dpe_1120

CDS [Dper\GL22808-cds]; exon [dper_GLEANR_5057:3]; CDS [Dper\GL22808-cds]; exon [dper_GLEANR_5057:4]; intron [Dper\GL22808-in]

##################################################--------------------------------------------------------------------################################################## ACCGTCCCTGGGCCAAGTCTGGCGATCCAGTGATTCTAGAGGAGCCTAAGGTACTTGCGAGTGCATTTGATTTGTTCTCAATATACCGTCAATTTCATATTTTTCATTTATTTTATAGATTAAGGAGATTGCTGAAAAGAAGAAGAAGACACCTGGACAGATTCTCAT ************************************************........(((.(((.......))).))).......................................************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M021 embryo	V042 embryo	V111 male body	M042 female body	V057 head
............................................................................................................................................AGAAGAAGACACCTGGAC..........	18	0	1	19.00	19	19	0	0	0	0
.....................................................................................................................................GAAAAGAAGAAGAAGACACCTGGAC..........	25	0	1	12.00	12	12	0	0	0	0
..........................................................................................................................................GAAGAAGAAGACACCTGGAC..........	20	0	1	7.00	7	6	1	0	0	0
.....................................................................................................................................GAAAAGAAGAAGAAGACACCTGGACAG........	27	0	1	6.00	6	6	0	0	0	0
........................................................................................................................................AAGAAGAAGAAGACACCTGGAC..........	22	0	1	5.00	5	5	0	0	0	0
..............................................................................................................................................AAGAAGACACCTGGACAG........	18	0	1	5.00	5	5	0	0	0	0
.......................................................................................................................................AAAGAAGAAGAAGACACCTGGACAG........	25	0	1	5.00	5	5	0	0	0	0
.....................................................................................................................GATTAAGGAGATTGCTGAAA...............................	20	0	1	4.00	4	4	0	0	0	0
............................................................................................................................GAGATTGCTGAAAAGAAGAAGA......................	22	0	1	4.00	4	3	0	1	0	0
...........................................................................................................................................AAGAAGAAGACACCTGGAC..........	19	0	1	3.00	3	3	0	0	0	0
.........................................................................................................................................AGAAGAAGAAGACACCTGGACAGA.......	24	0	1	3.00	3	3	0	0	0	0
.........................................................................................................................................AGAAGAAGAAGACACCTGGAC..........	21	0	1	3.00	3	3	0	0	0	0
.................................................................................................................................TGCTGAAAAGAAGAAGAAGACACCTGGAC..........	29	0	1	2.00	2	2	0	0	0	0
..................CTGGCGATCCAGTGATTCTAGAGGAGCCT.........................................................................................................................	29	0	1	2.00	2	2	0	0	0	0
...............................................................................................................................................AGAAGACACCTGGACAGA.......	18	0	1	2.00	2	2	0	0	0	0
...............................................................................................................................................AGAAGACACCTGGACAGAT......	19	0	1	2.00	2	2	0	0	0	0
.........................................................................................................................AAGGAGATTGCTGAAAAGAAG..........................	21	0	1	2.00	2	2	0	0	0	0
..........................................................................................................................................GAAGAAGAAGACACCTGGACAGATT.....	25	0	1	2.00	2	2	0	0	0	0
.................................................................................................................................................AAGACACCTGGACAGATTCTCAT	23	0	1	2.00	2	2	0	0	0	0
............................................................................................................................................AGAAGAAGACACCTGGACAGA.......	21	0	1	2.00	2	2	0	0	0	0
.........................................................................................................................................AGAAGAAGAAGACACCTGGACAGATTCTC..	29	0	1	2.00	2	1	0	1	0	0
.................................................................................................................CTAAGATTAAGGAGATTGCTGAAA...............................	24	3	1	2.00	2	2	0	0	0	0
.............................................................................................................................................GAAGAAGACACCTGGACAG........	19	0	1	2.00	2	2	0	0	0	0
............................................................................................................................................AGAAGAAGACACCTGGACAG........	20	0	1	2.00	2	2	0	0	0	0
....................GGCGATCCAGTGATTCTAGA................................................................................................................................	20	0	1	1.00	1	0	1	0	0	0
...........................................................................................................................GGAGATTGCTGAAAAGAAGAAGAA.....................	24	0	1	1.00	1	0	0	1	0	0
..........................................................................................................................................GAAGAAGAAGACACCTGGACAGG.......	23	1	1	1.00	1	1	0	0	0	0
............................................................................................................................................AGAAGAAGACACCTGGACAGAT......	22	0	1	1.00	1	1	0	0	0	0
.....................................................................................................................GATTAAGGAGATTGCTGAA................................	19	0	1	1.00	1	1	0	0	0	0
.........................................................................................................................................AGAAGAAGAAGACACCTGGACAGATT.....	26	0	1	1.00	1	1	0	0	0	0
.............................GTGATTCTAGAGGAGCCTAAGATTA..................................................................................................................	25	3	1	1.00	1	0	0	1	0	0
.............................GTGATTCTAGAGGAGCCTAAGA.....................................................................................................................	22	1	1	1.00	1	0	0	1	0	0
............................................................................................................................................AGAAGAAGACACCTGGACA.........	19	0	1	1.00	1	0	1	0	0	0
.................................................................................................................................TGCTGAAAAGAAGAAGAAGACACCT..............	25	0	1	1.00	1	1	0	0	0	0
.......................................................................................................................TTAAGGAGATTGCTGAAAAG.............................	20	0	1	1.00	1	1	0	0	0	0
................................................................................................................................................GAAGACACCTGGACAGATTCTCAT	24	0	1	1.00	1	1	0	0	0	0
.......................GATCCAGTGATTCTAGAGGAGC...........................................................................................................................	22	0	1	1.00	1	0	1	0	0	0
........................ATCCAGTGATTCTAGAGGAGCCTAA.......................................................................................................................	25	0	1	1.00	1	0	1	0	0	0
.....................................................................................................................................GAAAAGAAGAAGAAGACACCTGGACAGA.......	28	0	1	1.00	1	1	0	0	0	0
...............................................................................................................................ATTGCTGAAAAGAAGAAGAAGACACCT..............	27	0	1	1.00	1	1	0	0	0	0
......................CGATCCAGTGATTCTAGAGGAGC...........................................................................................................................	23	0	1	1.00	1	0	1	0	0	0
...........................................................................................................................................AAGAAGAAGACACCTGGACA.........	20	0	1	1.00	1	0	1	0	0	0
.................................................................................................................................................AAGACACCTGGACAGATTCT...	20	0	1	1.00	1	0	0	1	0	0
..................................................................................................................................GCTGAAAAGAAGAAGAAGACACCTG.............	25	0	1	1.00	1	1	0	0	0	0
...............................GATTCTAGAGGAGCCTAAGATT...................................................................................................................	22	2	1	1.00	1	0	0	1	0	0
.......................................................................................................................................AAAGAAGAAGAAGACACCTGGACAGG.......	26	1	1	1.00	1	1	0	0	0	0
.......................................................................................................................................AAAGAAGAAGAAGACACCTGGACA.........	24	0	1	1.00	1	1	0	0	0	0
...GTCCCTGGGCCAAGTCTGGC.................................................................................................................................................	20	0	1	1.00	1	0	1	0	0	0
...GTCCCTGGGCCAAGTCTGGCG................................................................................................................................................	21	0	1	1.00	1	0	0	0	1	0
.....................................................................................................................GATTAAGGAGATTGCTGAAAAGAAGA.........................	26	0	1	1.00	1	1	0	0	0	0
...........................CAGTGATTCTAGAGGAGC...........................................................................................................................	18	0	1	1.00	1	1	0	0	0	0
...........................CAGTGATTCTAGAGGAGCCT.........................................................................................................................	20	0	1	1.00	1	1	0	0	0	0
....................................................................................................................................TGAAAAGAAGAAGAAGACACCTGAACA.........	27	1	1	1.00	1	0	0	0	1	0
.............................................................................................................................................GAAGAAGACACCTGGACA.........	18	0	1	1.00	1	0	1	0	0	0
..................................................................................................................................GCTGAAAAGAAGAGGAAGACACCTG.............	25	1	1	1.00	1	1	0	0	0	0
...............................................................................................................................................AGAAGACACCTGGACAGATT.....	20	0	1	1.00	1	1	0	0	0	0
....................................................................................................................................................ACACCTGGACAGATTCTC..	18	0	1	1.00	1	1	0	0	0	0
.......................................................................................................................................AAAGAAGAAGAAGACACCTGGACAGAT......	27	0	1	1.00	1	1	0	0	0	0
..................................................................................................................................GCTGAAAAGAAGAAGAAGACACCT..............	24	0	1	1.00	1	0	0	0	1	0
........................ATCCAGTGATTCTAGAGGAGCCTAAGATT...................................................................................................................	29	2	1	1.00	1	0	0	1	0	0
..........................................................................................................................................GAAGAAGAGGACACCTGGAC..........	20	1	1	1.00	1	1	0	0	0	0
...........................................................................................................................................AAAAAGAAGACACCTGGA...........	18	1	2	0.50	1	1	0	0	0	0
.....................................................................................................................GATGAAGGAGACTGCTGAGAA..............................	21	3	3	0.33	1	0	0	1	0	0
.............GAAGTATGGCGATCCAGT.........................................................................................................................................	18	2	10	0.10	1	0	0	0	0	1
.............GAAGTCTGGCGCTCCAGTC........................................................................................................................................	19	3	14	0.07	1	0	1	0	0	0
...............................................................................................................................................TGAAAACAGCTGGACAGATT.....	20	3	16	0.06	1	0	0	0	0	1
.............GAAGTCTGTCGATCCAGTC........................................................................................................................................	19	3	18	0.06	1	0	1	0	0	0
............................................................................................................................GAGAATGCAGAAAAGAAGAAT.......................	21	3	20	0.05	1	0	0	1	0	0

TGGCAGGGACCCGGTTCAGACCGCTAGGTCACTAAGATCTCCTCGGATTCCATGAACGCTCACGTAAACTAAACAAGAGTTATATGGCAGTTAAAGTATAAAAAGTAAATAAAATATCTAATTCCTCTAACGACTTTTCTTCTTCTTCTGTGGACCTGTCTAAGAGTA ************************************************........(((.(((.......))).))).......................................************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V057 head
................................................TCCACGATCGATCACGTAAAC...................................................................................................	21	3	2	0.50	1	1
.........................................................................CAAGAGTTATGAGGCAGGT............................................................................	19	3	20	0.05	1	1

