGACCCCCTGAACGAT.........................................................................2620.5010000000100
........................................................................................................................................................................................................................................................................CTCAACATACCAGACCCCCTGAACGAT.........................................................................2720.5010100000000
.............................................ACAGCTATGTTTTGGACACAAGCAA......................................................................................................................................................................................................................................................................................................25140.4360600000000
........TGCAGTTGCGGGCTTTAGCTATACG...........................................................................................................................................................................................................................................................................................................................................2570.4330300000000
............................................TACAGCTATGTTTTGGACA.............................................................................................................................................................................................................................................................................................................19200.4080800000000
..............................................................................................................................................................................................................................................................................ATACCAGACCCCCTGAACGGC.........................................................................2150.4020020000000
.......................................................TTTGGACACAAGCAATAACAACAAAGC..........................................................................................................................................................................................................................................................................................2750.4020100000010
................................................................................................................TGCAAT----------ACAATCATGTGCATAT............................................................................................................................................................................................................................2280.3830300000000
................................................................................................................TGCAAT----------ACAATCATGTGCATATGAAT........................................................................................................................................................................................................................2680.3830300000000
.................................................................................................................GCAAT----------ACAATCATGTGCATATGA..........................................................................................................................................................................................................................2380.3830300000000
......TGTGCAGTTGCGGGCTTTAGCTA...............................................................................................................................................................................................................................................................................................................................................23100.3030000001200
......TGTGCAGTTGCGGGCTTTAGCTATACG...........................................................................................................................................................................................................................................................................................................................................2770.2920100000100
............................................TACAGCTATGTTTTGGACACAAGCAATA....................................................................................................................................................................................................................................................................................................28110.2730300000000
........................................................................................................TAAGC-GGTGCAAT----------ACAATCATGTGCA...............................................................................................................................................................................................................................2640.2510100000000
........................................................................................................TAAGC-GGTGCAAT----------ACAATCATGT..................................................................................................................................................................................................................................2340.2510100000000
...........................................TTACAGCTATGTTTTGGACACAAG.........................................................................................................................................................................................................................................................................................................24130.2330300000000
...........................................TTACAGCTATGTTTTGGACACAAGC........................................................................................................................................................................................................................................................................................................25130.2330200100000
............................................TACAGCTATGTTTTGGACACAAGT........................................................................................................................................................................................................................................................................................................24130.2330300000000
TATGCGTGTGCAGTTGCGGGCTT.....................................................................................................................................................................................................................................................................................................................................................2390.2220200000000
TATGCGTGTGCAGTTGCGGGCTTTA...................................................................................................................................................................................................................................................................................................................................................2590.2220100001000
..............................................................................................................................................................................................................................................................................ATACCAGACCCCCTGAACGG..........................................................................2050.2010100000000
.........................................................TGGACACAAGCAATAACAACAAAGCTA........................................................................................................................................................................................................................................................................................2750.2010100000000
...............................................................................................................................................................................................................................................................................TACCAGACCCCCTGAACGG..........................................................................1950.2010100000000
..................................................................................TATGCGCGTAAAAGTAGTA.......................................................................................................................................................................................................................................................................1950.2010100000000
................................................................................................................................ACAATCATGTGCATATGAATAGGG-...................................................................................................................................................................................................................24100.2020110000000
...............................................................................................................................................................................................................................................................................TACCAGACCCCCTGAACGGC.........................................................................2050.2010100000000
.........................................................TGGACACAAGCAATAACAACAAAG...........................................................................................................................................................................................................................................................................................2450.2010100000000
.....................................................................ATAACAACAAAGCTATGCGCG..................................................................................................................................................................................................................................................................................2150.2010100000000
