ID:

dpe_1236

 Coordinate:

scaffold_243:21379-21529 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.8 -23.6 -23.2

Flybase annnotation

CDS [Dper\GL15750-cds]; exon [dper_GLEANR_17134:2]; intron [Dper\GL15750-in]

Repeatable elements

NameClassFamilyStrand
Baggins1LINELOA-
mature
  1. scaffold_965:332-358 -
  2. dpe_1236  scaffold_243:21452-21478 -
  3. scaffold_158:4230-4256 -
  4. scaffold_91:6441-6467 -
  5. scaffold_26:823686-823712 -
  6. scaffold_59:16906-16932 -
  7. scaffold_141:65589-65615 -
  8. scaffold_991:3677-3703 -
  9. scaffold_152:19809-19835 -
  10. scaffold_152:80199-80225 -
  11. scaffold_109:176505-176531 -
  12. scaffold_148:8556-8582 -
  13. scaffold_636:10505-10531 -
  14. scaffold_2133:1434-1460 -
  15. scaffold_1110:5355-5381 -
  16. scaffold_1600:4058-4084 -
  17. scaffold_1705:3960-3986 -
  18. scaffold_4728:2018-2044 -
  19. scaffold_390:7021-7047 -
  20. scaffold_8326:122-148 -
star
  1. scaffold_965:389-408 -
  2. dpe_1236  scaffold_243:21509-21528 -
  3. dpe_2406  scaffold_158:4287-4306 -
  4. scaffold_386:293-312 -
  5. dpe_2081  scaffold_77:45835-45854 -
  6. scaffold_91:38-57 -
  7. scaffold_91:55185-55204 -
  8. scaffold_26:823743-823762 -
  9. scaffold_141:65646-65665 -
  10. dpe_2476  scaffold_991:3734-3753 -
  11. scaffold_109:176562-176581 -
  12. scaffold_148:8613-8632 -
  13. scaffold_636:10562-10581 -
  14. scaffold_102:135570-135589 -
  15. scaffold_1110:5412-5431 -
  16. scaffold_1600:4115-4134 -
  17. scaffold_1705:4017-4036 -
  18. scaffold_2503:422-441 -
  19. scaffold_8326:179-198 -
  20. scaffold_8786:720-739 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CATGGCTTCCCCTGGATCCAAGGCGACTGTGCTTCTCGCCATGGATACAGGTGGGCACGAGCGAACCGGCACCCGCCGTAACTGTACACATCGGCGGAAGTGCGACTATACTCTCCCCGTGAGGGCGGCTGGAAACAGGTCCTGGTACGGTCTCTGACAGGATGCTGGTTAATTGTAGTCGGGCGGAGAGAAGAAAACTTTCCGTGAAATAACCCCAATCCAAGGTGACACTGTCATATGCTTAGGGATCC
***************************************************.....................(((((..............(((.(((((((......)))).))))))....)))))*************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V111
male body		 V057
head
.............................TGCTTCTCGCCATGGATACAGGTGGGCA.................................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0
.....................................GACATGGATACAGGTGGT.................................................................................................................................................................................................... 18 2 5 0.80 4 0 4 0
......................................................................................CTCATCGGCGGGAGTGCGTCT................................................................................................................................................ 21 3 2 0.50 1 0 0 1
.......................................CATGGATACAGGTGGTGC.................................................................................................................................................................................................. 18 3 20 0.25 5 5 0 0
.....................................................................................................GCGACTATACTCTCCCCGTGAGGGCGG........................................................................................................................... 27 0 20 0.25 5 5 0 0
..........................................................................................................................................................................................................................TCCAAGGTGACACTGTCATATG........... 22 0 20 0.25 5 5 0 0
...........................................................................................................................................................................................................................CCAAGGTGACACTGTCATATGC.......... 22 0 20 0.05 1 1 0 0
.............................................................................................................................................................................TGTAGTCGGGCGGAGAGAAGAAAAA..................................................... 25 1 20 0.05 1 1 0 0
...................................................TGGGCACGAGCGAACCGGCA.................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0
............................................................................................................................................................................................................TGAAATAAGCCCAATCCAAGGTGACAC.................... 27 1 20 0.05 1 1 0 0
............TGGATCCAAGGCGACTGTG............................................................................................................................................................................................................................ 19 0 20 0.05 1 1 0 0
...........................................................AGCGAACCGGCACCCGCCGTA........................................................................................................................................................................... 21 0 20 0.05 1 1 0 0
..........................................................................................................................................................................................................................TCCAAGGTAACACTGTCATATGC.......... 23 1 20 0.05 1 1 0 0
...................................................TGGGCACGAGCGAACCGGCACCC................................................................................................................................................................................. 23 0 20 0.05 1 1 0 0
.............................................TACAGGTGGGCACGAGCG............................................................................................................................................................................................ 18 0 20 0.05 1 1 0 0
.............................................................................................................................................................................TGTAGTCGGGCGGAGAGAAGAAA....................................................... 23 0 20 0.05 1 1 0 0
...........................................................AGCGAACCGGCACCCGCCGTAACT........................................................................................................................................................................ 24 0 20 0.05 1 1 0 0
............................................................................................................TACTCTCCCCGTGAGGGCGGCTGG....................................................................................................................... 24 0 20 0.05 1 1 0 0
...........................................................................................................................................................................ATTGTAGTCGGGCGGAGAG............................................................. 19 0 20 0.05 1 1 0 0
...........................................................AGCGAACCGGCACCCGCCGTAACTG....................................................................................................................................................................... 25 0 20 0.05 1 1 0 0
....................................................................................................TGCGACTAAACTCTCCCCGTGAGGGCG............................................................................................................................ 27 1 20 0.05 1 1 0 0
...........................................................................................CGGCGGAAGTGCGACTATACTA.......................................................................................................................................... 22 1 20 0.05 1 1 0 0
.....................................................................................................GCGACTATACTCTCCCCGTGAGGGC............................................................................................................................. 25 0 20 0.05 1 1 0 0
....................................................................................................TGCGACTAGACTCTCCCCGT................................................................................................................................... 20 1 20 0.05 1 1 0 0
.............................................TACAGGTGGGCACGAGCGAACCGGC..................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0

Anti-sense strand reads

GTACCGAAGGGGACCTAGGTTCCGCTGACACGAAGAGCGGTACCTATGTCCACCCGTGCTCGCTTGGCCGTGGGCGGCATTGACATGTGTAGCCGCCTTCACGCTGATATGAGAGGGGCACTCCCGCCGACCTTTGTCCAGGACCATGCCAGAGACTGTCCTACGACCAATTAACATCAGCCCGCCTCTCTTCTTTTGAAAGGCACTTTATTGGGGTTAGGTTCCACTGTGACAGTATACGAATCCCTAGG
***************************************************************************************************************************.....................(((((..............(((.(((((((......)))).))))))....)))))*************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V042
embryo
 V057
head
 V050
head
 M021
embryo
 V111
male body
....................................................................................................................................................................................................................GGGGTTAGGTTCCACTGTGACAG................ 23 0 20 17.40 348 348 0 0 0 0 0
.....................................................................................................................................................................................................................GGGTTAGGTTCCACTGTGACAG................ 22 0 20 10.60 212 204 8 0 0 0 0
.........................................................................................................................................................................................................GGCACTTTATTGGGGTTAGGTTCCACT....................... 27 0 1 8.00 8 7 0 0 1 0 0
...................................................................................................................................................................................................................TGGGGTTAGGTTCCACTGTGACAG................ 24 0 20 4.75 95 95 0 0 0 0 0
............................................................................................................................................................................................................ACTTTATTGGGGTTAGGTTCCACT....................... 24 0 20 4.30 86 86 0 0 0 0 0
......................................................................................................................................................................CCAATTAACATCAGCCCGCCTCTCTT........................................................... 26 0 1 3.00 3 3 0 0 0 0 0
.....................................................................................................................................................................ACCAATTAACATCAGCCCGCCTCTCTT........................................................... 27 0 1 2.00 2 2 0 0 0 0 0
.........................................................................................................................................CCAGGACCATGCCAGAGACTGTCCT......................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0
......................................................................................GTGTAGCCGCCTTCACGCTGATAT............................................................................................................................................. 24 0 1 2.00 2 2 0 0 0 0 0
...........................................................................................................................................................................................................CACTTTATTGGGGTTAGGTTCCAC........................ 24 0 20 1.50 30 30 0 0 0 0 0
.............................................................................................................................................................................................................CTTTATTGGGGTTAGGTTCCACT....................... 23 0 20 1.05 21 21 0 0 0 0 0
.....................................................................................................................................................................................................GAAAGGCACTTTATTGGGGT.................................. 20 0 1 1.00 1 1 0 0 0 0 0
......................................................................................................................................TGTCCAGGACCATGCCAGAGACTGT............................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0
.................................................................................GACATGTGTAGCCGCCTTCACGCTGATAT............................................................................................................................................. 29 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................TTGTCCAGGACCATGCCAGAGAC............................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................TTGTCCAGGACCATGCCAGAGACTG............................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................GTTAGGTTCCACTGTGACAG................ 20 0 20 0.85 17 16 1 0 0 0 0
.............................................ATGTCCACCCGTGCTCGCTTGGCC...................................................................................................................................................................................... 24 0 20 0.85 17 17 0 0 0 0 0
.....................CCGCTGTCACAAAGAGCGT................................................................................................................................................................................................................... 19 3 16 0.75 12 10 0 2 0 0 0
...............................................................................................................................................................................................................TTATTGGGGTTAGGTTCCACT....................... 21 0 20 0.75 15 14 1 0 0 0 0
....................GCCGCTGTCACAAAGAGCG.................................................................................................................................................................................................................... 19 3 20 0.70 14 13 0 0 0 0 1
..................................................................................................................................................................................................................TTGGGGTTAGGTTCCACTGTGACAG................ 25 0 20 0.65 13 12 0 0 0 0 1
...........................................................................................................................................................................................................CACTTTATTGGGGTTAGGTTCCACT....................... 25 0 20 0.60 12 0 8 0 0 4 0
.......................................................................................................................................................................................................AAAAAACTTTATTGGGGTTAGGTTCCACT....................... 29 3 2 0.50 1 1 0 0 0 0 0
.....................CCGCTGTCACAAAGAGCG.................................................................................................................................................................................................................... 18 2 6 0.50 3 2 0 1 0 0 0
...........................................................................................................................................................................................................AACTTTATTGGGGTTAGGTTCCACT....................... 25 1 20 0.45 9 9 0 0 0 0 0
...................................................................................................................................................................................................................TGGGGTTAGGTTCCACTGTGACA................. 23 0 20 0.45 9 9 0 0 0 0 0
.................................................................................................................................................................................................................ATTGGGGTTAGGTTCCACTGTGACAG................ 26 0 20 0.40 8 7 1 0 0 0 0
.....................................................................................................................GCACTCCCGCCGACCTTTGT.................................................................................................................. 20 0 20 0.35 7 7 0 0 0 0 0
.....................TCGCTGACACTGAGAGCGGT.................................................................................................................................................................................................................. 20 3 3 0.33 1 0 0 1 0 0 0
.....................CCGCTGTCACAAAGAGCGGGA................................................................................................................................................................................................................. 21 3 3 0.33 1 0 0 1 0 0 0
...............................................GTCCACCCGTGCTCGCTTGGCC...................................................................................................................................................................................... 22 0 20 0.30 6 6 0 0 0 0 0
.....................................................................................................................................................................................................................GGGTTAGGTTCCAGTGTGACAG................ 22 1 20 0.30 6 6 0 0 0 0 0
.............................................ATGTCCACCCGTGCTCGCTTGGCCG..................................................................................................................................................................................... 25 0 20 0.25 5 5 0 0 0 0 0
...............................................GTCCACCCGTGCTCGCTTGGCCGT.................................................................................................................................................................................... 24 0 20 0.25 5 5 0 0 0 0 0
.....................................................................................................................................................................................................................GGGTTAGGTTCCAATGTGACAG................ 22 1 20 0.25 5 5 0 0 0 0 0
......................................................................................................................................................................................................................GGTTAGGTTCCAATGTGACAG................ 21 1 20 0.25 5 5 0 0 0 0 0
...............................................................................................................AGAGGGGCACTCCCGCCGACCT...................................................................................................................... 22 0 20 0.20 4 0 4 0 0 0 0
......................................................CGTGCTCGCTTGGCCGTGGGCGGCA............................................................................................................................................................................ 25 0 20 0.20 4 4 0 0 0 0 0
............................................................................................CCGCCTTCACGCTGATAT............................................................................................................................................. 18 0 20 0.20 4 1 0 0 0 3 0
.......................................................GTGCTCGCTTGGCCGTGGGCGGCAT........................................................................................................................................................................... 25 0 20 0.20 4 4 0 0 0 0 0
.....................CCGCTGTCACAAAGAGCGGG.................................................................................................................................................................................................................. 20 3 6 0.17 1 0 0 1 0 0 0
....................................................................................................................................................................................................................GGGGTTAGGTTCCACTGTGAC.................. 21 0 20 0.15 3 3 0 0 0 0 0
...............................................................................................................................................................................................................TTATTGGGGTTAGGTTCCACTGT..................... 23 0 20 0.15 3 3 0 0 0 0 0
....................................................................................................................................................................................................................GGGGTTAGGTTCCACTGTGACAGTAT............. 26 0 20 0.15 3 3 0 0 0 0 0
...............................................GTCCACCCGTGCTCGCTT.......................................................................................................................................................................................... 18 0 20 0.15 3 2 0 0 0 1 0
.......................................................................................................................................................................................................AAGTCACTTTATTGGGGTTAGGTTCCACT....................... 29 1 20 0.15 3 1 0 0 0 2 0
..................................................................................................................................................................................................................TTGGGGTTAGGTTCCACT....................... 18 0 20 0.15 3 3 0 0 0 0 0
....................................................................................................................................................................................................................GGGGTTAGGTTCCAATGTGACAG................ 23 1 20 0.15 3 3 0 0 0 0 0