Species	Coordinate	ID	Alignment
droPer2	scaffold_20:6463-6630 +	dpe_1120	ACCGTCCCTGGGCCAAGTCTGGCGATCCAGTGATTCTAGAGGAGCCTAAGGTACT--T---------------------------GCGAGTGCATTTGATTTGTTCTCAATATAC-CGTC---------------AATTTCATAT---TTTT-----CATT----TATTTTATAGATTAAGGAGATTGCTGAAAAGAAGAAGAAGACACCTGGACAGATTCTCAT
dp5	XR_group6:10076061-10076228 +		ACCGTCCCTGGGCCAAGTCTGGCGATCCAGTGATTCTAGAGGAGCCTAAGGTACT--T---------------------------GCGAGTGCATTTGATTTGTTCTGAATATAC-CGTC---------------AATTTCATAT---TTTT-----CATT----TATTTTATAGATTAAGGAGATTGCTGAAAAGAAGAAGAAGACACCTGGACAGATTCTCAT
droWil2	scf2_1100000004511:2103918-2104084 -		ATCGTCCATGGGCCAAGAAGGGTGATCCTGTCATCCTAGAGGAGCCTAAGGTTAG--CTCTC----------------------------------------------AATAGCTCTCTCACATTCACAT-TT-GTAATTATTTT---CATG-----TATGGATTTTTTTAATAGATTAAGGAACTTGCTGCGAAAAAGAATAAGACCGCCGGACAGATTCTTAT
droVir3	scaffold_13049:23818513-23818675 -		ACCGTCCTTGGGCCAAGGAGGGTGATCCCGTGATTCTAGAGGAACAAGCCGTAAG--TCAAT------------------TAAGTGAAAATGCA-------------CAACAGAC--------------T-GT------TCAACATTTAAAC--------TGTATCCTCTTTTAGATTAAGGACATTGCTGAATCAAAGAAAAAGACACCTGGACAGATTCTGAT
droMoj3	scaffold_6680:18441545-18441706 -		ATCGCCCATGGGCCAAGGAAGGTGATCCGGTTATTCTAGAAGAGAAAAAGGTAAA--ATAGG-TTTAGATAGCTCAA--CTAAAGG----------------------AACTAAC--------------T-GA------GCAACC---------------TCTAAAATCTTCTAGATCAAGGAAATTGCTGCTGCCAAAAACAAGACACCCGGACAGATTTTGAT
droGri2	scaffold_15110:13853769-13853934 +		ATCGTCCATGGGCCAAACCGGGTGATCCAGTTATCCTGGAGGAAGAAGCTGTAAG--CCGTA---------------ACATAACTAACATAACA-------------TAACGA--------------ATA-GT------TCTTTC---TCTA-----CAGTTTGTCCTCTTATAGATTAAGAAAATCGCTCAGGCCAAGAATAAGACACCTGGCCAAATTCTGAT
droAna3	scaffold_13337:5886397-5886553 -		ACCGTCCCTGGGCCAAGGAAGGTGATCCGGTCATCCTGGAGGAGCCAAAGGTAAA--ACTAATTTTAAATA------------------------------GT----G------------------ATTA-G-----AAAAATCA---TAAT-----TAAAATTTATATCCTCAGATCAAGGAGCTGGCTGCCAAGCTGAAGAAGACTCCTGGACAGGTCCTGAT
droBip1	scf7180000396371:1217678-1217835 -		ACCGCCCCTGGGCCAAGGAAGGCGATCCGGTCATTCTGGAGGAGCCAAAGGTACA--ATGAATT-----------------------------ATTAAATCTGG---------------------------CTTGGATGTACCTT---AATC-----CG-AACTTTAATTCACAGATCAAGGAGCTGGCTGCCAAACTGAAGAAGACCCCTGGACAGGTTCTGAT
droKik1	scf7180000302391:1225129-1225288 +		ACCGCCCCTGGGCCAAGGCTGGTGATCCGGTCATCCTGGAGGAACCTAAGGTGGA--TATTT-----------------------------------------------------TAGTAATATTTA-------AAAATAAACAT---AAATTTACATAACATTTTTAATCATAGATCAAGGAACTGGCAGCCAAGAAGAACAAGACCCCGGGACAGATTCTTAT
droFic1	scf7180000454113:3095267-3095432 +		ATCGCCCATGGGCCAAGGCCGGCGATCCGGTCATCCTCGAGGAGGCTAAGGTATG--TTAAT---------------TCTTAGTAAGGAAATTA-------------TTTTGC---TT------------------ATTTAATTT---CAAT-----TATATAATACTGTTTCAGATCAAGGAGATCGCAGCCGCGAAAAACAAAACTCCTGGACAGATCCTCAT
droEle1	scf7180000490993:2192314-2192472 +		ACCGTCCATGGGCCAAAGCTGGCGACCCAGTCATTCTAGAGGAGGCAAAGGTATG--TTCAT------------------------------------------------------TATTACTTTGGGTA-GTTTAGTATAACTA---A-AA-----TACAACTTACACCTATAGATCAAGGAGATAGCCACCAAGAAAAACAAGACTCCTGGACAGATCCTCAT
droRho1	scf7180000777142:7061-7219 -		ACCATCCATGGTTCAAGGCTGGCGACCCGGTCATCCTAGAAGAGCCTAAGGTATG--TTTAA------------------------------------------------------TATTACATGGACTA-GTTTAATTTGACTA---A-AA-----TATGTCTTCAACTTATAGATCAAGGAGATTGCTACCAAGAAAAACAAGACACCTGGACAGATCCTCAT
droBia1	scf7180000302334:46257-46421 -		ACCGCCCATGGGCCAAGGCTGGTGATCCGGTCATCCTAGAGGAGGCTAAGGTATG--TTTTC------------------------------------------------------TGTCATACAAAGAA-GTTAAATTACACTT---AAATTGTTGTGTGCTTTAAATTTGTAGATCAAGGAGATTGCCGCCAAGAAGAACAAGACTCCTGGACAGATCCTCAT
droTak1	scf7180000414445:596691-596855 +		ACCGCCCATGGGCCAAGGCTGGCGATCCGGTCATCCTAGAGGAGGCAAAGGTATG--ACTCT------------------------------------------------------AACCATATAAACAA-GTGGCATTTAACTT---AAAGCATTACACTTTTTAAACTTGTAGATCAAGGAGATTGCCACCAAGAAGAACAAGACTCCTGGACAGATCCTCAT
droEug1	scf7180000409711:3486251-3486413 -		ACCGCCCATGGGCCAAGCCTGGTGACCCGGTTATCCTGGAGGAGGCTAAGGTAAGTGTTCTC------------------------------------------------------TTTTATGTTTATAAGGTTGTATTTATCTA---AATT-----TTTATTTTACACTTTCAGATCAAGGAGATTGCTGCCAAGAAGAAGAAGACTCCTGGACAGATTCTCAT
dm3	chr3L:11614473-11614632 -		ACCGCCCATGGGCCAAGGCTGGTGATCCGGTCATCCTAGAGGAGGCTAAGGTTGG--TTTGC------------------------------------------------------ATTGATAACAACAT-GTTGAATTTAACTT---TAAG-----CATTTTTAAAACTTTTAGATCAAGGAAATTGCCGCTAAGAAGAAGAAGACCCCTGGACAGATCCTTAT
droSim2	3l:11322654-11322813 -		ACCGCCCATGGGCCAAGGCTGGTGATCCGGTCATCCTAGAGGAGGCGAAGGTTGG--TTTGC------------------------------------------------------TTTTATAACAACAT-GTTGAATTTAACTT---TAAG-----CATTTTTAACACTATTAGATCAAGGAGATTGCCGCTAAGAAAAAGAAGACCCCTGGACAGATCCTCAT
droSec2	scaffold_0:3801582-3801738 -		ACCGCCCATGGGCCAAGGCTGGTGATCCGGTCATCCTAGAGGAGGCTAAGGTTCG--TTTGC------------------------------------------------------TTTTATA---ACAT-GTTGAATTTAACTT---TAAG-----CATTTTTAAAACTTTTAGATCAAGGAGATTGCCGCTAAGAAAAAGAGGACCCCTGGACAGATCCTCAT
droYak3	3L:11642844-11643003 -		ACCGCCCATGGGCCAAGGCTGGTGATCCGGTCATCCTAGAGGAGGCTAAGGTTGG--TTCGC------------------------------------------------------TTTTATATAAACAT-GTTGAATTTCACTT---CAAG-----TATATTGAAAACATTTAGATCAAGGAGATTGCCGCTAAGAAGAAGAAGACCCCTGGACAGATCCTTAT
droEre2	scaffold_4784:11598810-11598968 -		ACCGCCCATGGGCCAAGGCTGGTGATCCGGTCATCCTAGAGGAGGCTAAGGTTGC--TTTGC-------------------------------------------------------TTTATATCAACAT-GTTGAACTTAACTT---CAAG-----TATATTTAAAACTTCTAGATCAAGGAGATTGCCGCTAAGAAGAACAAGACCCCTGGACAGATCCTTAT

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droPer2

ACCGTCCCTGGGCCAAGTCTGGCGATCCAGTGATTCTAGAGGAGCCTAAGGTACT--T---------------------------GCGAGTGCATTTGATTTGTTCTCAATATAC-CGTC---------------AATTTCATAT---TTTT-----CATT----TATTTTATAGATTAAGGAGATTGCTGAAAAGAAGAAGAAGACACCTGGACAGATTCTCAT	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
.....................................................................................................................................................................................................AGAAGAAGACACCTGGAC..........	18	1	19.00	19	19	0	0	0	0	0
..............................................................................................................................................................................................GAAAAGAAGAAGAAGACACCTGGAC..........	25	1	12.00	12	12	0	0	0	0	0
...................................................................................................................................................................................................GAAGAAGAAGACACCTGGAC..........	20	1	7.00	7	6	0	1	0	0	0
..............................................................................................................................................................................................GAAAAGAAGAAGAAGACACCTGGACAG........	27	1	6.00	6	6	0	0	0	0	0
.................................................................................................................................................................................................AAGAAGAAGAAGACACCTGGAC..........	22	1	5.00	5	5	0	0	0	0	0
.......................................................................................................................................................................................................AAGAAGACACCTGGACAG........	18	1	5.00	5	5	0	0	0	0	0
................................................................................................................................................................................................AAAGAAGAAGAAGACACCTGGACAG........	25	1	5.00	5	5	0	0	0	0	0
..............................................................................................................................................................................GATTAAGGAGATTGCTGAAA...............................	20	1	4.00	4	4	0	0	0	0	0
.....................................................................................................................................................................................GAGATTGCTGAAAAGAAGAAGA......................	22	1	4.00	4	3	0	0	0	0	1
....................................................................................................................................................................................................AAGAAGAAGACACCTGGAC..........	19	1	3.00	3	3	0	0	0	0	0
..................................................................................................................................................................................................AGAAGAAGAAGACACCTGGACAGA.......	24	1	3.00	3	3	0	0	0	0	0
..................................................................................................................................................................................................AGAAGAAGAAGACACCTGGAC..........	21	1	3.00	3	3	0	0	0	0	0
..........................................................................................................................................................................................TGCTGAAAAGAAGAAGAAGACACCTGGAC..........	29	1	2.00	2	2	0	0	0	0	0
..................CTGGCGATCCAGTGATTCTAGAGGAGCCT..................................................................................................................................................................................	29	1	2.00	2	2	0	0	0	0	0
........................................................................................................................................................................................................AGAAGACACCTGGACAGA.......	18	1	2.00	2	2	0	0	0	0	0
........................................................................................................................................................................................................AGAAGACACCTGGACAGAT......	19	1	2.00	2	2	0	0	0	0	0
..................................................................................................................................................................................AAGGAGATTGCTGAAAAGAAG..........................	21	1	2.00	2	2	0	0	0	0	0
...................................................................................................................................................................................................GAAGAAGAAGACACCTGGACAGATT.....	25	1	2.00	2	2	0	0	0	0	0
..........................................................................................................................................................................................................AAGACACCTGGACAGATTCTCAT	23	1	2.00	2	2	0	0	0	0	0
.....................................................................................................................................................................................................AGAAGAAGACACCTGGACAGA.......	21	1	2.00	2	2	0	0	0	0	0
..................................................................................................................................................................................................AGAAGAAGAAGACACCTGGACAGATTCTC..	29	1	2.00	2	1	0	0	0	0	1
......................................................................................................................................................................................................GAAGAAGACACCTGGACAG........	19	1	2.00	2	2	0	0	0	0	0
.....................................................................................................................................................................................................AGAAGAAGACACCTGGACAG........	20	1	2.00	2	2	0	0	0	0	0
....................GGCGATCCAGTGATTCTAGA.........................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0
....................................................................................................................................................................................GGAGATTGCTGAAAAGAAGAAGAA.....................	24	1	1.00	1	0	0	0	0	0	1
...................................................................................................................................................................................................GAAGAAGAAGACACCTGGACAGG.......	23	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................................AGAAGAAGACACCTGGACAGAT......	22	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................GATTAAGGAGATTGCTGAA................................	19	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................................AGAAGAAGAAGACACCTGGACAGATT.....	26	1	1.00	1	1	0	0	0	0	0
.............................GTGATTCTAGAGGAGCCTAAGA..............................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1
.....................................................................................................................................................................................................AGAAGAAGACACCTGGACA.........	19	1	1.00	1	0	0	1	0	0	0
..........................................................................................................................................................................................TGCTGAAAAGAAGAAGAAGACACCT..............	25	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................TTAAGGAGATTGCTGAAAAG.............................	20	1	1.00	1	1	0	0	0	0	0
.........................................................................................................................................................................................................GAAGACACCTGGACAGATTCTCAT	24	1	1.00	1	1	0	0	0	0	0
.......................GATCCAGTGATTCTAGAGGAGC....................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0
........................ATCCAGTGATTCTAGAGGAGCCTAA................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0
..............................................................................................................................................................................................GAAAAGAAGAAGAAGACACCTGGACAGA.......	28	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................ATTGCTGAAAAGAAGAAGAAGACACCT..............	27	1	1.00	1	1	0	0	0	0	0
......................CGATCCAGTGATTCTAGAGGAGC....................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0
....................................................................................................................................................................................................AAGAAGAAGACACCTGGACA.........	20	1	1.00	1	0	0	1	0	0	0
..........................................................................................................................................................................................................AAGACACCTGGACAGATTCT...	20	1	1.00	1	0	0	0	0	0	1
...........................................................................................................................................................................................GCTGAAAAGAAGAAGAAGACACCTG.............	25	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................................AAAGAAGAAGAAGACACCTGGACAGG.......	26	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................................AAAGAAGAAGAAGACACCTGGACA.........	24	1	1.00	1	1	0	0	0	0	0
...GTCCCTGGGCCAAGTCTGGC..........................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0
...GTCCCTGGGCCAAGTCTGGCG.........................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
..............................................................................................................................................................................GATTAAGGAGATTGCTGAAAAGAAGA.........................	26	1	1.00	1	1	0	0	0	0	0
...........................CAGTGATTCTAGAGGAGC....................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
...........................CAGTGATTCTAGAGGAGCCT..................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................GAAGAAGACACCTGGACA.........	18	1	1.00	1	0	0	1	0	0	0
........................................................................................................................................................................................................AGAAGACACCTGGACAGATT.....	20	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................ACACCTGGACAGATTCTC..	18	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................................AAAGAAGAAGAAGACACCTGGACAGAT......	27	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................GCTGAAAAGAAGAAGAAGACACCT..............	24	1	1.00	1	0	1	0	0	0	0