...................................................................CAATAACAACAAAGCTATGCGCGT.................................................................................................................................................................................................................................................................................2450.2010100000000
......................................................................TAACAACAAAGCTATGCGCG..................................................................................................................................................................................................................................................................................2050.2010100000000
......TGTGCAGTTGCGGGCTTTAGCTAC..............................................................................................................................................................................................................................................................................................................................................24100.2020100000010
..........................................................GGACACAAGCAATAACAACAAAG...........................................................................................................................................................................................................................................................................................2350.2010100000000
................................................................................................................................................................................................................................................................................ACCAGACCCCCTGAACGGC.........................................................................1950.2010100000000
.....................................................................................................................T----------ACAATCATGTGCATATGAATAGGG-CA.................................................................................................................................................................................................................27100.2020200000000
.........................................................TGGACACAAGCAATAACAACAAAGCT.........................................................................................................................................................................................................................................................................................2650.2010100000000
........................................................TTGGACACAAGCAATAACAACAAAGC..........................................................................................................................................................................................................................................................................................2650.2010100000000
.........................................................................................................................................................................................................GAAC------------------------ATTGAACTA--------AAACTACGCGG...........................................................................................................2460.1710100000000
.......................................................TTTGGACACAAGCAATAACAACAA.............................................................................................................................................................................................................................................................................................2460.1710000000010
.............................................ACAGCTATGTTTTGGACACA...........................................................................................................................................................................................................................................................................................................20180.1730300000000
..............................................CAGCTATGTTTTGGACACAAGCAATA....................................................................................................................................................................................................................................................................................................26120.1720000000020
............................................TACAGCTATGTTTTGGACACAAGCAAA.....................................................................................................................................................................................................................................................................................................27200.1530200000100
.........GCAGTTGCGGGCTTTAGCTATACG...........................................................................................................................................................................................................................................................................................................................................2470.1410100000000
..............................................CAGCTATGTTTTGGACACAAGC........................................................................................................................................................................................................................................................................................................22140.1420200000000
............................................TACAGCTATGTTTTGGACACAAGA........................................................................................................................................................................................................................................................................................................24140.1420200000000
..................................................................................................................CAAT----------ACAATCATGTGCATATGAA.........................................................................................................................................................................................................................2380.1310100000000
...............................................................................................................GTGCAAT----------ACAATCATGTGCATATG...........................................................................................................................................................................................................................2480.1310100000000
.................................................................................................................GCAAT----------ACAATCATGTGCATATG...........................................................................................................................................................................................................................2280.1310100000000
...................................................................................................................AAT----------ACAATCATGTGCATATGA..........................................................................................................................................................................................................................2180.1310100000000
.......GTGCAGTTGCGGGCTTTAGCTATAC............................................................................................................................................................................................................................................................................................................................................2580.1310100000000
.................................................................................................................GCAAT----------ACAATCATGTGCATATGT..........................................................................................................................................................................................................................2380.1310100000000
...................................................................................................................AAT----------ACAATCATGTGCATATGAAT........................................................................................................................................................................................................................2380.1310010000000
........TGCAGTTGCGGGCTTTAGCTATAC............................................................................................................................................................................................................................................................................................................................................2480.1310100000000
.................................................................................................................GCAAT----------ACAATCATGTGCATATGAAT........................................................................................................................................................................................................................2580.1310100000000
................................................................................................................TGCAAT----------ACAATCATGTGCATATGAATA.......................................................................................................................................................................................................................2780.1310100000000
.ATGCGTGTGCAGTTGCGGGCTTTA...................................................................................................................................................................................................................................................................................................................................................2490.1110100000000