.......................................................................................................................................................................................................................GTTAGGTTCCACTGTGACAGTAT............. 23 0 20 0.15 3 3 0 0 0 0 0
......................................................CGTGCTCGCTTGGCCGTGGGC................................................................................................................................................................................ 21 0 20 0.10 2 2 0 0 0 0 0
................................................................................................................................................................................................................TATTGGGGTTAGGTTCCACTGTGACAG................ 27 0 20 0.10 2 2 0 0 0 0 0
....................................................CCCGTGCTCGCTTGGCCGT.................................................................................................................................................................................... 19 0 20 0.10 2 2 0 0 0 0 0
................................................TCCACCCGTGCTCGCTTGGCCGT.................................................................................................................................................................................... 23 0 20 0.10 2 2 0 0 0 0 0
............................................................................................................................................................................................................ACTTTATTGGGGTTAGGTTCCAC........................ 23 0 20 0.10 2 2 0 0 0 0 0
..........................................CCTATGTCCACCCGTGCTCGCTT.......................................................................................................................................................................................... 23 0 20 0.10 2 2 0 0 0 0 0
.............................................................................................................................................................................................................CTTTATTGGGGTTAGGTTCCAC........................ 22 0 20 0.10 2 2 0 0 0 0 0
..........................................................................................TGCCGCCTTCACGCTGATAT............................................................................................................................................. 20 1 20 0.10 2 2 0 0 0 0 0
..............................................TGTCCACCCGTGCTCGCTTGGCC...................................................................................................................................................................................... 23 0 20 0.10 2 2 0 0 0 0 0
.................................................CCACCCGTGCTCGCTTGGCCGT.................................................................................................................................................................................... 22 0 20 0.10 2 2 0 0 0 0 0
....................................................................................................................................................................................................................CGGGTTAGGTTCCACTGTGACAGTAT............. 26 1 20 0.10 2 0 0 0 0 2 0
......................................................................................................................................................................CCTATTAACATCAGCCCGCCTCTCTT........................................................... 26 1 20 0.10 2 2 0 0 0 0 0
.............................................................................................................................................................................................CTTGTTTCGAAAGGCACGTT.......................................... 20 3 10 0.10 1 1 0 0 0 0 0
...............................................................................................................AGAGGGGCACTCCCGCCGACCTTTGT.................................................................................................................. 26 0 20 0.10 2 0 1 0 0 0 1
.....................................................CCGTGCTCGCTTGGCCGTGGGC................................................................................................................................................................................ 22 0 20 0.10 2 1 0 0 0 1 0
..............................................................................................................................................................................................................TTTATTGGGGTTAGGTTCCAC........................ 21 0 20 0.10 2 2 0 0 0 0 0
.............................ACGAAGAGCGGAATCGATG........................................................................................................................................................................................................... 19 3 18 0.06 1 0 0 1 0 0 0
.............................................ATGTCCACCCGTGCTCGCTTGGCCGT.................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................................................................AATAACATCAGCCCGCCTCTCT............................................................ 22 1 20 0.05 1 1 0 0 0 0 0
......................................................CGTGCTTGCTTGGCCGTGGGCGGCAT........................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0
.........................................................GCTCGCTTGGCCGTGGGCGGCAT........................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0
...................................................ACCCGTGCTCGCTTGGCC...................................................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0 0
.........GGGACCTAGGTTCCGCTGACACG........................................................................................................................................................................................................................... 23 0 20 0.05 1 0 1 0 0 0 0
...........................................................................................................................................................................................................TACTTTATTGGGGTTAGGTTCCACT....................... 25 1 20 0.05 1 1 0 0 0 0 0
..........................................................ATCGCTTGGCCGTGGGCGGCAT........................................................................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................................................TTAACATCAGCCCGCCTCTCTTCT......................................................... 24 0 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................................................................................GGGGTTAGGTTCCACTGT..................... 18 0 20 0.05 1 1 0 0 0 0 0
............................................................................................................................................................................................................GCTTTATTGGGGTTAGGTTCCACT....................... 24 1 20 0.05 1 1 0 0 0 0 0
..........................................CCTATGTCCACCCGTGCTCGCT........................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................................................................................GGGGTTAGGTTCCACTGTGACAGTATA............ 27 0 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................GGGTTAGGTTCCACAGTGACAGC............... 23 2 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................................................................................TTAGGTTCCACTGTGACAG................ 19 0 20 0.05 1 0 1 0 0 0 0
..................................................................................................................................................................................AGCCCGCCTCTCTTCTTTTG..................................................... 20 0 20 0.05 1 0 0 0 0 1 0
..........................................................CTCGCTTGCCCGTGGGCGGCA............................................................................................................................................................................ 21 1 20 0.05 1 0 1 0 0 0 0
................................................TCCACCCGTGCTCGCTTGGCC...................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0
............................................AATGTCCACCCGTGCTCGCTTGGCC...................................................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................................................................................................GGTTAGGTTCCATTGTGACAG................ 21 1 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................................................................CACTTTATTGGGGTTAGGTTCCACTA...................... 26 1 20 0.05 1 1 0 0 0 0 0
............................................................................................................................................................................................................ACTTTATTGGGGTTATGTTCCACT....................... 24 1 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................................................................................................ATTGGGGTTAGGTTCCAGTGTGACAG................ 26 1 20 0.05 1 1 0 0 0 0 0
.....................................................................................................CGCTGATATGAGAGGGGCACTCCC.............................................................................................................................. 24 0 20 0.05 1 1 0 0 0 0 0
....................................................CCCGTGCTCGCTTGGCCGTGGGC................................................................................................................................................................................ 23 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................................................................CACTTTATTGGGGTTAGGTTCCACTTT..................... 27 1 20 0.05 1 1 0 0 0 0 0
...............................................GTCCACCCGTGCTCGCTTGGCCGTG................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................................................................CACTTTATTGGGGTTAGGCTCCACT....................... 25 1 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................................................................................................ATTGGGGTTAGGTTCCACT....................... 19 0 20 0.05 1 0 1 0 0 0 0
.........GGGACCTAGGTTCCGCTGACACGA.......................................................................................................................................................................................................................... 24 0 20 0.05 1 0 1 0 0 0 0
...................................................................................................................................................................................................................CAGGGTTAGGTTCCACTGTGACAG................ 24 2 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................................................................................................TTATTGGGGTTAGGTTCCACTGTGACAG................ 28 0 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................AATTTGTCCAGGACCATGC...................................................................................................... 19 2 20 0.05 1 0 0 0 0 1 0
..............................................................................................................GAGAGGGGCACTCCCGCCGACC....................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................................................................ATTAACATCAGCCCGCCTCTCTTCTTT....................................................... 27 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................GCCGCCTTCACGCTGATAT............................................................................................................................................. 19 0 20 0.05 1 0 0 0 0 1 0
..................................................................................................................................................................................................................TTGGGGTTAGGTTCCACTGTGACA................. 24 0 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................................................................................GGGTTTAGGTTCCACTGTGACAG................ 23 1 20 0.05 1 0 1 0 0 0 0
...........................................................................................................................................................................................................CGCTTTATTGGGGTTAGGTTCCACT....................... 25 1 20 0.05 1 1 0 0 0 0 0
............................................................................................................................CGCCGACCTTTGTCGAGGACCAT........................................................................................................ 23 1 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................................................................AACTTTATTGGGGTTAGGTTCCACTGTG.................... 28 1 20 0.05 1 1 0 0 0 0 0
..............................................TGTCCACCCGTGCTCGCTTGGCCG..................................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0
....................................................................................................................GGCACTCCCGCCGACCTTTGT.................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................................................................................TGGGTTAGGTTCCACTGTGACAG................ 23 1 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................................................................................CTTTATTGGGGTTAGGTTCCACTGT..................... 25 0 20 0.05 1 1 0 0 0 0 0
............................................................................................................................................................................................................ACTTTATTGGGGTTAGGTTCCACTGT..................... 26 0 20 0.05 1 1 0 0 0 0 0
........................................................TGCTCGCTTGGCCGTGGGC................................................................................................................................................................................ 19 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................TATGAGAGGGGCACTCCCGCCGACCT...................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
..................................................CACCCGTGCTCGCTTGGCCG..................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................CCTTTGTCCAGGACCATGC...................................................................................................... 19 0 20 0.05 1 0 0 0 0 1 0
.........................................................................................................................................................................................................................TAGGTTCCACTGTGACAGTATAC........... 23 0 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................GGGTTAGGTTCCACTGTGACAGC............... 23 1 20 0.05 1 1 0 0 0 0 0
.....................................................................................TGTGTCGCCGCCTTCACGCTGATATTG........................................................................................................................................... 27 3 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................................................................CACTTTCTTGGGGTTAGGTTCCACT....................... 25 1 20 0.05 1 1 0 0 0 0 0
.................................................................................................................AGGGGCACTCCCGCCGACC....................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................GGGTTAGGTTCCATTGTGACAG................ 22 1 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................................................................................TTAGGTTCCACTGTGACA................. 18 0 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................................................................................................TTATTGGGGTTAGGTTCCACTGTGAC.................. 26 0 20 0.05 1 1 0 0 0 0 0
..............................................................................................................AAGAGGGGCACTCCCGCCGACCTT..................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................................................................................GGGGTTAGGTTCCACTGTGGCAG................ 23 1 20 0.05 1 1 0 0 0 0 0
........................................................................GGCGGCATTGACATGTGT................................................................................................................................................................. 18 0 20 0.05 1 1 0 0 0 0 0
..............................................................................................................................CCGACCTTTGTCCAGGACCAT........................................................................................................ 21 0 20 0.05 1 1 0 0 0 0 0
...................................................................................................................................................................................................................TGGGGTTAGGTTCCACTGTGACAGG............... 25 1 20 0.05 1 1 0 0 0 0 0
..............................................TGTCCACCCGTGCTCGCTT.......................................................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0
.....................................................................GTGGGCGGCATTGACATGT................................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0
...............................................................................................................AGAGGGGCACTCCCGCCGACCTT..................................................................................................................... 23 0 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................................................................................................GGTGTTAGGTTCCACTGTGACAG................ 23 1 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................................................................CACTTTATTGGGGTTAGGTTCCACTGT..................... 27 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................................................................CACTTTATTGGGGTTGGGTTCCAC........................ 24 1 20 0.05 1 1 0 0 0 0 0
..........................................CCTATGTCCACCCGTGCTCGCTTGGCC...................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................................................................CACTTTATTGGGGTTAGGTTCCA......................... 23 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................GCCGACCTTTGTCCAGGACCAT........................................................................................................ 22 0 20 0.05 1 1 0 0 0 0 0
...................................................ACCCGTGCTCGCTTGGCCGTGGGC................................................................................................................................................................................ 24 0 20 0.05 1 1 0 0 0 0 0
...................................................................................................................................................................................................................TGGGGTTAGGTTCCACTG...................... 18 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................................................................CACTTTATTGGGGTTAGGTTCC.......................... 22 0 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................GGGTTCGGTTCCACTGTGACAG................ 22 1 20 0.05 1 0 1 0 0 0 0
...........................................................................................................................................................................................................CATTTTATTGGGGTTAGGTTCCACT....................... 25 1 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................................................................CACTTGATTGGGGTTAGGTTCCACT....................... 25 1 20 0.05 1 1 0 0 0 0 0
...............................................GTCCACCCGTGCTCGCTTGGC....................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0
...........GACCTAGGTTCCGCTGACAC............................................................................................................................................................................................................................ 20 0 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_243:21329-21579 - dpe_1236 CATGGC-TTCCCCTGGATCCA-AGGCGACT-GTGCTTCTCGCCATGGATACAGGTGGGCA----------------C----GAGCGAACCGGCACCCGCCGTAACTGT-AC--ACATCGGCGGAAGTGCGACTATACTCTCCCCGTGAGGGCGGCTGGAAACAGGTCCT---GGTACGG-----TCTCTGAC---AGGATGCTGGTTAATTGTAGTCGGGCGGAGAGAAGAAAACTTT---CCGTGAAA----TAACCCCAA-TCCAAGGTGACACTGTCATATGCTTAGGGATCC
dp5 Unknown_singleton_3224:2085-2335 - CATGGC-TTCCCCTGGATCCA-AGGCGACT-GTGCTTCACGCCATGGATACAGGTGGGCA----------------C----GAGCGAACCGGCACCCGCCGTAACTGT-AC--ACACCGGCGGAAGTGCGACTATACTCTCCCCGTGAGGGCGGCTGGAAACAGGTCCT---GGTACGG-----TCTCTGA---AAGGATGCTGGCTAATTGTAGTCAGGCGGAGAGAAGAAAACTTT---CCGTGAAA----TAACCCCAA-TCCAAGGTGGCACTGTCATATGCCGAGGGATCC
droGri2 scaffold_14853:8684116-8684214 - C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAC---CAGTATGCTGGCGAAATTTAGTCGAGCGAAGAAAAGAAAACTCTTACC-AAAAAA----TCCGCTCAA-TCCTAAATGGATCTTCG-TATGCCGATTGTTGC
droAna3 scaffold_12671:11561-11827 - CATGGAATTTCCGTGGATCCATAGCCAACCATGGGCCGTCA-----------GCCAATCG-GGTACAACAGGGGGAG--AAACGCATGAGCTCATGTGCCGTAACTGT---GTACACCGATAGTAGTGCGACTATACTCTCCACGTGAGGGCGGCTGGTAACAGGTCC---CGGTAAGGTCATGTCTCTGCCG-A-GGATGCTGGCGAATTGTAGTCGGGCGGGGAGAAGAAAACTCCCTTC-CTCAAA----TCACCCCAA-TCCAAGGTGGAACAGCA-TATGCCGAGGGATGC
