dpe_1210

exon [dper_GLEANR_4712:3]; CDS [Dper\GL22470-cds]; CDS [Dper\GL22470-cds]; exon [dper_GLEANR_4712:2]; intron [Dper\GL22470-in]

##################################################-----------------------------------------------------------------------------------------------------------------------------------------------################################################## CTAGCAGAAGATGGAGCCGCCGTGGTCATCAGCAGTCGCAAGCAAAGAACGTGGACAATGCCCTGGCGGAGCTGCGCAAATTGAATCTGAATGTGCACGGCCTGAAATGTCACGTGAGCGAGCCGCAGGGATCGCAAACAGCTCTTCGATGAAACCATCAGCAAGTACGGAAAAGCTCAATATATTTAGTTAGCAACGCTGCCACAAACCCCGCCGTAGGTGGAGTCCTGGATTGCGATGAGA *****************************************************************************.............((........((((..((...((..((((.((....)).))))..)).))..)))).....))**************************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M021 embryo	V042 embryo	V111 male body	M042 female body	V057 head
...............................................................................ATTGAATCTGAATGTGCACGG...............................................................................................................................................	21	0	1	2.00	2	2	0	0	0	0
...........................................................................................................................................................................................................ACAAACCCCGCCGTAGGTGGA...................	21	0	1	2.00	2	0	2	0	0	0
..............................................................................................GCACGGCCTGAAATGTCACGT................................................................................................................................	21	0	1	2.00	2	2	0	0	0	0
.........GATGGAGCCGCCGTGGTCATCAGC..................................................................................................................................................................................................................	24	0	1	1.00	1	0	1	0	0	0
............................................AAGAACGTGGACAATGCCCTGGC................................................................................................................................................................................	23	0	1	1.00	1	0	1	0	0	0
............................................................................................................................................................................................GTTAGCAACGCTGCCACAAACCCCGC.............................	26	0	1	1.00	1	0	0	0	1	0
...........................................................................................TGTGCACGGCCTGAAATGTCACGTGAGC............................................................................................................................	28	0	1	1.00	1	1	0	0	0	0
..........ATGGAGCCGCCGTGGTCATCAGCAGTCG.............................................................................................................................................................................................................	28	0	1	1.00	1	0	0	1	0	0
..............................................................................AATTGAATCTGAATGTGCAC.................................................................................................................................................	20	0	1	1.00	1	1	0	0	0	0
........................GTCATCAGCAGTCGCAAGC........................................................................................................................................................................................................	19	0	1	1.00	1	1	0	0	0	0
...............................................................................ATTGAATCTGAATGTGCAC.................................................................................................................................................	19	0	1	1.00	1	1	0	0	0	0
..............................................................................................................CACGTGAGCGAGCCGCAGGATC...............................................................................................................	22	3	1	1.00	1	0	1	0	0	0
...........................................................................................................................................................CATCAGCAAGTACGGAAAGCC...................................................................	21	2	1	1.00	1	1	0	0	0	0
..............................................................................................................CACGTGAGCGAGCCGCAGGA.................................................................................................................	20	1	1	1.00	1	0	0	1	0	0
........AGATGGAGCCGCCGTGGTCATCAGCA.................................................................................................................................................................................................................	26	0	1	1.00	1	0	0	1	0	0
...........................................................................................................................................................CATCAGCAAGTACGGAAAGCT...................................................................	21	3	1	1.00	1	1	0	0	0	0
.....................................................................................................................................GCAAACAGCTCTTCGATGAAAC........................................................................................	22	0	1	1.00	1	0	1	0	0	0
.....AGAAGATGGAGCCGCCGTGGT.........................................................................................................................................................................................................................	21	0	1	1.00	1	0	1	0	0	0
......GAAGATGGAGCCGCCGTGGT.........................................................................................................................................................................................................................	20	0	1	1.00	1	0	0	1	0	0
.....................................................................................................................................................TGAAACCATCATAAAGTAAGG.........................................................................	21	3	3	0.33	1	0	0	0	0	1
..........................................TAAGGAACGCGGACAATGCC.....................................................................................................................................................................................	20	3	10	0.20	2	0	0	0	0	2
..........................................TAAAGCACGCGGACAATGCC.....................................................................................................................................................................................	20	3	11	0.09	1	0	0	0	0	1

GATCGTCTTCTACCTCGGCGGCACCAGTAGTCGTCAGCGTTCGTTTCTTGCACCTGTTACGGGACCGCCTCGACGCGTTTAACTTAGACTTACACGTGCCGGACTTTACAGTGCACTCGCTCGGCGTCCCTAGCGTTTGTCGAGAAGCTACTTTGGTAGTCGTTCATGCCTTTTCGAGTTATATAAATCAATCGTTGCGACGGTGTTTGGGGCGGCATCCACCTCAGGACCTAACGCTACTCT **************************************************************************************.............((........((((..((...((..((((.((....)).))))..)).))..)))).....))*****************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V057 head	M042 female body	V042 embryo
.......................................................................................................................................................................................TGAGTCAATCGCTGCGACGGT.......................................	21	3	3	0.33	1	1	0	0
........................................................................................................................................................................................TGATCGATCGTTGCGACGGT.......................................	20	3	3	0.33	1	1	0	0
...............................................................................................................................CCCTAGCGTTTGTAAAGAA.................................................................................................	19	2	10	0.10	1	0	1	0
.........................................................................................................................................TGTCGTGCAACTACTTTGG.......................................................................................	19	3	10	0.10	1	0	1	0
.........................................................................................................................................................................................TATCAATTGGTGCGACGGT.......................................	19	3	14	0.07	1	1	0	0
.........................................................................................................................................................TGTTACTCGTGCATGCCTT.......................................................................	19	3	19	0.05	1	0	0	1
......................................................................................................................................................................................................GTCGGTGTCTGGGGCGGC...........................	18	2	20	0.05	1	1	0	0
.........................................................................................................................................................TGGTATTCGTACAGGCCTT.......................................................................	19	3	20	0.05	1	0	0	1

