dpe_1124

CDS [Dper\GL22744-cds]; exon [dper_GLEANR_4999:1]; exon [dper_GLEANR_4999:2]; CDS [Dper\GL22744-cds]; intron [Dper\GL22744-in]

-#################################################----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## AATGCTGGAGGGTGGCACTATCAACATGATGCGACCTGTCCGGGGAGCAGGTGAGCCAGTGCCTCCGCCGCTTTGACACGGTTCTCAGCGACGGCGACGGGGAGAGTAATTATTCCAGAGACAGAGCGAGAGAGAGAGAGGGAGACAGCACTTGTGCAATATTTATTCATATGACATATGATTTCAATGTCAATGGCTGTTATCGCTATCGATAGCTGGCTCTGTTACCGTTGAAATTTCAAATAGCCGAAGAAATAAAGCGTATTACAATTACAGGCACCATATGGCAGGATGATACGGCTATCGAGGGTGCTGCAGCCGTATTG ***********************************************************************........(((((.((..........((((.........)))).........))..)))))..........************************************************************************************************************************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M042 female body	V111 male body	V042 embryo	M021 embryo	V057 head
.............................................................................................................................................................................................................................................................................................................TATCGAGGGTGCTGCAGCCGT....	21	0	1	2.00	2	2	0	0	0	0
.........................................................................TGACACGGTTCTCAGCGACGGCGACGG..................................................................................................................................................................................................................................	27	0	1	2.00	2	0	2	0	0	0
......................................................................CTTTGACACGGTTCTCAGC.............................................................................................................................................................................................................................................	19	0	1	1.00	1	0	0	0	1	0
........................................................................................................................................................................................................................................................................................CATATGGCAGGATGATACGGC.........................	21	0	1	1.00	1	0	0	1	0	0
...........................................GGAGCAGGTGAGCGAGTGGCT......................................................................................................................................................................................................................................................................	21	2	1	1.00	1	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................GGCAGGATGATACGGCTATCGAGGGT...............	26	0	1	1.00	1	1	0	0	0	0
.......GAGGGTGGCACTATCAACAT...........................................................................................................................................................................................................................................................................................................	20	0	1	1.00	1	0	0	1	0	0
...............................................................................................................................................................................................................................................................................TAAAGGCACTATATGGTAGG...................................	20	3	6	0.17	1	0	0	0	0	1
..........................................................................................................................AGAGCGAGAGAGAGAGAGGGAG......................................................................................................................................................................................	22	0	14	0.07	1	0	1	0	0	0
.....................................................................................................................GAGACAGAGCGAGAGAGAG..............................................................................................................................................................................................	19	0	20	0.05	1	0	1	0	0	0