dp5

ACCGTCCCTGGGCCAAGTCTGGCGATCCAGTGATTCTAGAGGAGCCTAAGGTACT--T---------------------------GCGAGTGCATTTGATTTGTTCTGAATATAC-CGTC---------------AATTTCATAT---TTTT-----CATT----TATTTTATAGATTAAGGAGATTGCTGAAAAGAAGAAGAAGACACCTGGACAGATTCTCAT	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
...GTCCCTGGGCCAAGTCTGGC..........................................................................................................................................................................................................	20	1	8.00	8	0	8	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................GAAAAGAAGAAGAAGACACCTGGAC..........	25	1	5.00	5	0	5	0	0	0	0	0	0	0	0
...............................GATTCTAGAGGAGCCTAAG...............................................................................................................................................................................	19	1	4.00	4	0	4	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................AAGAAGAAGAAGACACCTGGAC..........	22	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................AGAAGAAGACACCTGGAC..........	18	1	2.00	2	0	2	0	0	0	0	0	0	0	0
......................CGATCCAGTGATTCTAGAG........................................................................................................................................................................................	19	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................GAAAAGAAGAAGAAGACACCTG.............	22	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................GAGATTGCTGAAAAGAAGAAGAAG....................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	2
................................................................................................................................................................................................AAAGAAGAAGAAGACACCTGGAC..........	23	1	2.00	2	0	1	1	0	0	0	0	0	0	0
............................................................................................................................................................................................................GACACCTGGACAGATTCTC..	19	1	2.00	2	0	0	0	2	0	0	0	0	0	0
......................................................................................................................................................................................AGATTGCTGAAAAGAAGAAGAAG....................	23	1	2.00	2	0	2	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................GCTGAAAAGAAGAAGAAGACACCTGGAC..........	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................GAGATTGCTGAAAAGAAGAAGAAGAC..................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	1
..................................................................................................................................................................................................AGAAGAAGAAGACACCTGGAC..........	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................TTGCTGAAAAGAAGAAGAAG....................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0
..............................................................................................................................................................................................GAAAAGAAGAAGAAGACACCTGGACAG........	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0
..........GGCCAAGTCTGGCGATCCAGT..................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................AAGGAGATTGCTGAAAAGAAGAAGA......................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0
..........................................................................................................................................................................................TGCTGAAAAGAAGAAGAAGA...................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................AGATTGCTGAAAAGAAGAA........................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
ACCGTCCCTGGGCCAAGTCTGGC..........................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0
..............................................................................................................................................................................GATTAAGGAGATTGCTGAAAAGAAGA.........................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................GATCCAGTGATTCTAGAGGA......................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................AAAAGAAGAAGAAGACACCTGG............	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................AGAAGAAGAAGACACCTGGACA.........	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................GTCTGGCGATCCAGTGATTCTA...........................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................TCTGGCGATCCAGTGATTCTAGAGGA......................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.CCGTCCCTGGGCCAAGTC..............................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...GTCCCTGGGCCAAGTCTGGCG.........................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................CATT----TATTTTATAGATTAAGGAGATTGCT...................................	29	1	1.00	1	0	0	1	0	0	0	0	0	0	0
............CCAAGTCTGGCGATCCAGT..................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...GTCCCTGGGCCAAGTCTG............................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......CCTGGGCCAAGTCTGGCGATCCA....................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0
...............................................................................................................................................................................ATTAAGGAGATTGCTGAAAAG.............................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................GATCCAGTGATTCTAGAGG.......................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................GAAGAAGACACCTGGACAG........	19	1	1.00	1	1	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................AAAAGAAGAAGAAGACACCTGGAC..........	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0
....................................................................................................TTGTTCTGAATATAC-CGTC---------------AAT.......................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0
..CGTCCCTGGGCCAAGTCTG............................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................CGATCCAGTGATTCTAGAGGA......................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................GAAGAAGAAGACACCTGGACAGA.......	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................GATTGCTGAAAAGAAGAAGAAGA...................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................TTAAGGAGATTGCTGAAAAGAAGAAGA......................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	1
.....................................................................................................................................................................................................AGAAGAAGACACCTGGACA.........	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................ACACCTGGACAGATTCTCAT	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0
..........................................................................................................................................................................................................AAGACACCTGGACAGATTCTC..	21	1	1.00	1	0	0	0	0	0	1	0	0	0	0
ACCGTCCCTGGGCCAAGTCTGG...........................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................AGGAGATTGCTGAAAAGAAGAA........................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0
...............................................................................................................................................................................ATTAAGGAGATTGCTGAAAAGA............................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................TTAAGGAGATTGCTGAAAA..............................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0
.......................................................................................................................................................................................................AAGAAGACACCTGGACAGATTCTCA.	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0
.................................................................................................................................................................................TAAGGAGATTGCTGAAAAGAAGAAGA......................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................ATTAAGGAGATTGCTGAAAA..............................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................AAAGAAGAAGAAGACACCTG.............	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................AGGAGATTGCTGAAAAGAAGAAGAA.....................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	1
........................................................................................................................................................................................ATTGCTGAAAAGAAGAAGA......................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................GATTGCTGAAAAGAAGAAGAAGACACCT..............	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................AGAAGACACCTGGACAGATTCTC..	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................AAGAAGAAGACACCTGGAC..........	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................AGAAGAAGACACCTGGACAGA.......	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................ATTGCTGAAAAGAAGAAGAAG....................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................TAAGGAGATTGCTGAAAAGAAGAAGAAG....................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................GATTAAGGAGATTGCTGAAAAGAA...........................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..CGTCCCTGGGCCAAGTCTGGCGATC......................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0
..CGTCCCTGGGCCAAGTCTGGC..........................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................AAGAAGAAGACACCTGGACA.........	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................GTCTGGCGATCCAGTGATTCTAGAG........................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................GAAAAGAAGAAGAAGACACCT..............	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................GCGATCCAGTGATTCTAGAGGAGC....................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................GGCGATCCAGTGATTCTAGA.........................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	1
.........................................................................................................................................................................................TTGCTGAAAAGAAGAAGAAGACACCTG.............	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................ATCCAGTGATTCTAGAGGA......................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................GAAGAAGAAGACACCTGGAC..........	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................CTGAAAAGAAGAAGAAGACACCTGGAC..........	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................TTAAGGAGATTGCTGAAAAG.............................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0
........................................................................................................................................................................................ATTGCTGAAAAGAAGAAGAAGACACCT..............	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0
................................................................................................................................................................................................AAAGAAGAAGAAGACACCTGGACAG........	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................GAAGACACCTGGACAGATTCTC..	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0