Species	Coordinate	ID	Alignment
droPer2	scaffold_23:1271248-1271490 -	dpe_1210	CTAGCAGAAGATGGAGCCGCCGTGGTCATCAGCAGTCGCAAGCA-AAGAACGTGGACAATGCCCTGGCGGAGCTGCGCAAATTGAATCTGAATGTGCACGGCCTGAAATGTCACGTGAGCGAGCCGCAGGGATCGCAAACAGCTCTTCGATGAAACCATCAGCAAGTACGGAAAAGCTCAATATATTTAGTTAGCAACGCTGCCACAAACCCCGCCGTAGGTGGAGTCCTGGATTGCGATGAGA
dp5	XR_group3a:1249648-1249888 -		CTAGCAGAAGATGGAGCCGCCGTGGTCATCAGCAGTCGCAAGCAAAAGAACGTGGACAATGCCCTGGCGGAGCTGCGCAAATTGAATCTGAATGTGCACGGCCTGAAATGTCACGTGAGCGAGCCGCAG-GATCGCAAACAGCTCTTCGATGAAACCATCAGCAAGTACGGAA-AGCTCAATAT-ATTAGTTAGCAACGCTGCCACAAACCCCGCCGTAGGTGGAGTCCTGGATTGCGATGAGA
droWil2	scf2_1100000004768:2686629-2686868 +		CTAGCGGAGGACGGAGCAGCCGTGGTTATTAGCAGCCGTAAGCAAAAAAATGTGGATAATGCCTTAGCCGAGCTAAGGAAACTTAATCTTAATGTTCATGG-CTGAAATGTCATGTTAGTGACGCTCAG-GATCGGAAGGAGTTGTTTGAACAAACCATTAGTAAATATGGCA-AATTGAATAT-ATTGATTAGCAATGCCGCCACCAATCCGGCAGTGGGTGGCGTCCTCGAATGTGATGAAC
droVir3	scaffold_13049:7853543-7853783 -		TTGGCTGAGGATGGTGCAGCCGTCGTGATCAGCAGTCGAAAGCAGAAGAATGTGGACAATGCGCTTGCCGAGCTGCGTAAACTGAATCTTAACGTGCATGGCCTGAAGTGCCACGTGAGCGAGCCGCAA-GATCGTAAGCAGCTCTTCGAGGAAACCATCAGCAAATATGGCA-AGCTCAACAT-ATTGGTTAGTAATGCCGCTACCAATCCTGCCGTGGGCGGTGTTCTGGAATGTGATGAGA
droMoj3	scaffold_6680:11506475-11506715 -		TTGGCTGAGGATGGCGCTGCGGTGGTCATCAGCAGCCGCAAGCAAAAGAATGTGGACAATGCCCTTGCCGAGCTGCGCAAACTGAATCTTAATGTGCATGGACTCAAGTGCCACGTGAGCGAAGCGCAA-GATCGCAAGCAGCTCTTCGAGGAGACCATCAGCAAATATGGCA-AGCTAAACAT-TTTGGTTAGTAATGCTGCTACTAATCCTGCCGTTGGCGGCGTGCTGGAATGCGATGAGA
droGri2	scaffold_15110:6906921-6907161 -		TTGGCTGAGGATGGTGCCTCCGTTGTTATAAGCAGTCGGAAGCAAAAGAACGTGGACAATGCGCTTGCCGAGCTACGCAAATTGAATCTGAATGTGCATGGCCTCAAGTGCCATGTGGCCGAGCCGCAG-GATCGCAAGCAGTTGTTCGAGGAGACCATTAGCAAGTATGGCA-AACTCAATAT-TTTGATTAGTAATGCCGCCACGAATCCTGCTGTGGGCGGTGTGATGGACTGCGACGAGA
droAna3	scaffold_13337:13403331-13403571 +		TTGGCTGAGGATGGAGCTGCAGTGGTCATCAGCAGCCGGAAACAGAAGAACGTGGATAACGCTTTGGCGGAGCTCCGAAAACTAAACCTCAACGTGCATGGACTGAAGTGTCATGTTGGAGAAGCCCAG-GACCGCAAACAGCTCTTCGAGGAGACCATCAGCAAGTTCGGCA-AGCTGAACAT-TCTGGTCAGTAACGCGGCCACCAACCCCGCAGTGGGTGGTGTCCTGGAGTGCGACGAAA
droBip1	scf7180000396589:611227-611467 -		TTGGCTGAGGATGGAGCTGCCGTGGTCATCAGCAGCCGAAAGCAGAAGAACGTGGATAACGCTTTGGCAGAACTGCGAAAACTGAACCTTAACGTGCACGGGCTGAAGTGTCATGTAGGCGAAGCTCAG-GACCGCAAACAGCTCTTCGAGGAGACCATCAGCAAGTTCGGCA-AGCTCAACAT-TTTGGTCAGCAACGCAGCCAGCAACCCAGCAGTGGGCGGTGTCCTGGAGTGCGATGAAA
droKik1	scf7180000302274:572898-573138 -		TTGGCCGAGGACGGAGCCGCCGTGGTCATTAGCAGCCGGAAACAAAAGAACGTGGACAACGCTCTGGCGGAGCTGCGCAAGCTGAACCTAAATGTCCATGGACTCAAGTGTCACGTGAGCGAGCCCCAG-GATCGGAAGCAGCTCTTTGAGGAGACCATCAGCAAGTTTGGAA-AGCTCAATAT-TCTCATTAGCAACGCCGCCACCAACCCCGCCGTGGGCGGAGTGCTCGAGTGTGACGAGA
droFic1	scf7180000453833:285401-285641 +		TTGGCCGAAGATGGTGCTTCGGTAGTCATCAGCAGCCGAAAGCAAAAGAACGTGGACTCTGCTCTAGCGGAGCTGCGCAAATTGAACCTTAATGTGCACGGACTCAAGTGCCATGTTAGTGAGCCGCAG-GACCGCAAGCAGCTCTTCGAGGAAACTATCAGCAAGTTTGGCA-AGCTCAATAT-CCTAGTCAGTAACGCCGCCACTAATCCTGCGGTGGGTGGAGTCCTTGAGTGCGACGAAA
droEle1	scf7180000491268:581023-581263 -		TTGGCAGAAGATGGCGCTTCGGTGGTCATCAGCAGTCGGAAGCAAAAGAACGTGGACTCTGCTCTGGCGGAGCTGCGCAAACTGAACCTCAATGTCCACGGACTCAAGTGCCATGTGAGCGAGCCCCAG-GATCGCAAGCAGCTCTTCGAGGAAACCATCAGCAAGTTTGGAA-AACTCAATAT-TCTGGTCAGCAATGCCGCTACCAATCCGGCGGTGGGTGGAGTCCTCGAATGCGACGAGA
droRho1	scf7180000765557:34427-34667 +		TTAGCAGAAGATGGCGCTTCGGTGGTCATCAGCAGTCGGAAGCAGAAGAACGTGGACTCTGCTCTGGCGGAGCTGCGCAAATTGAACCTCAATGTCCACGGGCTCAAATGCCATGTAAGCGAGCCCCAG-GATCGCAAGCAGCTCTTCGAGGAAACTATTAGCAAGTTTGGCA-AACTCAATAT-TCTGGTCAGCAATGCCGCCACCAATCCGGCGGTGGGTGGAGTCCTCGAGTGCGACGAGA
droBia1	scf7180000302428:1849378-1849618 +		CTGGCCGAAGACGGCGCTGCCGTGGTCATCAGCAGTCGGAAGCAAAAGAACGTGGACTCTGCTCTGGCGGAGCTGCGTAGGCTAAACCTCAATGTCCATGGCCTCAAGTGCCATGTCAGCGAGCCGCAG-GATCGCAAACAGCTCTTCGAGGAGACCATCAGCAAGTTTGGCA-AACTTAACAT-CCTAGTCAGCAATGCCGCCACCAATCCTGCCGTCGGCGGAGTCCTGGAGTGCGACGAAA
droTak1	scf7180000415157:280897-281137 -		CTGGCCGAAGATGGCGCCTCGGTGGTCATCAGCAGTCGCAAGCAAAAGAATGTGGACTCTGCTCTGGCGGAGCTGCGCAAGCTGAACCTCAATGTCCACGGACTCAAGTGCCATGTCAGCGAACCGGAG-GATCGCAAACAGCTCTTTGAGCAAACGATCAGCAAGTTTGGCA-AGCTGAACAT-CCTGGTCAGCAATGCGGCCACCAATCCTGCCGTCGGCGGAGTCCTCGAATGCGACGAAA
droEug1	scf7180000409466:2891331-2891571 -		CTGGCCGAAGATGGAGCTTCGGTGGTCATCAGCAGTCGAAAGCAAAAGAATGTGGACTCTGCTCTGGCGGAGCTCCGAAAATTGAACCTCAATGCTCATGGACTCAAGTGCCATGTAGGCGATGCCCAA-GACCGAAAGCAGCTCTTCGAGGAGACCATCAGCAAGTTTGGAA-AGCTTAATAT-TCTGGTCAGCAATGCTGCCACCAACCCTGCAGTAGGTGGAGTCTTGGAGTGCGACGAGA
dm3	chr3L:5134077-5134317 -		CTGGCCGAAGATGGCGCCGCAGTGGTCATCAGCAGTCGCAAGCAAAAGAATGTGGACTCTGCTCTGGCGGAGCTGCGCAAACTGAACTTGAATGTCCACGGTCTGAAGTGCCATGTCAGCGAACCCGAG-GATCGCAAACAGCTCTTTGAGGAGACCATTAGCAAGTTTGGCA-AGCTCAACAT-TCTGGTCAGCAATGCAGCCACCAATCCTGCGGTCGGCGGTGTCCTCGAGTGCGATGAGA
droSim2	3l:5065076-5065316 -		CTGGCCGAAGATGGCGCCGCAGTGGTCATCAGCAGTCGCAAGCAGAAGAATGTGGACTCTGCTCTGGCGGAGCTGCGCAAACTGAACTTGAATGTCCACGGACTGAAGTGCCATGTCAGCGAACCGGAG-GATCGCAAGCAGCTCTTCGAGGAGACCATCAGCAAGTTTGGCA-AGCTGAACAT-TCTGGTCAGCAATGCTGCCACCAATCCTGCTGTGGGCGGTGTCCTGGAGTGCGACGAGA
droSec2	scaffold_2:5086164-5086404 -		CTGGCCGAAGATGGCGCCGCAGTGGTCATCAGCAGTCGCAAGCAAAAGAATGTGGACTCTGCTCTGGCGGAGCTGCGCAAACAGAACTTGAATGTCCACGGACTGAAGTGCCATGTCAGCGAACCCGAG-GATCGCAAACAGCTCTTCGAGGAGACCATAAGCAAGTTTGGCA-AGCTGAACAT-TCTGGTCAGCAATGCCGCCACCAATCCTGCGGTCGGCGGTGTCCTCGAGTGCGACGAGA
droYak3	3L:5695483-5695723 -		CTGGCCGAAGATGGTGCCGCAGTGGTCATCAGCAGTCGCAAGCAAAAGAATGTGGACTCTGCTCTGGCGGAGCTGCGAAAACTAAACTTGAATGTCCACGGCTTGAAGTGCCATGTCAGCGAGCCCGAG-GATCGCAAACAGCTCTTCGCGGAGACAATCAGCAAGTTTGGCA-AGCTGAACAT-TCTGGTCAGCAATGCCGCCACCAATCCTGCGGTGGGCGGCGTTCTCGAGTGCGACGAAA
droEre2	scaffold_4784:7827020-7827260 -		CTGGCCGAAGATGGCGCCGCAGTGGTAATCAGCAGTCGCAAGCAAAAAAATGTGGACTCTGCTCTGGCGGAGCTGCGAAAACTGAACTTGAATGTCCATGGATTGAAGTGTCATGTCAGCGAACCCGAG-GATCGCAAACAGCTCTTCGCGGAGACGATCAGCAAGTTTGGCA-AGCTGAACAT-TCTGATCAGCAATGCCGCCACCAATCCAGCGGTGGGCGGAGTCCTCGAGTGCGACGAAA