TATGCGTGTGCAGTTGCG..........................................................................................................................................................................................................................................................................................................................................................1890.1110100000000
TATGCGTGTGCAGTTGCGGGC.......................................................................................................................................................................................................................................................................................................................................................2190.1110100000000
.ATGCGTGTGCAGTTGCGG.........................................................................................................................................................................................................................................................................................................................................................1890.1110100000000
.............................................ACAGCTATGTTTTGGACACAA..........................................................................................................................................................................................................................................................................................................21180.1120200000000
.ATGCGTGTGCAGTTGCGGGC.......................................................................................................................................................................................................................................................................................................................................................2090.1110100000000
..TGCGTGTGCAGTTGCGGGCTTTAGCTAT..............................................................................................................................................................................................................................................................................................................................................2890.1110000000100
TATGCGTGTGCAGTTGCGGGCT......................................................................................................................................................................................................................................................................................................................................................2290.1110100000000
......TGTGCAGTTGCGGGCTTTA...................................................................................................................................................................................................................................................................................................................................................19100.1010000100000
...........................................TTACAGCTATGTTTTGGACAC............................................................................................................................................................................................................................................................................................................21200.1020200000000
.....................................................................................................................T----------ACAATCATGTGCATATGAATAGGG-...................................................................................................................................................................................................................25100.1010100000000
.....................................................................................................................T----------ACAATCATGTGCATATGAATAGG.....................................................................................................................................................................................................................24100.1010100000000
......TGTGCAGTTGCGGGCTTTAGC.................................................................................................................................................................................................................................................................................................................................................21100.1010000000010
....................................................................................................................AT----------ACAATCATGTGCATATGAATAGGG-C..................................................................................................................................................................................................................27100.1010100000000
....................................................................................................................AT----------ACAATCATGTGCATATGAATAGG.....................................................................................................................................................................................................................25100.1010100000000
................................................................................................................................ACAATCATGTGCATATGAATAGG.....................................................................................................................................................................................................................23100.1010100000000
......TGTGCAGTTGCGGGCTTTAG..................................................................................................................................................................................................................................................................................................................................................20100.1010100000000
........TGCAGTTGCGGGCTTTAGCTAC..............................................................................................................................................................................................................................................................................................................................................22100.1010000100000
................................................................................................................................ACAATCATGTGCATATGAATAGGG-C..................................................................................................................................................................................................................25100.1010100000000
........TGCAGTTGCGGGCTTTAGCTATA.............................................................................................................................................................................................................................................................................................................................................23100.1010100000000
............................................................................................................................................................................................................C------------------------ATTGAACTA--------AAACTACG..............................................................................................................18100.1010100000000
........TGCAGTTGCGGGCTTTAGCTAT..............................................................................................................................................................................................................................................................................................................................................22100.1010100000000
..........................................ATTACAGCTATGTTTTGGACACAAG.........................................................................................................................................................................................................................................................................................................25110.0910000000010
....CGTGTGCAGTTGCGGGCTT.....................................................................................................................................................................................................................................................................................................................................................19110.0910100000000
....................................................................................................................................TCATGTGCATATGAATAGGG-A..................................................................................................................................................................................................................21110.0910100000000
..........................................ATTACAGCTATGTTTTGGACACAAGCAA......................................................................................................................................................................................................................................................................................................28110.0910000000010
TATGCGTGTGCAGTTGCGGGCTTTAA..................................................................................................................................................................................................................................................................................................................................................26110.0910100000000
...........................................TTACAGCTATGTTTTGGACACAAGCAA......................................................................................................................................................................................................................................................................................................27130.0810100000000
.............................................ACAGCTATGTTTTGGACACAAGT........................................................................................................................................................................................................................................................................................................23140.0710100000000