droWil2

ATCGTCCATGGGCCAAGAAGGGTGATCCTGTCATCCTAGAGGAGCCTAAGGTTAG--CTCTC----------------------------------------------AATAGCTCTCTCACATTCACAT-TT-GTAATTATTTT---CATG-----TATGGATTTTTTTAATAGATTAAGGAACTTGCTGCGAAAAAGAATAAGACCGCCGGACAGATTCTTAT	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
...GTCCATGGGCCAAGAAGGGT..........................................................................................................................................................................................................	20	1	34.00	34	0	0	10	24	0
..CGTCCATGGGCCAAGAAGGGT..........................................................................................................................................................................................................	21	1	13.00	13	0	1	4	7	1
........................................................................................................................................................................................................ATAAGACCGCCGGACAGATTCTT..	23	1	9.00	9	0	0	1	8	0
........................ATCCTGTCATCCTAGAGGAGC....................................................................................................................................................................................	21	1	9.00	9	0	0	2	7	0
.......................GATCCTGTCATCCTAGAGGAGC....................................................................................................................................................................................	22	1	9.00	9	0	0	5	4	0
.....CCATGGGCCAAGAAGGGT..........................................................................................................................................................................................................	18	1	7.00	7	0	1	0	6	0
ATCGTCCATGGGCCAAGAAGGGT..........................................................................................................................................................................................................	23	1	7.00	7	0	0	5	2	0
........................................................................................................................................................................................................ATAAGACCGCCGGACAGATT.....	20	1	5.00	5	0	0	1	4	0
..CGTCCATGGGCCAAGAAGGGTG.........................................................................................................................................................................................................	22	1	5.00	5	0	0	1	4	0
.................................................................................................................................................................................TAAGGAACTTGCTGCGAAAAAGA.........................	23	1	5.00	5	0	0	4	1	0
..............................................................................................................................................................................GATTAAGGAACTTGCTGC.................................	18	1	4.00	4	0	0	0	4	0
.......................................................................................................................................................................................................AATAAGACCGCCGGACAGATTCTT..	24	1	4.00	4	0	0	1	3	0
..........................................................................................................................................................................................................AAGACCGCCGGACAGATTCTT..	21	1	4.00	4	0	0	0	4	0
..............................................................................................................................................................................GATTAAGGAACTTGCTGCGA...............................	20	1	4.00	4	0	1	3	0	0
..............................................................................................................................................................................................................CCGCCGGACAGATTCTTAT	19	1	4.00	4	4	0	0	0	0
..............................................................................................................................................................................GATTAAGGAACTTGCTGCGAAAAAGA.........................	26	1	4.00	4	0	0	3	1	0
ATCGTCCATGGGCCAAGAAG.............................................................................................................................................................................................................	20	1	3.00	3	0	0	1	2	0
..........GGCCAAGAAGGGTGATCCTGT..................................................................................................................................................................................................	21	1	3.00	3	0	1	0	2	0
...........................CTGTCATCCTAGAGGAGC....................................................................................................................................................................................	18	1	3.00	3	2	0	0	1	0
.......................GATCCTGTCATCCTAGAGG.......................................................................................................................................................................................	19	1	3.00	3	0	0	0	3	0
................................................................................................................................................................................................GAAAAAGAATAAGACCGCCG.............	20	1	3.00	3	0	0	3	0	0
..............................................................................................................................................................................GATTAAGGAACTTGCTGCGAAAAAG..........................	25	1	3.00	3	0	0	1	2	0
...................................................................................................................................................................................................AAAGAATAAGACCGCCGGACA.........	21	1	3.00	3	0	0	3	0	0
...............................................................................................................................................................................ATTAAGGAACTTGCTGCGAAAAAGA.........................	25	1	3.00	3	0	0	1	2	0
................................................................................................................................................................................................GAAAAAGAATAAGACCGCC..............	19	1	2.00	2	0	1	0	1	0
ATCGTCCATGGGCCAAGAAGGGTG.........................................................................................................................................................................................................	24	1	2.00	2	0	0	2	0	0
.......................................................................................................................................................................................................AATAAGACCGCCGGACAGATTC....	22	1	2.00	2	2	0	0	0	0
.....................................................................................................................................................................................................AGAATAAGACCGCCGGACAGATT.....	23	1	2.00	2	1	0	0	0	1
............................................................................................................................................................................................................GACCGCCGGACAGATTCTT..	19	1	2.00	2	0	0	0	2	0
.......ATGGGCCAAGAAGGGTGATCCTGT..................................................................................................................................................................................................	24	1	2.00	2	0	0	1	1	0
...GTCCATGGGCCAAGAAGGGTG.........................................................................................................................................................................................................	21	1	2.00	2	0	0	1	1	0
..........................................................................................................................................................................................................AAGACCGCCGGACAGATT.....	18	1	2.00	2	1	0	0	1	0
.........................................................................................................................................................................................................TAAGACCGCCGGACAGATTC....	20	1	2.00	2	1	0	1	0	0
......................................................................................................................................................................................................GAATAAGACCGCCGGACAGA.......	20	1	2.00	2	1	0	1	0	0
....TCCATGGGCCAAGAAGGGT..........................................................................................................................................................................................................	19	1	2.00	2	0	0	1	1	0
.......................GATCCTGTCATCCTAGAGGAGCCTA.................................................................................................................................................................................	25	1	2.00	2	0	0	1	1	0
............................................................................................................................................................................................................GACCGCCGGACAGATTCT...	18	1	2.00	2	0	0	0	2	0
.............................................................................................................................................................................AGATTAAGGAACTTGCTGC.................................	19	1	2.00	2	0	1	0	1	0
........................................................................................................................................................................................................ATAAGACCGCCGGACAGA.......	18	1	2.00	2	0	0	0	2	0
...GTCCATGGGCCAAGAAGGGTGATC......................................................................................................................................................................................................	24	1	2.00	2	0	0	1	1	0
................................................................................................................................................................................TTAAGGAACTTGCTGCGAAAAAGA.........................	24	1	2.00	2	0	1	0	1	0
.....................GTGATCCTGTCATCCTAGAGGAGC....................................................................................................................................................................................	24	1	2.00	2	0	0	1	1	0
.......................GATCCTGTCATCCTAGAGGAGCCTAAG...............................................................................................................................................................................	27	1	2.00	2	0	0	2	0	0
................................................................................................................................................................................................GAAAAAGAATAAGACCGCCGGACAGAT......	27	1	2.00	2	0	0	2	0	0
..................................................................................................................................................................................................AAAAGAATAAGACCGCCGGACA.........	22	1	2.00	2	0	0	1	1	0
..................................................................................................................................................................................................AAAAGAATAAGACCGCCGGA...........	20	1	1.00	1	0	0	0	1	0
...............................................................................................................................................................................................CGAAAAAGAATAAGACCGCCGGACA.........	25	1	1.00	1	0	0	1	0	0
........................................................................................................................................................................................................ATAAGACCGCCGGACAGG.......	18	1	1.00	1	1	0	0	0	0
................................................................................................................................................................................................GAAAAAGAATAAGACCGCCGG............	21	1	1.00	1	0	0	1	0	0
..........................................................................................................................................................................................................AAGACCGCCGGACAGATTCTTAT	23	1	1.00	1	0	0	0	1	0
........................................................................................................................................................................................................ATAAGACCGCCGGACAGAT......	19	1	1.00	1	0	0	0	1	0
...........................CTGTCATCCTAGAGGAGCCT..................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0
...................................................................................................................................................................................................AAAGAATAAGACCGCCGGACAGAT......	24	1	1.00	1	1	0	0	0	0
....................................................................................................................................................................................................AAGAATAAGACCGCCGGACAGATTC....	25	1	1.00	1	1	0	0	0	0
....TCCATGGGCCAAGAAGGGTGATC......................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0
...................................................................................................................................................................................................AAAGAATAAGACCGCCGGACAGA.......	23	1	1.00	1	0	0	1	0	0
...............................................................................................................................................................................................CGAAAAAGAATAAGACCGC...............	19	1	1.00	1	0	0	0	0	1
......................................................................................................................................................................................................GAATAAGACCGCCGGACAGATTC....	23	1	1.00	1	1	0	0	0	0
........................ATCCTGTCATCCTAGAGGAGCCTAAG...............................................................................................................................................................................	26	1	1.00	1	0	0	1	0	0
......CATGGGCCAAGAAGGGTGA........................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0
.............................................................................................................................................................................................................ACCGCCGGACAGATTCTT..	18	1	1.00	1	0	0	1	0	0
.............................GTCATCCTAGAGGAGCCTAAG...............................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0
................................................................................................................................................................................TTAAGGAACTTGCTGCGAAAAAG..........................	23	1	1.00	1	0	0	1	0	0
....................................................................................................................................................................................................AAGAATAAGACCGCCGGACAGATT.....	24	1	1.00	1	0	0	1	0	0
.....CCATGGGCCAAGAAGGGTG.........................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0
.....................GTGATCCTGTCATCCTAGAGGAGCCTA.................................................................................................................................................................................	27	1	1.00	1	0	0	1	0	0
...............................................................................................................................................................................ATTAAGGAACTTGCTGCGAAAAAG..........................	24	1	1.00	1	0	1	0	0	0
..............................................................................................................................................................................................................CCGCCGGACAGATTCTTA.	18	1	1.00	1	0	0	0	1	0
..................................................................................................................................................................................................AAAAGAATAAGACCGCCGGACAG........	23	1	1.00	1	0	0	1	0	0
.....................................................................................................................................................................................GAACTTGCTGCGAAAAAGA.........................	19	1	1.00	1	0	0	0	1	0
.............................................................................................................................................................................................TGCGAAAAAGAATAAGACCGCCGG............	24	1	1.00	1	0	0	1	0	0
........................ATCCTGTCATCCTAGAGGAGCCTAA................................................................................................................................................................................	25	1	1.00	1	0	0	0	1	0
..........................................................................................................................................................................................................AAGACCGCCGGACAGATTCT...	20	1	1.00	1	0	0	0	1	0
...............................CATCCTAGAGGAGCCTAAG...............................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0
...GTCCATGGGCCAAGAAGGGTGATCCT....................................................................................................................................................................................................	26	1	1.00	1	0	0	0	1	0
..........................CCTGTCATCCTAGAGGAGC....................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0
........................................................................................................................................................................................CTTGCTGCGAAAAAGAATAAGACCGC...............	26	1	1.00	1	0	0	0	1	0
..CGTCCATGGGCCAAGAAG.............................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
...............................................................................................................................................................................ATTAAGGAACTTGCTGCGAAAAA...........................	23	1	1.00	1	0	1	0	0	0
................................................................................................................................................................................TTAAGGAACTTGCTGCGA...............................	18	1	1.00	1	0	0	0	1	0
.........................................................................................................................................................................................................TAAGACCGCCGGACAGATTCTT..	22	1	1.00	1	0	0	0	1	0
........................................................................................................................................................................................CTTGCTGCGAAAAAGAAT.......................	18	1	1.00	1	0	0	0	1	0
.......................GATCCTGTCATCCTAGAGGAGCC...................................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0
.....................................................................................................................................................................................................AGAATAAGACCGCCGGACAGAT......	22	1	1.00	1	1	0	0	0	0
.....CCATGGGCCAAGAAGGGTGATC......................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0
..............................................................................................................................................................................GATTAAGGAACTTGCTGCG................................	19	1	1.00	1	0	0	1	0	0
.......................................................................................................................................................................................................AATAAGACCGCCGGACAG........	18	1	1.00	1	0	0	0	1	0
.....................................................................................................................................................................................GAACTTGCTGCGAAAAAGAAT.......................	21	1	1.00	1	0	0	0	1	0
......CATGGGCCAAGAAGGGTGATCCTGTC.................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0
................................................................................................................................................................................................GAAAAAGAATAAGACCGCCGGACAGA.......	26	1	1.00	1	0	0	1	0	0
..................................................................................................................................................................................................AAAAGAATAAGACCGCCGG............	19	1	1.00	1	0	0	0	1	0
.....................................................................................................................................................................................GAACTTGCTGCGAAAAAG..........................	18	1	1.00	1	0	1	0	0	0
...........................................................................................................................................................................................................AGACCGCCGGACAGATTCT...	19	1	1.00	1	1	0	0	0	0
.......ATGGGCCAAGAAGGGTGATC......................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0
..........................CCTGTCATCCTAGAGGAGCCTA.................................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0
.....................................................................................................................................................................................................AGAATAAGACCGCCGGACA.........	19	1	1.00	1	0	0	1	0	0
........................ATCCTGTCATCCTAGAGG.......................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
...........................................................................................................................................................................................................AGACCGCCGGACAGATTCTT..	20	1	1.00	1	0	0	0	1	0
..............AAGAAGGGTGATCCTGTCATCCT............................................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0
.......ATGGGCCAAGAAGGGTGATCCTGTC.................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0
...........GCCAAGAAGGGTGATCCTGT..................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0
................................................................................................................................................................................................GAAAAAGAATAAGACCGCCGGA...........	22	1	1.00	1	0	0	1	0	0
.......................GATCCTGTCATCCTAGAGGAGCCTAA................................................................................................................................................................................	26	1	1.00	1	0	0	1	0	0
.......................................................................................................................................................................................................AATAAGACCGCCGGACAGATTCT...	23	1	1.00	1	0	1	0	0	0
.........GGGCCAAGAAGGGTGATCCT....................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0
.TCGTCCATGGGCCAAGAAGGGTGATCC.....................................................................................................................................................................................................	27	1	1.00	1	0	0	0	1	0
......CATGGGCCAAGAAGGGTGATC......................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0
................................................................................................................................................................................................GAAAAAGAATAAGACCGCCGGACA.........	24	1	1.00	1	0	0	1	0	0
...............AGAAGGGTGATCCTGTCATCCTA...........................................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0
....TCCATGGGCCAAGAAGGGTGATCCTG...................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	1
..................................................................................................................................................................................................AAAAGAATAAGACCGCCGGAC..........	21	1	1.00	1	0	0	1	0	0
................................................................................................................................................................................TTAAGGAACTTGCTGCGAAAAA...........................	22	1	1.00	1	0	0	1	0	0
.........................................................................................................................................................................................TTGCTGCGAAAAAGAATAAGACCGC...............	25	1	1.00	1	0	0	0	1	0
.......................GATCCTGTCATCCTAGAGGAGCCTAAGA..............................................................................................................................................................................	28	1	1.00	1	0	0	1	0	0
..............................................................................................................................................................................GATTAAGGAACTTGCTGCGAA..............................	21	1	1.00	1	0	1	0	0	0
.....CCATGGGCCAAGAAGGGTGATCCTGT..................................................................................................................................................................................................	26	1	1.00	1	0	0	1	0	0
........................................................................................................................................................................................................ATAAGACCGCCGGACAGATTCTTAT	25	1	1.00	1	0	0	0	1	0
.................................................................................................................................................................................TAAGGAACTTGCTGCGAAAAA...........................	21	1	1.00	1	0	0	1	0	0
.......ATGGGCCAAGAAGGGTGAT.......................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1
..........................................................................................................................................................................................TGCTGCGAAAAAGAATAAGACCGCCGGA...........	28	1	1.00	1	0	0	1	0	0
ATCGTCCATGGGCCAAGAA..............................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0
.......................GATCCTGTCATCCTAGAGGAGCCT..................................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0
.......................................................................................................................................................................................................AATAAGACCGCCGGACAGATT.....	21	1	1.00	1	0	0	1	0	0
............................TGTCATCCTAGAGGAGCCTAAGA..............................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0
................................................................................................................................................................................TTAAGGAACTTGCTGCGAAAAAGAATAA.....................	28	1	1.00	1	0	0	1	0	0