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droPer2

CTAGCAGAAGATGGAGCCGCCGTGGTCATCAGCAGTCGCAAGCA-AAGAACGTGGACAATGCCCTGGCGGAGCTGCGCAAATTGAATCTGAATGTGCACGGCCTGAAATGTCACGTGAGCGAGCCGCAGGGATCGCAAACAGCTCTTCGATGAAACCATCAGCAAGTACGGAAAAGCTCAATATATTTAGTTAGCAACGCTGCCACAAACCCCGCCGTAGGTGGAGTCCTGGATTGCGATGAGA	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
................................................................................ATTGAATCTGAATGTGCACGG...............................................................................................................................................	21	1	2.00	2	2	0	0	0	0	0
............................................................................................................................................................................................................ACAAACCCCGCCGTAGGTGGA...................	21	1	2.00	2	0	0	2	0	0	0
...............................................................................................GCACGGCCTGAAATGTCACGT................................................................................................................................	21	1	2.00	2	2	0	0	0	0	0
.........GATGGAGCCGCCGTGGTCATCAGC...................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0
.............................................AAGAACGTGGACAATGCCCTGGC................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0
.............................................................................................................................................................................................GTTAGCAACGCTGCCACAAACCCCGC.............................	26	1	1.00	1	0	1	0	0	0	0
............................................................................................TGTGCACGGCCTGAAATGTCACGTGAGC............................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
..........ATGGAGCCGCCGTGGTCATCAGCAGTCG..............................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	1
...............................................................................AATTGAATCTGAATGTGCAC.................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
........................GTCATCAGCAGTCGCAAGC.........................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
................................................................................ATTGAATCTGAATGTGCAC.................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
...............................................................................................................CACGTGAGCGAGCCGCAGGATC...............................................................................................................	22	1	1.00	1	0	0	1	0	0	0
...............................................................................................................CACGTGAGCGAGCCGCAGGA.................................................................................................................	20	1	1.00	1	0	0	0	0	0	1
........AGATGGAGCCGCCGTGGTCATCAGCA..................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	1
............................................................................................................................................................CATCAGCAAGTACGGAAAGCT...................................................................	21	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................GCAAACAGCTCTTCGATGAAAC........................................................................................	22	1	1.00	1	0	0	1	0	0	0
.....AGAAGATGGAGCCGCCGTGGT..........................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0
......GAAGATGGAGCCGCCGTGGT..........................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1

dp5

CTAGCAGAAGATGGAGCCGCCGTGGTCATCAGCAGTCGCAAGCAAAAGAACGTGGACAATGCCCTGGCGGAGCTGCGCAAATTGAATCTGAATGTGCACGGCCTGAAATGTCACGTGAGCGAGCCGCAG-GATCGCAAACAGCTCTTCGATGAAACCATCAGCAAGTACGGAA-AGCTCAATAT-ATTAGTTAGCAACGCTGCCACAAACCCCGCCGTAGGTGGAGTCCTGGATTGCGATGAGA	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.............................................................................................................................................................................................GTTAGCAACGCTGCCACAAACCCCGC.............................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0
...................................................................................................GGCCTGAAATGTCACGTGAGCGAGC........................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................GCCCTGGCGGAGCTGCGCA.....................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................AATGTCACGTGAGCGAGCCGCAG-GAT...............................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....AGAAGATGGAGCCGCCGTGGTC.........................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................AAACCCCGCCGTAGGTGGAGTCCTGGATC.........	29	1	1.00	1	0	0	1	0	0	0	0	0	0	0
............................................................................................................TGTCACGTGAGCGAGCCGCAG-GA................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................CAAGTACGGAA-AGCTCAATAT-ATTAGT.....................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	1	0
...................................................GTGGACAATGCCCTGGCGGAGC...........................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	1	0
.................................AGTCGCAAGCAAAAGAACGTGGACA..........................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....AGAAGATGGAGCCGCCGTGGTCATCAGC...................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................AAGTACGGAA-AGCTCAATAT-ATT........................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................................................CTGGCGGAGCTGCGCAAATT.................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................................................................AGCTGCGCAAATTGAATCTGAATGT.....................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................................GGCGGAGCTGCGCAAATTG................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......GAAGATGGAGCCGCCGTGGT..........................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................................GAACGTGGACAATGCCCTG..................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	1	0
..............................................................................................................TCACGTGAGCGAGCCGCAG-..................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................AGCAAAAGAACGTGGACAATGCCCT...................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	1	0	0	0	0	0
........................................................................................................................GAGCCGCAG-GATCGCAAACAGCT....................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................ACGTGAGCGAGCCGCAG-G.................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................CGAGCCGCAG-GATCGCAAACAGCT....................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................AGAACGTGGACAATGCCCTG..................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................CGTGGACAATGCCCTGGCGGAGC...........................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................ACGGCCTGAAATGTCACGTGAGC............................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................TGTCACGTGAGCGAGCCGCAG-GATCGCA...........................................................................................................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0
.....................................................................................ATCTGAATGTGCACGGCCTGAA.........................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......AAGATGGAGCCGCCGTGGTCATC......................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0
................................................................................................................................................................................................AGCAACGCTGCCACAAACCCCGC.............................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................GCCGTAGGTGGAGTCCTGGATTGC.......	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................TTAGTTAGCAACGCTGCCACAAACCC................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................TCATCAGCAGTCGCAAGCAAAAGAA..................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................TAGTTAGCAACGCTGCCACAAACCCC...............................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0
................................................................................................................................................................................................................ACCCCGCCGTAGGTGGAGTCCTGGATT.........	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................CAAGTACGGAA-AGCTCAATAT-...........................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0