TTACGACCTCCCACCGTGATAGTTGTACTACGCTGGACAGGCCCCTCGTCCACTCGGTCACGGAGGCGGCGAAACTGTGCCAAGAGTCGCTGCCGCTGCCCCTCTCATTAATAAGGTCTCTGTCTCGCTCTCTCTCTCTCCCTCTGTCGTGAACACGTTATAAATAAGTATACTGTATACTAAAGTTACAGTTACCGACAATAGCGATAGCTATCGACCGAGACAATGGCAACTTTAAAGTTTATCGGCTTCTTTATTTCGCATAATGTTAATGTCCGTGGTATACCGTCCTACTATGCCGATAGCTCCCACGACGTCGGCATAAC ************************************************************************************************************************************************************************************........(((((.((..........((((.........)))).........))..)))))..........***********************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V057 head	V050 head	V111 male body	M042 female body	M021 embryo	V042 embryo
............................................................................................................................................................................................................CGGTAGATATCGACCGACACAAT...................................................................................................	23	3	1	1.00	1	0	1	0	0	0	0
...........................................................................................................................................................................................................GCGATAGATATCGACCGACACAAT...................................................................................................	24	2	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................GATAGATTTCGACCGACACAAT...................................................................................................	22	3	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................GGTAGGTATCGACCGACACAAT...................................................................................................	22	3	1	1.00	1	1	0	0	0	0	0
............................................................................GTGCCATGAGTCGCTGCCA.......................................................................................................................................................................................................................................	19	2	2	0.50	1	0	0	1	0	0	0
.................................................................GCGACGAAATTGTGCCACGAG................................................................................................................................................................................................................................................	21	3	2	0.50	1	1	0	0	0	0	0
......................................................CGGTCACGGAGGTCGCGAA.............................................................................................................................................................................................................................................................	19	2	3	0.33	1	1	0	0	0	0	0
...........................................................................................................................................................................................ATAGTTACGGCCAATAGCGA.......................................................................................................................	20	3	3	0.33	1	0	0	0	1	0	0
.................................................................GCGGCGAAAGTGTGCCAGGAT................................................................................................................................................................................................................................................	21	3	4	0.25	1	1	0	0	0	0	0
..............................CGCTGTACAGGCCCCGCTTC....................................................................................................................................................................................................................................................................................	20	3	9	0.11	1	0	0	0	0	1	0
.................................................................................................................................................GTCGTGGACACGTTAGAAC..................................................................................................................................................................	19	3	20	0.05	1	0	0	0	0	0	1
.........................................................TCAGGGAGGCGGCCATACT..........................................................................................................................................................................................................................................................	19	3	20	0.05	1	0	0	0	1	0	0