................................................GCTATGTTTTGGACACAAG.........................................................................................................................................................................................................................................................................................................19150.0710100000000
.................................................CTATGTTTTGGACACAAGCAA......................................................................................................................................................................................................................................................................................................21150.0710100000000
...........................................TTACAGCTATGTTTTGGACACA...........................................................................................................................................................................................................................................................................................................22170.0610100000000
.............................................ACAGCTATGTTTTGGACACAAGCAAA.....................................................................................................................................................................................................................................................................................................26200.0510100000000
....................................................................................................TACTTAAGC-GGTGCAAT----------ACAATC......................................................................................................................................................................................................................................23200.0510100000000
...............GCGGGCTTTAGCTATACG...........................................................................................................................................................................................................................................................................................................................................18200.0510000000100
....................................................................................................TACTTAAGC-GGTGCAAT----------ACA.........................................................................................................................................................................................................................................20200.0510100000000
.............................................ACAGCTATGTTTTGGACAC............................................................................................................................................................................................................................................................................................................19200.0510100000000
droWil2
GGA-----------------------------------------------------------------------------------------------------------GGTACAATCGTTGCGTTCACAAACAAATGCATACGTAAAGAA-CAATA--GAAA------ATATACAGTGGTTCGATTACA--------T-GAAT------------------------ATTGACTTAAA--CTATAT-AAAGTCGTTCAATTTCCAAACATACCAACCGCCCTGAACGATCGTTCAGAATAACGGTA----GAACGGCCACCTTTACAATTGGGCGCTTGG------------------GCACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................................................................................................................................................................................................................TTCAGAATAACGGTA----GAACGGCCACCT........................................2754.2021111090
...........................................................................................................................................................................................................................................................................................TGAACGATCGTTCAGAATAACGGT.........................................................2473.5725221200
............................................................................................................................................................................................................................................................................................................TAACGGTA----GAACGGCCACCTTTACAAT.................................2753.4017115010
................................................................................................................................................................................................................................................................TTCAATTTCCAAACATACCAACCGCCC.................................................................................2713.00303000
.....................................................................................................................................................................................................................................................................................................TTCAGAATAACGGTA----GAACGGCCACCTT.......................................2852.201105150
............................................................................................................................................................................................................................................................................................................TAACGGTA----GAACGGCCACCTTTACA...................................2551.00505000
......................................................................................................................................................................................................................................................................TTCCAAACATACCAACCGCCCTGAACGA..........................................................................2811.00101000
.................................................................................................................................................................................................................................................................TCAATTTCCAAACATACCAACCGCCC.................................................................................2611.00101000
..............................................................................................................................TCACAAACAAATGCATACGTAAAGAA-CAA................................................................................................................................................................................................................2970.86606000
.....................................................................................................................................................................................................................................................................................................TTCAGAATAACGGTA----GAACGGCCACC.........................................2650.60303000
......................................................................................................................................................................................................................................................................................................TCAGAATAACGGTA----GAACGGCCACCTT.......................................2750.60303000
............................................................................................................................................................................................................................................................................................................TAACGGTA----GAACGGCCACCTTTACAA..................................2650.60303000
...........................................................................................................................................................................................................................................................................................TGAACGATCGTTCAGAATAACGGTA----....................................................2570.57404000
..................................................................................................................................................................................................................................................................................................................TA----GAACGGCCACCTTTACAATTGGGC............................2650.40201010
.............................................................................................................................................................................................................................................................................................................AACGGTA----GAACGGCCACCTTTACA...................................2450.40202000
.......................................................................................................................................................................................................................................................................................................CAGAATAACGGTA----GAACGGCCACCTT.......................................2650.40202000
........................................................................................................................................................................................................................................................................................................AGAATAACGGTA----GAACGGCCACCTT.......................................2550.40202000
............................................................................................................................................................................................................................................................................................................TAACGGTA----GAACGGCCACCTTTAC....................................2450.40201010