droBip1 scf7180000395888:4529-4783 - T-------TCCACTATATCCA-----GATT-AGGCCTCTCA-----------GCCAA-CG-GGTAAAACAGGGGGACCTACACGCAAGCAATTGCGTGCCGTAACTGT-GT--ACACCGCTGGTAGTTCGACTATACTCTACATATTAAGGCAGCTGGAAACAGGTCC---CGGTAAGGTCATGTCGCTGCCG-T-AGATGCTGGAAATTTGTAGTCGGGCGAGGAGAATAACACTACCTTC-CTTGAA----CCACCCCAA-TCCAAAGTGGAACAGCA-TATGCCGAAGAATGC
droKik1 scf7180000302808:51337-51508 + C--------------------------------------------------------------------------------------------ATCTACCGTAACTGT-GTGCACCGT--CGGTATTGCGACTATACTTTCCAAGCGAGAGCGGCTGGAAGCAGGTCCT-CGGTCGAAT-------T-CGACG-GGGAATGCTGACTAGTGGTAGTCGGGCGGACCTA-GGCAAGTCT-----TAAACAGGCCTTC-----C-CTTAAGCCAGGAGAGCT-------ACGCGACCC
droFic1 scf7180000454106:234693-234879 + ---------------------------------------------------------------------------------------------ACGTGCCGCAACTGT-CTGTACACC--CAGAAGTGCGACTACACTCTCCTCGTGAGGGCGGCTGGAAACAGGTGCT-TCGGCAAGGTCATGTCTCTGCCG-AAGGACGCTGGCGAATGGTAGTCGGGCGAGGAGAAGACAACTCC-----GCAAGA----TCACCCCAA-TCCAAGACGGAACCTCC-TGCGTCGAAGGATGC
droEle1 scf7180000491280:2552823-2553009 - ---------------------------------------------------------------------------------------------ACGTGCCGTAACTGT-CTGTACACC--CGGAAGTGCGACTACACTCTCCACGTGAGGGCGGCTGGAAACAGGTCCT-TCGGCAAGGTCATGTCTCTGCCG-AGGGATGCTGGCGAATGGTAGTCGGGCGCAGAGAAGACAACTCT-----TGAAGA----TCACCCCAA-TCCAAGACGGAACAGCC-GGCGTCGAAGGATGC
droRho1 scf7180000758116:174-360 - ---------------------------------------------------------------------------------------------ACGTGCCGTAACTGT-CTGTACACC--CGGAAGTGCGACTACACTCTCCTCGTGAGGGCGGCTGGAAACAGATCCT-TCGGCACGGTCATGTCTCTGCCG-AGGGATGCTGGCTAATGGTAGTCGGGCGAAGAGAAGACAACTCT-----TGAAGA----TTACCCCAA-TCCAAGACGGAACAGCC-TGCGTCGAAGGATGC
droBia1 scf7180000302113:1131819-1132001 + ---------------------------------------------------------------------------------------------GCG----GCTGCTGT-CTGTACACC--CGGAAGTGCGACTACACTCTCCCCGTGAGGGCGGCTGGAAACAGGTCCT-TCGGCAAGGTCATGTCTCTGCCG-AGGGACGCTGGCGAATGGTAGTCGGGCGAAGAGAAGACAACTCT-----GGAAGA----TCACCCCAA-TCCAAGGCGGAACAGCC-GGCGCCGAAGGATGT
droTak1 scf7180000415765:722573-722749 - ---------------------------------------------------------------------------------------------------------TAT-CTGTACACC--TGGAAGTGCGACTACACTCTCCTCGCGAGGGCGGCCGGAAACAGGTCCTTTTGGCCAGGTCATGTCTCTGCCGAAAGGACGCTGGCGAATGGTAGTCGGGCGAAGAGAAGACAACTCT-----GGAAGA----TCACCCCAA-TCCAAGGCGGAACAGCC-AGCGCCGAAGGATGT
droEug1 scf7180000409555:743778-743963 - ---------------------------------------------------------------------------------------------ACTTGCCGTAACTGT-CTGTACACC--CGGAAGTGCGACTACACTCTCCTCGCGAGGGCGGCCGGAAACAGGTGCT-TCGGCAGGGACCAGTCTCTGCCG-AAG-GTCCTGGCGAATGGTAGTCGGGCGAAGAGAAGACAACTCT-----AGAAGA----TCACCCCAA-TCCAAGGCGGAACAGCC-TGCGTCGAAGGATGT
dm3 chr3R:26248443-26248629 - ---------------------------------------------------------------------------------------------ACGTGCCGTAACTGT-CTGTACACC--CGGAAGTGCGACTACACTCTCCCCGTGAGGGCGGCCGGAAACAGGTCCT-TCGGCAAGGTCATGTCTCTGCCG-AAGGCTCCTGGCGAATGGTAGTCGGGCGAAGAGAAGACAACTCT-----GGAAGA----TTACCCCAA-TCCAAGACGGAACAGAC-AGCGTCGAGGGATGT
droSim2 2l:21626217-21626443 - C-------------------------GACT-ATTTTTCATGGCATGTA-ACAGTCGGTCGCGGT--CCCAAGGGGATCAAC-CACCTGGTGGTACGCGCCGTAATTGTGACACACTAC--TGAAAGAGCAAACACACTCTCCACGCGAGGGCGGCTGGAAACAGGCTCT--TAGTAAGGTCATGTCTCTTCTA--AGAGTGCTGGCTAATCGTAGTTGGGCT-GGAGCTGGAAACTCT-----TAAA-A----T---TTCAATTTTAAGGTGGCATT-------------------
droSec2 scaffold_4:5073019-5073205 - ---------------------------------------------------------------------------------------------ACGTGCCGTAACTGT-CTGTACATC--CGGAAGTGCGACTACACTCTCCCCGTGAGGGCGGCCGGAAACAGGTCCT-TCGGCAAGGTCATGTCTCTGCCG-AAGGCTCCTGGCGAATGGTAGTCGGGCGAAGAGAAGACAACTCT-----GGAAGA----TCACCCCAA-TCCAAGACGGAACAGCC-AGCGTCGAGGGATGT
droYak3 3R:27166406-27166612 - GAG-----CTC-------------------------------GATGGAGCCAGATGG------------------------------------ACGTGCCGTAACTGT-CTGTACACC--CGGAAGTGCGACTACACTCTCCTCGTGAGGGCGGCCGGAAACAGGACCC--CGGCCAGGTCATGTCTCTGCCG-ACGGGTCCTGGCGAATGGTAGTCGGGCGAAGAGAAGACAACTCT-----GGAAGA----TCACCCCAA-TCCAAGGCGGAACAGCC-AGCGTCGAGGGATGT
droEre2 scaffold_4820:1762614-1762800 + ---------------------------------------------------------------------------------------------ACGTGCCGTAACTGT-CTGTACACC--CGGAAGTGCGACTACACTCTCCTCGTGAGGGCGGCCGGAAACAGGAACC-GCGGCAAGGTCATGTCTCTGCCG-AAGGGTCCTGGCGAATGGTAGTCGGGCGAAGAGAAGACAACTCT-----GGAAGA----TCACCCCAA-TCCAAGACGGCACAGCC-AGCGTCGAGGGATGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
CATGGC-TTCCCCTGGATCCA-AGGCGACT-GTGCTTCTCGCCATGGATACAGGTGGGCA----------------C----GAGCGAACCGGCACCCGCCGTAACTGT-AC--ACATCGGCGGAAGTGCGACTATACTCTCCCCGTGAGGGCGGCTGGAAACAGGTCCT---GGTACGG-----TCTCTGAC---AGGATGCTGGTTAATTGTAGTCGGGCGGAGAGAAGAAAACTTT---CCGTGAAA----TAACCCCAA-TCCAAGGTGACACTGTCATATGCTTAGGGATCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................TGCTTCTCGCCATGGATACAGGTGGGCA----------------............................................................................................................................................................................................................................2811.001010000
..........................................CATGGATACAGGTGGTGC----------------............................................................................................................................................................................................................................18200.255050000
...............................................................................................................................GCGACTATACTCTCCCCGTGAGGGCGG..............................................................................................................................................27200.255050000
.......................................................................................................................................................................................................................................................................TCCAAGGTGACACTGTCATATG...........22200.255050000
........................................................................................................................................................................................................................................................................CCAAGGTGACACTGTCATATGC..........22200.051010000
..................................................................................................................................................................................................................TGTAGTCGGGCGGAGAGAAGAAAAA.............................................................25200.051010000
......................................................TGGGCA----------------C----GAGCGAACCGGCA..........................................................................................................................................................................................................20200.051010000
.............TGGATCCA-AGGCGACT-GTG......................................................................................................................................................................................................................................................................19200.051010000
..................................................................................AGCGAACCGGCACCCGCCGTA.................................................................................................................................................................................................21200.051010000
......................................................TGGGCA----------------C----GAGCGAACCGGCACCC.......................................................................................................................................................................................................23200.051010000
................................................TACAGGTGGGCA----------------C----GAGCG..................................................................................................................................................................................................................18200.051010000
..................................................................................................................................................................................................................TGTAGTCGGGCGGAGAGAAGAAA...............................................................23200.051010000
..................................................................................AGCGAACCGGCACCCGCCGTAACT..............................................................................................................................................................................................24200.051010000
......................................................................................................................................TACTCTCCCCGTGAGGGCGGCTGG..........................................................................................................................................24200.051010000
................................................................................................................................................................................................................ATTGTAGTCGGGCGGAGAG.....................................................................19200.051010000
..................................................................................AGCGAACCGGCACCCGCCGTAACTG.............................................................................................................................................................................................25200.051010000
.....................................................................................................................CGGCGGAAGTGCGACTATACTA.............................................................................................................................................................22200.051010000
...............................................................................................................................GCGACTATACTCTCCCCGTGAGGGC................................................................................................................................................25200.051010000
................................................TACAGGTGGGCA----------------C----GAGCGAACCGGC...........................................................................................................................................................................................................25200.051010000
dp5
CATGGC-TTCCCCTGGATCCA-AGGCGACT-GTGCTTCACGCCATGGATACAGGTGGGCA----------------C----GAGCGAACCGGCACCCGCCGTAACTGT-AC--ACACCGGCGGAAGTGCGACTATACTCTCCCCGTGAGGGCGGCTGGAAACAGGTCCT---GGTACGG-----TCTCTGA---AAGGATGCTGGCTAATTGTAGTCAGGCGGAGAGAAGAAAACTTT---CCGTGAAA----TAACCCCAA-TCCAAGGTGGCACTGTCATATGCCGAGGGATCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................CATGGATACAGGTGGTGC----------------............................................................................................................................................................................................................................18204.258508212000000
..............................................................................................................................TGCGACTATACTCTCCCCGTGAGGGCG...............................................................................................................................................27201.102202000000200
.......................................................................................................................................................................................................................................................................TCCAAGGTGGCACTGTCATATG...........2211.0010100000000
........................................................................................................................................................................T---GGTACGG-----TCTCTGA---AAGGATA...............................................................................................2211.0010100000000
........................................................................................................................................................................T---GGTACGG-----TCTCTGA---AAGGATG...............................................................................................2211.0010100000000
........................................................................................................................................................................T---GGTACGG-----TCTCTGA---AAGGATGC..............................................................................................2311.0010100000000
.......................................................................................................................................................................................................................................................................TCCAAGGTGGCACTGTCATATGCCGAGG.....2811.0010100000000
.....................................................................................................................................................................TCCT---GGTACGG-----TCTCTGA---AAGGATGC..............................................................................................2611.0010100000000
.......................................................................................................................................................................................................................................................................TCCAAGGTGGCACTGTCATATGC..........2311.0010100000000
............................................................................................................................................................................GGTACGG-----TCTCTGA---AAGGATGCT.............................................................................................2311.0010100000000
..............................................................................................................................................................................................................TAATTGTAGTCAGGCGGAGAGAAGA.................................................................2511.0010000000100
...............................................................................................................................GCGACTATACTCTCCCCGTGAGG..................................................................................................................................................23200.751501500000000
..............................................................................................................................TGCGACTATACTCTCCCCGTGAGGG.................................................................................................................................................25200.651301300000000
..............................................................................................................................TGCGACTATACTCTCCCCGTGAGGGCGG..............................................................................................................................................28200.501000000000100
.....................................................................................................TAACTGT-AC--ACACCGGCGGAAG..........................................................................................................................................................................22200.4590900000000
...........CCTGGATCCA-AGGCGACT-GTG......................................................................................................................................................................................................................................................................21200.4080800000000
.............................................................................................................................GTGCGACTATACTCTCCCCG.......................................................................................................................................................20200.3060600000000
...............................................................................................................................GCGACTATACTCTCCCCGTGAGGGCGG..............................................................................................................................................27200.3060600000000
.............................................................................................................................GTGCGACTATACTCTCCCCGT......................................................................................................................................................21200.2550500000000
.....................................................................................................TAACTGT-AC--ACACCGGCGG.............................................................................................................................................................................19200.2040300000100
..............................................................................................................................TGCGACTATACTCTCCCCGTGAGGGCGGCT............................................................................................................................................30200.2040000000040
................................................................................................................................CGACTATACTCTCCCCGTGA....................................................................................................................................................20200.2040400000000
..............................................................................................CCCGCCGTAACTGT-AC--ACACCG.................................................................................................................................................................................22200.2040400000000
...........................................................A----------------C----GAGCGAACCGGCACCCGCC....................................................................................................................................................................................................21200.2040400000000
...............................................................................................................................GCGACTATACTCTCCCCGTGAGGGC................................................................................................................................................25200.1530300000000
............................................................................................................................AGTGCGACTATACTCTCCCC........................................................................................................................................................20200.1530300000000
...............................................................................................................................GCGACTATACTCTCCCCGTGAGGG.................................................................................................................................................24200.1530300000000
.................................................................................................................................................................................................................................................................................CACTGTCATATGCCGAGGGAT..21200.1530000000300
.......................................................................................................................................................CGGCTGGAAACAGGTCCT---GG..........................................................................................................................20200.1020200000000
......................................................TGGGCA----------------C----GAGCGAACCGGT...........................................................................................................................................................................................................19200.1020100001000
.....................................................................................................TAACTGT-AC--ACACCGGCGGAAGTGCGAC....................................................................................................................................................................28200.1020000000200
.........................................................................................................................................................GCTGGAAACAGGTCCT---GGTACG......................................................................................................................22200.1020200000000
........................................................................................................................................CTCTCCCCGTGAGGGCGGCT............................................................................................................................................20200.1020200000000
..............................................................................................CCCGCCGTAACTGT-AC--ACACCGG................................................................................................................................................................................23200.1020200000000
..............................................................................................................................TGCGACTATACTCTCCCCGT......................................................................................................................................................20200.1020000001010