Species	Coordinate	ID	Alignment
droPer2	scaffold_20:620355-620680 -	dpe_1124	AATGCTGGAGGGTGGC---ACTATCAACATGATGCGACCTGTCCGGGGAGCAGGTGAGCCAGTGCCTCCGCCGCTTTGACACGGTTCTCAGCGACGGCGACGGGGAGAGTA---------------------ATTATTCC------AGAGACA----GAGCGAGAGAGAGAGAGGGAGACAGCACTT----GT-----------------G-----------CAAT-ATTTATTCATATGACAT------ATGATTTCAATGTCAATGGC------------------------------------------------TGTTATC----------GCTATCGATAGC-----------------TGGCT----CTGTTACCGTTGAAATTTCAAA-----------TAGC----------------CGAAGAAATAAAGCGTATTACAATTACAGGCACCATATGGCAGGATGATACGGCTATCGAGGGTGCTGCAGCCGTATTG
dp5	XR_group6:10707884-10708214 -	dps_3144	AATGCTGGAGGGTGGC---ACTATCAACATGTTG-GACCTGTCCGGGGAGCAGGTGAGCGAGTGGCTACGCAGCTTTGACACGGTTCTCAGCGACGGCGACGGTGAGTGTA---------------------ATTATTCCAG----AGAGAGAGCGAGAGCGAGAGAGAGAGAGGGAGACAGCACTT----GT-----------------G-----------TTAT-ATTTATTCATATGACAT------ATGATTTCAATGTCAATGGC------------------------------------------------TGTTATC----------GCTATCGATAGC-----------------TGGCT----CTGTTACCGTTGAAATTTCAAA-----------TAGC----------------CGAAGAAATAAAGCGTATTACAATTACAGGCACCATATGGCAGGATGATACGGCTATCGAGGGTGCTGCAGCCGTATTG
droWil2	scf2_1100000004762:2784285-2784387 -		AATGCTGAAAGGTAGC---TCCACTCAGTTGTTG-GATCTGACAGCTGAACAGGTGAGCAGTTGGCTCCAAAGCTTCGATACAGTTCTCAGTGATTGTGATGGTGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3	scaffold_13049:22174252-22174633 +	dvi_20930	AATGTTTAAGGCAAGC---GCTATCAATTTGCTG-GATCTCCAGCCCGAGCAGGTGAACAGCTGGTTGCAAAGCTTCGACACAGTTATCAGCGACTGCGACGGTGAGTTTGG------------------CATCTGTGTGCG----AGCGAGAGAAAGAGTGAGGGAAGGAG---AAGAGAGCTCCCACTTGTTGCAGAGCTGCCACCAGGCTTTAATATACTT-TCTTTAATCGATATCATGTCGTTTAATGATATCGACTTTAAAG----------------------------------------------TTTCTTTTATC----------GATATCAATTGGGTTAATTGTGATGAGGCGCG---------------------------CTGGTTTAAAAATTGCTTGAA---ATAATTAT-----TATTAATGTGAATTACCA--ACAGCGACATTGTGGCACGATGACACGGCTATTGAAGGTGCCGCTGATGTGCTG
droMoj3	scaffold_6680:16772879-16773217 +		-----------------------------------------------GAGCAAGTGAACAGCTGGTTGCAAGGCTTTGATACAATTATCAGTGATTGCGACGGTAAGTCTT-------------------CAAGTATGTGCG----TGTGTGAGTGAGAGTGAGAGAGCGAAAAGCAGAGAGATCTTAGAC-TTACAGCGCTGCCACCTAACTTTTGAGAAGTT--G-------------------TATATCGATATATGT----ATCGATGATGTTAAGGGCATATGAGGGAGAGTGAGAGAGAACTTTAAAGAT---------GCTCTTTATCGAAATCAAT----------------------------------------------------GATTTGAATA-TGCATACATACATATTTAT-----CA-CATCGTAAATATTGA--TCAGGTACGCTGTGGCATGATGACAAGGCTATTGAAGGTGCCGCCGATGTGTTG
droGri2	scaffold_15110:21372837-21373173 -		TATGCTTAAAGCAAGC---GCCATTAATATACTA-GATCTTCAGGCTGAGCAGGTAAACAGCTGGCTGCAAAGCTTTGACACAATTATCAGCGACTGTGACGGTAAGTGGAAAACATATATCAATATATATATGTGTGTGTGTGTGAAAGGGAACCCAGCTGCGA------------------------------CAGTGCTGACAACAGG-----------TT--G-----------------CGTTTATCGATATCAATATTAATCGC------------------------------------------------TG--ATTGCTACCTATCGAGATAAAA------------------GTGCGATCTATTTGC----------------AATTGCTTAAAAATTAATTGTA---C-----------------TTATAAATTACGACCACAGCTACGCTGTGGCACGATGACACGGCCATTGAGGGCGCCGCTGATGTGCTG
droAna3	scaffold_13337:5344362-5344464 +		AATGTCCAGAGGCGGC---GCTATCACCTTGTCG-GATTTGTCCAGGGAGCAGGTGAGCGAGTGGCTCCAAAGCTTCGACACTGTTCTCTGCGACGGCGACGGTGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1	scf7180000396371:670729-670831 +		AATGTCCAGAGGCGGC---GTTATCACCTTGTCG-GATTTGTCCAGGGAGCAGGTGAGCGAGTGGCTCCAAAGCTTCGACACTGTTCTCTGCGACGGCGACGGTGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1	scf7180000302626:257751-257856 -		AATGTCCAGAGGCGGAGAAGCAATCAACTTGTCC-GATTTGTCCGGGGAGCAGGTGAGCGAGTGGCTCCAAAGCTTTGACACGGTTCTCTGCGACGGCGACGGTAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1	scf7180000454107:1433212-1433314 -		CATGTCCAGAGGCGGG---GCTATCAACTTGACG-GACTGGACTAAGGAGCAGGTTGCCGAATGGCTCCAAAGTTTCGACACTGTTCTCTGCGATGGTGACGGTGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1	scf7180000490993:757513-757615 -		CATGTCCAGAGGCGGT---GCTATCAACTTGGCG-GACCTATCCGGGGGGCAGGTGGGCGAGTGGCTCCAAAGTTTCGACACGATTCTCTGCGACGGCGACGGTGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1	scf7180000779490:156263-156365 -		AATGTCCAGAGGCGGT---GCTATCAACTTGACG-GACTTATCCGGGGGGCAGGTGGGCGAGTGGCTCCAAAGTTTCGACACGATTCTCTGCGATGGCGACGGTGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1	scf7180000302193:1157986-1158093 -		AATGTCCAGAGGCGGT---GCTATCAACTTGACG-GACCTGTCCGCGGGGCAGGTGGGCCAGTGGCTCCAAAGTTTCGACGCGGTTCTCTGCGACGGCGACGGTGAGTGTG-----------------------------------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1	scf7180000415794:83690-83792 -		AATGTCCAGAGGCGGT---GCTATCAACTTGACG-GACCTAACCGAGGGGCAGGTGAGCGAGTGGCTCCAAAGTTTCGACACGGTTCTCTGCGACGGCGACGGTGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1	scf7180000409471:1713965-1714107 +		AATGTCCAGAGGCAGT---GCTATCAACTTGACG-GACTTATCCGGGGAGCAGGTGAGCGAGTGGCTCCAAAGTTTCGACACGATTCTCTGCGATGGCGACGGTGAGTTTG-----------------------------------AAGGGCGGCAAAGGTGCCACAGAGAGCGGTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAG
dm3	chr3L:17834348-17834484 -		AATGTCCAGAGGCGGT---GCTATCGACTTGACC-GGCCTATCCGAGGAGCAGGTGAGCGAGTGGCTCCAAAGTTTCGACACGGTTCTCTGCGACGGCGACGGTGAGTCTC-----------------------------------AAGGGCGGCTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTGCCACAGAGAGAGGG
droSim2	3l:17413675-17413825 -		AATGTCCAGAGGCGGT---GCTATCGACTTGACC-GGCCTATCCGGGGAGCAGGTGAGCGAGTGGCTCCAAAGTTTCGACACGGTTCTCTGCGACGGCGACGGTGAGTTTC-----------------------------------AAGGGCGGCTAAGGTGCCACAGAGAGCGGTACGTTGGGCTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTG
droSec2	scaffold_0:9880219-9880321 -		AATGTCCAGAGGCGGT---GCTATCGACTTGACC-GGCCTATCCGGGGAGCAGGTGAGCGAGTGGCTCCAAAGTTTCGACACGGTTCTCTGCGACGGCGACGGTGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3	3L:16219145-16219263 +		AATGTCCAGAGGCGGT---GCTGTGGACTTGACC-GGCCTATCCGGGGAGCAGGTGAGCGAGTGGCTCCAAAGTTTCGACACGGTTCTCTGCGACGGCGACGGTGAGTCTC-----------------------------------AAGGGCGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTG
droEre2	scaffold_4784:16029717-16029819 +		AATGTCCAGAGGCAGT---GCTATCGACTTGACC-GGCCTATCCGCGGTGCAGGTGAGCGAGTGGCTCCAAAGTTTCGACACGGTTCTCTGCGATGGCGACGGTGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droPer2