droWil2

CTAGCGGAGGACGGAGCAGCCGTGGTTATTAGCAGCCGTAAGCAAAAAAATGTGGATAATGCCTTAGCCGAGCTAAGGAAACTTAATCTTAATGTTCATGG-CTGAAATGTCATGTTAGTGACGCTCAG-GATCGGAAGGAGTTGTTTGAACAAACCATTAGTAAATATGGCA-AATTGAATAT-ATTGATTAGCAATGCCGCCACCAATCCGGCAGTGGGTGGCGTCCTCGAATGTGATGAAC	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
.................................................................AGCCGAGCTAAGGAAACTTAAT.............................................................................................................................................................	22	1	3.00	3	0	0	1	2	0
.................................................................................CTTAATCTTAATGTTCATGG-CCT...........................................................................................................................................	23	1	2.00	2	0	0	0	2	0
....................................................................................................................................................................................ATAT-ATTGATTAGCAATGCCGCCACC.....................................	26	1	1.00	1	0	0	0	1	0
................................................................................................................................................................................TTGAATAT-ATTGATTAGCAAT..............................................	21	1	1.00	1	0	0	0	1	0
...........................................................................................................................................................................................TGATTAGCAATGCCGCCACCAATCCGGCA............................	29	1	1.00	1	0	0	0	1	0
......................................................................................................................................................................................................................CAGTGGGTGGCGTCCTCGAAT.........	21	1	1.00	1	0	0	0	1	0
........................................................................................................................GACGCTCAG-GATCGGAAGGAG......................................................................................................	21	1	1.00	1	1	0	0	0	0
....CGGAGGACGGAGCAGCCGTGGT..........................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0
....................................................................................................................TAGTGACGCTCAG-GATCGGAAGGAGT.....................................................................................................	26	1	1.00	1	0	1	0	0	0
..................................................................................................................................................................................GAATAT-ATTGATTAGCAATGCCG..........................................	23	1	1.00	1	0	0	0	1	0
.................................................ATGTGGATAATGCCTTAGCCGT.............................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0
............................................................................................................................................................................................................................GTGGCGTCCTCGAATGTGATG...	21	1	1.00	1	0	1	0	0	0
........................................................................................................................GACGCTCAG-GATCGGAAGGAGTTGT..................................................................................................	25	1	1.00	1	0	0	0	1	0
............GGAGCAGCCGTGGTTATTAGCAGCC...............................................................................................................................................................................................................	25	1	1.00	1	0	0	0	1	0
........................GTTATTAGCAGCCGTAAGCAAAA.....................................................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0
.......................................................................................................................................................................................................................AGTGGGTGGCGTCCTCGAAT.........	20	1	1.00	1	0	0	1	0	0
................................................................................................................................G-GATCGGAAGGAGTTGTTTGA..............................................................................................	21	1	1.00	1	0	1	0	0	0
........................................................................................................GAAATGTCATGTTAGTGA..........................................................................................................................	18	1	1.00	1	0	0	0	1	0
...................................................................................TAATCTTAATGTTCATGG-CCT...........................................................................................................................................	21	1	1.00	1	0	0	0	1	0
........................................................................................................................................................................................................CGCCACCAATCCGGCAGTGGGT......................	22	1	1.00	1	0	0	1	0	0
CTAGCGGAGGACGGAGCAGCCGT.............................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0
.......................................................................................................................TGACGCTCAG-GATCGGAAGG........................................................................................................	20	1	1.00	1	0	1	0	0	0
...............................................................................................................................................................TAGTAAATATGGCA-AATTGA................................................................	20	1	1.00	1	0	1	0	0	0
..................GCCGTGGTTATTAGCAGCCGTAAGC.........................................................................................................................................................................................................	25	1	1.00	1	0	0	0	1	0
......................................................................................................................................................................................AT-ATTGATTAGCAATGCCGC.........................................	20	1	1.00	1	0	0	0	1	0
................................................................TAGCCGAGCTAAGGAAACTTAAT.............................................................................................................................................................	23	1	1.00	1	0	0	0	1	0
.......................................................................................................................................GAAGGAGTTGTTTGAACA...........................................................................................	18	1	1.00	1	0	0	0	1	0
CTAGCGGAGGACGGAGCAGCCGTGGA..........................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	1	0
..........................................................................................................................CGCTCAG-GATCGGAAGGAGTTGT..................................................................................................	23	1	1.00	1	0	0	0	1	0
........................................................................................................................................................................................................................GTGGGTGGCGTCCTCGAAT.........	19	1	1.00	1	0	0	0	1	0
.........................................................................................................................................................................................................................TGGGTGGCGTCCTCGAATGTGA.....	22	1	1.00	1	0	0	1	0	0
........................GTTATTAGCAGCCGTAAGCAAA......................................................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0

droVir3

TTGGCTGAGGATGGTGCAGCCGTCGTGATCAGCAGTCGAAAGCAGAAGAATGTGGACAATGCGCTTGCCGAGCTGCGTAAACTGAATCTTAACGTGCATGGCCTGAAGTGCCACGTGAGCGAGCCGCAA-GATCGTAAGCAGCTCTTCGAGGAAACCATCAGCAAATATGGCA-AGCTCAACAT-ATTGGTTAGTAATGCCGCTACCAATCCTGCCGTGGGCGGTGTTCTGGAATGTGATGAGA	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
.........................................................................................................................................................................................................GCTACCAATCCTGCCGTGGGCGGT...................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
........................................................................................................GAAGTGCCACGTGAGCGAGCC.......................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...........................................AGAAGAATGTGGACAATGC......................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
......................................................................................................................................GTAAGCAGCTCTTCGAGGA...........................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
..................................................................................................................GTGAGCGAGCCGCAA-GAT...............................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................ATGTGGACAATGCGCTTGCC...............................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................AGAATGTGGACAATGCGCTTGC................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................GCCGTGGGCGGTGTTCTGGA...........	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
.......................................................................................................................................................................................T-ATTGGTTAGTAATGCCGCT........................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................ATCCTGCCGTGGGCGGTGTTCTGGA...........	25	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TGTGGACAATGCGCTTGCCG..............................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................CAGAAGAATGTGGACAATGCGCT...................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................CCAATCCTGCCGTGGGCGGTG..................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................GCAGAAGAATGTGGACAATGCGC....................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................ATCGTAAGCAGCTCTTCGAGGAAAC........................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................CTGAAGTGCCACGTGAGCGAGCC.......................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.................................................................TGCCGAGCTGCGTAAACTGAATCTTAAC.......................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...................................................GTGGACAATGCGCTTGCCGAG............................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................GTCGAAAGCAGAAGAATGT...............................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................TGCCGAGCTGCGTAAACTGAAT.............................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..............TGCAGCCGTCGTGATCAGCAGTC...............................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..............................................................................AAACTGAATCTTAACGTGCATGGC..............................................................................................................................................	24	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................GTCGTGATCAGCAGTCGAAA...........................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................GGACAATGCGCTTGCCGAGCTGCGTAAAC..................................................................................................................................................................	29	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................GAAAGCAGAAGAATGTGGA............................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................AGAATGTGGACAATGCGCTTG.................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..............................................................................................................................................................................................................................GGTGTTCTGGAATGTGAT....	18	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................AAGCAGAAGAATGTGGACAATGCG.....................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................CAGAAGAATGTGGACAATGCGC....................................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................AGCAGAAGAATGTGGACAATGC......................................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................TTGCCGAGCTGCGTAAACTGA...............................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................TACCAATCCTGCCGTGGG.......................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................GTGAGCGAGCCGCAA-GATCG.............................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.....................................................GGACAATGCGCTTGCCGAG............................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................TGCCGCTACCAATCCTGCCGT..........................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................GACAATGCGCTTGCCGAGCT..........................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
............................................................................................................................................................................................................ACCAATCCTGCCGTGGGCGGT...................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................GAGGAAACCATCAGCAAATATGGCA-......................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................AATGCGCTTGCCGAGCTGCGTAAA...................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................ACAT-ATTGGTTAGTAATGCCGCTAC......................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................GTCGTGATCAGCAGTCGAAAG..........................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................ATGCGCTTGCCGAGCTGCGTA.....................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................CTTGCCGAGCTGCGTAAACTG................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
......................................................................................................CTGAAGTGCCACGTGAGCGAGCCGC.....................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................GATCAGCAGTCGAAAGCAGA......................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................CTTCGAGGAAACCATCAGCAAATATGGC........................................................................	28	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................TCTTAACGTGCATGGCCTGA..........................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................GAGCGAGCCGCAA-GATCGTAAGCAGCT....................................................................................................	27	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................GGCCTGAAGTGCCACGTGAGCGAGC........................................................................................................................	25	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................AAGAATGTGGACAATGCGCTTGCCG..............................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