.....................................................................................................TAACTGT-AC--ACACCGGCGGAAGTAAA......................................................................................................................................................................26200.1020000000200
.....................................................................................................TAACTGT-AC--ACACCGGCGGAAGA.........................................................................................................................................................................23200.1020000000200
......................................................TGGGCA----------------C----GAGCGAACCGG............................................................................................................................................................................................................18200.1020200000000
...........................................................................................................................................................TGGAAACAGGTCCT---GGTACGG-----................................................................................................................21200.1020200000000
...................................................................................................................................................................................................................................................GTGAAA----TAACCCCAA-TCCAAG...........................21200.0510100000000
......................................................TGGGCA----------------C----GAGCGAACCGGCAC.........................................................................................................................................................................................................21200.0510000010000
................................................TACAGGTGGGCA----------------C----GAGCGAACCGG............................................................................................................................................................................................................24200.0510100000000
.........................................................................................................TGT-AC--ACACCGGCGGAAGTG........................................................................................................................................................................20200.0510000001000
..........CCCTGGATCCA-AGGCGACT-GTGCT....................................................................................................................................................................................................................................................................24200.0510100000000
......................................................TGGGCA----------------C----GAGCGAACCGGCACA........................................................................................................................................................................................................22200.0510000000100
..................................................................................................CCGTAACTGT-AC--ACACCGGCGGA............................................................................................................................................................................23200.0510100000000
.............TGGATCCA-AGGCGACT-GTGCT....................................................................................................................................................................................................................................................................21200.0510100000000
.......................................................................................................ACTGT-AC--ACACCGGCGGAAGT.........................................................................................................................................................................21200.0510100000000
.............................................................................................ACCCGCCGTAACTGT-AC--A......................................................................................................................................................................................18200.0510100000000
................................................TACAGGTGGGCA----------------C----GAGCGAA................................................................................................................................................................................................................20200.0510100000000
....................................................................................................GTAACTGT-AC--ACACCGGCGT.............................................................................................................................................................................20200.0510000000001
............................................................................................................................AGTGCGACTATACTCTCCCCGTGT....................................................................................................................................................24200.0510100000000
.............................................................................................................................................................GAAACAGGTCCT---GGTACGG-----TC..............................................................................................................21200.0510001000000
......................................................................................................................................................................................................................................................AAA----TAACCCCAA-TCCAAGGTG........................21200.0510100000000
............................................................................C----GAGCGAACCGGCACCCGCCG...................................................................................................................................................................................................21200.0510100000000
............................................................................................................................AGTGCGACTATACTCTCCCCGTGAGGGC................................................................................................................................................28200.0510000000100
.........................................................GCA----------------C----GAGCGAACCGGCACCCGC.....................................................................................................................................................................................................22200.0510100000000
...............................................ATACAGGTGGGCA----------------C----GAGCGA.................................................................................................................................................................................................................20200.0510100000000
..............GGATCCA-AGGCGACT-GTG......................................................................................................................................................................................................................................................................18200.0510100000000
..................................................CAGGTGGGCA----------------C----GAGCGAACCGG............................................................................................................................................................................................................22200.0510100000000
..........CCCTGGATCCA-AGGCGACT-GTGC.....................................................................................................................................................................................................................................................................23200.0510100000000
..............................................................................................................................TGCGACTATACTCTCCCCGTGAGGT.................................................................................................................................................25200.0510010000000
..............................................................................................................................TGCGACTATACTCTCCCCG.......................................................................................................................................................19200.0510010000000
.............TGGATCCA-AGGCGACT-GTG......................................................................................................................................................................................................................................................................19200.0510100000000
............................................................................................................................AGTGCGACTATACTCTCCCCGTGAGG..................................................................................................................................................26200.0510100000000
.....................................................................................................TAACTGT-AC--ACACCGGCGGAAGTGCG......................................................................................................................................................................26200.0510000000100
..............................................................................................................................TGCGACTATACTCTCCC.........................................................................................................................................................17200.0510000000100
..................................................................................................CCGTAACTGT-AC--ACACCGGCGT.............................................................................................................................................................................22200.0510100000000
....................................................................................................................................................................................................GGATGCTGGCTAATTGTAGTC...............................................................................21200.0510100000000
.................................................................................................................................................................................................................................................................................CACTGTCATATGCCGAGGG....19200.0510000100000
..............................................................................................................................TGCGACTATACTCTCCCCGTGT....................................................................................................................................................22200.0510100000000
.......................................................................................................ACTGT-AC--ACACCGGCGGA............................................................................................................................................................................18200.0510100000000
............................................................................C----GAGCGAACCGGCACCCGCT....................................................................................................................................................................................................20200.0510100000000
.............................................................................................................................GTGCGACTATACTCTCCCCGTGAGG..................................................................................................................................................25200.0510100000000
......................................................TGGGCA----------------C----GAGCGAACCGGCACC........................................................................................................................................................................................................22200.0510000000010
..............................................................................................CCCGCCGTAACTGT-AC--AC.....................................................................................................................................................................................18200.0510100000000
...................................................................................GCGAACCGGCACCCGCCGTAA................................................................................................................................................................................................21200.0510100000000
..............................................GATACAGGTGGGCA----------------C----GAGT...................................................................................................................................................................................................................19200.0510000010000
.............TGGATCCA-AGGCGACT-GTT......................................................................................................................................................................................................................................................................19200.0510100000000
.............................................................................................................................................................GAAACAGGTCCT---GGTACGG-----T...............................................................................................................20200.0510100000000
...................................................AGGTGGGCA----------------C----GAGCGAACC..............................................................................................................................................................................................................19200.0510000010000
.....................................................................................................TAACTGT-AC--ACACCGGCGGA............................................................................................................................................................................20200.0510000001000
.........................................................................................CGGCACCCGCCGTAACTGT-AC--ACACC..................................................................................................................................................................................26200.0510010000000
.............................................GGATACAGGTGGGCA----------------C----GAGC...................................................................................................................................................................................................................20200.0510001000000
.....................................................................................................TAACTGT-AC--ACACCGGCG..............................................................................................................................................................................18200.0510100000000
.....................................................................................................TAACTGT-AC--ACACCGGCGGAAGTGC.......................................................................................................................................................................25200.0510100000000
...................................................AGGTGGGCA----------------C----GAGCGAACCGG............................................................................................................................................................................................................21200.0510000001000
.................................................................................GAGCGAACCGGCACCCGCCG...................................................................................................................................................................................................20200.0510100000000
....................................................................................................................................TATACTCTCCCCGTGAGGGCGGCTG...........................................................................................................................................25200.0510100000000
droGri2
C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAC---CAGTATGCTGGCGAAATTTAGTCGAGCGAAGAAAAGAAAACTCTTACC-AAAAAA----TCCGCTCAA-TCCTAAATGGATCTTCG-TATGCCGATTGTTGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
CATGGAATTTCCGTGGATCCATAGCCAACCATGGGCCGTCA-----------GCCAATCG-GGTACAACAGGGGGAG--AAACGCATGAGCTCATGTGCCGTAACTGT---GTACACCGATAGTAGTGCGACTATACTCTCCACGTGAGGGCGGCTGGTAACAGGTCC---CGGTAAGGTCATGTCTCTGCCG-A-GGATGCTGGCGAATTGTAGTCGGGCGGGGAGAAGAAAACTCCCTTC-CTCAAA----TCACCCCAA-TCCAAGGTGGAACAGCA-TATGCCGAGGGATGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..TGGAATTTCCGTGGATCCATAGCCAAC...........................................................................................................................................................................................................................................................................2711.001100000
.........TCCGTGGATCCATAGCCAACCAT........................................................................................................................................................................................................................................................................2311.001100000
..................................................................................................................................................................................GTCATGTCTCTGCCG-A-GGATGCTGGC..........................................................................................26200.55111100000
..............................................................................................................................................................................TAAGGTCATGTCTCTGCCG-A-GGAT................................................................................................24200.204400000
.................................................................................................................................GACTATACTCTCCACGTGAGGGCGG..............................................................................................................................................25200.153300000
..............................................................................................................................TGCGACTATACTCTCCACGTGAGGGCGGC.............................................................................................................................................29200.153030000
....................................................................................................................................................................................CATGTCTCTGCCG-A-GGATGCTGGCGAA.......................................................................................27200.102200000
...........................................................................................................................................TCCACGTGAGGGCGGCTGGTA........................................................................................................................................21200.102200000
.................................................................................ACGCATGAGCTCATGTGCCGTAACTG.............................................................................................................................................................................................26200.102200000
..................................................................................................................................................................................GTCATGTCTCTGCCG-A-GGATGCTG............................................................................................24200.102020000
..................................................................................................................................................................................................................TGTAGTCGGGCGGGGAGAAGAAAACTC...........................................................27200.102200000
.......................................................................................GAGCTCATGTGCCGTAACTGT---GTA......................................................................................................................................................................................24200.051100000
..............................................................................................................................TGCGACTATACTCTCCACGTGA....................................................................................................................................................22200.051100000
.........................................................................................................................................................................................................................................................................CAAGGTGGAACAGCA-TATGCC.........21200.051010000
...........................................................................................................................................................................................CTGCCG-A-GGATGCTGGCGAATTG....................................................................................23200.051100000