.................................................................................................................................................TAAAGAA-CAATA--GAAA------ATATACAGTGGT......................................................................................................................................................................................28110.36403010
...........................................................................................................................................................................TATACAGTGGTTCGATTACA--------T-GAAT------------------------.......................................................................................................................................2560.33200020
.......................................................................................................................................................................................................................................................................................GCCCTGAACGATCGTTCAGAATAACGG..........................................................2760.33202000
.................................................................................................................ACAATCGTTGCGTTCACAAACAAATG.................................................................................................................................................................................................................................2630.33101000
...........................................................................................................................................................................................................................................................................................TGAACGATCGTTCAGAATAACGGTA----G...................................................2670.29202000
............................................................................................................................................................TA--GAAA------ATATACAGTGGTTCGATTAC..............................................................................................................................................................................2670.29201010
...........................................................................................................................................................................................................................................................................................................ATAACGGTA----GAACGGCCACCT........................................2150.20101000
.............................................................................................................................................................................................................................................................................................................AACGGTA----GAACGGCCACCTTTACAA..................................2550.20101000
.....................................................................................................................................................................................................................................................................................................TTCAGAATAACGGTA----GAACGGCCAT..........................................2550.20100010
.............................................................................................................................................................................................................................................................................................................AACGGTA----GAACGGCCACCTT.......................................2050.20101000
.....................................................................................................................................................................................................................................................................................................TTCAGAATAACGGTA----GAACGGCC............................................2350.20100010
......................................................................................................................................................................................................................................................................................................TCAGAATAACGGTA----GAACGGCCACCT........................................2650.20101000
.....................................................................................................................................................................................................................................................................................................TTCAGAATAACGGTA----GAACGGCCA...........................................2450.20101000
........................................................................................................................................................................................................................................................................................................................GAACGGCCACCTTTACAATTG...............................2150.20101000
..............................................................................................................................................................................................................................................................................................................ACGGTA----GAACGGCCACCTTTACAATTG...............................2750.20101000
......................................................................................................................................................................................................................................................................................................TCAGAATAACGGTA----GAACGGCCACC.........................................2550.20101000
............................................................................................................................................................................................................................................................................................................TAACGGTA----GAACGGCCACCTT.......................................2150.20101000
...................................................................................................................................................................................................................................................................................................CGTTCAGAATAACGGTA----GAACGGC.............................................2450.20100010
...............................................................................................................................................................................................................................................................................................CGATCGTTCAGAATAACGGTA----GAACG...............................................2660.17101000
............................................................................................................................................................................................................................................................................................GAACGATCGTTCAGAATAACGGTA----GAAC................................................2860.17101000
.....................................................................................................................................................GAA-CAATA--GAAA------ATATACAGTGGTT.....................................................................................................................................................................................25130.15201010
.........................................................................................................................................TGCATACGTAAAGAA-CAATA--GAAA------ATA...............................................................................................................................................................................................2770.14101000
............................................................................................................................................................TA--GAAA------ATATACAGTGGTTCGATTACA--------.....................................................................................................................................................................2770.14100010
..................................................................................................................................................................AA------ATATACAGTGGTTCGATTACA--------T-G..................................................................................................................................................................2570.14100010
............................................................................................................................................................................................................................................................................................GAACGATCGTTCAGAATAACGGTA----....................................................2470.14101000
.....................................................................................................................................CAAATGCATACGTAAAGAA-CAATA--G...........................................................................................................................................................................................................2580.13101000
..................................................................................................................................AAACAAATGCATACGTAAAGAA-CAA................................................................................................................................................................................................................2580.13101000
.....................................................................................................................................CAAATGCATACGTAAAGAA-CAATA--GAAA------A.................................................................................................................................................................................................2980.13101000