TTGGCTGAGGATGGCGCTGCGGTGGTCATCAGCAGCCGCAAGCAAAAGAATGTGGACAATGCCCTTGCCGAGCTGCGCAAACTGAATCTTAATGTGCATGGACTCAAGTGCCACGTGAGCGAAGCGCAA-GATCGCAAGCAGCTCTTCGAGGAGACCATCAGCAAATATGGCA-AGCTAAACAT-TTTGGTTAGTAATGCTGCTACTAATCCTGCCGTTGGCGGCGTGCTGGAATGCGATGAGA	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
.................................................................................CTGAATCTTAATGTGCATG................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
............GGCGCTGCGGTGGTCATCAGCA..................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
........................................................................................................CAAGTGCCACGTGAGCGAAGC.......................................................................................................................	21	1	1.00	1	0	0	0	0	0	1
..............................................................CCTTGCCGAGCTGCGCAAACTG................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
...........TGGCGCTGCGGTGGTCATCAG....................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
............GGCGCTGCGGTGGTCATCA.....................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
...................................................................................................GGACTCAAGTGCCACGTGAGCGAAG........................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
......................................................................................................CTCAAGTGCCACGTGAGCGAAGC.......................................................................................................................	23	1	1.00	1	0	0	0	0	0	1
..........................................................................................AATGTGCATGGACTCAAGTG......................................................................................................................................	20	1	1.00	1	0	0	0	1	0	0

droGri2

TTGGCTGAGGATGGTGCCTCCGTTGTTATAAGCAGTCGGAAGCAAAAGAACGTGGACAATGCGCTTGCCGAGCTACGCAAATTGAATCTGAATGTGCATGGCCTCAAGTGCCATGTGGCCGAGCCGCAG-GATCGCAAGCAGTTGTTCGAGGAGACCATTAGCAAGTATGGCA-AACTCAATAT-TTTGATTAGTAATGCCGCCACGAATCCTGCTGTGGGCGGTGTGATGGACTGCGACGAGA	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
.....................................................................................................CCTCAAGTGCCATGTGGCCGAGCCG......................................................................................................................	25	1	1.00	1	1	0
................................................AACGTGGACAATGCGCTTGCCGA.............................................................................................................................................................................	23	1	1.00	1	0	1
...................................................................................................................................................................................................................CTGCTGTGGGCGGTGTGATGG............	21	1	1.00	1	0	1
.........................................................................................GAATGTGCATGGCCTCAAGTGCCA...................................................................................................................................	24	1	1.00	1	1	0

droAna3

TTGGCTGAGGATGGAGCTGCAGTGGTCATCAGCAGCCGGAAACAGAAGAACGTGGATAACGCTTTGGCGGAGCTCCGAAAACTAAACCTCAACGTGCATGGACTGAAGTGTCATGTTGGAGAAGCCCAG-GACCGCAAACAGCTCTTCGAGGAGACCATCAGCAAGTTCGGCA-AGCTGAACAT-TCTGGTCAGTAACGCGGCCACCAACCCCGCAGTGGGTGGTGTCCTGGAGTGCGACGAAA	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
.................................................................................................................................................................................................................CCCCGCAGTGGGTGGTGTCCT..............	21	1	1.00	1	1	0	0	0	0	0
....................................CGGAAACAGAAGAACGTGG.............................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0
.........................................................................................................................................................................GGCA-AGCTGAACAT-TCTG.......................................................	18	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................................................GAGACCATCAGCAAGTTCGGCA-......................................................................	22	1	1.00	1	0	1	0	0	0	0
........GGATGGAGCTGCAGTGGTCATCA.....................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0
..................................................................................................................GTTGGAGAAGCCCAG-GACCGC............................................................................................................	21	1	1.00	1	1	0	0	0	0	0
.........................................................................................................................................................................GGCA-AGCTGAACAT-TCTGGC.....................................................	20	1	1.00	1	0	1	0	0	0	0
.................................................................................................................................................................GCAAGTTCGGCA-AGCTGAA...............................................................	19	1	1.00	1	0	0	0	0	1	0
..................................GCCGGAAACAGAAGAACGTGGATAAC........................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0
........................................................................................................................................................................................................................GTGGGTGGTGTCCTGGAG..........	18	1	1.00	1	0	0	0	1	0	0
...............................................................................................................................................................CAGCAAGTTCGGCA-AGCTGAACA.............................................................	23	1	1.00	1	0	0	0	0	0	1
.........................................................................................................................................................GACCATCAGCAAGTTCGGCA-AGC...................................................................	23	1	1.00	1	0	0	0	0	1	0
................................................................................................................................G-GACCGCAAACAGCTCTTCG...............................................................................................	20	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................................................GTGGGTGGTGTCCTGGAGTGC.......	21	1	1.00	1	0	0	0	0	1	0
.........................................................................................................................................................GACCATCAGCAAGTTCGGCA-AGCT..................................................................	24	1	1.00	1	0	1	0	0	0	0
...............................................................................................................CATGTTGGAGAAGCCCAG-GACCGCAAAC........................................................................................................	28	1	1.00	1	1	0	0	0	0	0
...............................................GAACGTGGATAACGCTTTGGCGG..............................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0
...............................................................................................GCATGGACTGAAGTGTCATGTTGGAGAA.........................................................................................................................	28	1	1.00	1	0	0	0	0	1	0
.....TGAGGATGGAGCTGCAGTGGT..........................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................GTGTCCTGGAGTGCGACGA..	19	1	1.00	1	1	0	0	0	0	0
......................................................................................CCTCAACGTGCATGGACT............................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................GGAGACCATCAGCAAGTTCGG.........................................................................	21	1	1.00	1	1	0	0	0	0	0
.................................................ACGTGGATAACGCTTTGGCGG..............................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0
............................................................................................................................................AGCTCTTCGAGGAGACCATC....................................................................................	20	2	0.50	1	1	0	0	0	0	0

droBip1

TTGGCTGAGGATGGAGCTGCCGTGGTCATCAGCAGCCGAAAGCAGAAGAACGTGGATAACGCTTTGGCAGAACTGCGAAAACTGAACCTTAACGTGCACGGGCTGAAGTGTCATGTAGGCGAAGCTCAG-GACCGCAAACAGCTCTTCGAGGAGACCATCAGCAAGTTCGGCA-AGCTCAACAT-TTTGGTCAGCAACGCAGCCAGCAACCCAGCAGTGGGCGGTGTCCTGGAGTGCGATGAAA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

TTGGCCGAGGACGGAGCCGCCGTGGTCATTAGCAGCCGGAAACAAAAGAACGTGGACAACGCTCTGGCGGAGCTGCGCAAGCTGAACCTAAATGTCCATGGACTCAAGTGTCACGTGAGCGAGCCCCAG-GATCGGAAGCAGCTCTTTGAGGAGACCATCAGCAAGTTTGGAA-AGCTCAATAT-TCTCATTAGCAACGCCGCCACCAACCCCGCCGTGGGCGGAGTGCTCGAGTGTGACGAGA	Size	Hit Count	Total Norm	Total
No Reads

droFic1

TTGGCCGAAGATGGTGCTTCGGTAGTCATCAGCAGCCGAAAGCAAAAGAACGTGGACTCTGCTCTAGCGGAGCTGCGCAAATTGAACCTTAATGTGCACGGACTCAAGTGCCATGTTAGTGAGCCGCAG-GACCGCAAGCAGCTCTTCGAGGAAACTATCAGCAAGTTTGGCA-AGCTCAATAT-CCTAGTCAGTAACGCCGCCACTAATCCTGCGGTGGGTGGAGTCCTTGAGTGCGACGAAA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