......................................................................................................................................................................CC---CGGTAAGGTCATGTCTCTGC.........................................................................................................22200.051100000
......................................................................................TGAGCTCATGTGCCGTAACTGT---GT.......................................................................................................................................................................................24200.051100000
..............................................................................................................................TGCGACTATACTCTCCACGTGAGGGC................................................................................................................................................26200.051001000
..............................................................................................................................................................................................................................................CTTC-CTCAAA----TCACCCCAA-TC...............................21200.051100000
...................................................................................................................................................................................TCATGTCTCTGCCG-A-GGATGCTGGC..........................................................................................25200.051010000
................................................................................................................................................................................................................................................TC-CTCAAA----TCACCCCAA-TCCAAGGTGG.......................27200.051100000
..............................................................................................................................................................................................................................................CTTC-CTCAAA----TCACCCCAA-TCC..............................22200.051010000
.................................................................CAACAGGGGGAG--AAACGCATGAGCT............................................................................................................................................................................................................25200.051100000
....................................................................................................................................................................................CATGTCTCTGCCG-A-GGATGCTGG...........................................................................................23200.051001000
..........................................................................................................................................................................................................TGGCGAATTGTAGTCGGGCGGG........................................................................22200.051100000
.................................................................................................................................................................................................................................................................................AACAGCA-TATGCCGAGGGATGC22200.051100000
..............................................................................................................................................................................................................................................CTTC-CTCAAA----TCACCCCAA-TCCAAGGTG........................28200.051100000
.....................................................................................................................................................GGCGGCTGGTAACAGGTCC---CGGTAAG......................................................................................................................26200.051100000
.........................................................................................................................................TCTCCACGTGAGGGCGGCTGGA.........................................................................................................................................22200.051100000
......................................................................................................................................................................................TGTCTCTGCCG-A-GGATGCTGGC..........................................................................................22200.051000001
..........................................................................................................................GTAGTGCGACTATACTCTCCACGTGAA...................................................................................................................................................27200.051100000
droBip1
T-------TCCACTATATCCA-----GATT-AGGCCTCTCA-----------GCCAA-CG-GGTAAAACAGGGGGACCTACACGCAAGCAATTGCGTGCCGTAACTGT-GT--ACACCGCTGGTAGTTCGACTATACTCTACATATTAAGGCAGCTGGAAACAGGTCC---CGGTAAGGTCATGTCGCTGCCG-T-AGATGCTGGAAATTTGTAGTCGGGCGAGGAGAATAACACTACCTTC-CTTGAA----CCACCCCAA-TCCAAAGTGGAACAGCA-TATGCCGAAGAATGCSizeHit CountTotal NormTotal
No Reads
droKik1
C--------------------------------------------------------------------------------------------ATCTACCGTAACTGT-GTGCACCGT--CGGTATTGCGACTATACTTTCCAAGCGAGAGCGGCTGGAAGCAGGTCCT-CGGTCGAAT-------T-CGACG-GGGAATGCTGACTAGTGGTAGTCGGGCGGACCTA-GGCAAGTCT-----TAAACAGGCCTTC-----C-CTTAAGCCAGGAGAGCT-------ACGCGACCCSizeHit CountTotal NormTotal
No Reads
droFic1
---------------------------------------------------------------------------------------------ACGTGCCGCAACTGT-CTGTACACC--CAGAAGTGCGACTACACTCTCCTCGTGAGGGCGGCTGGAAACAGGTGCT-TCGGCAAGGTCATGTCTCTGCCG-AAGGACGCTGGCGAATGGTAGTCGGGCGAGGAGAAGACAACTCC-----GCAAGA----TCACCCCAA-TCCAAGACGGAACCTCC-TGCGTCGAAGGATGCSizeHit CountTotal NormTotal
No Reads
droEle1
---------------------------------------------------------------------------------------------ACGTGCCGTAACTGT-CTGTACACC--CGGAAGTGCGACTACACTCTCCACGTGAGGGCGGCTGGAAACAGGTCCT-TCGGCAAGGTCATGTCTCTGCCG-AGGGATGCTGGCGAATGGTAGTCGGGCGCAGAGAAGACAACTCT-----TGAAGA----TCACCCCAA-TCCAAGACGGAACAGCC-GGCGTCGAAGGATGCSizeHit CountTotal NormTotal
No Reads
droRho1
---------------------------------------------------------------------------------------------ACGTGCCGTAACTGT-CTGTACACC--CGGAAGTGCGACTACACTCTCCTCGTGAGGGCGGCTGGAAACAGATCCT-TCGGCACGGTCATGTCTCTGCCG-AGGGATGCTGGCTAATGGTAGTCGGGCGAAGAGAAGACAACTCT-----TGAAGA----TTACCCCAA-TCCAAGACGGAACAGCC-TGCGTCGAAGGATGCSizeHit CountTotal NormTotal
No Reads
droBia1
---------------------------------------------------------------------------------------------GCG----GCTGCTGT-CTGTACACC--CGGAAGTGCGACTACACTCTCCCCGTGAGGGCGGCTGGAAACAGGTCCT-TCGGCAAGGTCATGTCTCTGCCG-AGGGACGCTGGCGAATGGTAGTCGGGCGAAGAGAAGACAACTCT-----GGAAGA----TCACCCCAA-TCCAAGGCGGAACAGCC-GGCGCCGAAGGATGTSizeHit CountTotal NormTotal
No Reads
droTak1
---------------------------------------------------------------------------------------------------------TAT-CTGTACACC--TGGAAGTGCGACTACACTCTCCTCGCGAGGGCGGCCGGAAACAGGTCCTTTTGGCCAGGTCATGTCTCTGCCGAAAGGACGCTGGCGAATGGTAGTCGGGCGAAGAGAAGACAACTCT-----GGAAGA----TCACCCCAA-TCCAAGGCGGAACAGCC-AGCGCCGAAGGATGTSizeHit CountTotal NormTotal
No Reads
droEug1
---------------------------------------------------------------------------------------------ACTTGCCGTAACTGT-CTGTACACC--CGGAAGTGCGACTACACTCTCCTCGCGAGGGCGGCCGGAAACAGGTGCT-TCGGCAGGGACCAGTCTCTGCCG-AAG-GTCCTGGCGAATGGTAGTCGGGCGAAGAGAAGACAACTCT-----AGAAGA----TCACCCCAA-TCCAAGGCGGAACAGCC-TGCGTCGAAGGATGTSizeHit CountTotal NormTotal
No Reads
dm3
---------------------------------------------------------------------------------------------ACGTGCCGTAACTGT-CTGTACACC--CGGAAGTGCGACTACACTCTCCCCGTGAGGGCGGCCGGAAACAGGTCCT-TCGGCAAGGTCATGTCTCTGCCG-AAGGCTCCTGGCGAATGGTAGTCGGGCGAAGAGAAGACAACTCT-----GGAAGA----TTACCCCAA-TCCAAGACGGAACAGAC-AGCGTCGAGGGATGTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................ACGTGCCGTAACTGT-CTG........................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................CATGTCTCTGCCG-AAGGC.................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................TAACTGT-CTGTACACC--CGGAAG..........................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...................................................................................................................................................................................................................GTAGTCGGGCGAAGAGAC...................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
....................................................................................................................CC--CGGAAGTGCGACTACACTC.............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.....................................................................................................TAACTGT-CTGTACACC--CGGAAGT.........................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
..........................................................................................................GT-CTGTACACC--CGGAAGTG........................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
......................................................................................................AACTGT-CTGTACACC--CGGAAG..........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................CTGTACACC--CGGAAGTGCGAC....................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
............................................................................................................................................CCCCGTGAGGGCGGCCGGAAACAGGTCCT-T.............................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
................................................................................................TGCCGTAACTGT-CTGTACACC--CGGAAG..........................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
C-------------------------GACT-ATTTTTCATGGCATGTA-ACAGTCGGTCGCGGT--CCCAAGGGGATCAAC-CACCTGGTGGTACGCGCCGTAATTGTGACACACTAC--TGAAAGAGCAAACACACTCTCCACGCGAGGGCGGCTGGAAACAGGCTCT--TAGTAAGGTCATGTCTCTTCTA--AGAGTGCTGGCTAATCGTAGTTGGGCT-GGAGCTGGAAACTCT-----TAAA-A----T---TTCAATTTTAAGGTGGCATT-------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................................................GCTAATCGTAGTTGGGCT-GGAGC....................................................................2320132.652653000000261900340000000
..............................................................................................................................................................................TAAGGTCATGTCTCTTCTA--AGAGTGC..............................................................................................261115.0011500000018010282300000
.............................................................................................................ACACACTAC--TGAAAGAGCAAACACAC...............................................................................................................................................................261101.001010005014205210000000
.............................................................................................................ACACACTAC--TGAAAGAGCAAACACACTC.............................................................................................................................................................28174.00740004104901820000000
...................................................................................................................................................................................TCATGTCTCTTCTA--AGAGTGCTGGC..........................................................................................25164.0064000000000064000000
....................................TCATGGCATGTA-ACAGTCGGTCGCGGC--......................................................................................................................................................................................................................................27145.00450000001216640070000
.............................................................................................................ACACACTAC--TGAAAGAGCAAACACA................................................................................................................................................................25128.00280001001501110000000
..............................................................................................................................................................................TAAGGTCATGTCTCTTCTA--AGAGTG...............................................................................................25123.0023002200207010000000
.............................................................................................................ACACACTAC--TGAAAGAGCAAACACACT..............................................................................................................................................................27120.0020002100150200000000
...................................................................................................................................................................................TCATGTCTCTTCTA--AGAGTGCTGG...........................................................................................24120.0020000000000020000000
.......................................TGGCATGTA-ACAGTCGGTCGCGGC--......................................................................................................................................................................................................................................24118.001800000054410040000
.................................TTTTCATGGCATGTA-ACAGTCGGTCGCGGC--......................................................................................................................................................................................................................................30118.0018000000126000000000
..........................................................................................................................................................................................................TGGCTAATCGTAGTTGGGCT-GGAGC....................................................................252015.55311000035001110101421210000
.....................................................................................................TAATTGTGACACACTAC--TGAAAGAGC.......................................................................................................................................................................26115.0015000000013020000000
............................................................................................................................................................................................................GCTAATCGTAGTTGGGCT-GGAG.....................................................................222014.902980000002920060000000
................................TTTTTCATGGCATGTA-ACAGTCGGT..............................................................................................................................................................................................................................................25114.001400010061321000000
.....................................................................................................TAATTGTGACACACTAC--TGAAAGAGCA......................................................................................................................................................................27113.001300000027040000000
...........................................................................................................TGACACACTAC--TGAAAGAGCAAACA..................................................................................................................................................................25113.0013000000000112000000
..............................................................................................................................................................................TAAGGTCATGTCTCTTCTA--AGAGT................................................................................................24113.0013000000000013000000
...........................................................................................................................................................TGGAAACAGGCTCT--TAGTAAGGT....................................................................................................................23112.0012000000000000120000
.................................TTTTCATGGCATGTA-ACAGTCGGTCGC...........................................................................................................................................................................................................................................27112.001200000020540010000
..............................................................................................................................................................................................................TAATCGTAGTTGGGCT-GGAGCTGG.................................................................242011.65233033000178340014100000
...........................................................................................................................................................TGGAAACAGGCTCT--TAGTAAGGTA...................................................................................................................24111.0011000000000010100000
..............................................................................................................................................................................................................TAATCGTAGTTGGGCT-GGAGCTGGA................................................................251111.00121000000321452212000000
.............................T-ATTTTTCATGGCATGTA-ACAGT..................................................................................................................................................................................................................................................23111.001100000060400010000
...................................................................................................................................................................................TCATGTCTCTTCTA--AGAGTGCTG............................................................................................23110.0010000000000010000000
...........................................................................................................................................................TGGAAACAGGCTCT--TAGTAAGG.....................................................................................................................22110.001000000042101020000
...........................................................................................................................................TCCACGCGAGGGCGGCTGGAAACAGGC..................................................................................................................................27209.60192000650000001065133000
..............................................................................................................CACACTAC--TGAAAGAGCAAACACACTC.............................................................................................................................................................2718.00800000006000020000
................................TTTTTCATGGCATGTA-ACAGTCGGTCGC...........................................................................................................................................................................................................................................2818.00800100011311000000
..................................TTTCATGGCATGTA-ACAGTCGGTCGC...........................................................................................................................................................................................................................................2618.00800110011130000000
.............................T-ATTTTTCATGGCATGTA-ACAGTCGGT..............................................................................................................................................................................................................................................2717.00700000040300000000
...........................................................................................................TGACACACTAC--TGAAAGAGC.......................................................................................................................................................................2017.00700000000007000000
......................................ATGGCATGTA-ACAGTCGGTCGCGGC--......................................................................................................................................................................................................................................2516.00600000041100000000
...........................................................................................................TGACACACTAC--TGAAAGAGCAAAC...................................................................................................................................................................2416.00600000000006000000
..........................................................................................................................................................................................................TGGCTAATCGTAGTTGGGCT-GGAG.....................................................................24205.601120000000033077011000
...................................................................................................CGTAATTGTGACACACTAC--TGAAAGAGC.......................................................................................................................................................................2815.00500000011120000000