AATGCTGGAGGGTGGC---ACTATCAACATGATGCGACCTGTCCGGGGAGCAGGTGAGCCAGTGCCTCCGCCGCTTTGACACGGTTCTCAGCGACGGCGACGGGGAGAGTA---------------------ATTATTCC------AGAGACA----GAGCGAGAGAGAGAGAGGGAGACAGCACTT----GT-----------------G-----------CAAT-ATTTATTCATATGACAT------ATGATTTCAATGTCAATGGC------------------------------------------------TGTTATC----------GCTATCGATAGC-----------------TGGCT----CTGTTACCGTTGAAATTTCAAA-----------TAGC----------------CGAAGAAATAAAGCGTATTACAATTACAGGCACCATATGGCAGGATGATACGGCTATCGAGGGTGCTGCAGCCGTATTG	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCGAGGGTGCTGCAGCCGT....	21	1	2.00	2	0	2	0	0	0	0
............................................................................TGACACGGTTCTCAGCGACGGCGACGG..................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	2.00	2	0	0	0	0	0	2
.........................................................................CTTTGACACGGTTCTCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATATGGCAGGATGATACGGC.........................	21	1	1.00	1	0	0	1	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGGATGATACGGCTATCGAGGGT...............	26	1	1.00	1	0	1	0	0	0	0
.......GAGGGTGGC---ACTATCAACAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0
........................................................................................................................................................A----GAGCGAGAGAGAGAGAGGGAG.......................................................................................................................................................................................................................................................................................................................................	22	14	0.07	1	0	0	0	0	0	1
...................................................................................................................................................GAGACA----GAGCGAGAGAGAG...............................................................................................................................................................................................................................................................................................................................................	19	20	0.05	1	0	0	0	0	0	1