TTGGCAGAAGATGGCGCTTCGGTGGTCATCAGCAGTCGGAAGCAAAAGAACGTGGACTCTGCTCTGGCGGAGCTGCGCAAACTGAACCTCAATGTCCACGGACTCAAGTGCCATGTGAGCGAGCCCCAG-GATCGCAAGCAGCTCTTCGAGGAAACCATCAGCAAGTTTGGAA-AACTCAATAT-TCTGGTCAGCAATGCCGCTACCAATCCGGCGGTGGGTGGAGTCCTCGAATGCGACGAGA	Size	Hit Count	Total Norm	Total
No Reads

droRho1

TTAGCAGAAGATGGCGCTTCGGTGGTCATCAGCAGTCGGAAGCAGAAGAACGTGGACTCTGCTCTGGCGGAGCTGCGCAAATTGAACCTCAATGTCCACGGGCTCAAATGCCATGTAAGCGAGCCCCAG-GATCGCAAGCAGCTCTTCGAGGAAACTATTAGCAAGTTTGGCA-AACTCAATAT-TCTGGTCAGCAATGCCGCCACCAATCCGGCGGTGGGTGGAGTCCTCGAGTGCGACGAGA	Size	Hit Count	Total Norm	Total
No Reads

droBia1

CTGGCCGAAGACGGCGCTGCCGTGGTCATCAGCAGTCGGAAGCAAAAGAACGTGGACTCTGCTCTGGCGGAGCTGCGTAGGCTAAACCTCAATGTCCATGGCCTCAAGTGCCATGTCAGCGAGCCGCAG-GATCGCAAACAGCTCTTCGAGGAGACCATCAGCAAGTTTGGCA-AACTTAACAT-CCTAGTCAGCAATGCCGCCACCAATCCTGCCGTCGGCGGAGTCCTGGAGTGCGACGAAA	Size	Hit Count	Total Norm	Total
No Reads

droTak1

CTGGCCGAAGATGGCGCCTCGGTGGTCATCAGCAGTCGCAAGCAAAAGAATGTGGACTCTGCTCTGGCGGAGCTGCGCAAGCTGAACCTCAATGTCCACGGACTCAAGTGCCATGTCAGCGAACCGGAG-GATCGCAAACAGCTCTTTGAGCAAACGATCAGCAAGTTTGGCA-AGCTGAACAT-CCTGGTCAGCAATGCGGCCACCAATCCTGCCGTCGGCGGAGTCCTCGAATGCGACGAAA	Size	Hit Count	Total Norm	Total
No Reads

droEug1

CTGGCCGAAGATGGAGCTTCGGTGGTCATCAGCAGTCGAAAGCAAAAGAATGTGGACTCTGCTCTGGCGGAGCTCCGAAAATTGAACCTCAATGCTCATGGACTCAAGTGCCATGTAGGCGATGCCCAA-GACCGAAAGCAGCTCTTCGAGGAGACCATCAGCAAGTTTGGAA-AGCTTAATAT-TCTGGTCAGCAATGCTGCCACCAACCCTGCAGTAGGTGGAGTCTTGGAGTGCGACGAGA	Size	Hit Count	Total Norm	Total
No Reads

dm3

CTGGCCGAAGATGGCGCCGCAGTGGTCATCAGCAGTCGCAAGCAAAAGAATGTGGACTCTGCTCTGGCGGAGCTGCGCAAACTGAACTTGAATGTCCACGGTCTGAAGTGCCATGTCAGCGAACCCGAG-GATCGCAAACAGCTCTTTGAGGAGACCATTAGCAAGTTTGGCA-AGCTCAACAT-TCTGGTCAGCAATGCAGCCACCAATCCTGCGGTCGGCGGTGTCCTCGAGTGCGATGAGA	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.....................GTGGTCATCAGCAGTCGCAAGC.........................................................................................................................................................................................................	22	1	9.00	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9
..........................................................................................AATGTCCACGGTCTGAAGTGC.....................................................................................................................................	21	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................AGTGGTCATCAGCAGTCGCAAGCAAAA.....................................................................................................................................................................................................	27	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................GTCCACGGTCTGAAGTGCCATGTC...............................................................................................................................	24	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0
...........................................................................................................................................................................................................CACCAATCCTGCGGTCGGCGGT...................	22	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................CAGCCACCAATCCTGCGGTCG........................	21	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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................................................AATGTGGACTCTGCTCTGGCGGA.............................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................AGCTCTTTGAGGAGACCATTAGC.................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................TCCTGCGGTCGGCGGTGTCCTCGAG..........	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
.......................................AAGCAAAAGAATGTGGAC...........................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................TGAAGTGCCATGTCAGCGA..........................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................ATCCTGCGGTCGGCGGTGTCCTCGA...........	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................GGTCATCAGCAGTCGCAAG..........................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................GCGCAAACTGAACTTGAATGT.....................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................ACTTGAATGTCCACGGTCT............................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

CTGGCCGAAGATGGCGCCGCAGTGGTCATCAGCAGTCGCAAGCAGAAGAATGTGGACTCTGCTCTGGCGGAGCTGCGCAAACTGAACTTGAATGTCCACGGACTGAAGTGCCATGTCAGCGAACCGGAG-GATCGCAAGCAGCTCTTCGAGGAGACCATCAGCAAGTTTGGCA-AGCTGAACAT-TCTGGTCAGCAATGCTGCCACCAATCCTGCTGTGGGCGGTGTCCTGGAGTGCGACGAGA	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.......................................................................GCTGCGCAAACTGAACTTGAA........................................................................................................................................................	21	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................AATGTGGACTCTGCTCTGGCGGA.............................................................................................................................................................................	23	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................TGAACAT-TCTGGTCAGCAATG.............................................	21	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................GACCATCAGCAAGTTTGGCA-AGCTG.................................................................	25	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................AATGTGGACTCTGCTCTGGCGGAGC...........................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.......................................AAGCAGAAGAATGTGGACTCTG.......................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................TGAATGTCCACGGACTGAAGTGC.....................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
...........................................................TGCTCTGGCGGAGCTGCGCAAACTGAA..............................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
................................................................................................CACGGACTGAAGTGCCATGTC...............................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................CGGACTGAAGTGCCATGTCAGCGAACC.......................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
..................................................................................................CGGACTGAAGTGCCATGTCAGC............................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................GAACAT-TCTGGTCAGCAAT..............................................	19	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................GCTGCGCAAACTGAACTTGAAT.......................................................................................................................................................	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................AAACTGAACTTGAATGTC....................................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................GAAGAATGTGGACTCTGCTCTGGCGGAGC...........................................................................................................................................................................	29	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................TTGAATGTCCACGGACTGAAGTGCCA...................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.................................................ATGTGGACTCTGCTCTGGCGGAGCTG.........................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..............................................AGAATGTGGACTCTGCTCTGGCGG..............................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
................................................................................................CACGGACTGAAGTGCCATGTCAGC............................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................AAGAATGTGGACTCTGCTCTGGCGGA.............................................................................................................................................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................GCTGCGCAAACTGAACTTGAATG......................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
..........................................................................................................................................................ACCATCAGCAAGTTTGGCA-AGCTGAAC..............................................................	27	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................GTGGACTCTGCTCTGGCGGAGCTGCGC......................................................................................................................................................................	27	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................GAAGAATGTGGACTCTGCTCTGGC................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................GAAGAATGTGGACTCTGCT.....................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................ATGTGGACTCTGCTCTGGCGGA.............................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
...............................................GAATGTGGACTCTGCTCTGGC................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.............................................AAGAATGTGGACTCTGCTCTGGCGGAGC...........................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.........................................GCAGAAGAATGTGGACTCTG.......................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................TGAACTTGAATGTCCACGGACTGAAG........................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
..................................................TGTGGACTCTGCTCTGGCGGAGCTGC........................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................AATCCTGCTGTGGGT......................	15	7	0.29	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0