................................................................................................................................ACAAACAAATGCATACGTAAAGAA-CAA................................................................................................................................................................................................................2780.13101000
................................................................................................................................................GTAAAGAA-CAATA--GAAA------ATATACAGTG........................................................................................................................................................................................27110.09101000
...................................................................................................................................................AAGAA-CAATA--GAAA------ATATACAGTGG.......................................................................................................................................................................................25130.08101000
....................................................................................................................................................AGAA-CAATA--GAAA------ATATACAGTGGT......................................................................................................................................................................................25130.08100010
..........................................................................................................................................................AATA--GAAA------ATATACAGTGG.......................................................................................................................................................................................19150.07101000
droAna3
AT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TG--------CAATTTCGG-------CTATGCGTGTGAGC---TTAAAGCTCCCA----AATGGT-----AAACAAGACAATGATGTGCGCAAAAATAGGTACGATAA---------------------------------------------------------------------------------TAAGAAATTAATTAACAAGTAAAGAAGCAAATGTAATACTATTTA----AATGCAAAAT-AAAGACGAACTATTTCTCAACATACCGGCCCCCCTGAACGACGGTTCAGTTCAAAGGAA----GCACAGCTATTTTCGTAAT---------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
GCTG------CATTTTCGG-------CTATGCATGTGAGC---TTTAAGCTTTCA----TAAAGT-----AAACAATACAGTGATGCGCAATTAACTAGGTGCAATTA---------------------------------------------------------------------------------TATGAAATTAA-GAACAAGTAAAGAAGCAA-----------------------TGA-AA-ATGACCTATCTATTTCTCAACATACCGGCCCCCCTAAACGACTGTTCAGTTCAAAGGAA----GCACAGCAATTTTCGTAATAGACCGCTTGTAGGTTCCTCTAGCGGTTTTCACSizeHit CountTotal NormTotal
No Reads
droEle1
AATGTG-------------------------CTCGCGTGT---GTAGG--------------------------------------------------------------GATATAAT----------ACAA------------------------TT--ATAA-------TATAC---------------------TAT-AAACA---------------------------AATTA--------AATGTATAGGA---TGTCCGCTTCTTACCGGCCCTCCCGAACAGTTGTTCAGCAAAGGGGTA----AGACTGCCATTTTGGTTATTGGAC----------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
G----------------------------TGCGTGTGAGC---TTAAAGCTTTTA----TGTAGA-----AAACAAAACAATGATGTGCATTTAAATAGGTGCGATTAG-AAAACAAA----------ACAATGATGAGTGTTTAACTAGGAGCGGTTA--------------TATG----------------------C-AGA--------------------------------------TATTAA-ATGACCGATCTATTTCTCAACATACTGGCCCCCATGAACGACGGTTCAGTTCAAAGGAA----GCACAGAAATGTTCGTAATGGGCCGCTGGTAGATTCCTCTGGCAGTATTAACSizeHit CountTotal NormTotal
No Reads
droBia1
TG--------CAATTTCGG-------CTATGCGCGTGAGC---TTAAAGCTCCCA----AATGGT------TACAATACAATGATGTGCGCAAAAATAGGTACTATAGG-TAA--------------------------------------------------TAGGTAAAAATA---------GGTTATAGGTAAATAG-GCAAAAGTAAAGAAGCAAATGTAATACTATTTA----AATTCAACAT-AAAGACGAACTATTTCCCAACATACCGGCCCCCCTGAACGACGGTTCAGTTCAAAGGAA----GCACAGC---------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
AA-----------------------------------------------------------------------CAATACAATGATGAGCATATAACTAGGTGCGATTAG-GAAACAAT----------ACAATGATGAGCATTTAACTAGGTGCGATTAGGAAA------CAATACA------------------ATGAT-GAGC------------------------ATTTAACAA----TAATAA-AATACCGATCTATTTCACAACATACCGGCCCCCCTGAACGACGGTTCAGTTCAAAGGAA----GCACGGCAATTTTCGTAAT---------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
TAC-----TGCAATTTCGG-------GTATGCGTGTGAAC---TTAAAGCTTTGA----TACACA-----ATACAAAACAATAATGTGCATTTAACTAACTACGATTAGAAAAACAAT----------ACAATGATCAGCATTTAACTAAGTGCGATTT--------------CACA----------------------A-T------------------------------------AA--TGATAA-ATGATCGATCTATTCTTTAACATACCGGCC--CCTGAACGACGGTGCAGTTCAAAGGAA----GCACAGCAATTTTCGTAAT---------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCCAAACATACCGGCCCCCCTGAACGGTTGTTCAGCAGAGAGGCA----GTACAGCGATTTTGGCAATTGGGCGTTTGTATAATCCGTGAGCAGTCTTCACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................................................................................................................................................ATAATCCGTGAGCAGTCTTCA.211645.88734000000000000000000000001001000000000000000000001000000001700000000000000000000000000000002000000000000000051500000000000000000000000000000000000000000100000000000118718120000000000000000114605800000000000000000000040008137100001000001112000000070030100010000000010000000020000001100140500000000000000000020058210050310510191602000000101941516140
...............................................................................................................................................................................................................................................................................................................................................CGTTTGTATAATCCGTGAGCAGTC.....241538.4057600000000000000000000000300000000000000001060000003200110000100000000000000000000000000000000000000000000000000000000000000000000000600018040010418041123631317030000000000000000000000000000000001014000000200002010000000000107301230247701211000000000000000000000000000000000000000000000000000000000000000005152100000025055000000000000000010000000
...........................................................................................................................................................................................................................................................................................................................CAGCGATTTTGGCAATTGGGC............................211735.9461100000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000043000000000000000000000000000000000000000000000000000000804000000000000000002100020000000000000000000000000011101000500020353257100000050040100010311101033201100300052100000000750000000000000000200001330100152831127401000000002385814260
.................................................................................................................................................................................................................................................................................................................................TTTTGGCAATTGGGCGTTTGT......................211632.195150000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000100000000000000000150741041000000000000001450110000000000000000001000000012101000601010514101113130000003000000001010200004100100400141001000012210000000000000000000003840014067000740000000000148190
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droSim2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACATACCGGACCCCCTGAACGGACGTTGACCATAGGGGCA----GTACAGCCACTATAGCAATTGGG------------------GCAGTCTTCACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................................................................................................................................CCGGACCCCCTGAACGGACGTTGA...................................................................2412.00200000000000020000
...........................................................................................................................................................................................................................................................................................TGAACGGACGTTGACCATAGGGGCA----G...................................................2611.00100000000000010000
...............................................................................................................................................................................................................................................................................TACCGGACCCCCTGAACGGACGTTGAC..................................................................2711.00100000000000010000
...............................................................................................................................................................................................................................................................................TACCGGACCCCCTGAACGGACGTTGAA..................................................................2711.00100000000000010000
...............................................................................................................................................................................................................................................................................TACCGGACCCCCTGAACGGACGT......................................................................2311.00100000000000010000
droSec2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCCAAACATACCGGCCCCACTGAACGGTTGTTCACCAGAGAGGCA----GTACAGCGATTTTGGCAAT---------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................................................................................................................................................................................................................................................TTCACCAGAGAGGCA----GTACAGCGAT..........................................2530.3310010
droYak3
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCCGAACATACCGGCCGCCCTGAACGATTGTTCAGCACAGAGGCA----GCGCAGT-------GCAATAGGGCGTTTATAAAA------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
AAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGA----------------------T-GAAG------------------------AGTGGA--A--------AAACAGGGTGTCTTGTTCCCAAACATACCGGTCCCCCTGAACGTTTGTTCTGCATAAGGGCA----ATATTGCGTTTTGGGC------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 06/08/2015 at 03:57 PM