droVir3

ACCGTCCTTGGGCCAAGGAGGGTGATCCCGTGATTCTAGAGGAACAAGCCGTAAG--TCAAT------------------TAAGTGAAAATGCA-------------CAACAGAC--------------T-GT------TCAACATTTAAAC--------TGTATCCTCTTTTAGATTAAGGACATTGCTGAATCAAAGAAAAAGACACCTGGACAGATTCTGAT	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
...............................................................................................................................................................................ATTAAGGACATTGCTGAATC..............................	20	1	6.00	6	0	0	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0
...GTCCTTGGGCCAAGGAGGGT..........................................................................................................................................................................................................	20	1	4.00	4	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................GATCCCGTGATTCTAGAGGAACAA..................................................................................................................................................................................	24	1	3.00	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................AGACACCTGGACAGATTCTG..	20	1	3.00	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................AAAAGACACCTGGACAGATTCT...	22	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....CCTTGGGCCAAGGAGGGTGATCCCGT..................................................................................................................................................................................................	26	1	3.00	3	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................AGACACCTGGACAGATTCT...	19	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................ATTAAGGACATTGCTGAATCAA............................	22	1	3.00	3	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........GCCAAGGAGGGTGATCCCGTGATT..............................................................................................................................................................................................	24	1	3.00	3	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.............CAAGGAGGGTGATCCCGTGATT..............................................................................................................................................................................................	22	1	3.00	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................AAAAGACACCTGGACAGATTCTGAT	25	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................CACCTGGACAGATTCTGAT	19	1	2.00	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
..........................................................................................................................................................................................................AAGACACCTGGACAGATTCTG..	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..................................................................................................................................................................................................CAAAGAAAAAGACACCTGGACAGAT......	25	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................GATCCCGTGATTCTAGAGGAACAAG.................................................................................................................................................................................	25	1	2.00	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.......................................................................................................................................................................................................AAAAAGACACCTGGACAGATTCT...	23	1	2.00	2	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................CCGTGATTCTAGAGGAACA...................................................................................................................................................................................	19	1	2.00	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................AAAGACACCTGGACAGATTCT...	21	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................GACACCTGGACAGATTCT...	18	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................CAAAGAAAAAGACACCTGGACAGATT.....	26	1	2.00	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....CCTTGGGCCAAGGAGGGT..........................................................................................................................................................................................................	18	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........GGCCAAGGAGGGTGATCCCGT..................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0
............................................................................................................................................................................................................GACACCTGGACAGATTCTGA.	20	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................GAGGGTGATCCCGTGATTCTAGA.........................................................................................................................................................................................	23	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..CGTCCTTGGGCCAAGGAGG............................................................................................................................................................................................................	19	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................AAAGAAAAAGACACCTGGACA.........	21	1	2.00	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................GATCCCGTGATTCTAGAGGAAC....................................................................................................................................................................................	22	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...............................................................................................................................................................................ATTAAGGACATTGCTGAAT...............................	19	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0
............................CGTGATTCTAGAGGAACA...................................................................................................................................................................................	18	1	2.00	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................ATCCCGTGATTCTAGAGGAACA...................................................................................................................................................................................	22	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......CTTGGGCCAAGGAGGGTGATCCCGT..................................................................................................................................................................................................	25	1	2.00	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................AAAGACACCTGGACAGATT.....	19	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................CAAAGAAAAAGACACCTGGAC..........	21	1	2.00	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................AGACACCTGGACAGATTCTGAT	22	1	2.00	2	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................GATCCCGTGATTCTAGAG........................................................................................................................................................................................	18	1	2.00	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......CTTGGGCCAAGGAGGGTGATC......................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
ACCGTCCTTGGGCCAAGGAGGGT..........................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....CCTTGGGCCAAGGAGGGA..........................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................AGAAAAAGACACCTGGACA.........	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................AAGACACCTGGACAGATTCTGAT	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................AAAAAGACACCTGGACAG........	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................GAAAATGCA-------------CAACAGAC--------------T-GT------T.....................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......CTTGGGCCAAGGAGGGTGATCCCG...................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................TAAGGACATTGCTGAATCAAA...........................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........TGGGCCAAGGAGGGTGATCCC....................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................ATCAAAGAAAAAGACACCTGG............	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................GAATCAAAGAAAAAGACACCTGGAC..........	25	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....CCTTGGGCCAAGGAGGGTGATCCCGC..................................................................................................................................................................................................	26	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................TGAATCAAAGAAAAAGACACCTGGACA.........	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............AAGGAGGGTGATCCCGTGATT..............................................................................................................................................................................................	21	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................GCTGAATCAAAGAAAAAGACAC................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...GTCCTTGGGCCAAGGAGGGTG.........................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................GTGATTCTAGAGGAACAAGCC...............................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................TTAAGGACATTGCTGAAT...............................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................AAAGAAAAAGACACCTGGAC..........	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................CCGTGATTCTAGAGGAACAA..................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........TGGGCCAAGGAGGGTGATCC.....................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................AAAAGACACCTGGACAGATTCTGG.	24	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................AAGGACATTGCTGAATCAAA...........................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........TGGGCCAAGGAGGGTGATCCCGT..................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................GGGTGATCCCGTGATTCTAGAG........................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................CAAAGAAAAAGACACCTGGACA.........	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................GGTGATCCCGTGATTCTAGAG........................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................GAAAAAGACACCTGGACAGATTCTG..	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................GCTGAATCAAAGAAAAAGACACCTG.............	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............CAAGGAGGGTGATCCCGTGA................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................ATCAAAGAAAAAGACACCT..............	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........GGCCAAGGAGGGTGATCCCGTGA................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........GCCAAGGAGGGTGATCCCG...................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................GATTCTAGAGGAACAAGC................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................AAGAAAAAGACACCTGGACAGATT.....	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........GGCCAAGGAGGGTGATCCCG...................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
........................ATCCCGTGATTCTAGAGGAACAAGC................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........GCCAAGGAGGGTGATCCCGTGAT...............................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................ATCCCGTGATTCTAGAGGAAC....................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.CCGTCCTTGGGCCAAGGAGGGT..........................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........GGGCCAAGGAGGGTGATCCCGT..................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................AAAGAAAAAGACACCTGGACAGATTCT...	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................AAAGAAAAAGACACCTGGACAGG.......	23	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............CCAAGGAGGGTGATCCCGT..................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................CAAAGAAAAAGACACCTGGACAG........	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................GTGATCCCGTGATTCTAGAGGAACAAGC................................................................................................................................................................................	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................GATCCCGTGATTCTAGAGGAA.....................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................GACACCTGGACAGATTCTGAT	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............AAGGAGGGTGATCCCGTGATTCTAGAGG.......................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.................................................................................................................................................................................................TCAAAGAAAAAGACACCTGGA...........	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......CTTGGGCCAAGGAGGGTGATCCCGTG.................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
ACCGTCCTTGGGCCAAGGAGG............................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................AGAAAAAGACACCTGGACAGATT.....	23	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................GGAGGGTGATCCCGTGATTCTAGAGGA......................................................................................................................................................................................	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........GGGCCAAGGAGGGTGATCCCGTGAT...............................................................................................................................................................................................	25	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................GGACATTGCTGAATCAAAGAAA.......................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........TGGGCCAAGGAGGGTGATCCCGTG.................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................AAGAAAAAGACACCTGGACAGA.......	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........GGGCCAAGGAGGGTGATCC.....................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................GAGGGTGATCCCGTGATTCTAGAG........................................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................ACACCTGGACAGATTCTGA.	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................GTGATCCCGTGATTCTAGAG........................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................AAGAAAAAGACACCTGGACAGATTCT...	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................TTAAGGACATTGCTGAATC..............................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............AAGGAGGGTGATCCCGTGATTCT............................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.....................................................................................................................................................AAC--------TGTATCCTCTTTTAG..................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........GCCAAGGAGGGTGATCCCGT..................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....CCTTGGGCCAAGGAGGGTG.........................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
ACCGTCCTTGGGCCAAGGAG.............................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................GATTCTAGAGGAACAAGCC...............................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................CCGTGATTCTAGAGGAACAAGCC...............................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
...........................................................................................................................................................................................................AGACACCTGGACAGATT.....	17	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
..................................................................................................................................................................................................CAAAGAAAAAGACACCTGGACAGATTCT...	28	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........GGCCAAGGAGGGTGATCCCGTGATT..............................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............CCAAGGAGGGTGATCCCGTGA................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..................AGGGTGATCCCGTGATTCTAGAG........................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..CGTCCTTGGGCCAAGGAGGGTG.........................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................CCCGTGATTCTAGAGGAACA...................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................GATCCCGTGATTCTAGAGGA......................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................GTGATCCCGTGATTCTAGAGGAACAA..................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................AAAGAAAAAGACACCTGGACAGATTCTG..	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......CTTGGGCCAAGGAGGGTGATCCC....................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................GACATTGCTGAATCAAAGA.........................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................ATTAAGGACATTGCTGAATCAAAGAA........................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................GAATCAAAGAAAAAGACACCT..............	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........TGGGCCAAGGAGGGTGATCCCGTGA................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................TGCTGAATCAAAGAAAAAGACACCTG.............	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................GGGTGATCCCGTGATTCTAGAGG.......................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

ATCGCCCATGGGCCAAGGAAGGTGATCCGGTTATTCTAGAAGAGAAAAAGGTAAA--ATAGG-TTTAGATAGCTCAA--CTAAAGG----------------------AACTAAC--------------T-GA------GCAACC---------------TCTAAAATCTTCTAGATCAAGGAAATTGCTGCTGCCAAAAACAAGACACCCGGACAGATTTTGAT	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
ATCGCCCATGGGCCAAGGAAGGT..........................................................................................................................................................................................................	23	1	6.00	6	2	0	0	0	0	4
.........GGGCCAAGGAAGGTGATCCGGTT.................................................................................................................................................................................................	23	1	5.00	5	2	0	0	0	0	3
..........GGCCAAGGAAGGTGATCCGGTT.................................................................................................................................................................................................	22	1	4.00	4	1	0	0	0	0	3
...........GCCAAGGAAGGTGATCCGGTT.................................................................................................................................................................................................	21	1	3.00	3	1	0	0	0	0	2
.......................GATCCGGTTATTCTAGAAGAGA....................................................................................................................................................................................	22	1	2.00	2	2	0	0	0	0	0
...........GCCAAGGAAGGTGATCCGGT..................................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	0	2
.......................GATCCGGTTATTCTAGAAG.......................................................................................................................................................................................	19	1	2.00	2	2	0	0	0	0	0
.......................GATCCGGTTATTCTAGAAGAGAAAAA................................................................................................................................................................................	26	1	2.00	2	0	0	0	0	0	2
...........GCCAAGGAAGGTGATCCGGTTATT..............................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................AGATCAAGGAAATTGCTGCTGCCA............................	24	1	1.00	1	0	0	0	0	0	1
..............................................................................................................................................................................GATCAAGGAAATTGCTGCTGCCA............................	23	1	1.00	1	0	0	0	0	0	1
..............................................................................................................................................................................GATCAAGGAAATTGCTGCTGCCAAAA.........................	26	1	1.00	1	1	0	0	0	0	0
.........GGGCCAAGGAAGGTGATCCGGT..................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1
.......................GATCCGGTTATTCTAGAAGAGAAAA.................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	1
...............................................................................................................................................................................ATCAAGGAAATTGCTGCTGC..............................	20	1	1.00	1	0	0	0	0	0	1
.................................................................................................................................................................................CAAGGAAATTGCTGCTGCC.............................	19	1	1.00	1	0	0	0	0	0	1
.......................GATCCGGTTATTCTAGAAGA......................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................ATTGCTGCTGCCAAAAACAAGA...................	22	1	1.00	1	1	0	0	0	0	0
...........GCCAAGGAAGGTGATCCGGTTA................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
.........GGGCCAAGGAAGGTGATCCGGTTAT...............................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	1
.................................................................................................................AC--------------T-GA------GCAACC---------------TCTAAAATCTT......................................................	22	1	1.00	1	1	0	0	0	0	0
................................................................................................................AAC--------------T-GA------GCAACC---------------TCTAAAATCTTC.....................................................	24	1	1.00	1	0	0	0	0	1	0
.........GGGCCAAGGAAGGTGATCCG....................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1
.............................................................................................................................................................................................................ACACCCGGACAGATTTTGA.	19	1	1.00	1	0	0	1	0	0	0
..............AAGGAAGGTGATCCGGTTATTCTAGAAG.......................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................TCAAGGAAATTGCTGCTGCCA............................	21	1	1.00	1	1	0	0	0	0	0
.......................GATCCGGTTATTCTAGAAGAG.....................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
.........GGGCCAAGGAAGGTGATCCGGTTA................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
..CGCCCATGGGCCAAGGAAGGT..........................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
.TCGCCCATGGGCCAAGGAAGGT..........................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1
..............................................................................................................................................................................GATCAAGGAAATTGCTGCT................................	19	1	1.00	1	0	0	0	1	0	0
.........GGGCCAAGGAAGGTGATCCGGTTATT..............................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	1
..........GGCCAAGGAAGGTGATCCGGT..................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0

droGri2

ATCGTCCATGGGCCAAACCGGGTGATCCAGTTATCCTGGAGGAAGAAGCTGTAAG--CCGTA---------------ACATAACTAACATAACA-------------TAACGA--------------ATA-GT------TCTTTC---TCTA-----CAGTTTGTCCTCTTATAGATTAAGAAAATCGCTCAGGCCAAGAATAAGACACCTGGCCAAATTCTGAT	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
........................................................................................................................................................................................................ATAAGACACCTGGCCAAATTCTG..	23	1	1.00	1	1	0
...........GCCAAACCGGGTGATCCAGTTAT...............................................................................................................................................................................................	23	1	1.00	1	1	0
..........................................................................................................................................................................................CGCTCAGGCCAAGAATAAGACACC...............	24	1	1.00	1	1	0
........................ATCCAGTTATCCTGGAGGAAGAAGC................................................................................................................................................................................	25	1	1.00	1	0	1
.............................GTTATCCTGGAGGAAGAAGCT...............................................................................................................................................................................	21	1	1.00	1	0	1
.................................................................................................................................................................................................GCCAAGAATAAGACACCTG.............	19	1	1.00	1	1	0