dp5

AATGCTGGAGGGTGGC---ACTATCAACATGTTG-GACCTGTCCGGGGAGCAGGTGAGCGAGTGGCTACGCAGCTTTGACACGGTTCTCAGCGACGGCGACGGTGAGTGTA---------------------ATTATTCCAG----AGAGAGAGCGAGAGCGAGAGAGAGAGAGGGAGACAGCACTT----GT-----------------G-----------TTAT-ATTTATTCATATGACAT------ATGATTTCAATGTCAATGGC------------------------------------------------TGTTATC----------GCTATCGATAGC-----------------TGGCT----CTGTTACCGTTGAAATTTCAAA-----------TAGC----------------CGAAGAAATAAAGCGTATTACAATTACAGGCACCATATGGCAGGATGATACGGCTATCGAGGGTGCTGCAGCCGTATTG	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
......................ATCAACATGTTG-GACCTGTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.........................AACATGTTG-GACCTGTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTATCGAGGGTGCTGCAGC.......	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................GGGGAGCAGGTGAGCGAGTGGCTAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	1	0	0	0	0	0	0
...GCTGGAGGGTGGC---ACTAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................................................................TTTGACACGGTTCTCAGCGACGGCGACG...................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	1
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTATCGAGGGTGCTGCAGC.......	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0
....CTGGAGGGTGGC---ACTATCAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................TGGCTACGCAGCTTTGACACGGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	1	0
...............................................GAGCAGGTGAGCGAGTGGCTAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................AGCAGGTGAGCGAGTGGCTACG...................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................ACATGTTG-GACCTGTCCGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................ACTATCAACATGTTG-GACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................AACATGTTG-GACCTGTCCGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................................GAGCGAGTGGCTACGCAGCTTTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................CGGCGACGGTGAGTGTA---------------------ATT..................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....TGGAGGGTGGC---ACTATCAACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................TG-GACCTGTCCGGGGAGCAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0
.............................................................................................................................................G----AGAGAGAGCGAGAGCGAGAGAGA................................................................................................................................................................................................................................................................................................................................................	24	14	0.07	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................GAGAGCGAGAGCGAGAGAGA................................................................................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	1	0	0	0	0	0	0	0	0

droWil2

AATGCTGAAAGGTAGC---TCCACTCAGTTGTTG-GATCTGACAGCTGAACAGGTGAGCAGTTGGCTCCAAAGCTTCGATACAGTTCTCAGTGATTGTGATGGTGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
.....................................................................AAAGCTTCGATACAGTTCTCAGTG............................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0
.ATGCTGAAAGGTAGC---TCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
..............................GTTG-GATCTGACAGCTGAACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0
.....................................TCTGACAGCTGAACAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0
.........................CAGTTGTTG-GATCTGACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
......................................................................................CTCAGTGATTGTGATGGCAC...............................................................................................................................................................................................................................................................................................................................................................................................................	20	9	0.11	1	0	0	0	1	0