droSec2

CTGGCCGAAGATGGCGCCGCAGTGGTCATCAGCAGTCGCAAGCAAAAGAATGTGGACTCTGCTCTGGCGGAGCTGCGCAAACAGAACTTGAATGTCCACGGACTGAAGTGCCATGTCAGCGAACCCGAG-GATCGCAAACAGCTCTTCGAGGAGACCATAAGCAAGTTTGGCA-AGCTGAACAT-TCTGGTCAGCAATGCCGCCACCAATCCTGCGGTCGGCGGTGTCCTCGAGTGCGACGAGA	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
...........................................................................................................................................................................................................CACCAATCCTGCGGTCGGC......................	19	1	3.00	3	0	0	3	0
...................................................GTGGACTCTGCTCTGGCGGAGCT..........................................................................................................................................................................	23	1	3.00	3	0	0	3	0
......................................................................................................CTGAAGTGCCATGTCAGC............................................................................................................................	18	1	2.00	2	0	0	2	0
.....CGAAGATGGCGCCGCAGTG............................................................................................................................................................................................................................	19	1	2.00	2	0	0	2	0
..................................................................................................................................................................................GAACAT-TCTGGTCAGCAATGCCGC.........................................	24	1	2.00	2	0	0	2	0
....................................................................................................................................................................................ACAT-TCTGGTCAGCAATGCCGC.........................................	22	1	1.00	1	0	0	1	0
.................CGCAGTGGTCATCAGCAGTC...............................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0
...............................................................................................CCACGGACTGAAGTGCCATGTCAGC............................................................................................................................	25	1	1.00	1	0	0	1	0
................................................................................................................................................................................................................ATCCTGCGGTCGGCGGTGTCCT..............	22	1	1.00	1	0	0	0	1
...................CAGTGGTCATCAGCAGTC...............................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1
...............GCCGCAGTGGTCATCAGCAGTCGC.............................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0
...........................................................................................................................................................................................................CACCAATCCTGCGGTCGGCGGTGTCCT..............	27	1	1.00	1	0	0	1	0
...............GCCGCAGTGGTCATCAGCAGTC...............................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0
............................................................................................................................................................................................................ACCAATCCTGCGGTCGGCG.....................	19	1	1.00	1	0	0	1	0
.....CGAAGATGGCGCCGCAGTGGTCAT.......................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0
...........................................................TGCTCTGGCGGAGCTGCGCAAACAGA...............................................................................................................................................................	26	1	1.00	1	0	0	1	0
..............................................................................................................................................................TAAGCAAGTTTGGCA-AGCTGAACA.............................................................	24	1	1.00	1	1	0	0	0
.....CGAAGATGGCGCCGCAGT.............................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0
.......................................................................................................................................CAAACAGCTCTTCGAGGA...........................................................................................	18	1	1.00	1	0	0	1	0
.......................................................ACTCTGCTCTGGCGGAGCTGCGC......................................................................................................................................................................	23	1	1.00	1	0	0	1	0
..................................................................................................................GTCAGCGAACCCGAG-GATCGCA...........................................................................................................	22	1	1.00	1	1	0	0	0
............................................AAAGAATGTGGACTCTGCTCTGGCGGA.............................................................................................................................................................................	27	1	1.00	1	0	0	1	0
..............................................................................AAACAGAACTTGAATGTCCAC.................................................................................................................................................	21	1	1.00	1	0	1	0	0
.................................................ATGTGGACTCTGCTCTGGCGGA.............................................................................................................................................................................	22	1	1.00	1	0	1	0	0
..............................................................................................................................................................................................................................GGTGTCCTCGAGTGCGACGA..	20	1	1.00	1	0	1	0	0
.................................AGTCGCAAGCAAAAGAATGTGGA............................................................................................................................................................................................	23	1	1.00	1	0	0	1	0
.....................................................................................................................................CGCAAACAGCTCTTCGAGGAGACCAT.....................................................................................	26	1	1.00	1	1	0	0	0
........................................................................................................................................AAACAGCTCTTCGAGGAGACC.......................................................................................	21	1	1.00	1	0	0	1	0
.................................................ATGTGGACTCTGCTCTGGCGGAGCT..........................................................................................................................................................................	25	1	1.00	1	0	0	1	0
...............................................................................................CCACGGACTGAAGTGCCATGTCAGCG...........................................................................................................................	26	1	1.00	1	0	0	1	0
..............................AGCAGTCGCAAGCAAAAGAATGTG..............................................................................................................................................................................................	24	1	1.00	1	0	0	1	0
...........................................................................................................................................................................................................CACCAATCCTGCGGTCGGCGGT...................	22	1	1.00	1	0	0	1	0
...........................................AAAAGAATGTGGACTCTG.......................................................................................................................................................................................	18	1	1.00	1	1	0	0	0
...................................................................................................................................................................................................................CTGCGGTCGGCGGTGTCCTCGAGTGC.......	26	1	1.00	1	0	0	1	0
................................................AATGTGGACTCTGCTCTGGCGGA.............................................................................................................................................................................	23	1	1.00	1	0	0	1	0
...................................................................................................................................................................................................................CTGCGGTCGGCGGTGTCCTCGAGTG........	25	1	1.00	1	0	0	1	0
..................................................TGTGGACTCTGCTCTGGCG...............................................................................................................................................................................	19	1	1.00	1	0	0	1	0
...............................................................CTGGCGGAGCTGCGCAAACAG................................................................................................................................................................	21	1	1.00	1	0	0	1	0
.................................................ATGTGGACTCTGCTCTGGCGGAGCTG.........................................................................................................................................................................	26	1	1.00	1	0	0	1	0
......................................................................................................................................................................................AT-TCTGGTCAGCAATGCCGC.........................................	20	1	1.00	1	0	0	1	0
...............................................................CTGGCGGAGCTGCGCAAACAGAAC.............................................................................................................................................................	24	1	1.00	1	0	0	1	0
..............................................................................................TCCACGGACTGAAGTGCCATGTCAGC............................................................................................................................	26	1	1.00	1	0	0	1	0
.........................................................................................GAATGTCCACGGACTGAAGTGCCAT..................................................................................................................................	25	1	1.00	1	0	0	1	0

droYak3

CTGGCCGAAGATGGTGCCGCAGTGGTCATCAGCAGTCGCAAGCAAAAGAATGTGGACTCTGCTCTGGCGGAGCTGCGAAAACTAAACTTGAATGTCCACGGCTTGAAGTGCCATGTCAGCGAGCCCGAG-GATCGCAAACAGCTCTTCGCGGAGACAATCAGCAAGTTTGGCA-AGCTGAACAT-TCTGGTCAGCAATGCCGCCACCAATCCTGCGGTGGGCGGCGTTCTCGAGTGCGACGAAA	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
...........................................................................................................GTGCCATGTCAGCGAGCCCGAG-GAT...............................................................................................................	25	1	14.00	14	0	0	0	0	0	0	0	0	0	0	14
...........................................................................................................................................................................................................CACCAATCCTGCGGTGGGCGGC...................	22	1	6.00	6	0	1	2	1	0	0	2	0	0	0	0
...................................................GTGGACTCTGCTCTGGCGGA.............................................................................................................................................................................	20	1	3.00	3	1	0	0	0	0	1	1	0	0	0	0
.............................................AAGAATGTGGACTCTGCTCTGGCGGA.............................................................................................................................................................................	26	1	3.00	3	3	0	0	0	0	0	0	0	0	0	0
.................................................ATGTGGACTCTGCTCTGGCGGA.............................................................................................................................................................................	22	1	2.00	2	0	0	1	0	0	0	1	0	0	0	0
.....................................................................................................................................CGCAAACAGCTCTTCGCGGAGA.........................................................................................	22	1	2.00	2	0	0	1	1	0	0	0	0	0	0	0
................................................AATGTGGACTCTGCTCTGGC................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................CGCAAACAGCTCTTCGCGGAGACA.......................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................CCAATCCTGCGGTGGGCGGC...................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..................................................................................................................................GATCGCAAACAGCTCTTCGCGGAGACAAT.....................................................................................	29	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.......................................................................................................TGAAGTGCCATGTCAGCGAGCCCGA....................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................CGCCACCAATCCTGCGGTGGGCGGC...................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................GTTTGGCA-AGCTGAACAT-TCTGGTC....................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................GCCACCAATCCTGCGGTGGGCGGC...................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
................................................AATGTGGACTCTGCTCTGGCGGA.............................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
............................................AAAGAATGTGGACTCTGCTCTGGCGGA.............................................................................................................................................................................	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
........................................................................................TGAATGTCCACGGCTTGAAGT.......................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................ACCAATCCTGCGGTGGGCGGC...................	21	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
.........................................GCAAAAGAATGTGGACTCTGCTCTGGC................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
...................................................................................................GGCTTGAAGTGCCATGTCAGC............................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.............................................................CTCTGGCGGAGCTGCGAAAAC..................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................GTTCTCGAGTGCGACGAAA	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...................................................GTGGACTCTGCTCTGGCGGAGCT..........................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
.......................GGTCATCAGCAGTCGCAAGCAAAAGAAT.................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.................CGCAGTGGTCATCAGCAGTCGCAA...........................................................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
..GGCCGAAGATGGTGCCGCAGTGGTC.........................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
......................................................................................CTTGAATGTCCACGGCTTGAAGTGCC....................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.................CGCAGTGGTCATCAGCAGTC...............................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..............................................AGAATGTGGACTCTGCTC....................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................ATCGCAAACAGCTCTTCGCGGAGAC........................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0