droAna3

ACCGTCCCTGGGCCAAGGAAGGTGATCCGGTCATCCTGGAGGAGCCAAAGGTAAA--ACTAATTTTAAATA------------------------------GT----G------------------ATTA-G-----AAAAATCA---TAAT-----TAAAATTTATATCCTCAGATCAAGGAGCTGGCTGCCAAGCTGAAGAAGACTCCTGGACAGGTCCTGAT	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
.......................GATCCGGTCATCCTGGAGGAGC....................................................................................................................................................................................	22	1	12.00	12	1	0	0	0	10	1
...................................................................................................................................................................................................GCTGAAGAAGACTCCTGGACAG........	22	1	4.00	4	0	0	1	0	0	3
.....................................................................................................................................................................................................TGAAGAAGACTCCTGGACAGGTCCT...	25	1	3.00	3	1	0	0	0	2	0
.......................GATCCGGTCATCCTGGAGGAGCCAAA................................................................................................................................................................................	26	1	3.00	3	0	0	0	0	3	0
........................................................................................................................................................................................................AGAAGACTCCTGGACAGGTCCT...	22	1	2.00	2	1	0	0	1	0	0
........................ATCCGGTCATCCTGGAGGAGC....................................................................................................................................................................................	21	1	2.00	2	1	0	0	0	1	0
...........GCCAAGGAAGGTGATCCGGT..................................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	2	0
..........................CCGGTCATCCTGGAGGAGC....................................................................................................................................................................................	19	1	2.00	2	0	0	0	1	0	1
ACCGTCCCTGGGCCAAGGAAGGC..........................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0
...................................................................................................................................................................................................GCTGAAGAAGACTCCTGGACAGGT......	24	1	1.00	1	0	1	0	0	0	0
..................................................................................................................................................................................AAGGAGCTGGCTGCCAAGC............................	19	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................................AGCTGAAGAAGACTCCTGGACAGGT......	25	1	1.00	1	0	0	0	1	0	0
............................................................................................................................................................................................................GACTCCTGGACAGGTCCTG..	19	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................TCAAGGAGCTGGCTGCCAAGC............................	21	1	1.00	1	0	0	1	0	0	0
..........GGCCAAGGAAGGTGATCCGGTCATCCTG...........................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
.........................TCCGGTCATCCTGGAGGAGC....................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0
.......CTGGGCCAAGGAAGGTGATCC.....................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0
.................................................................................................................................................................................CAAGGAGCTGGCTGCCAAGCTGAAGAA.....................	27	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................................CAAGGAGCTGGCTGCCAAGCT...........................	21	1	1.00	1	0	1	0	0	0	0
.................GAAGGTGATCCGGTCATCCTGGA.........................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0
........................................................................................................................................................................................................AGAAGACTCCTGGACAGGT......	19	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................AAGGAGCTGGCTGCCAAGCC...........................	20	1	1.00	1	0	1	0	0	0	0
....................GGTGATCCGGTCATCCTGGAGGAGCC...................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	1	0
.....................................................................................................................................................................................GAGCTGGCTGCCAAGCTGAAGA......................	22	1	1.00	1	0	1	0	0	0	0
ACCGTCCCTGGGCCAAGGAA.............................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0	0
..........................................................................................................................................................................CTCAGATCAAGGAGCTGGC....................................	19	1	1.00	1	0	0	0	0	1	0
....TCCCTGGGCCAAGGAAGGTGATC......................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0
.......................GATCCGGTCATCCTGGAGGAGCCAAAG...............................................................................................................................................................................	27	1	1.00	1	0	0	0	0	1	0
.................GAAGGTGATCCGGTCATCCTGGAGGAGC....................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	1	0
.............................................................................................................................................................................................TGCCAAGCTGAAGAAGACT.................	19	1	1.00	1	0	0	0	0	0	1
...................................................................................................................................................................................................GCTGAAGAAGACTCCTGGACA.........	21	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................ATCAAGGAGCTGGCTGCCAAGCTGAA........................	26	1	1.00	1	0	0	0	0	1	0
...........................................................................................................................................................................................................AGACTCCTGGACAGGTCC....	18	1	1.00	1	1	0	0	0	0	0
........TGGGCCAAGGAAGGTGATCCGGTC.................................................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0	0
.....................................................................................................................................................................................................TGAAGAAGACTCCTGGACAGGTC.....	23	1	1.00	1	0	0	0	0	1	0
.......................GATCCGGTCATCCTGGAGGAGCC...................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0
....................GGTGATCCGGTCATCCTGGAGGAGC....................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0
..........GGCCAAGGAAGGTGATCCGGTC.................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
.....................................................................................................................................................................................................TGAAGAAGACTCCTGGACG.........	19	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................TCAAGGAGCTGGCTGCCAA..............................	19	1	1.00	1	1	0	0	0	0	0
...................AGGTGATCCGGTCATCCTGGAGGAGC....................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0
........TGGGCCAAGGAAGGTGATCCGGT..................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0
........TGGGCCAAGGAAGGTGAT.......................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	1
................GGAAGGTGATCCGGTCATCCTGGAGGA......................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................GATCAAGGAGCTGGCTGCCAAGCT...........................	24	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................GAAGAAGACTCCTGGACA.........	18	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................AAGGAGCTGGCTGCCAAGCTGA.........................	22	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................................CAAGGAGCTGGCTGCCAAGC............................	20	1	1.00	1	0	1	0	0	0	0
...GTCCCTGGGCCAAGGAAGGTGATCC.....................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	1	0
..............................................................................................................................................................................GATCAAGGAGCTGGCTGCCAA..............................	21	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................ATCAAGGAGCTGGCTGCCAAGCTGA.........................	25	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................................................GCTGAAGAAGACTCCTGGACAGGTCCT...	27	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................................................................................GCTGGCTGCCAAGCTGAAGAAGA...................	23	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................CTGAAGAAGACTCCTGGAC..........	19	1	1.00	1	0	1	0	0	0	0
.................................................................................................................................................................................CAAGGAGCTGGCTGCCAAGCTGAAGAAG....................	28	1	1.00	1	0	0	0	0	1	0

droBip1

ACCGCCCCTGGGCCAAGGAAGGCGATCCGGTCATTCTGGAGGAGCCAAAGGTACA--ATGAATT-----------------------------ATTAAATCTGG---------------------------CTTGGATGTACCTT---AATC-----CG-AACTTTAATTCACAGATCAAGGAGCTGGCTGCCAAACTGAAGAAGACCCCTGGACAGGTTCTGAT	Size	Hit Count	Total Norm	Total
No Reads

droKik1

ACCGCCCCTGGGCCAAGGCTGGTGATCCGGTCATCCTGGAGGAACCTAAGGTGGA--TATTT-----------------------------------------------------TAGTAATATTTA-------AAAATAAACAT---AAATTTACATAACATTTTTAATCATAGATCAAGGAACTGGCAGCCAAGAAGAACAAGACCCCGGGACAGATTCTTAT	Size	Hit Count	Total Norm	Total
No Reads

droFic1

ATCGCCCATGGGCCAAGGCCGGCGATCCGGTCATCCTCGAGGAGGCTAAGGTATG--TTAAT---------------TCTTAGTAAGGAAATTA-------------TTTTGC---TT------------------ATTTAATTT---CAAT-----TATATAATACTGTTTCAGATCAAGGAGATCGCAGCCGCGAAAAACAAAACTCCTGGACAGATCCTCAT	Size	Hit Count	Total Norm	Total
No Reads

droEle1

ACCGTCCATGGGCCAAAGCTGGCGACCCAGTCATTCTAGAGGAGGCAAAGGTATG--TTCAT------------------------------------------------------TATTACTTTGGGTA-GTTTAGTATAACTA---A-AA-----TACAACTTACACCTATAGATCAAGGAGATAGCCACCAAGAAAAACAAGACTCCTGGACAGATCCTCAT	Size	Hit Count	Total Norm	Total
No Reads

droRho1

ACCATCCATGGTTCAAGGCTGGCGACCCGGTCATCCTAGAAGAGCCTAAGGTATG--TTTAA------------------------------------------------------TATTACATGGACTA-GTTTAATTTGACTA---A-AA-----TATGTCTTCAACTTATAGATCAAGGAGATTGCTACCAAGAAAAACAAGACACCTGGACAGATCCTCAT	Size	Hit Count	Total Norm	Total
No Reads

droBia1

ACCGCCCATGGGCCAAGGCTGGTGATCCGGTCATCCTAGAGGAGGCTAAGGTATG--TTTTC------------------------------------------------------TGTCATACAAAGAA-GTTAAATTACACTT---AAATTGTTGTGTGCTTTAAATTTGTAGATCAAGGAGATTGCCGCCAAGAAGAACAAGACTCCTGGACAGATCCTCAT	Size	Hit Count	Total Norm	Total
No Reads

droTak1

ACCGCCCATGGGCCAAGGCTGGCGATCCGGTCATCCTAGAGGAGGCAAAGGTATG--ACTCT------------------------------------------------------AACCATATAAACAA-GTGGCATTTAACTT---AAAGCATTACACTTTTTAAACTTGTAGATCAAGGAGATTGCCACCAAGAAGAACAAGACTCCTGGACAGATCCTCAT	Size	Hit Count	Total Norm	Total
No Reads

droEug1

ACCGCCCATGGGCCAAGCCTGGTGACCCGGTTATCCTGGAGGAGGCTAAGGTAAGTGTTCTC------------------------------------------------------TTTTATGTTTATAAGGTTGTATTTATCTA---AATT-----TTTATTTTACACTTTCAGATCAAGGAGATTGCTGCCAAGAAGAAGAAGACTCCTGGACAGATTCTCAT	Size	Hit Count	Total Norm	Total
No Reads

dm3

ACCGCCCATGGGCCAAGGCTGGTGATCCGGTCATCCTAGAGGAGGCTAAGGTTGG--TTTGC------------------------------------------------------ATTGATAACAACAT-GTTGAATTTAACTT---TAAG-----CATTTTTAAAACTTTTAGATCAAGGAAATTGCCGCTAAGAAGAAGAAGACCCCTGGACAGATCCTTAT	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.......................GATCCGGTCATCCTAGAGGA......................................................................................................................................................................................	20	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................AAGAAGAAGACCCCTGGACAGA.......	22	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..CGCCCATGGGCCAAGGCTGGT..........................................................................................................................................................................................................	21	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................GAAGAAGACCCCTGGACAG........	19	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.....................................................................................................................................................................................................AGAAGAAGACCCCTGGACAG........	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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..............................................................................................................................................................................GATCAAGGAAATTGCCGCTAAG.............................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................TAAGAAGAAGAAGACCCCTGGA...........	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................GATCAAGGAAATTGCCGCTAAGA............................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........GGCCAAGGCTGGTGATCCGGTCATC..............................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................GAAATTGCCGCTAAGAAGAAGAA.....................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