droVir3

AATGTTTAAGGCAAGC---GCTATCAATTTGCTG-GATCTCCAGCCCGAGCAGGTGAACAGCTGGTTGCAAAGCTTCGACACAGTTATCAGCGACTGCGACGGTGAGTTTGG------------------CATCTGTGTGCG----AGCGAGAGAAAGAGTGAGGGAAGGAG---AAGAGAGCTCCCACTTGTTGCAGAGCTGCCACCAGGCTTTAATATACTT-TCTTTAATCGATATCATGTCGTTTAATGATATCGACTTTAAAG----------------------------------------------TTTCTTTTATC----------GATATCAATTGGGTTAATTGTGATGAGGCGCG---------------------------CTGGTTTAAAAATTGCTTGAA---ATAATTAT-----TATTAATGTGAATTACCA--ACAGCGACATTGTGGCACGATGACACGGCTATTGAAGGTGCCGCTGATGTGCTG	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
............................TTGCTG-GATCTCCAGCCCGAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3
.ATGTTTAAGGCAAGC---GCTAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................TTGCTG-GATCTCCAGCCCGAGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
......TAAGGCAAGC---GCTATCAATTTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0

droMoj3

-----------------------------------------------GAGCAAGTGAACAGCTGGTTGCAAGGCTTTGATACAATTATCAGTGATTGCGACGGTAAGTCTT-------------------CAAGTATGTGCG----TGTGTGAGTGAGAGTGAGAGAGCGAAAAGCAGAGAGATCTTAGAC-TTACAGCGCTGCCACCTAACTTTTGAGAAGTT--G-------------------TATATCGATATATGT----ATCGATGATGTTAAGGGCATATGAGGGAGAGTGAGAGAGAACTTTAAAGAT---------GCTCTTTATCGAAATCAAT----------------------------------------------------GATTTGAATA-TGCATACATACATATTTAT-----CA-CATCGTAAATATTGA--TCAGGTACGCTGTGGCATGATGACAAGGCTATTGAAGGTGCCGCCGATGTGTTG	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCATGATGACAAGGCT........................	18	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATGATGACAAGGCTATT.....................	20	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACAAGGCTATTGAAGG................	20	1	1.00	1	1	0	0	0	0	0

droGri2

TATGCTTAAAGCAAGC---GCCATTAATATACTA-GATCTTCAGGCTGAGCAGGTAAACAGCTGGCTGCAAAGCTTTGACACAATTATCAGCGACTGTGACGGTAAGTGGAAAACATATATCAATATATATATGTGTGTGTGTGTGAAAGGGAACCCAGCTGCGA------------------------------CAGTGCTGACAACAGG-----------TT--G-----------------CGTTTATCGATATCAATATTAATCGC------------------------------------------------TG--ATTGCTACCTATCGAGATAAAA------------------GTGCGATCTATTTGC----------------AATTGCTTAAAAATTAATTGTA---C-----------------TTATAAATTACGACCACAGCTACGCTGTGGCACGATGACACGGCCATTGAGGGCGCCGCTGATGTGCTG	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
.................................................................................CAATTATCAGCGACTGTGA.....................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1

droAna3

AATGTCCAGAGGCGGC---GCTATCACCTTGTCG-GATTTGTCCAGGGAGCAGGTGAGCGAGTGGCTCCAAAGCTTCGACACTGTTCTCTGCGACGGCGACGGTGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
...................................GATTTGTCCAGGGAGCAGGTGAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	2	0
................................................................GCTCCAAAGCTTCGACACTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	2.00	2	2	0	0	0	0	0
.....CCAGAGGCGGC---GCTATCACCTTGTCG-G.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
....................................................................................TTCTCTGCGACGGCGACG...................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
.............................TGTCG-GATTTGTCCAGGGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
...............C---GCTATCACCTTGTCG-GATTTGTCCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	1	0

droBip1

AATGTCCAGAGGCGGC---GTTATCACCTTGTCG-GATTTGTCCAGGGAGCAGGTGAGCGAGTGGCTCCAAAGCTTCGACACTGTTCTCTGCGACGGCGACGGTGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droKik1

AATGTCCAGAGGCGGAGAAGCAATCAACTTGTCC-GATTTGTCCGGGGAGCAGGTGAGCGAGTGGCTCCAAAGCTTTGACACGGTTCTCTGCGACGGCGACGGTAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droFic1