droEre2

CTGGCCGAAGATGGCGCCGCAGTGGTAATCAGCAGTCGCAAGCAAAAAAATGTGGACTCTGCTCTGGCGGAGCTGCGAAAACTGAACTTGAATGTCCATGGATTGAAGTGTCATGTCAGCGAACCCGAG-GATCGCAAACAGCTCTTCGCGGAGACGATCAGCAAGTTTGGCA-AGCTGAACAT-TCTGATCAGCAATGCCGCCACCAATCCAGCGGTGGGCGGAGTCCTCGAGTGCGACGAAA	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.............................................................................................GTCCATGGATTGAAGTGTCATGTCAGC............................................................................................................................	27	1	4.00	4	1	2	0	1	0	0	0
.........................................GCAAAAAAATGTGGACTCTG.......................................................................................................................................................................................	20	1	2.00	2	0	0	0	2	0	0	0
................................................AATGTGGACTCTGCTCTGGCGGAGC...........................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
.............................................................................................................................CGAG-GATCGCAAACAGCTCTTCGCGGA...........................................................................................	27	1	1.00	1	1	0	0	0	0	0	0
.....................................................................................................................................CGCAAACAGCTCTTCGCGGA...........................................................................................	20	1	1.00	1	1	0	0	0	0	0	0
.............................................................................................................GTCATGTCAGCGAACCCGA....................................................................................................................	19	1	1.00	1	0	0	0	1	0	0	0
......................................................................................CTTGAATGTCCATGGATTG...........................................................................................................................................	19	1	1.00	1	0	0	0	1	0	0	0
........................................................................................................................................AAACAGCTCTTCGCGGAGACGAT.....................................................................................	23	1	1.00	1	1	0	0	0	0	0	0
..................................................................................................................................................................................................CAATGCCGCCACCAATCCAGC.............................	21	1	1.00	1	0	1	0	0	0	0	0
.................................................................................................ATGGATTGAAGTGTCATGTCAGC............................................................................................................................	23	1	1.00	1	0	0	0	1	0	0	0
.....................................................................................................................................................................................CAT-TCTGATCAGCAATGCCGC.........................................	21	1	1.00	1	0	0	0	0	1	0	0
...........................................................................................................................CCCGAG-GATCGCAAACAGCTCT..................................................................................................	22	1	1.00	1	0	0	0	0	0	1	0
......................................................................................CTTGAATGTCCATGGATTGAAGTGTCAT..................................................................................................................................	28	1	1.00	1	0	0	0	0	1	0	0
...................................................GTGGACTCTGCTCTGGCGG..............................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0	0	0
.........................................................................................................................................................GACGATCAGCAAGTTTGGC........................................................................	19	1	1.00	1	1	0	0	0	0	0	0
..........................................CAAAAAAATGTGGACTCTGCTCTGG.................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
...................................................................................GAACTTGAATGTCCATGGATT............................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
...................................................GTGGACTCTGCTCTGGCGGA.............................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0	0
.................CGCAGTGGTAATCAGCAGTCGCAAGC.........................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	1	0
...............GCCGCAGTGGTAATCAGCAGT................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	1	0	0	0
...............................................AAATGTGGACTCTGCTCTGGCGGA.............................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0	0	0
............................................................................GAAAACTGAACTTGAATGT.....................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1	0
................................................................................................................................G-GATCGCAAACAGCTCTTCGCGGAGA.........................................................................................	26	1	1.00	1	0	1	0	0	0	0	0
..................................................................................................................................................................................GAACAT-TCTGATCAGCAATGCCGC.........................................	24	1	1.00	1	0	0	0	1	0	0	0
...........................................................................................................GTGTCATGTCAGCGAACCCGA....................................................................................................................	21	1	1.00	1	0	0	0	1	0	0	0
.....................................................GGACTCTGCTCTGGCGGAGCTGCGAAAAC..................................................................................................................................................................	29	1	1.00	1	0	1	0	0	0	0	0
..............................................................................AAACTGAACTTGAATGTCC...................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0
.......................................................................GCTGCGAAAACTGAACTTGA.........................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0
........................................................................................TGAATGTCCATGGATTGAAGTGTC....................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0	0
.............................................................................AAAACTGAACTTGAATGTCCA..................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0
...............................................................................................................................................................CAGCAAGTTTGGCA-AGCTGAACAT-TCC........................................................	27	1	1.00	1	0	1	0	0	0	0	0
.................................................ATGTGGACTCTGCTCTGGCGGA.............................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0	0	0
.................CGCAGTGGTAATCAGCAGTCG..............................................................................................................................................................................................................	21	1	1.00	1	0	0	0	1	0	0	0
.........................................................................................................................................................GACGATCAGCAAGTTTGGCA-AGCT..................................................................	24	1	1.00	1	1	0	0	0	0	0	0
.........................................................................................................................................................................GGCA-AGCTGAACAT-TCTGAC.....................................................	20	1	1.00	1	0	1	0	0	0	0	0
..................GCAGTGGTAATCAGCAGT................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0	0	0
....................................CGCAAGCAAAAAAATGTGGACT..........................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0
.........................................................................................................................................................................................TCTGATCAGCAATGCCGCCACCAATCC................................	27	1	1.00	1	1	0	0	0	0	0	0
...................................................................................................................................................CGCGGAGACGATCAGCAAGTTTGGC........................................................................	25	1	1.00	1	0	1	0	0	0	0	0
.......................................................................................TTGAATGTCCATGGATTGAAGT.......................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0
...........................................AAAAAAATGTGGACTCTGCT.....................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1	0
...........................................................................................................................................................CGATCAGCAAGTTTGGCA-AGCTGAAC..............................................................	26	1	1.00	1	1	0	0	0	0	0	0
..................................................TGTGGACTCTGCTCTGGCGGAGC...........................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0
.......................................................................................................................................................................................................................GGTGGGCGGAGTCCTCGAGTGC.......	22	1	1.00	1	0	0	0	0	0	1	0
................................................AATGTGGACTCTGCTCTGGCGGA.............................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0	0	0
...............................................................CTGGCGGAGCTGCGAAAACTGAACTT...........................................................................................................................................................	26	1	1.00	1	0	0	0	0	1	0	0
............................................................................................................................................................................................GATCAGCAATGCCGCCACC.....................................	19	1	1.00	1	1	0	0	0	0	0	0
.......................................................................GCTGCGAAAACTGAACTTGAATGTCCAT.................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	1	0

dpe_1210

scaffold_23:1271298-1271440 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-16.8	-15.8