...........................................................................................................TGACACACTAC--TGAAAGAGCAAACACAC...............................................................................................................................................................2815.00500000000005000000
........................................................................................................TTGTGACACACTAC--TGAAAGAGCA......................................................................................................................................................................2415.00500000013010000000
..............................................................................................................CACACTAC--TGAAAGAGCAAACACACT..............................................................................................................................................................2615.00500000004000010000
.........................................................................................................TGTGACACACTAC--TGAAAGAGCAAACA..................................................................................................................................................................2715.00500000010310000000
......................................................................................................AATTGTGACACACTAC--TGAAAGAGCA......................................................................................................................................................................2615.00500000004010000000
...........................................................................................GTACGCGCCGTAATTG.............................................................................................................................................................................................16204.6092000000000092000000
...................................................................................................CGTAATTGTGACACACTAC--TGAAAGAG........................................................................................................................................................................2714.00400000003010000000
....................................TCATGGCATGTA-ACAGTCGGTCGC...........................................................................................................................................................................................................................................2414.00400000020101000000
.................................................................................................................................................................................................................TCGTAGTTGGGCT-GGAGCTGGAAACTC...........................................................2754.0020000000610310000000
...................................TTCATGGCATGTA-ACAGTCGGTCGCGGC--......................................................................................................................................................................................................................................2814.00400000030100000000
.............................................................................................................ACACACTAC--TGAAAGAGCAAACAC.................................................................................................................................................................2414.00400010010200000000
.......................................TGGCATGTA-ACAGTCGGTCGCGG.........................................................................................................................................................................................................................................2314.00400000000003010000
...............................................................................................................................................................................AAGGTCATGTCTCTTCTA--AGAGTGC..............................................................................................2514.00400010003000000000
...............................................................................................................................................................................AAGGTCATGTCTCTTCTA--AGAGTG...............................................................................................2413.00300000002100000000
....................................TCATGGCATGTA-ACAGTCGGTCGCGG.........................................................................................................................................................................................................................................2613.00300000000002010000
..................................................................................................................................................................................GTCATGTCTCTTCTA--AGAGTGCTGGC..........................................................................................2613.00300000000003000000
...........................................................................................................TGACACACTAC--TGAAAGAGCAAA....................................................................................................................................................................2313.00300000000003000000
.......................................TGGCATGTA-ACAGTCGGTCGCGGT--......................................................................................................................................................................................................................................2413.00300000000003000000
...........................................................................................................................................................................TAGTAAGGTCATGTCTCTTCTA--AGA..................................................................................................2513.00300000020100000000
..............................................................................................................CACACTAC--TGAAAGAGCAAACACAC...............................................................................................................................................................2513.00300000000000030000
...................................TTCATGGCATGTA-ACAGTCGGTCGC...........................................................................................................................................................................................................................................2513.00300000011000010000
.............................................................................................................ACACACTAC--TGAAAGAGCAAACA..................................................................................................................................................................2313.00300000030000000000
.......................................................................................................................................................................................................................................AAACTCT-----TAAA-A----T---TTCAATTTTAAGGT.........................2713.00300000000003000000
.....................................................TCGGTCGCGGT--CCCAAGGGGATCAAC-......................................................................................................................................................................................................................2613.00300200000001000000
....................................................................................................GTAATTGTGACACACTAC--TGAAAGAGC.......................................................................................................................................................................2713.00300000021000000000
..................................................................................................................................AACACACTCTCCACGCGAGGGCGGC.............................................................................................................................................2513.00300000001110000000
..................................................................................................................................................................................GTCATGTCTCTTCTA--AGAGTGCTG............................................................................................2413.00300000000003000000
.......................................................................GGGGATCAAC-CACCTGGTGGTACGCGA.....................................................................................................................................................................................................2742.751100000047000000000
..............................................................................................................................................................................................................TAATCGTAGTTGGGCT-GG.......................................................................18202.2545000043000002000000
..........................................................................................................................................................................................................TGGCTAATCGTAGTTGGGCT-GGAGCTGG.................................................................28202.2044000400354001000000
..........................................................................................................................................................................................................TGGCTAATCGTAGTTGGGCT-GGA......................................................................23202.1543000003900200020000
............................................TGTA-ACAGTCGGTCGCGGT--CCCAAG................................................................................................................................................................................................................................2512.00200000000002000000
...........................................................................................................TGACACACTAC--TGAAAGAGCAAACACA................................................................................................................................................................2712.00200000000002000000
...................................................................................................................................................................................TCATGTCTCTTCTA--AGAGTGCTGGCT.........................................................................................2612.00200000000002000000
.................................................................................................................................................................................................................TCGTAGTTGGGCT-GGAGCTGGAAACTCT-----.....................................................2852.001000000062110000000
................................TTTTTCATGGCATGTA-ACAGTCGGTCGCGGC--......................................................................................................................................................................................................................................3112.00200000020000000000
.............................................................................................................................................................................................................................................T-----TAAA-A----T---TTCAATTTTAAGGTGGA......................2412.00200000020000000000
.................................TTTTCATGGCATGTA-ACAGT..................................................................................................................................................................................................................................................2012.00200000000200000000
......................................................................................................AATTGTGACACACTAC--TGAAAGAGCAA.....................................................................................................................................................................2712.00200000000020000000
..............................................................................................................CACACTAC--TGAAAGAGCAAAC...................................................................................................................................................................2112.00200000000000020000
................................TTTTTCATGGCATGTA-ACAGTCGGTCGCG..........................................................................................................................................................................................................................................2912.00200000020000000000
...................................................................................................CGTAATTGTGACACACTAC--TGAAAGAGCA......................................................................................................................................................................2912.00200000002000000000
.......................................TGGCATGTA-ACAGTCGGTCGCGGT--CC....................................................................................................................................................................................................................................2612.00200010000001000000
....................................................................................................................AC--TGAAAGAGCAAACACA................................................................................................................................................................1812.00200000000002000000
...................................TTCATGGCATGTA-ACAGTCGGTCG............................................................................................................................................................................................................................................2412.00200000000010010000
.................................TTTTCATGGCATGTA-ACAGTCGGT..............................................................................................................................................................................................................................................2412.00200000020000000000
....................................................................................................................................................................................................................................TGGAAACTCT-----TAAA-A----T---TTCAATTT...............................2412.00200000000200000000
.............................T-ATTTTTCATGGCATGT.........................................................................................................................................................................................................................................................1712.00200000000002000000
.....................................................................................................................................................................................ATGTCTCTTCTA--AGAGTGC..............................................................................................1912.00200000000002000000
..................................................................................................................................................................................GTCATGTCTCTTCTA--AGAGTG...............................................................................................2112.00200200000000000000
..............................................................................................................................................................................TAAGGTCATGTCTCTTCTA--AGAG.................................................................................................2312.00200010000001000000
......................................................................................................AATTGTGACACACTAC--TGAAAGAGC.......................................................................................................................................................................2512.00200000011000000000
...........................................................................................................................................................TGGAAACAGGCTCT--TAGTAAG......................................................................................................................2112.00200000010001000000
.................................TTTTCATGGCATGTA-ACAGTCGGTC.............................................................................................................................................................................................................................................2512.00200000010100000000
.........................................................................................................................GAAAGAGCAAACACAC...............................................................................................................................................................1612.00200000000002000000
.........................................................................................................................................................GCTGGAAACAGGCTCT--TAGTAAGGTCA..................................................................................................................2712.00200000020000000000
.........................................................................................................TGTGACACACTAC--TGAAAGAGCAAAC...................................................................................................................................................................2612.00200000001010000000
..............................................................................................................................................................................TAAGGTCATGTCTCTTCTA--AGAGTGCT.............................................................................................2712.00200000000002000000
..............................................................................................................CACACTAC--TGAAAGAGCAAACAC.................................................................................................................................................................2312.00200000000000020000
.............................................................................................................ACACACTAC--TGAAAGAGCAAAC...................................................................................................................................................................2212.00200000010100000000
............................................TGTA-ACAGTCGGTCGCGGT--CCCA..................................................................................................................................................................................................................................2312.00200000000002000000
.................................................................................................................................................................................................................TCGTAGTTGGGCT-GGAGCTGG.................................................................21201.9038005000030030000000
..............................................................................................................................................................................................................TAATCGTAGTTGGGCT-GGAGCTGGAAACTC...........................................................3051.80900000072000000000
..............................................................................................................................................................................................................TAATCGTAGTTGGGCT-GGAGCTGGAAA..............................................................27111.551700000014930000000
........................................................................................................................................................................................................................TGGGCT-GGAGCTGGAAACTCT-----TAAA-A----...........................................2641.50600000010320000000
..............................................................................................................................................................................................................TAATCGTAGTTGGGCT-GGAGCTG..................................................................23201.5030000000001808040000
...............................................................................................................................................................................................TA--AGAGTGCTGGCTAATCGTAGTT...............................................................................24201.3527000000119700000000
............................................................................................................................................................................................................GCTAATCGTAGTTGGGCT-GGAGCT...................................................................24201.2525000000025000000000
............................................................................................................................................................................................................GCTAATCGTAGTTGGGCT-GGAGCTGG.................................................................26201.2525000000232000000000
..............................................................................................................................................................................................................TAATCGTAGTTGGGCT-GGAGC....................................................................21201.1523000000023000000000
..............................................................................................................................................................................................................TAATCGTAGTTGGGCT-GGAG.....................................................................20201.1523007000000412000000
.........................................................................................................................................TCTCCACGCGAGGGCGGCTGGAAACAGG...................................................................................................................................28201.1022000800001200110000
.......................................................................................................................................................................................................TGCTGGCTAATCGTAGTTGGGCT-GGA......................................................................26201.1022000000901300000000
..............................................................................................................................................................................................................TAATCGTAGTTGGGCT-GGAGCTGGAAAC.............................................................28101.101100000052400000000
..........................................................................................................................................................................................................TGGCTAATCGTAGTT...............................................................................15201.0521000000000021000000
...............................................................................................................ACACTAC--TGAAAGAGC.......................................................................................................................................................................1611.00100000000001000000
.....................................................................................................TAATTGTGACACACTAC--TGAAAGAGCAAA....................................................................................................................................................................2911.00100000000010000000
....................................................................................................GTAATTGTGACACACTAC--TGAAAGAGCA......................................................................................................................................................................2811.00100000000010000000
........................................................................................................TTGTGACACACTAC--TGAAAGAGCAAA....................................................................................................................................................................2611.00100000000010000000
..............................................................................................................................................................................TAAGGTCATGTCTCTTCTA--A....................................................................................................2011.00100001000000000000
........................................................GTCGCGGT--CCCAAGGGGATCAAC-......................................................................................................................................................................................................................2311.00100000000001000000
.......................................................................................................................................................................................GTCTCTTCTA--AGAGTGCTGGC..........................................................................................2111.00100000000001000000
..............................................................................................................CACACTAC--TGAAAGAGCAAACACA................................................................................................................................................................2411.00100000000000010000
...................................................................................................................................................................................TCATGTCTCTTCTA--AGA..................................................................................................1711.00100000010000000000
...........................................................................................................................................................................................................................................TCT-----TAAA-A----T---TTCAATTTTAAGGTGGA......................2611.00100000000100000000
...................................................................................................................................................................................TCATGTCTCTTCTA--AGAGTGCTGA...........................................................................................2411.00100000000001000000
.................................TTTTCATGGCATGTA-ACAGTCGGTCG............................................................................................................................................................................................................................................2611.00100000000010000000
...........................................................................................................TGACACACTAC--TGAAAGAGCA......................................................................................................................................................................2111.00100000000001000000
..........................................................................................................................................................................................TCTTCTA--AGAGTGCTGGC..........................................................................................1811.00100000000001000000
................................TTTTTCATGGCATGTA-ACAGTCGGTC.............................................................................................................................................................................................................................................2611.00100000001000000000
.......................................TGGCATGTA-ACAGTCGGTCGCGGC--AA....................................................................................................................................................................................................................................2611.00100000000000010000
....................................................................................................................................................................................CATGTCTCTTCTA--AGAGTGCT.............................................................................................2111.00100000000010000000
....................................TCATGGCATGTA-ACAGTCGGTCGCGGT--......................................................................................................................................................................................................................................2711.00100000000000010000
.....................................................................................................TAATTGTGACACACTAC--TGAAAGAG........................................................................................................................................................................2511.00100000001000000000
...........................................................................................................TGACACACTAC--TGAAAGAGCAAACAC.................................................................................................................................................................2611.00100000000000010000
....................................................GTCGGTCGCGGT--CCCAAGGGGATCAAC-......................................................................................................................................................................................................................2711.00100100000000000000
.......................................................................................................................................................................................GTCTCTTCTA--AGAGTGCTGG...........................................................................................2011.00100000000001000000
.......................................................................................................ATTGTGACACACTAC--TGAAAGAGCAAA....................................................................................................................................................................2711.00100000001000000000
..............................................................................................................................AGCAAACACACTCTCCACGCGAGGGCGGC.............................................................................................................................................2911.00100000001000000000
.............................................................................................................ACACACTAC--TGAAAGAGCAAACACACG..............................................................................................................................................................2711.00100100000000000000
...................................................................................................................................................................GGCTCT--TAGTAAGGT....................................................................................................................1511.00100000000001000000
C-------------------------GACT-ATTTTTCATGGCATGTA-ACAGT..................................................................................................................................................................................................................................................2711.00100000000001000000
...................................................................................................................................................................................TCATGTCTCTTCTA--AGAGTGCT.............................................................................................2211.00100000000001000000
.............................................................................................................................................................................................TCTA--AGAGTGCTGGCTAATCGTAGTT...............................................................................2611.00100000000001000000
...................................................................................................................................................................................................................................................TAAA-A----T---TTCAATTTTAAGGTGGA......................2311.00100000010000000000
..........................................................................................................................................................................................TCTTCTA--AGAGTGCTGGCTAATCGTA..................................................................................2611.00100000001000000000
...................................................................................................................................................................................TCATGTCTCTTCTA--AGAGTGCTGGTG.........................................................................................2611.00100000000001000000
........................................................................................................................................................................................TCTCTTCTA--AGAGTGCTGGCTAATCGT...................................................................................2711.00100010000000000000
............................................TGTA-ACAGTCGGTCGCGGT--CCCAAGGGG.............................................................................................................................................................................................................................2811.00100000000001000000
........................................GGCATGTA-ACAGTCGGTCGCGGC--......................................................................................................................................................................................................................................2311.00100000000010000000
......................................................................................................AATTGTGACACACTAC--TGAAAGAGCAAA....................................................................................................................................................................2811.00100000001000000000
...................................................................................................CGTAATTGTGACACACTAC--TGAAAG..........................................................................................................................................................................2521.00200000002000000000
...........................................................................................................................................................TGGAAACAGGCTCT--TAGTAAAA.....................................................................................................................2211.00100000000000010000
...........................................ATGTA-ACAGTCGGTCGC...........................................................................................................................................................................................................................................1711.00100000000001000000
....................................................................................................................................................................................CATGTCTCTTCTA--AGAGTGCTGGC..........................................................................................2411.00100000000010000000
....................................TCATGGCATGTA-ACAGTCGGTCGCG..........................................................................................................................................................................................................................................2511.00100000010000000000
.......................................TGGCATGTA-ACAGTCGGTCGCGGT--C.....................................................................................................................................................................................................................................2511.00100000000001000000
.........................................GCATGTA-ACAGTCGGTC.............................................................................................................................................................................................................................................1711.00100000000001000000
...........................................................................................................................................................TGGAAACAGGCTCT--TAGTAAGGTAC..................................................................................................................2511.00100000000000010000
......................................ATGGCATGTA-ACAGTCGGTCGCGGT--......................................................................................................................................................................................................................................2511.00100000000001000000
.............................................................................................................................................................................................................................T-GGAGCTGGAAACTCT-----TAAA-A----T---TTCAA..................................2711.00100000000010000000
...................................................................................................................................................................................TCATGTCTCTTCTA--AGAGTGCTGGA..........................................................................................2511.00100000000001000000
......................................................CGGTCGCGGT--CCCAAGGGGATCAAC-......................................................................................................................................................................................................................2511.00100000000001000000
............................................TGTA-ACAGTCGGTCGCGGT--CCCAAGG...............................................................................................................................................................................................................................2611.00100000000001000000
................................TTTTTCATGGCATGTA-ACAGT..................................................................................................................................................................................................................................................2111.00100000010000000000
...........................................................................................................................................................................................CTTCTA--AGAGTGCTGGC..........................................................................................1711.00100000000001000000
.........................................................................................................TGTGACACACTAC--TGAAAGAGCAAA....................................................................................................................................................................2511.00100000000010000000
.............................................................................................................ACACACTAC--TGAAAGAGCAAACACAAAA.............................................................................................................................................................2811.00100000000100000000
..............................................TA-ACAGTCGGTCGCGGT--CCCAAGG...............................................................................................................................................................................................................................2411.00100000000001000000
.......................................TGGCATGTA-ACAGTCGGTCGCG..........................................................................................................................................................................................................................................2211.00100000000100000000
.......................................................................................................ATTGTGACACACTAC--TGAAAGAGCAAACA..................................................................................................................................................................2911.00100000001000000000
...........................................................................................................................................................................TAGTAAGGTCATGTCTCTTCTA--AGAG.................................................................................................2611.00100000000001000000
...........................................................................................................................................................................................CTTCTA--AGAGTGCTGGT..........................................................................................1711.00100000000001000000
...................................................................................................................................ACACACTCTCCACGCGAGGGCGGC.............................................................................................................................................2411.00100000001000000000
....................................................................................................................................................................................................................................TGGAAACTCT-----TAAA-A----T---TTCAATTTTAAGGT.........................3011.00100000010000000000
...........................................................................................................................................................TGGAAACAGGCTCT--TAGTAAA......................................................................................................................2111.00100000010000000000
...........................................ATGTA-ACAGTCGGTCGCGG.........................................................................................................................................................................................................................................1911.00100000000001000000
....................................................................................................................................CACACTCTCCACGCGAGGGCGGC.............................................................................................................................................2311.00100000000001000000
......................................................................................................................................................................TCT--TAGTAAGGTCATGTCTCTTC.........................................................................................................2311.00100000000100000000
..................................TTTCATGGCATGTA-ACAGTCGGTCGCGGC--......................................................................................................................................................................................................................................2911.00100000001000000000
............................................................................................................................................................................................TTCTA--AGAGTGCTGGCTAATCGTAGTT...............................................................................2711.00100000001000000000
...........................................................................................................................................................TGGAAACAGGCTCT--TAGTAAGA.....................................................................................................................2211.00100000000000010000
.....................................CATGGCATGTA-ACAGTCGGTCGCGGC--......................................................................................................................................................................................................................................2611.00100000010000000000
..................................................................CCCAAGGGGATCAAC-CACCTGG...............................................................................................................................................................................................................2211.00100000000100000000
.............................................................................................................ACACACTAC--TGAAAGAGCAAACACACA..............................................................................................................................................................2711.00100000010000000000
..................................................................................................................................................................AGGCTCT--TAGTAAGGTCA..................................................................................................................1811.00100000000001000000
........................................................................................................................................................................................................................................AACTCT-----TAAA-A----T---TTCAATTTTAAGG..........................2511.00100010000000000000
.......................................................................................................ATTGTGACACACTAC--TGAAAGAGCA......................................................................................................................................................................2511.00100000000010000000
........................................GGCATGTA-ACAGTCGGTCGCGG.........................................................................................................................................................................................................................................2211.00100000000000010000
...................................................................................................................................................................................TCATGTCTCTTCTA--AGAGTGC..............................................................................................2111.00100000000001000000
........................................................................................................TTGTGACACACTAC--TGAAAGAGC.......................................................................................................................................................................2311.00100000000010000000
....................................TCATGGCATGTA-ACAGTCGGTCG............................................................................................................................................................................................................................................2311.00100010000000000000
........................................................................................................................................................................T--TAGTAAGGTCATGTCTCTTCTA--AGA..................................................................................................2611.00100000000001000000
...............................................................T--CCCAAGGGGATCAAC-CACCTGG...............................................................................................................................................................................................................2311.00100000000100000000
......................................ATGGCATGTA-ACAGTCGGTCGCGGT--CC....................................................................................................................................................................................................................................2711.00100000000001000000
.................................TTTTCATGGCATGTA-ACAGTCGGTCGA...........................................................................................................................................................................................................................................2711.00100000000000010000
...........................................................................................................................................................TGGAAACAGGCTCT--TAGTAAGGTAT..................................................................................................................2521.00200000000000020000
..............................................................................................................................................................................TAAGGTCATGTCTCTTC.........................................................................................................1711.00100000000001000000
......................................ATGGCATGTA-ACAGTCGGTCGCGGC--T.....................................................................................................................................................................................................................................2611.00100000010000000000
...........................................................................................................................................................TGGAAACAGGCTCT--TAGTAAGGTCA..................................................................................................................2511.00100000000001000000
................................................................................................................................................................................AGGTCATGTCTCTTCTA--AGAGTGC..............................................................................................2411.00100000001000000000
...........................................................................................................................................................TGGAAACAGGCTCT--TAGTA........................................................................................................................1911.00100000010000000000
..................................................................................................................................................................................GTCATGTCTCTTCTA--AGAGTGCTGG...........................................................................................2511.00100000000001000000
...................................................................................................................................................................................TCATGTCTCTTCTA--AGAGT................................................................................................1911.00100000000001000000
...........................................................................................................TGACACACTAC--TGAAAGAGCAAACACACT..............................................................................................................................................................2911.00100000000001000000
.........................................................................................................................................................GCTGGAAACAGGCTCT--TAGTAAGGTC...................................................................................................................2611.00100000010000000000
........................................................................................................TTGTGACACACTAC--TGAAAGAGCAAAC...................................................................................................................................................................2711.00100000000010000000
............................................................................................................................................................................................TTCTA--AGAGTGCTGGCTAATCGTAGT................................................................................2611.00100000000001000000
....................................................................................................................AC--TGAAAGAGCAAACA..................................................................................................................................................................1611.00100000000001000000
...........................................................................................................................................................TGGAAACAGGCTCT--TAGTAAGGTT...................................................................................................................2411.00100000000000010000
...................................TTCATGGCATGTA-ACAGTCGGTCGCGG.........................................................................................................................................................................................................................................2711.00100010000000000000
...............................................A-ACAGTCGGTCGCGGT--CCCAAGG...............................................................................................................................................................................................................................2311.00100000000001000000
.......................................................................................................................................................CGGCTGGAAACAGGCTCT--TAGTAAGGT....................................................................................................................2711.00100000000100000000
...............................................................................................................ACACTAC--TGAAAGAGCAAAC...................................................................................................................................................................2011.00100000000001000000
...........................................................................................................................................................................TAGTAAGGTCATGTCTCTTCTA--AGAGTGC..............................................................................................2911.00100000010000000000
...................................................................................................................................................................................TCATGTCTCTTCTA--AGAGTG...............................................................................................2011.00100000000001000000
............................................................................................................................................................................................................GCTAATCGTAGTTGGGCT-GG.......................................................................20200.8016000000150001000000
.......................................................................GGGGATCAAC-CACCTGGTGGTACGCGC.....................................................................................................................................................................................................2740.75300000012000000000
..............................................................................................................................................................................................................TAATCGTAGTTGGGCT-GGAGCTGGAA...............................................................26110.73800010001510000000
...............................................................................................................................................................................................TA--AGAGTGCTGGCTAATCGTAGTTGGGC...........................................................................28200.701400000060800000000
.........................................................................................................................................TCTCCACGCGAGGGCGGCTGGAAA.......................................................................................................................................24200.7014000100002011000000
.............................................................................................................................................CACGCGAGGGCGGCTGGAAACAGGC..................................................................................................................................25200.651300000042600010000
............................................................................................................................................................................................................GCTAATCGTAGTTGGGCT-GGAGCTGGA................................................................27110.64700000021310000000
.................................................................................................................................................................................................................TCGTAGTTGGGCT-GGAGCTGGAAAC.............................................................25100.60600000011400000000
..............................................................................................................................................ACGCGAGGGCGGCTGGAAACAGGC..................................................................................................................................24200.6012000000100011000000
.......................................................................................................................................................................................................TGCTGGCTAATCGTAGTTGGGC...........................................................................22200.5511000000000011000000
.................................................................................................................................................................................................................TCGTAGTTGGGCT-GGAGCTGGA................................................................22110.55600000012201000000
........................................................................................................................................................................................................................TGGGCT-GGAGCTGGAAACTCT-----TAAA-A----T---.......................................2740.50200000000200000000
.......................................................................GGGGATCAAC-CACCTGGTGGTAC.........................................................................................................................................................................................................2340.50200000010010000000
.............................................................................................................................................................................................................................................................T---TTCAATTTTAAGGTGGA......................1820.50100000010000000000
.................................................................................................................................................................................................................TCGTAGTTGGGCT-GGAGCTGGAAACTCT-----T....................................................2940.50200000010100000000
............................................................................................TACGCGCCGTAATTGTGACACACTAC--TGA.............................................................................................................................................................................2920.50100000001000000000
.....................................................................................................................................................................................ATGTCTCTTCTA--AGAGTGCTGGTC.........................................................................................2420.50100000000001000000
......................................................................................TGGTGGTACGCGCCGTAATT..............................................................................................................................................................................................2020.50100000000001000000
................................................................................................CGCCGTAATTGTGACACACTAC--TGAAAG..........................................................................................................................................................................2820.50100000001000000000
...........................................................................................................................................TCCACGCGAGGGCGGCTGGAAACAGG...................................................................................................................................26200.501000090000100000000
......................................................................................TGGTGGTACGCGCCGTAATTG.............................................................................................................................................................................................2120.50100000000001000000
............................................................................................................................................................................................................GCTAATCGTAGTTGGGCT-GGA......................................................................21200.5010000000010000000000
....................................................................CAAGGGGATCAAC-CACCTGGTGGTACG........................................................................................................................................................................................................2720.50100000000001000000
.........................................................................................................................GAAAGAGCAAACACA................................................................................................................................................................1520.50100000000001000000
............................................................................................................................................................................................................GCTAATCGTAGTTGGGCT-GGAGT....................................................................23200.45900000002700000000
..........................................................................................................................................................................................................TGGCTAATCGTAGTTGGGCT-GGAGCTG..................................................................27200.45900010000008000000
..........................................................................................................................................................................................................TGGCTAATCGTAGTTGGGCT-GGAGCTGGA................................................................29100.40400000040000000000
droSec2
---------------------------------------------------------------------------------------------ACGTGCCGTAACTGT-CTGTACATC--CGGAAGTGCGACTACACTCTCCCCGTGAGGGCGGCCGGAAACAGGTCCT-TCGGCAAGGTCATGTCTCTGCCG-AAGGCTCCTGGCGAATGGTAGTCGGGCGAAGAGAAGACAACTCT-----GGAAGA----TCACCCCAA-TCCAAGACGGAACAGCC-AGCGTCGAGGGATGTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................CTGTACATC--CGGAAGTGCGAC....................................................................................................................................................................2111.0010010
droYak3
GAG-----CTC-------------------------------GATGGAGCCAGATGG------------------------------------ACGTGCCGTAACTGT-CTGTACACC--CGGAAGTGCGACTACACTCTCCTCGTGAGGGCGGCCGGAAACAGGACCC--CGGCCAGGTCATGTCTCTGCCG-ACGGGTCCTGGCGAATGGTAGTCGGGCGAAGAGAAGACAACTCT-----GGAAGA----TCACCCCAA-TCCAAGGCGGAACAGCC-AGCGTCGAGGGATGTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
---------------------------------------------------------------------------------------------ACGTGCCGTAACTGT-CTGTACACC--CGGAAGTGCGACTACACTCTCCTCGTGAGGGCGGCCGGAAACAGGAACC-GCGGCAAGGTCATGTCTCTGCCG-AAGGGTCCTGGCGAATGGTAGTCGGGCGAAGAGAAGACAACTCT-----GGAAGA----TCACCCCAA-TCCAAGACGGCACAGCC-AGCGTCGAGGGATGTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................................................................................................................................................CG-AAGGGTCCTGGCGAATGGTAGT................................................................................2411.0010000100

Generated: 06/08/2015 at 03:57 PM