ACCGCCCATGGGCCAAGGCTGGTGATCCGGTCATCCTAGAGGAGGCGAAGGTTGG--TTTGC------------------------------------------------------TTTTATAACAACAT-GTTGAATTTAACTT---TAAG-----CATTTTTAACACTATTAGATCAAGGAGATTGCCGCTAAGAAAAAGAAGACCCCTGGACAGATCCTCAT	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
........................................................................................................................................................................................................AGAAGACCCCTGGACAGATCCT...	22	1	4.00	4	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................GATCCGGTCATCCTAGAGGAGGCGAAG...............................................................................................................................................................................	27	1	3.00	3	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................AAGAAAAAGAAGACCCCTGGACAGATCCT...	29	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..CGCCCATGGGCCAAGGCTGGTGATC......................................................................................................................................................................................................	25	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................AAAAAGAAGACCCCTGGACAGATCC....	25	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
.................................................................................................................................................................................................AAGAAAAAGAAGACCCCTGGACAG........	24	1	2.00	2	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................AAAAGAAGACCCCTGGACAGATCCTC..	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........GGCCAAGGCTGGTGATCCGGT..................................................................................................................................................................................................	21	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................AAAAGAAGACCCCTGGACAG........	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................AGACCCCTGGACAGATCCT...	19	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................TAAGAAAAAGAAGACCCCTGGACAGAT......	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.......................................................................................................................................................................................................AAGAAGACCCCTGGACAGATCCT...	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................AGGAGATTGCCGCTAAGAAAAAG.......................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.................................................................................................................................................................................CAAGGAGATTGCCGCTAAGAAAAAGAA.....................	27	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................GATCAAGGAGATTGCCGCTAAG.............................	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................GAGATTGCCGCTAAGAAAAAGA......................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
........................................................................................................................................................................................................AGAAGACCCCTGGACAGA.......	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................AGAAGACCCCTGGACAGATCCTC..	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.................................................................................................................................................................................................AAGAAAAAGAAGACCCCTGGACAGATC.....	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................AAAAAGAAGACCCCTGGACAG........	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................TGCCGCTAAGAAAAAGAAGACCCCTGGA...........	28	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................AAGGAGATTGCCGCTAAGAA...........................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................GAAAAAGAAGACCCCTGGACA.........	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................AAGACCCCTGGACAGATCCT...	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................AAAAAGAAGACCCCTGGACAGATCCTC..	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................ACACTATTAGATCAAGGAG.........................................	19	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................AAGAAGACCCCTGGACAGATCCTC..	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................GATCAAGGAGATTGCCGCTAAGA............................	23	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................CAAGGAGATTGCCGCTAAGAAA..........................	22	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................GATTGCCGCTAAGAAAAAGA......................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.......................GATCCGGTCATCCTAGAGG.......................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
................................ATCCTAGAGGAGGCGAAG...............................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
...........GCCAAGGCTGGTGATCCGGT..................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................AAAAGAAGACCCCTGGACAGATCC....	24	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................AAAGAAGACCCCTGGACAGATCCT...	24	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.......ATGGGCCAAGGCTGGTGATCCGG...................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..CGCCCATGGGCCAAGGCTGGTGATCC.....................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................ATCCGGTCATCCTAGAGGAGG....................................................................................................................................................................................	21	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................CCGCTAAGAAAAAGAAGACC.................	20	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
.......................GATCCGGTCATCCTAGAGGAGGCGG.................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................CGCTAAGAAAAAGAAGACCCCT..............	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
......................TGATCCGGTCATCCTAGAGGAGGCGT.................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
...........................................................................................................................................................................................................AGACCCCTGGACAGATCCTC..	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSec2

ACCGCCCATGGGCCAAGGCTGGTGATCCGGTCATCCTAGAGGAGGCTAAGGTTCG--TTTGC------------------------------------------------------TTTTATA---ACAT-GTTGAATTTAACTT---TAAG-----CATTTTTAAAACTTTTAGATCAAGGAGATTGCCGCTAAGAAAAAGAGGACCCCTGGACAGATCCTCAT	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
.......................GATCCGGTCATCCTAGAGGAGGC...................................................................................................................................................................................	23	1	5.00	5	0	2	3	0
.................................................................................................................................................................................CAAGGAGATTGCCGCTAAGAAAAAGA......................	26	1	4.00	4	0	2	2	0
.......................................................................................................................................................................................GATTGCCGCTAAGAAAAAGAG.....................	21	1	3.00	3	0	0	3	0
.....................................................................................................................................................................................................AAAAGAGGACCCCTGGACA.........	19	1	3.00	3	0	0	3	0
..CGCCCATGGGCCAAGGCTGGT..........................................................................................................................................................................................................	21	1	3.00	3	0	0	3	0
................................................................................................................................................................................................TAAGAAAAAGAGGACCCCTGGACA.........	24	1	2.00	2	0	0	2	0
.CCGCCCATGGGCCAAGGCTGGT..........................................................................................................................................................................................................	22	1	2.00	2	0	0	2	0
...............................................................................................................................................................................ATCAAGGAGATTGCCGCTAAGA............................	22	1	2.00	2	0	1	1	0
...............................................................................................................................................................................ATCAAGGAGATTGCCGCTAAGAAAAAG.......................	27	1	2.00	2	0	0	2	0
........................................................................................................................................................................................ATTGCCGCTAAGAAAAAGAG.....................	20	1	2.00	2	0	1	1	0
...........................CGGTCATCCTAGAGGAGGC...................................................................................................................................................................................	19	1	1.00	1	0	0	1	0
..............................................................................................................................................................................................GCTAAGAAAAAGAGGACCC................	19	1	1.00	1	0	1	0	0
.................................................................................................................................................................................CAAGGAGATTGCCGCTAAGAA...........................	21	1	1.00	1	0	0	1	0
..............................................................................................................................................................................................GCTAAGAAAAAGAGGACCCCTG.............	22	1	1.00	1	0	1	0	0
........................ATCCGGTCATCCTAGAGGA......................................................................................................................................................................................	19	1	1.00	1	0	1	0	0
.......................................................................................................................................................................................GATTGCCGCTAAGAAAAAGAGG....................	22	1	1.00	1	0	1	0	0
..................................................................................................................................................................................AAGGAGATTGCCGCTAAGAAAAAGA......................	25	1	1.00	1	0	1	0	0
.....................GTGATCCGGTCATCCTAGAGGAGGC...................................................................................................................................................................................	25	1	1.00	1	0	0	1	0
.......................................................................................................................................................................................................AAGAGGACCCCTGGACAGATCCT...	23	1	1.00	1	0	1	0	0
............CCAAGGCTGGTGATCCGGTCATCG.............................................................................................................................................................................................	24	1	1.00	1	1	0	0	0
.....................................................................................................................................................................................................AAAAGAGGACCCCTGGACAG........	20	1	1.00	1	0	0	1	0
...........................................................................................................................................................................................GCCGCTAAGAAAAAGAGGACCCCTGGACA.........	29	1	1.00	1	0	1	0	0
..................................................................................................................................................................................................AGAAAAAGAGGACCCCTGGACA.........	22	1	1.00	1	0	0	1	0
...............................................................................................................................................................................ATCAAGGAGATTGCCGCTAAG.............................	21	1	1.00	1	0	1	0	0
.........................TCCGGTCATCCTAGAGGAG.....................................................................................................................................................................................	19	1	1.00	1	0	0	1	0
.................................................................................................................................................................................CAAGGAGATTGCCGCTAAGAAAA.........................	23	1	1.00	1	0	1	0	0
................................................................................................................................................................................TCAAGGAGATTGCCGCTAAGAAAA.........................	24	1	1.00	1	0	1	0	0
.........................TCCGGTCATCCTAGAGGAGGC...................................................................................................................................................................................	21	1	1.00	1	0	0	1	0
.......................GATCCGGTCATCCTAGAGGAG.....................................................................................................................................................................................	21	1	1.00	1	1	0	0	0
.......................GATCCGGTCATCCTAGAGGAGG....................................................................................................................................................................................	22	1	1.00	1	0	1	0	0
....................................................................................................................................................................................................AAAAAGAGGACCCCTGGAC..........	19	1	1.00	1	1	0	0	0
..............................................................................................................................................................................GATCAAGGAGATTGCCGCTAAG.............................	22	1	1.00	1	1	0	0	0
......................................................................................................................................................................................................AAAGAGGACCCCTGGACAGAT......	21	1	1.00	1	0	1	0	0
.......................GATCCGGTCATCCTAGAGGAGGCTAAGA..............................................................................................................................................................................	28	1	1.00	1	0	1	0	0
.........................TCCGGTCATCCTAGAGGAGGCTAAG...............................................................................................................................................................................	25	1	1.00	1	0	0	1	0
ACCGCCCATGGGCCAAGGCTGGT..........................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0
......................................................................................................................................................................................AGATTGCCGCTAAGAAAAAGAG.....................	22	1	1.00	1	0	1	0	0
......CATGGGCCAAGGCTGGTGA........................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0
.............................................................................................................................................................................AGATCAAGGAGATTGCCGCT................................	20	1	1.00	1	0	0	1	0
........................................................................................................................................................................................................AGAGGACCCCTGGACAGATC.....	20	1	1.00	1	0	0	1	0
........................ATCCGGTCATCCTAGAGGAGGCTAAG...............................................................................................................................................................................	26	1	1.00	1	0	0	1	0
..................................................................................................................................................................................AAGGAGATTGCCGCTAAGAAAA.........................	22	1	1.00	1	0	1	0	0
.....................................................................................................................................................................................GAGATTGCCGCTAAGAAAAAGAG.....................	23	1	1.00	1	0	0	1	0
..................................................................................................................................................................................AAGGAGATTGCCGCTAAGAA...........................	20	1	1.00	1	0	0	0	1
...................................................................................................................................................................................................GAAAAAGAGGACCCCTGGACA.........	21	1	1.00	1	0	0	1	0
.......................GATCCGGTCATCCTAGAG........................................................................................................................................................................................	18	1	1.00	1	0	0	1	0
.....................GTGATCCGGTCATCCTAGAGGAG.....................................................................................................................................................................................	23	1	1.00	1	0	1	0	0
...............................................................................................................................................................................ATCAAGGAGATTGCCGCT................................	18	1	1.00	1	0	0	1	0
.......................GATCCGGTCATCCTAGAGGAGGCT..................................................................................................................................................................................	24	1	1.00	1	0	0	1	0
........................ATCCGGTCATCCTAGAGGAGGC...................................................................................................................................................................................	22	1	1.00	1	0	0	1	0

droYak3

ACCGCCCATGGGCCAAGGCTGGTGATCCGGTCATCCTAGAGGAGGCTAAGGTTGG--TTCGC------------------------------------------------------TTTTATATAAACAT-GTTGAATTTCACTT---CAAG-----TATATTGAAAACATTTAGATCAAGGAGATTGCCGCTAAGAAGAAGAAGACCCCTGGACAGATCCTTAT	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
ACCGCCCATGGGCCAAGGCTGGT..........................................................................................................................................................................................................	23	1	26.00	26	0	1	0	0	0	0	0	0	0	0	25
......................................................................................................................................................................................................GAAGAAGACCCCTGGACAGATCCTT..	25	1	13.00	13	0	0	0	0	0	0	0	0	0	0	13
.................................................................................................................................................................................CAAGGAGATTGCCGCTAAGAAGAAGAA.....................	27	1	7.00	7	0	0	0	0	0	0	7	0	0	0	0
.......................................................................................................................................................................................GATTGCCGCTAAGAAGAAGAA.....................	21	1	5.00	5	0	0	0	0	0	0	5	0	0	0	0
.................................................................................................................................................................................CAAGGAGATTGCCGCTAAGA............................	20	1	3.00	3	0	0	0	0	0	0	3	0	0	0	0
.........GGGCCAAGGCTGGTGATCCGGT..................................................................................................................................................................................................	22	1	3.00	3	0	3	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................TCAAGGAGATTGCCGCTAAGA............................	21	1	3.00	3	0	0	0	0	0	0	3	0	0	0	0
..................................................................................................................................................................................AAGGAGATTGCCGCTAAGAAG..........................	21	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
.......................GATCCGGTCATCCTAGAGGAGGCTAAG...............................................................................................................................................................................	27	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
.................................................................................................................................................................................CAAGGAGATTGCCGCTAAGAA...........................	21	1	2.00	2	0	1	0	0	0	0	1	0	0	0	0
...............................................................................................................................................................................ATCAAGGAGATTGCCGCTAAGAAGAAGAA.....................	29	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
.................................................................................................................................................................................CAAGGAGATTGCCGCTAAGAAGAA........................	24	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
.......................................................................................................................................................................................GATTGCCGCTAAGAAGAAG.......................	19	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
.................................................................................................................................................................................CAAGGAGATTGCCGCTAAGAAGAAGA......................	26	1	2.00	2	0	1	0	0	0	0	1	0	0	0	0
.....................................................................................................................................................................................................AGAAGAAGACCCCTGGACAG........	20	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
.....................................................................................................................................................................................GAGATTGCCGCTAAGAAGAAGAA.....................	23	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
.......................................................................................................................................................................................GATTGCCGCTAAGAAGAAGA......................	20	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
...............................................................................................................................................................................ATCAAGGAGATTGCCGCTAAGAAGAAGA......................	28	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
...............................CATCCTAGAGGAGGCTAAGA..............................................................................................................................................................................	20	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
...............................................................................................................................................................................ATCAAGGAGATTGCCGCTAAGAAGA.........................	25	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
.....................................................................................................................................................................................................AGAAGAAGACCCCTGGACA.........	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..........GGCCAAGGCTGGTGATCCGGTCATCCT............................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................TAAGAAGAAGAAGACCCCTG.............	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................GGAGATTGCCGCTAAGAAGA.........................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.................................................................................................................................................................................................AAGAAGAAGAAGACCCCTGGACA.........	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...........GCCAAGGCTGGTGATCCGGC..................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.................................TCCTAGAGGAGGCTAAGGTTGG--TTCGC------------------------------------------------------T............................................................................................................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.......................................................................................................................................................................................GATTGCCGCTAAGAAGAAGAAG....................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...GCCCATGGGCCAAGGCTGGT..........................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.....................GTGATCCGGTCATCCTAGAGGAGGCT..................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...........GCCAAGGCTGGTGATCCGGT..................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................AGGAGATTGCCGCTAAGAAG..........................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.........................TCCGGTCATCCTAGAGGAGGC...................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.......................GATCCGGTCATCCTAGAGGAGG....................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
................................ATCCTAGAGGAGGCTAAG...............................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................TGCCGCTAAGAAGAAGAAGACCCCT..............	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................AGATCAAGGAGATTGCCGCT................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......ATGGGCCAAGGCTGGTGATCCGGT..................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........................TCCGGTCATCCTAGAGGAGGCTAAGA..............................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................TTGCCGCTAAGAAGAAGAA.....................	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.....................................................................................................................................................................................GAGATTGCCGCTAAGAAGAAGA......................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..........GGCCAAGGCTGGTGATCCGGTCC................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................AAGGAGATTGCCGCTAAGA............................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................AAGGAGATTGCCGCTAAGAAGAAGAAGA...................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.......................GATCCGGTCATCCTAGAGGA......................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................CTAAGAAGAAGAAGACCCCTGGACA.........	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...................................................................................................................................................................................AGGAGATTGCCGCTAAGAAGAAGAA.....................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...................................................................................................................................................................................................GAAGAAGAAGACCCCTGGACA.........	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......................GATCCGGTCATCCTAGAGGAG.....................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.....................GTGATCCGGTCATCCTAGAGGAGGC...................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........GGGCCAAGGCTGGTGATCCGGTC.................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................AAGAAGAAGACCCCTGGACAG........	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.................................................................................................................................................................................................AAGAAGAAGAAGACCCCTGGACAGATCC....	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...................................................................................................................................................................................................GAAGAAGAAGACCCCTGGA...........	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................AAGAAGACCCCTGGACAGATC.....	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
............................................................................................................................................................................................CCGCTAAGAAGAAGAAGACCCCT..............	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..................................................................................................................................................................................AAGGAGATTGCCGCTAAGAAGAAGAA.....................	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.......................GATCCGGTCATCCTAGAGGAGGCT..................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
................................................................................................................................................................................................TAAGAAGAAGAAGACCCCT..............	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................CAAGGAGATTGCCGCTAAGAAGAAG.......................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.........GGGCCAAGGCTGGTGATCCGGTCATCC.............................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................GACCCCTGGACAGATCCTT..	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................GAGATTGCCGCTAAGAAGAAGAAGA...................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..............................................................................................................................................................................GATCAAGGAGATTGCCGCTAAGAAG..........................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.........................................................................................................................................................................................TTGCCGCTAAGAAGAAGAAGACCCCT..............	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.....................................................................................................................................................................................................AGAAGAAGACCCCTGGACAGATA.....	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...............................................................................................................................................................................ATCAAGGAGATTGCCGCTAAGAAG..........................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................AGGAGATTGCCGCTAAGAAGA.........................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.................................................................................................................................................................................................AAGAAGAAGAAGACC.................	15	9	0.56	5	0	0	0	0	0	0	0	0	0	0	5