CATGTCCAGAGGCGGG---GCTATCAACTTGACG-GACTGGACTAAGGAGCAGGTTGCCGAATGGCTCCAAAGTTTCGACACTGTTCTCTGCGATGGTGACGGTGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droEle1

CATGTCCAGAGGCGGT---GCTATCAACTTGGCG-GACCTATCCGGGGGGCAGGTGGGCGAGTGGCTCCAAAGTTTCGACACGATTCTCTGCGACGGCGACGGTGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droRho1

AATGTCCAGAGGCGGT---GCTATCAACTTGACG-GACTTATCCGGGGGGCAGGTGGGCGAGTGGCTCCAAAGTTTCGACACGATTCTCTGCGATGGCGACGGTGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droBia1

AATGTCCAGAGGCGGT---GCTATCAACTTGACG-GACCTGTCCGCGGGGCAGGTGGGCCAGTGGCTCCAAAGTTTCGACGCGGTTCTCTGCGACGGCGACGGTGAGTGTG-----------------------------------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droTak1

AATGTCCAGAGGCGGT---GCTATCAACTTGACG-GACCTAACCGAGGGGCAGGTGAGCGAGTGGCTCCAAAGTTTCGACACGGTTCTCTGCGACGGCGACGGTGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droEug1

AATGTCCAGAGGCAGT---GCTATCAACTTGACG-GACTTATCCGGGGAGCAGGTGAGCGAGTGGCTCCAAAGTTTCGACACGATTCTCTGCGATGGCGACGGTGAGTTTG-----------------------------------AAGGGCGGCAAAGGTGCCACAGAGAGCGGTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAG	Size	Hit Count	Total Norm	Total
No Reads

dm3

AATGTCCAGAGGCGGT---GCTATCGACTTGACC-GGCCTATCCGAGGAGCAGGTGAGCGAGTGGCTCCAAAGTTTCGACACGGTTCTCTGCGACGGCGACGGTGAGTCTC-----------------------------------AAGGGCGGCTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTGCCACAGAGAGAGGG	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.............................................AGGAGCAGGTGAGCGAGTGGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....TCCAGAGGCGGT---GCTATCGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..TGTCCAGAGGCGGT---GCTATCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..TGTCCAGAGGCGGT---GCTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................GTCTC-----------------------------------AAGGGCGGCTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTGC.............	22	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................AGCAGGTGAGCGAGTGGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
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.................................................................................................CGACGGTGAGTCTC-----------------------------------AAGGGCGG...............................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................GGCGACGGTGAGTCTC-----------------------------------AAGGGCGGCT.............................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................CGGTGAGTCTC-----------------------------------AAGGGCGGC..............................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................TATCCGAGGAGCAGGTGAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
........................................ATCCGAGGAGCAGGTGAGCGAGTGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
...............................ACC-GGCCTATCCGAGGAGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................CGAGGAGCAGGTGAGCGAGTGGCTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
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...GTCCAGAGGCGGT---GCTATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................TCTCTGCGACGGCGACGGTGA...............................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
....................................................................CAAAGTTTCGACACGGTTCTC................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................TTGACC-GGCCTATCCGAGGAGCAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
......................................................................................CTCTGCGACGGCGACGGCA................................................................................................................................................................................................................................................................................................................................................................................................................	19	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
..................................................CAGGTGAGCGAGTGGACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

AATGTCCAGAGGCGGT---GCTATCGACTTGACC-GGCCTATCCGGGGAGCAGGTGAGCGAGTGGCTCCAAAGTTTCGACACGGTTCTCTGCGACGGCGACGGTGAGTTTC-----------------------------------AAGGGCGGCTAAGGTGCCACAGAGAGCGGTACGTTGGGCTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTG	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
...............................................................................CACGGTTCTCTGCGACGGCGACG...................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................ACGGTTCTCTGCGACGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................TTCGACACGGTTCTCTGCGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AATGTCCAGAGGCGGT---GCTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................GTTTCGACACGGTTCTCTGCGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................TCGACACGGTTCTCTGCGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................TCCAAAGTTTCGACACGGTTCTC................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................ACTTGACC-GGCCTATCCGGGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................CTCCAAAGTTTCGACACGGTTCTC................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................GCCACAGAGAGCGGTACGTTGGG.................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...........GCGGT---GCTATCGACTTGACC-G.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................GACACGGTTCTCTGCGACG.........................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................TCGACACGGTTCTCTGCGACG.........................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................TTCGACACGGTTCTCTGCGACGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................GGTACGTTGGGCTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T..	15	6	0.17	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0

droSec2

AATGTCCAGAGGCGGT---GCTATCGACTTGACC-GGCCTATCCGGGGAGCAGGTGAGCGAGTGGCTCCAAAGTTTCGACACGGTTCTCTGCGACGGCGACGGTGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
..TGTCCAGAGGCGGT---GCTATCGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0
...............................................GAGCAGGTGAGCGAGTGGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1
.................................................GCAGGTGAGCGAGTGGCTCCAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0
..............GT---GCTATCGACTTGACC-GGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	1
..........................................................CGAGTGGCTCCAAAGTTTCGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0
...............................ACC-GGCCTATCCGGGGAGCAGGTGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0
..................................................................................GGTTCTCTGCGACGGCGACGG..................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	1
........................CGACTTGACC-GGCCTATCCGGGGAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	1	0
..........................................................................TTCGACACGGTTCTCTGCGACGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0
..TGTCCAGAGGCGGT---GCTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0

droYak3

AATGTCCAGAGGCGGT---GCTGTGGACTTGACC-GGCCTATCCGGGGAGCAGGTGAGCGAGTGGCTCCAAAGTTTCGACACGGTTCTCTGCGACGGCGACGGTGAGTCTC-----------------------------------AAGGGCGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTG	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
...............................................................................CACGGTTCTCTGCGACGGCGACGGTGA...............................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.................................................GCAGGTGAGCGAGTGGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..........................................................................TTCGACACGGTTCTCTGCGACGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...................................................................CCAAAGTTTCGACACGGTTCTCTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
........................................................................GTTTCGACACGGTTCTCTGCGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...........................................................GAGTGGCTCCAAAGTTTCGACACGGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.....................................................................................................GGTGAGTCTC-----------------------------------AAGGGCGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------....	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0

droEre2

AATGTCCAGAGGCAGT---GCTATCGACTTGACC-GGCCTATCCGCGGTGCAGGTGAGCGAGTGGCTCCAAAGTTTCGACACGGTTCTCTGCGATGGCGACGGTGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
..............GT---GCTATCGACTTGACC-GGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	2	0	0
...............................................................................CACGGTTCTCTGCGATGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1	0
.................................................................................CGGTTCTCTGCGATGGCGACGGCA................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0	0
...GTCCAGAGGCAGT---GCTATCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0	0
.................................................................CTCCAAAGTTTCGACACGGTTCTCTGCG............................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0	0
.......................................................................AGTTTCGACACGGTTCTCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0
...................................................................................GTTCTCTGCGATGGCGACG...................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0
...........................................CGCGGTGCAGGTGAGCGAGTGGCTCCAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	0	0	0	0	1	0	0
..............................................GGTGCAGGTGAGCGAGTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0
.........................GACTTGACC-GGCCTATCCGCGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0	0
.............................................................................GACACGGTTCTCTGCGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0	0
........................................................................GTTTCGACACGGTTCTCTGCGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0	0
........................................ATCCGCGGTGCAGGTGAGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1	0
........................................ATCCGCGGTGCAGGTGAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0
...................................GGCCTATCCGCGGTGCAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0
...................GCTATCGACTTGACC-GGCCTATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0	0
........................................ATCCGCGGTGCAGGTGAGCGAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	1	0
............................................................................CGACACGGTTCTCTGCGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0

dpe_1124

scaffold_20:620405-620630 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-8.4	-8.3	-8.0