droEre2

ACCGCCCATGGGCCAAGGCTGGTGATCCGGTCATCCTAGAGGAGGCTAAGGTTGC--TTTGC-------------------------------------------------------TTTATATCAACAT-GTTGAACTTAACTT---CAAG-----TATATTTAAAACTTCTAGATCAAGGAGATTGCCGCTAAGAAGAACAAGACCCCTGGACAGATCCTTAT	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.................................................................................................................................................................................CAAGGAGATTGCCGCTAAGAA...........................	21	1	4.00	4	0	1	0	0	3	0	0
.......................................................................................................................................................................................GATTGCCGCTAAGAAGAACAA.....................	21	1	4.00	4	0	0	0	0	4	0	0
...............................................................................................................................................................................................CTAAGAAGAACAAGACCCCTGGA...........	23	1	4.00	4	0	0	0	1	2	1	0
.......................GATCCGGTCATCCTAGAGGAGGC...................................................................................................................................................................................	23	1	4.00	4	1	0	0	1	2	0	0
.................................................................................................................................................................................CAAGGAGATTGCCGCTAAGAAGAACAA.....................	27	1	3.00	3	0	0	0	0	3	0	0
.......................GATCCGGTCATCCTAGAGGAGGCTAAGA..............................................................................................................................................................................	28	1	3.00	3	0	0	0	0	3	0	0
.................................................................................................................................................................................CAAGGAGATTGCCGCTAAGA............................	20	1	2.00	2	0	0	0	0	1	1	0
.................................................................................................................................................................................................AAGAAGAACAAGACCCCTGGACAG........	24	1	2.00	2	0	0	0	0	1	1	0
........................ATCCGGTCATCCTAGAGGAGGCT..................................................................................................................................................................................	23	1	2.00	2	0	1	1	0	0	0	0
.......................GATCCGGTCATCCTAGAGGA......................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	2	0	0
.................................................................................................................................................................................CAAGGAGATTGCCGCTAAGAAG..........................	22	1	2.00	2	1	1	0	0	0	0	0
........................ATCCGGTCATCCTAGAGGAGGC...................................................................................................................................................................................	22	1	2.00	2	1	0	0	0	1	0	0
.......................................................................................................................................................................................GATTGCCGCTAAGAAGAACA......................	20	1	2.00	2	0	0	0	0	2	0	0
.............................................................................................................................................................................AGATCAAGGAGATTGCCGCT................................	20	1	2.00	2	0	0	0	0	2	0	0
.................................................................................................................................................................................................AAGAAGAACAAGACCCCTGGACA.........	23	1	2.00	2	0	0	0	0	2	0	0
.......................GATCCGGTCATCCTAGAGGAGGCT..................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	2	0	0
.......................GATCCGGTCATCCTAGAGGAGG....................................................................................................................................................................................	22	1	2.00	2	0	0	0	0	2	0	0
...............................................................................................................................................................................ATCAAGGAGATTGCCGCTAAGAA...........................	23	1	2.00	2	0	0	0	0	2	0	0
ACCGCCCATGGGCCAAGGCTGGT..........................................................................................................................................................................................................	23	1	2.00	2	1	0	0	0	0	1	0
.......................................................................................................................................................................................GATTGCCGCTAAGAAGAAC.......................	19	1	2.00	2	0	1	0	0	0	1	0
.......ATGGGCCAAGGCTGGTGAT.......................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0	0	0
..........................................................................................................................................................................................TGCCGCTAAGAAGAACAAGACCCCT..............	25	1	1.00	1	0	0	0	0	0	1	0
.........GGGCCAAGGCTGGTGATCCGGTC.................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0	0
......................................................................................................................................................................................AGATTGCCGCTAAGAAGAACAA.....................	22	1	1.00	1	0	0	1	0	0	0	0
...............................................................................................................................................................................ATCAAGGAGATTGCCGCTAAG.............................	21	1	1.00	1	0	0	0	0	1	0	0
...........GCCAAGGCTGGTGATCCGGTC.................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0
............................................................................................................................................................................................................GACCCCTGGACAGATCCT...	18	1	1.00	1	0	1	0	0	0	0	0
.................................................................................................................................................................................CAAGGAGATTGCCGCTAAGAAGA.........................	23	1	1.00	1	0	0	0	0	1	0	0
.................................................................................................................................................................................................AAGAAGAACAAGACCCCTGGAC..........	22	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................................................................................................ATCAAGGAGATTGCCGCTAAGA............................	22	1	1.00	1	1	0	0	0	0	0	0
...........................................................................................................................................................................................GCCGCTAAGAAGAACAAGACCCCTGGAC..........	28	1	1.00	1	0	0	0	0	1	0	0
................................ATCCTAGAGGAGGCTAAGA..............................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0
..................................................................................................................................................................................AAGGAGATTGCCGCTAAGAAGAACAAG....................	27	1	1.00	1	1	0	0	0	0	0	0
........................ATCCGGTCATCCTAGAGGAGGCTAA................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	1	0	0
........................................................................................................................................................................................................ACAAGACCCCTGGACAGAT......	19	1	1.00	1	0	1	0	0	0	0	0
..CGCCCATGGGCCAAGGCTGGT..........................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
........................................................................................................................................................................................ATTGCCGCTAAGAAGAACAAG....................	21	1	1.00	1	0	0	0	0	1	0	0
................................................................................................................................................................................................TAAGAAGAACAAGACCCCTGGACAG........	25	1	1.00	1	0	0	0	0	0	1	0
...........................CGGTCATCCTAGAGGAGG....................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	1	0
.................................................................................................................................................................................CAAGGAGATTGCCGCTAAGAAGAA........................	24	1	1.00	1	0	1	0	0	0	0	0
.....................GTGATCCGGTCATCCTAGAGGAGGC...................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0
...........GCCAAGGCTGGTGATCCGGTCATCCT............................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	1	0	0
..................................................................................................................................................................................AAGGAGATTGCCGCTAAGAAGAACAA.....................	26	1	1.00	1	0	0	0	0	1	0	0
...............................................................................................................................................................................ATCAAGGAGATTGCCGCTAAGAAG..........................	24	1	1.00	1	0	0	0	0	1	0	0
..............................................................................................................................................................................................GCTAAGAAGAACAAGACCCCT..............	21	1	1.00	1	0	0	0	0	0	1	0
..................................................................................................................................................................................................AGAAGAACAAGACCCCTGGACAG........	23	1	1.00	1	0	0	0	0	0	1	0
...............................................................................................................................................................................ATCAAGGAGATTGCCGCT................................	18	1	1.00	1	0	0	0	0	0	1	0
...................................................................................................................................................................................AGGAGATTGCCGCTAAGAAG..........................	20	1	1.00	1	0	0	0	0	1	0	0
.......................GATCCGGTCATCCTAGAGGAGGCTAAG...............................................................................................................................................................................	27	1	1.00	1	0	0	0	0	1	0	0
..................................................................................................................................................................................AAGGAGATTGCCGCTAAGA............................	19	1	1.00	1	0	0	0	0	1	0	0
................................................................................................................................................................................TCAAGGAGATTGCCGCTAAGA............................	21	1	1.00	1	0	0	0	0	1	0	0
...................................................................................................................................................................................AGGAGATTGCCGCTAAGAAGAACAA.....................	25	1	1.00	1	0	0	0	1	0	0	0
..................................................................................................................................................................................................AGAAGAACAAGACCCCTGGAC..........	21	1	1.00	1	0	0	0	0	0	1	0
...........................................................................................................................................................................................GCCGCTAAGAAGAACAAGA...................	19	1	1.00	1	0	0	0	0	1	0	0
................GGCTGGTGATCCGGTCATCCTAGAG........................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
..............................................................................................................................................................................................GCTAAGAAGAACAAGACCCCTGGACA.........	26	1	1.00	1	0	0	0	0	0	1	0
..........................................................................................................................................................................................................AAGACCCCTGGACAGATCC....	19	1	1.00	1	0	0	1	0	0	0	0
..............................................................................................................................................................................................GCTAAGAAGAACAAGACCCCTGGACAGAT......	29	1	1.00	1	0	0	0	0	1	0	0
..................................................................................................................................................................................AAGGAGATTGCCGCTAAGAAGAA........................	23	1	1.00	1	0	0	0	0	1	0	0
........................................................................................................................................................................................ATTGCCGCTAAGAAGAACAA.....................	20	1	1.00	1	0	0	0	0	1	0	0
...............................................................................................................................................................................................CTAAGAAGAACAAGACCCCTGGACA.........	25	1	1.00	1	0	0	0	0	1	0	0
.....................................................................................................................................................................................GAGATTGCCGCTAAGAAGAACAAG....................	24	1	1.00	1	0	0	0	0	1	0	0
................................................................................................................................................................................TCAAGGAGATTGCCGCTAAGAAGAACA......................	27	1	1.00	1	0	0	0	0	1	0	0
..CGCCCATGGGCCAAGGCTGGTGA........................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0	0
............................GGTCATCCTAGAGGAGGCT..................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1	0
...............................................................................................................................................................................ATCAAGGAGATTGCCGCTAAGAAGAACAA.....................	29	1	1.00	1	0	0	0	0	1	0	0
.....................GTGATCCGGTCATCCTAGAGGA......................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1	0

dpe_1120

scaffold_20:6513-6580 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads