ID:

dpe_1081

 Coordinate:

scaffold_2:5425077-5425227 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-34.1 -33.7 -33.6

Flybase annnotation

CDS [Dper\GL10630-cds]; exon [dper_GLEANR_10752:12]; intron [Dper\GL10630-in]

Repeatable elements

NameClassFamilyStrand
(CTG)nSimple_repeatSimple_repeat+
mature
  1. scaffold_10:2473552-2473571 -
  2. scaffold_25:911157-911176 +
  3. scaffold_25:911190-911209 +
  4. scaffold_47:151981-152000 -
  5. scaffold_1:2927911-2927930 -
  6. scaffold_1:8590378-8590397 -
  7. dpe_1081  scaffold_2:5425207-5425226 -
  8. scaffold_2:6120516-6120535 +
  9. scaffold_6:3679496-3679515 +
  10. scaffold_4:489652-489671 +
  11. scaffold_7:1844116-1844135 -
  12. dpe_2024  scaffold_7:2338157-2338176 +
  13. scaffold_14:1078495-1078514 -
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AGCATCGAGCGGGAGCGCCAGACGGAGCAGCAGCAACAGCAGCAGCCACAGCAGCAGCAGCAACAGTTGCAACAGCAGCAACAACCGTTTCAGCCATTCAACGATGAGAGGCAGCGCATCCGGTCGCAGCTGCTGGCCAAAATGAATCCCATGTAAGTAGAACAAATGCCGGATTAAACCAAATAAATGCCCAGCGAACTGGAAATGTCAATGTGGGGTCTATAGATGATTCAGTTGAATGGAGAAAATCT
**************************************************((.((((((((....)))))..(((((((....((((.....(((.((((....)))).)))........))))....))))))).........((((((((.............)))..)))))............)))...))......************************************************** 		Read size # Mismatch Hit Count Total Norm Total V042
embryo
 V057
head
 M042
female body
..................................................................................................................................................................................................................GTGGGGGGTCTATAGATGGTT.................... 21 3 1 1.00 1 1 0 0
.............................GCAGCAACAGCAGCAGCCAC.......................................................................................................................................................................................................... 20 0 10 0.10 1 0 0 1
...................................................CAGCAGCAGCAACAGTTGCA.................................................................................................................................................................................... 20 0 13 0.08 1 1 0 0
............................................................................................................................................................................................GCCCAGCGAACTGGTATGGT........................................... 20 3 14 0.07 1 0 1 0
...........................................................................................................................................................................................TGCCCGGAGAACTGGTAAT............................................. 19 3 15 0.07 1 0 1 0
.....................................AGCAGCAGCCAGTGCAGCAGCAGCA............................................................................................................................................................................................. 25 2 20 0.05 1 1 0 0

Anti-sense strand reads

TCGTAGCTCGCCCTCGCGGTCTGCCTCGTCGTCGTTGTCGTCGTCGGTGTCGTCGTCGTCGTTGTCAACGTTGTCGTCGTTGTTGGCAAAGTCGGTAAGTTGCTACTCTCCGTCGCGTAGGCCAGCGTCGACGACCGGTTTTACTTAGGGTACATTCATCTTGTTTACGGCCTAATTTGGTTTATTTACGGGTCGCTTGACCTTTACAGTTACACCCCAGATATCTACTAAGTCAACTTACCTCTTTTAGA
**************************************************((.((((((((....)))))..(((((((....((((.....(((.((((....)))).)))........))))....))))))).........((((((((.............)))..)))))............)))...))......************************************************** 		Read size # Mismatch Hit Count Total Norm Total V042
embryo
 V057
head
 M021
embryo
...............................................................................................................................................................................ATTGGATTATTTACGGGTC......................................................... 19 2 1 1.00 1 1 0 0
........CGCCCTCGCGGTCGGCCTCGCC............................................................................................................................................................................................................................. 22 2 2 0.50 1 0 1 0
....................................................................................................................................................................................................................CACCACAGATGTCTACTTA.................... 19 3 20 0.10 2 0 0 2
...........CCTCGCGGTCGGCCTCGCC............................................................................................................................................................................................................................. 19 2 14 0.07 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_2:5425027-5425277 - dpe_1081 AGCATCGAGCGGGA------------------------------GCGCCAGACGGAGCAGCAGCA------ACAG---------CAGCA------GCCACAGCAGCAGCAGCAACAGTTGCAACAGCAGCAACAACCGTTTCAGCCA--------------------------------------TTCAACGATGAGAGGCAG---CGCATCCGG-TCGCA------------GCTGCTGGCCAAAATGAATCCCATGTAAGTAGAACAAATG------------------C-------------------------------------------------------------------------------------------CGGATT------------------AA--ACCAAATAAATGC------------------CCAGCGAA-----CT----------GGAAATG---TCAATGTGGGGTC-------TATAGATGATTCAGTTGAATGGA-G---AAA-----ATCT
dp5 3:5217360-5217607 - AGCATCGAGCGGGA------------------------------GCGCCAGACGGAGCAGCAGCA------ACAG---------CAGCA------GCCACAGCAGCAGCAA---CAGTTGCAACAGCAGCAACAACCGTTTCAGCCA--------------------------------------TTCAACGACGAGAGGCAG---CGCATCCGG-TCGCA------------GCTGCTGGCCAAAATGAATCCCATGTAAGTAGAACAAATG------------------C-------------------------------------------------------------------------------------------CGGATT------------------AA--ACCAAATAAATGC------------------CCAGCGAA-----CT----------GGAAATG---TCAATGTGGGGTC-------TATAGAAGATTCAGTTGAATGGG-G---AAA-----ATCT
droWil2 scf2_1100000004954:3634040-3634260 + AGCATC----------------------------TTCAGCAACAACATCAGCAACAGCAGCAACA------ACAA---------CAACA------GCAACAGCAGCAGCAA---CAACAGCAGCAGCAGCAGCAACAGCAGCAGCAACAACAA-----------------------------------------CAGCAGCAA---CAGAAGCTA-------------------AA-------------------------------------------------------------------------GCAGTCACAA---CAGCAGCAGAATCAGTCGGGTCCGGGAAGTAATAAGG-------------------------------CCACCAATT--------TG--ACCAAGGATTCGCCCAAGCAAAAGCAAAACTCCAACGAA-----GA----------G---------------------------------------------------------------------
droVir3 scaffold_12963:15784966-15785172 + ACCATCAAACGTACGACAAATGCGCAGC------A---------GCAACAACAACAACAGCAGCA------GCAG------------CA------GCAACAACAACAACAG---CAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAACAG--------------------------------------------CAGCAGCAG---CAACAACAG-TC---------------GCCGCTGCCCACACCGAAAGCAACGCCCGCCGAACAAA-------------------------ATAAAATCAAAAT-------------------------------------------------------------------------------------------------------------CAAA-------------------------GCA-----CA----------GGCAACG---CC------------------------------------------------AACGTCAACG
droMoj3 scaffold_6473:14017497-14017702 - AGCAGC----------------------------AGCAGCAGCAACAACAACAGCAACAGCAACA------ACAG---------CAGCA------GCAACAGCAGCAACAA---CAACAGCAACAACAG---CAGCAGCAGCAGCAACAGCAGCAGCAGTTG-------------------------------------CCAC---CGCAAC-----AGCAGCAGCTGCCAC------------------AGCCGCCGCCAGTACCACAAAAG------------------CCGCA-------------ACAGCAACAA---CAACAACAA-------------------------------------------------------------------------------------------CA------------------ACAACCAG-----CA----------GGAGCTG---CCAATGTG----------------------------------------------------
droGri2 scaffold_15245:1507283-1507472 - AGCAGC----------------------------A---------GCAACAACAGCAGCAACAACA------GCAG------------CA------GCAACAGCAACAACAG---CAGCAGCAACAGCAGCAACAACAGCAGCAGCAACAACCACAGCAGATACACAACACATAAATATAATT----------------------------------------------------------------------------------------ATG------------------C-------------------------------------------------------------------------------------------CAAGTT-----------------------TCAAATAAATAT------------------GCAGC--------CT----------GCAAATT---TCAAG----CA---------TATTGAAA--TTAATTACCACAA-C---AAA-----GTCT
droAna3 scaffold_13340:22201002-22201220 + CACTGGGTGCAGC---------------------A---------GCAACAACAGCAGCAGCAACAGCAACAA------CAG---CAACA------ACAGCAACAACAGCAA---CAACAGCAACAGCAG---CCACAGCAGCAGCAGCAGCCGCAGCAGGTA----------------GCAAA-----------CAACG--AGCAACAAGCACAG-----------------------------------------------------------------------------------------------------------CAG---CAACAACC--------------------------ACCA-----------------------GTGACCCAGGTGTATG----------------------------------------GCATG-----CC----------GGAAGTG---TAAAAATTAAGACACCTATTTATATACGATTCAACCAAA---------------------
droBip1 scf7180000396385:8977-9122 + AGTATCGAACGGGA------------------------------GCGACAAACGGAGCAGCAGCA------GCAA---------CTGCA------ACAACAACAGCAACAGCA---------GCAGCAGCAGAAAAAGTT---GCAA--------------------------------------TTCGACGACGAGAAGCAG---CGCATTCGC-TCCCA------------GCTGTTGGCCAAAATGAATCCCATGTAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302470:1514722-1514882 + AGCATCGAGCGGGA------------------------------GCGGCAAACGGAGCAGCAACA------GTCG---------CAGCA------ACAGCAGCAACAGCA------------CCAGCAGCAGCAACAGTTGCAGCAAT-----------------------------------------ATGACGAGAGGCAG---CGCATTCGC-TCCCA------------GCTGTTGGCCAAAATGAATCCCATGTAAGTGCCATAAATG------------------T---------------------------------------------------------------------------------------------GACT------------------AA--A-----------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454078:918038-918280 + GGCAGTCGAGGGGAGTTGCTGTCAGAGGAACAATG---------GCAACCGTGGCAGCAGCAGCA------GCAG------------CA------GCAACAACAACAGCAA---CATCAG------------CAGCAGCAGCAGCAACATA-----------------------------------------AGCAGCGGCAA---CGCAAACGGGAGCCG------------CCTGTCGAGCCAATTAGGCTCCAAGGAGGC-----GACTGC-----------------T-------------------------------------------------------------------------------------------CGGCGT------------------AG--AT--AACAATTAA------------------CCAGCGAG-----C-------------AAATG---AAC-AGTCGTGGC-------ATCAAAAGAGGCAGCTACACGGCCT---AAA-----ATCC
droEle1 scf7180000491349:277271-277471 + AGCATCGAACGGGA------------------------------GCGACAAACGGAGCAGCAACA------GTTG---------CAGCA------GT-----------------------------------------------------------------------------------------TCGACGACGACAGGCAG---CGAATCCGG-TCCCA------------GCTGTTGGCCAAAATGAATCCCATGTAAGTGCTGCAAATGTGCCATAAACAGAAAAAA-----ATCAAATGAAAAT-------------------------------------------------------------------------------------------------------------GAAA---------------------------------AT----------GAAAATG---AAC----AGAGTG-------TTGTGGAAATGTAATTTAGCAAA-G---AGA-----AACT
droRho1 scf7180000779588:680706-680941 + G------AACAGC---------------------A---------GCAACAGAAACAGCAGCAACA------GCAGCAGCAACAGCAGCA------GCAAAACCAACAGCAG---CAACA---GCAACAGCAGCAACAGCA---ACAA--------------------------------------TTGAAATACCAGCAACAG---CAAA--------------------------------------------------------------------------------------------------------------------------ATTATTGGGG---CAGAATCAATAATCCCAAG-GATTAACAATTCAAACTCAAAATT------------------AGCCACCTAAT--ATGC------------------CAATCGAA-----CC--AGAAA--CC----CA---TCAATTCTATTTA-------AATATATCCCCCAGTCAAGCGGA-G---------------
droBia1 scf7180000301623:239627-239831 + AACAGC----------------------------AACAGCAGACGCACCAGCAGCAGCAGCAACACCACCAG------CAACAGCAGCA------GCAACTCACCCAGCAG---CAGCAACAGCTGCAGCAACATCTGCAGCAGCAGCAA---------------------CAGCAGCTGCAT-----------CAGCAG-----------------------------------------------------------------ATCAACCA------------------------------------GCAGATCCATCAGCAG---CAG---CA--------------------------GATG-----------------------GCCAACAAGCTGCTGATCAT--ACCCA-----AGC------------------CCATCGAA-----TC----------GATGATG---CC----------------------------------------------------------
droTak1 scf7180000415863:248661-248858 + G-C-------AAC---------------------A---------GCAACAAATGCAGCAGCAGCA------GCAGCAACAACAGCAGCA------GCAACAACAACAGTTG---CAAATGCAACAGCAGCAGCAGCAGATGATGCAGCAA----------------------------------------CAG-CAACAGCAA---CTGTTGCAA-CAGCA------------GCAGCAAGCC-------------------------------------------------------------------------------------------CA--------------------------GATG-----------------------GCCAA----------------------------------------------------CGAA-----GTCC---AATCCTCGGTTT---ACAGT----CG---------CATGGAGGAT----CTCAACGAA-C---AGG-----AAAT
droEug1 scf7180000405939:515-734 + AACAGC----------------------------GACTGCGGCAGCGACAACGGCGGCAGCGACA------ATAG---------CGGCA------GCGACAACGACAGCAG---CGGCGGCGACAACAG---CGGCAGCGACGACGGCGG------------------------CAG----------CAACGA-CGACGGCAG---CACCGGCGG-CGGCA------------GCGAC-GGCCACAACGAC---------------------------------------------------------------------------AACCAAACCATAT------GAAATGTGAGTAGG-------------------------------C----TTTT--------TG--TCTGAATTATCGCCAAATAAATAAAATAAATCCATCTAA-----CT----------G---------------------------------------------------------------------
dm3 chrX:7936512-7936704 - AGCAAC----------------------------A---------GCAGCAACATCAGCAGCAACACCACCAA------CAG---CAGCAGCAGCAGCAACTAACCCAGCAG---CAGCTGCAGCAGCAGCAACAACAACAGCAGCAGCAA---------------------CAACATCTCCAA-----------CAGCAGCAA---CACCAACAG-----------------------------------------------------------------------------------------------------------CAG---CACCATCA--------------------------GGCG-----------------------GCTAACAAGTTGCTGATCAT--ACCCA-----AAC------------------CCATCGAA-----TC----------GATGATG---CC----------------------------------------------------------
droSim2 3r:11833557-11833750 - G------AGCAGC---------------------A---------GCAGTAGTTGCAGCAGCAACA------GCAG---------CAGTA------GTTGCTGCAGCAGCAACAGCAGCAGCAGCAGCAGCAACAA--GCCGAAGCAA------------------AACAAACAACAATGGCAA-----------CAGCAG------------------------------------GAAGGCCAAAACAAAACCCAGCCA-GGAATACAAA-G------------------C-------------------------------------------------------------------------------------------CAAACA------------------AA--ACAAAACACAA-T------------------ACAATGG-CAACT------------GGCAATG---GC------------------------------------------------AATG-----T
droSec2 scaffold_44:20590-20776 - AGCAAC----------------------------A---------GCAGCAACACCAGCAGCAACACCACCAA------CAGCAGCAGCA------GCAACTAACCCAGCAG---CAGCTGCAGCAGCAGCAACAACAGCAGCAGCAACAA------------------------CATCTCCAA-----------CAGCAGCAA---CACCAACAG-----------------------------------------------------------------------------------------------------------CAG---CACCATCA--------------------------GGCG-----------------------GCTAACAAGTTGCTGATCAT--ACCCA-----AGC------------------CCATCGAA-----TC----------GATGATG---CC----------------------------------------------------------
droYak3 X:13749839-13750056 - GCCAGCGGA-GAGA------------------------------GCAACACCACCAGCAGCAACA------GCAG---------CAGCA------GCAACAGCAGCAACAG---CAACAGCAGCAGCAGCAGCA-CACCAGCGGTAACC----------------------------------------------------AC---TGCAG-CTG----CA---ACTGCGGCAGCCGCTTGGAATT--------------ACTAAAGTAATTA------------------A-------------------------------------------------------------------------------------------CAGAAT------------------TA--ACCGAAT------------------------TAATCGAA-----CT----------AAATATGAATTCAGTGCAATGTG-------TAGAGAGGA---------GCGGA-GATGGAAACG-CGTTT
droEre2 scaffold_4784:3527456-3527688 + GT--------GGGA------------------------------ATCCTGGCCAGAACAACAGCA------ACAA---------TAGCG------GCAACAACAGCGGCAACAGCAATAATAACAGCAGCAACAA---------------------------------------CGTGTCCTCCGTGCAAC------ATGTGG---CAAATGCCG-TCGCG---GCAGTGATCGCCAACGAGCATC---ACAACCATTTGAACAGCTTGAAAG------------------------------CGCGAT------------------------------------------------------------------------------TT------------------CA--GCCAGGC---AGCTCAGGTGAGGCGAAAA---------------GT----------CGAGG-------AAAATGGGGGA-------AATATGGGATATAGTTGAA--------------------T

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
AGCATCGAGCGGGA------------------------------GCGCCAGACGGAGCAGCAGCA------ACAG---------CAGCA------GCCACAGCAGCAGCAGCAACAGTTGCAACAGCAGCAACAACCGTTTCAGCCA--------------------------------------TTCAACGATGAGAGGCAG---CGCATCCGG-TCGCA------------GCTGCTGGCCAAAATGAATCCCATGTAAGTAGAACAAATG------------------C-------------------------------------------------------------------------------------------CGGATT------------------AA--ACCAAATAAATGC------------------CCAGCGAA-----CT----------GGAAATG---TCAATGTGGGGTC-------TATAGATGATTCAGTTGAATGGA-G---AAA-----ATCTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................GCAGCA------ACAG---------CAGCA------GCCAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................20100.101010000
......................................................................................................CAGCAGCAGCAACAGTTGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................20130.081001000
dp5
AGCATCGAGCGGGA------------------------------GCGCCAGACGGAGCAGCAGCA------ACAG---------CAGCA------GCCACAGCAGCAGCAA---CAGTTGCAACAGCAGCAACAACCGTTTCAGCCA--------------------------------------TTCAACGACGAGAGGCAG---CGCATCCGG-TCGCA------------GCTGCTGGCCAAAATGAATCCCATGTAAGTAGAACAAATG------------------C-------------------------------------------------------------------------------------------CGGATT------------------AA--ACCAAATAAATGC------------------CCAGCGAA-----CT----------GGAAATG---TCAATGTGGGGTC-------TATAGAAGATTCAGTTGAATGGG-G---AAA-----ATCTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................GCAGCAGCA------ACAG---------CAGCA------GCCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2270.1410100000000
..........................................................................G---------CAGCA------GCCACAGCAGCAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................21140.0710000100000
droWil2
AGCATC----------------------------TTCAGCAACAACATCAGCAACAGCAGCAACA------ACAA---------CAACA------GCAACAGCAGCAGCAA---CAACAGCAGCAGCAGCAGCAACAGCAGCAGCAACAACAA-----------------------------------------CAGCAGCAA---CAGAAGCTA-------------------AA-------------------------------------------------------------------------GCAGTCACAA---CAGCAGCAGAATCAGTCGGGTCCGGGAAGTAATAAGG-------------------------------CCACCAATT--------TG--ACCAAGGATTCGCCCAAGCAAAAGCAAAACTCCAACGAA-----GA----------G---------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................AGCAGCAA---CAGAAGCTA-------------------AA-------------------------------------------------------------------------GCAGT...............................................................................................................................................................................................................................2411.00100010
....................................................................................................................................................................................................................................................................................................................................GCAGCAGAATCAGTCGGGTCC................................................................................................................................................................................................2111.00100001
.........................................................................................................................................................................................................AA---CAGAAGCTA-------------------AA-------------------------------------------------------------------------GCAGTCACAA---C......................................................................................................................................................................................................................2411.00100010
...........................................................................................................................................................................................................................................................................................................................................AATCAGTCGGGTCCGGGAAG..........................................................................................................................................................................................2011.00100010
.........................................................................................................................................................................................................AA---CAGAAGCTA-------------------AA-------------------------------------------------------------------------GCAGTCACAA---CAGC...................................................................................................................................................................................................................2711.00100010
...............................................................................................................................................................................................................................................................................................................................................AGTCGGGTCCGGGAAGTAATAA....................................................................................................................................................................................2211.00100100
............................................................................................................................................................................................................................................................................................................................................................................................................ATT--------TG--ACCAAGGATTCGCCCA..............................................................................................................2111.00100100
......................................................................................................................................................................................................................A-------------------AA-------------------------------------------------------------------------GCAGTCACAA---CAGCAGCAGAATCA.........................................................................................................................................................................................................2711.00101000
......................................GCAACAACATCAGCAACAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2160.17100010
..................................................................................................ACAGCAGCAGCAA---CAACAGC................................................................................................................................................................................................................................................................................................................................................................................................................................20200.15300030
......................................................................................................................................ACAGCAGCAGCAACAACAA-----------------------------------------CAGC...................................................................................................................................................................................................................................................................................................................................................23200.15300030
..........................................................................................................AGCAA---CAACAGCAGCAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................21200.15300030
................................................................................................................................................CAACAACAA-----------------------------------------CAGCAGCAA---C..........................................................................................................................................................................................................................................................................................................................................19200.15300030
..............................................ATCAGCAACAGCAGCAACA------ACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2270.14100010
..............................................ATCAGCAACAGCAGCAACA------AC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.13100010
....................................................................................CAACA------GCAACAGCAGCAGCAA---CAACAGC................................................................................................................................................................................................................................................................................................................................................................................................................................2880.13100010
................................................................A------ACAA---------CAACA------GCAACAGCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................22200.10200110
.................................................AGCAACAGCAGCAACA------ACAA---------CA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.10200020
...................................................................................................CAGCAGCAGCAA---CAACAGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................23200.10201010
.....................................................ACAGCAGCAACA------ACAA---------CAACA------GCAACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................27130.08100010
..................................................................................................ACAGCAGCAGCAA---CAACAGCAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................27190.05100010
..........................................................................................................AGCAA---CAACAGCAGCAGCAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
......................................................................................ACA------GCAACAGCAGCAGCAA---CA.....................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
..........................................................................................................................GCAGCAGCAGCAACAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................20200.05100100
.....................................................................................AACA------GCAACAGCAGCAGCAA---CA.....................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
.................................................AGCAACAGCAGCAACA------ACAA---------C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
..........................................................................................................AGCAA---CAACAGCAGCAGCAGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100010
...............................................................CA------ACAA---------CAACA------GCAACAGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
............................................................CAACA------ACAA---------CAACA------GCAACAGCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100010
...................................................................................................................................GCAACAGCAGCAGCAACAACA.................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
.........................................................................................................CAGCAA---CAACAGCAGCAGCAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100010
...............................................................................................................................AGCAGCAACAGCAGCAGCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
...................................................CAACAGCAGCAACA------ACAA---------CAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100001
............................................................CAACA------ACAA---------CAACA------GCAACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100100
....................................................................................CAACA------GCAACAGCAGCAGCAA---C......................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100100
.......................................................................................CA------GCAACAGCAGCAGCAA---C......................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100010
........................................................................................................................................AGCAGCAGCAACAACAA-----------------------------------------CAGCAGCA...............................................................................................................................................................................................................................................................................................................................................25200.05100010
...........................................................................................................................CAGCAGCAGCAACAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................19200.05100010
..........................................................................................................................................CAGCAGCAACAACAA-----------------------------------------CAGCAG.................................................................................................................................................................................................................................................................................................................................................21200.05101000
...............................................................CA------ACAA---------CAACA------GCAACAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100001
.....................................................................................................................CAGCAGCAGCAGCAGCAACA................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100001
.......................................................................ACAA---------CAACA------GCAACAGCAGCAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100010
...........................................................................................................................................AGCAGCAACAACAA-----------------------------------------CAGCAGCAA---...........................................................................................................................................................................................................................................................................................................................................23200.05101000
...........................................AACATCAGCAACAGCAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100010
..............................................................ACA------ACAA---------CAACA------GCAACAGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100010
.........................................................................AA---------CAACA------GCAACAGCAGCAGCAA---CA.....................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
..................................................................................................ACAGCAGCAGCAA---CAACAGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100010
...........................................................................................................GCAA---CAACAGCAGCAGCAGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................23200.05110000
..................................................................................................ACAGCAGCAGCAA---CAACAGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
................................................................A------ACAA---------CAACA------GCAACAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100010
..............................................................................................................A---CAACAGCAGCAGCAGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100010
.................................................AGCAACAGCAGCAACA------ACAA---------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
droVir3
ACCATCAAACGTACGACAAATGCGCAGC------A---------GCAACAACAACAACAGCAGCA------GCAG------------CA------GCAACAACAACAACAG---CAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAACAG--------------------------------------------CAGCAGCAG---CAACAACAG-TC---------------GCCGCTGCCCACACCGAAAGCAACGCCCGCCGAACAAA-------------------------ATAAAATCAAAAT-------------------------------------------------------------------------------------------------------------CAAA-------------------------GCA-----CA----------GGCAACG---CC------------------------------------------------AACGTCAACGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................A-------------------------GCA-----CA----------GGCAACG---CC------------------------------------------------AACGTCAACG2512.002000000000000000000000000000000000200000000000000000000000000000
.........................................................................................................................AGCAGCAGCAGCAGCAACA.............................................................................................................................................................................................................................................................................................................................................................................................................19200.408008000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................GCAACAGCAGCAACAG--------------------------------------------CAGCA..................................................................................................................................................................................................................................................................................................................................................21200.102002000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................AACAGCAGCAACAG--------------------------------------------CAGCAGCAG---C..........................................................................................................................................................................................................................................................................................................................................24200.102002000000000000000000000000000000000000000000000000000000000000
................................................................A------GCAG------------CA------GCAACAACAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................19200.102000000000000000000000000000000000000200000000000000000000000000
..................................................ACAACAACAGCAGCA------GCAG------------CA------GCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.102001000000000000000000000000000000000010000000000000000000000000
...................................................CAACAACAGCAGCA------GCAG------------CA------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102000000000000010000000000000000000010000000000000000000000000000
......................................................................................................CAACAACAG---CAGCAGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................20200.102000000000000010000000000000000000010000000000000000000000000000
......................................................................................................................................GCAACAGCAGCAACAG--------------------------------------------CAGCAGCAG---CA.........................................................................................................................................................................................................................................................................................................................................27200.102001000000000000000000000000000000000010000000000000000000000000
................................................................................................................................................CAACAG--------------------------------------------CAGCAGCAG---CAAC.......................................................................................................................................................................................................................................................................................................................................19200.102000000000000000000010100000000000000000000000000000000000000000
.......................................................................................................AACAACAG---CAGCAGCAGCAGCAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................25200.102000000000000000000000020000000000000000000000000000000000000000
...................................................................................................................................................................................................AGCAGCAG---CAACAACAG-TC---------------................................................................................................................................................................................................................................................................................................................19140.071000000000000000000000000000000000000010000000000000000000000000
......................................................CAACAGCAGCA------GCAG------------CA------GCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000100000000000000000000000000000000
................................................................................................................................GCAGCAGCAACAGCAGCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000100000000000000000000000000000000000000000
........................................................................................................ACAACAG---CAGCAGCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................AGCAGCAACAGCAGCAACAG--------------------------------------------CAGCAGCA...............................................................................................................................................................................................................................................................................................................................................28200.051000000000000000001000000000000000000000000000000000000000000000
.......................................................................GCAG------------CA------GCAACAACAACAACAG---CA.....................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
..............................................AACAACAACAACAGCAGCA------GCAG------------C.................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................GCAGCAGCAGCAGCAGCAGCAA...............................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000010000000000000000000000000000000000
............................................GCAACAACAACAACAGCAGCA------GCAG------------CA------GC........................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.051000100000000000000000000000000000000000000000000000000000000000
..........................................................AGCAGCA------GCAG------------CA------GCAACAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................GCAGCAGCAACAGCAGCAACAG--------------------------------------------CAGCA..................................................................................................................................................................................................................................................................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
..................................................ACAACAACAGCAGCA------GCAG------------CA------GCAACAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000000000000000000000000000000000000000010
....................................................................................................AACAACAACAG---CAGCAGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000100000000000000000000000000000000000000000000000
.....................................................................................................................................AGCAACAGCAGCAACAG--------------------------------------------CAGCAGCAG---CA.........................................................................................................................................................................................................................................................................................................................................28200.051001000000000000000000000000000000000000000000000000000000000000
..........................................................................G------------CA------GCAACAACAACAACAG---CA.....................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................ACAG---CAGCAGCAGCAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000001000000000000000000000000000000000000
................................................................................................................................GCAGCAGCAACAGCAGCAACAG--------------------------------------------CAGCAG.................................................................................................................................................................................................................................................................................................................................................28200.051001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................GCAGCAGCAGCAGCAGCAACA.............................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................CAGCAGCAGCAGCAGCAGCAGCA................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000010000000000000000000000000000000000000
.........................................................................................................................AGCAGCAGCAGCAGCAACAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................GCAGCAGCAGCAGCAACAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000010000000000000000000000000000000000000
.......................................................AACAGCAGCA------GCAG------------CA------GCAACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................ACAGCAGCAACAG--------------------------------------------CAGCAGCAG---CAA........................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000010000000000000000000000000000000000000000000
............................................................................................................CAG---CAGCAGCAGCAGCAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000000000000100000000000000000000000000
....................................................AACAACAGCAGCA------GCAG------------CA------GCAACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000010000000000000000000000000000000000
................................................................................................CAACAACAACAACAG---CAGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000010000000000000000000000000000000000000000000
...........................................................................................................................................AGCAGCAACAG--------------------------------------------CAGCAGCAG---CAACAAC....................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000000000000000000000000000000000001
.........................................................................................................................................ACAGCAGCAACAG--------------------------------------------CAGCAGCAG---CAACA......................................................................................................................................................................................................................................................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................GCAACAG--------------------------------------------CAGCAGCAG---CAAC.......................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................AGCAACAG--------------------------------------------CAGCAGCAG---CAACAAC....................................................................................................................................................................................................................................................................................................................................24200.051000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................GCAGCAACAG--------------------------------------------CAGCAGCAG---CAAC.......................................................................................................................................................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................CAGCAACAGCAGCAACAG--------------------------------------------CAG....................................................................................................................................................................................................................................................................................................................................................21200.051000000000000001000000000000000000000000000000000000000000000000
...............................................................................................GCAACAACAACAACAG---CAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000100000000000000000000000000000000000000000000000000000000000
................................................................................................CAACAACAACAACAG---CAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................CAGCAACAG--------------------------------------------CAGCAGCAG---CAAC.......................................................................................................................................................................................................................................................................................................................................22200.051000000000000010000000000000000000000000000000000000000000000000
......................................................................................................................................GCAACAGCAGCAACAG--------------------------------------------CAGCAGCAG---C..........................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................GCAGCAGCAGCAGCAACAGCAGCAACA....................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................AGCAGCAACAGCAGCAACAG--------------------------------------------CAGC...................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000010000000000000000000000000000000000000000
........................................................................................................................................AACAGCAGCAACAG--------------------------------------------CAGCAGC................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000100000000000000000000000000000000000
............................................GCAACAACAACAACAGCAGCA------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000010000000000000000000000000000
.................................................AACAACAACAGCAGCA------GCAG------------CA------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000100000000000000000000000000000000000000000000000
........................................................................................................ACAACAG---CAGCAGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000000010000000000000000000000000000000
.......................................................................................CA------GCAACAACAACAACAG---CA.....................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000001000000000000000000000000000
........................................................................................................................................AACAGCAGCAACAG--------------------------------------------CAGCAGCA...............................................................................................................................................................................................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
................................................................................................CAACAACAACAACAG---CAGCAGCAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................29200.051000000000000000000000000000000000000010000000000000000000000000
..............................................................................................................................................AGCAACAG--------------------------------------------CAGCAGCAG---CAACAA.....................................................................................................................................................................................................................................................................................................................................23200.051000000000000001000000000000000000000000000000000000000000000000
..................................A---------GCAACAACAACAACAGCAGCA------GCAG------------C.................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................GCAGCAACAG--------------------------------------------CAGCAGCAG---...........................................................................................................................................................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
..............................................AACAACAACAACAGCAGCA------GCAG------------CA------GCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.051000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................AGCAGCAACAGCAGCAACAG--------------------------------------------CAGCA..................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000100000000000000000000000000000000000000000000
...............................................................CA------GCAG------------CA------GCAACAACAACAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000000000000000000000000000000000000001
....................................................................................................AACAACAACAG---CAGCAGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000010000000000000000000000000000000000000000000
...............................................................................................GCAACAACAACAACAG---CAGCAGCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................29200.051000100000000000000000000000000000000000000000000000000000000000
...................................................CAACAACAGCAGCA------GCAG------------CA------GCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................CAGCAGCAACAG--------------------------------------------CAGCAGCAG---C..........................................................................................................................................................................................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................GCAGCAGCAGCAACAGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................ACAACAGCAGCA------GCAG------------CA------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000000010000000000000000000000000000000
........................................................................................A------GCAACAACAACAACAG---CAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000010000000000000000000000000000000000000000000000
........................................................................................................................CAGCAGCAGCAGCAGCAACAG............................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000001000000000000000000000000000000000000
..............................................................GCA------GCAG------------CA------GCAACAACAACAACAG---CAG....................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051001000000000000000000000000000000000000000000000000000000000000
................................................CAACAACAACAGCAGCA------GC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000001000000000000000000000000000000000000000000000000
...............................................................CA------GCAG------------CA------GCAACAACAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000100000000000000000000000000000000000000
.............................................CAACAACAACAACAGCAGCA------GCAG------------CA------GCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.051000000000000000000000000000000000000010000000000000000000000000
...............................................................................................GCAACAACAACAACAG---CAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000001000000000000000000000000000000000
.......................................................................................CA------GCAACAACAACAACAG---CAG....................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................ACAG--------------------------------------------CAGCAGCAG---CAACAAC....................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000010000000000000000000000000000000000
.....................................................ACAACAGCAGCA------GCAG------------CA------GC........................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................AGCAGCAACAGCAGCAACAG--------------------------------------------CA.....................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000100000000000000000000000000000000000000000000000
..........................GC------A---------GCAACAACAACAACAGCAGCA------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
..................................A---------GCAACAACAACAACAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000001000000000000000000000000000000000000000000
................................................................................................................................GCAGCAGCAACAGCAGCAACA....................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000100000000000000000000000000000000000000
droMoj3
AGCAGC----------------------------AGCAGCAGCAACAACAACAGCAACAGCAACA------ACAG---------CAGCA------GCAACAGCAGCAACAA---CAACAGCAACAACAG---CAGCAGCAGCAGCAACAGCAGCAGCAGTTG-------------------------------------CCAC---CGCAAC-----AGCAGCAGCTGCCAC------------------AGCCGCCGCCAGTACCACAAAAG------------------CCGCA-------------ACAGCAACAA---CAACAACAA-------------------------------------------------------------------------------------------CA------------------ACAACCAG-----CA----------GGAGCTG---CCAATGTG----------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................................................................................................................................................................................................A-------------------------------------------------------------------------------------------CA------------------ACAACCAG-----CA----------GGAGC.................................................................1811.001000010
.............................................................................................................................ACAG---CAGCAGCAGCAGCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................20200.204000040
......................................................................................................................................GCAGCAGCAGCAACAGCAGCAGC............................................................................................................................................................................................................................................................................................................................................................................................23200.102200000
.....................................................................................AGCA------GCAACAGCAGCAACAA---CAACA..................................................................................................................................................................................................................................................................................................................................................................................................................................25200.102200000
.....................................AGCAGCAACAACAACAGCAACAGCAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051100000
........................................................................................A------GCAACAGCAGCAACAA---CAACAGC................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000010
.............................................................................................................................ACAG---CAGCAGCAGCAGCAACAGCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................27200.051100000
AGCAGC----------------------------AGCAGCAGCAACAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
................................................................................................CAACAGCAGCAACAA---CAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000010
...........................................AACAACAACAGCAACAGCAACA------ACAG---------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051100000
...AGC----------------------------AGCAGCAGCAACAACAACAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051100000
.........................................................CAGCAACA------ACAG---------CAGCA------GCAACAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000010
...................................................................................................................AACAGCAACAACAG---CAGCAG...............................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
....GC----------------------------AGCAGCAGCAACAACAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000010
..........................................................................G---------CAGCA------GCAACAGCAGCAACAA---C......................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000010
....................................................................................................................ACAGCAACAACAG---CAGCAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................23200.051000100
.............................................CAACAACAGCAACAGCAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051001000
.....................................................................................AGCA------GCAACAGCAGCAACAA---CAACAGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................28200.051100000
.......................................................................................................................GCAACAACAG---CAGCAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................18200.051100000
................................................................A------ACAG---------CAGCA------GCAACAGCAGCAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000010
.....................................AGCAGCAACAACAACAGCAACAGCAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000010
droGri2
AGCAGC----------------------------A---------GCAACAACAGCAGCAACAACA------GCAG------------CA------GCAACAGCAACAACAG---CAGCAGCAACAGCAGCAACAACAGCAGCAGCAACAACCACAGCAGATACACAACACATAAATATAATT----------------------------------------------------------------------------------------ATG------------------C-------------------------------------------------------------------------------------------CAAGTT-----------------------TCAAATAAATAT------------------GCAGC--------CT----------GCAAATT---TCAAG----CA---------TATTGAAA--TTAATTACCACAA-C---AAA-----GTCTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..................................................................................................................................AACAACAGCAGCAGCAACAACC.................................................................................................................................................................................................................................................................................................................................................................................................2270.14110
......................................................................................................................................ACAGCAGCAGCAACAACCACA..............................................................................................................................................................................................................................................................................................................................................................................................21130.08110
......................................................................................................................................ACAGCAGCAGCAACAACCA................................................................................................................................................................................................................................................................................................................................................................................................19170.06110
............................................................................................................................AGCAGCAACAACAGCAGCAGCAACA....................................................................................................................................................................................................................................................................................................................................................................................................25200.05110
droAna3
CACTGGGTGCAGC---------------------A---------GCAACAACAGCAGCAGCAACAGCAACAA------CAG---CAACA------ACAGCAACAACAGCAA---CAACAGCAACAGCAG---CCACAGCAGCAGCAGCAGCCGCAGCAGGTA----------------GCAAA-----------CAACG--AGCAACAAGCACAG-----------------------------------------------------------------------------------------------------------CAG---CAACAACC--------------------------ACCA-----------------------GTGACCCAGGTGTATG----------------------------------------GCATG-----CC----------GGAAGTG---TAAAAATTAAGACACCTATTTATATACGATTCAACCAAA---------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................................................................................................................................................................................................................................AG---CAACAACC--------------------------ACCA-----------------------GTGACCC.............................................................................................................................................2111.001010000
................................................CAACAGCAGCAGCAACAGCAACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.306030003
..............................................AACAACAGCAGCAGCAACAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.204040000
...............................................................................................................................AG---CCACAGCAGCAGCAGCAGC..................................................................................................................................................................................................................................................................................................................................................................................................21100.202110000
..................................................ACAGCAGCAGCAACAGCAACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.153000003
..............................................AACAACAGCAGCAGCAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.153010002
.............................................................................................................................GCAG---CCACAGCAGCAGCAGCA....................................................................................................................................................................................................................................................................................................................................................................................................2180.131100000
...................................................CAGCAGCAGCAACAGCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.102000002
..........................................................................................................AGCAA---CAACAGCAACAGCAG---C....................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000200
..............................................AACAACAGCAGCAGCAACAGCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102000002
..........AGC---------------------A---------GCAACAACAGCAGCAGCAACAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27140.071010000
..............................................AACAACAGCAGCAGCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
.............................................................................................................AA---CAACAGCAACAGCAG---C....................................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000
....................................................................................................................................CCACAGCAGCAGCAGCAGC..................................................................................................................................................................................................................................................................................................................................................................................................19200.051000001
.................................................AACAGCAGCAGCAACAGCAACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
.....................................................................................................................................CACAGCAGCAGCAGCAGC..................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000
...............................................ACAACAGCAGCAGCAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000
...................................................CAGCAGCAGCAACAGCAACAA------C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
.....................................................GCAGCAGCAACAGCAACAA------CAG---.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
..............................................AACAACAGCAGCAGCAACAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
....................................................AGCAGCAGCAACAGCAACAA------CAG---C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
.............................................CAACAACAGCAGCAGCAACAGCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051010000
..................................A---------GCAACAACAGCAGCAGCAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001
...........GC---------------------A---------GCAACAACAGCAGCAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
droBip1
AGTATCGAACGGGA------------------------------GCGACAAACGGAGCAGCAGCA------GCAA---------CTGCA------ACAACAACAGCAACAGCA---------GCAGCAGCAGAAAAAGTT---GCAA--------------------------------------TTCGACGACGAGAAGCAG---CGCATTCGC-TCCCA------------GCTGTTGGCCAAAATGAATCCCATGTAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
AGCATCGAGCGGGA------------------------------GCGGCAAACGGAGCAGCAACA------GTCG---------CAGCA------ACAGCAGCAACAGCA------------CCAGCAGCAGCAACAGTTGCAGCAAT-----------------------------------------ATGACGAGAGGCAG---CGCATTCGC-TCCCA------------GCTGTTGGCCAAAATGAATCCCATGTAAGTGCCATAAATG------------------T---------------------------------------------------------------------------------------------GACT------------------AA--A-----------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
GGCAGTCGAGGGGAGTTGCTGTCAGAGGAACAATG---------GCAACCGTGGCAGCAGCAGCA------GCAG------------CA------GCAACAACAACAGCAA---CATCAG------------CAGCAGCAGCAGCAACATA-----------------------------------------AGCAGCGGCAA---CGCAAACGGGAGCCG------------CCTGTCGAGCCAATTAGGCTCCAAGGAGGC-----GACTGC-----------------T-------------------------------------------------------------------------------------------CGGCGT------------------AG--AT--AACAATTAA------------------CCAGCGAG-----C-------------AAATG---AAC-AGTCGTGGC-------ATCAAAAGAGGCAGCTACACGGCCT---AAA-----ATCCSizeHit CountTotal NormTotal
No Reads
droEle1
AGCATCGAACGGGA------------------------------GCGACAAACGGAGCAGCAACA------GTTG---------CAGCA------GT-----------------------------------------------------------------------------------------TCGACGACGACAGGCAG---CGAATCCGG-TCCCA------------GCTGTTGGCCAAAATGAATCCCATGTAAGTGCTGCAAATGTGCCATAAACAGAAAAAA-----ATCAAATGAAAAT-------------------------------------------------------------------------------------------------------------GAAA---------------------------------AT----------GAAAATG---AAC----AGAGTG-------TTGTGGAAATGTAATTTAGCAAA-G---AGA-----AACTSizeHit CountTotal NormTotal
No Reads
droRho1
G------AACAGC---------------------A---------GCAACAGAAACAGCAGCAACA------GCAGCAGCAACAGCAGCA------GCAAAACCAACAGCAG---CAACA---GCAACAGCAGCAACAGCA---ACAA--------------------------------------TTGAAATACCAGCAACAG---CAAA--------------------------------------------------------------------------------------------------------------------------ATTATTGGGG---CAGAATCAATAATCCCAAG-GATTAACAATTCAAACTCAAAATT------------------AGCCACCTAAT--ATGC------------------CAATCGAA-----CC--AGAAA--CC----CA---TCAATTCTATTTA-------AATATATCCCCCAGTCAAGCGGA-G---------------SizeHit CountTotal NormTotal
No Reads
droBia1
AACAGC----------------------------AACAGCAGACGCACCAGCAGCAGCAGCAACACCACCAG------CAACAGCAGCA------GCAACTCACCCAGCAG---CAGCAACAGCTGCAGCAACATCTGCAGCAGCAGCAA---------------------CAGCAGCTGCAT-----------CAGCAG-----------------------------------------------------------------ATCAACCA------------------------------------GCAGATCCATCAGCAG---CAG---CA--------------------------GATG-----------------------GCCAACAAGCTGCTGATCAT--ACCCA-----AGC------------------CCATCGAA-----TC----------GATGATG---CC----------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
G-C-------AAC---------------------A---------GCAACAAATGCAGCAGCAGCA------GCAGCAACAACAGCAGCA------GCAACAACAACAGTTG---CAAATGCAACAGCAGCAGCAGCAGATGATGCAGCAA----------------------------------------CAG-CAACAGCAA---CTGTTGCAA-CAGCA------------GCAGCAAGCC-------------------------------------------------------------------------------------------CA--------------------------GATG-----------------------GCCAA----------------------------------------------------CGAA-----GTCC---AATCCTCGGTTT---ACAGT----CG---------CATGGAGGAT----CTCAACGAA-C---AGG-----AAATSizeHit CountTotal NormTotal
No Reads
droEug1
AACAGC----------------------------GACTGCGGCAGCGACAACGGCGGCAGCGACA------ATAG---------CGGCA------GCGACAACGACAGCAG---CGGCGGCGACAACAG---CGGCAGCGACGACGGCGG------------------------CAG----------CAACGA-CGACGGCAG---CACCGGCGG-CGGCA------------GCGAC-GGCCACAACGAC---------------------------------------------------------------------------AACCAAACCATAT------GAAATGTGAGTAGG-------------------------------C----TTTT--------TG--TCTGAATTATCGCCAAATAAATAAAATAAATCCATCTAA-----CT----------G---------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
AGCAAC----------------------------A---------GCAGCAACATCAGCAGCAACACCACCAA------CAG---CAGCAGCAGCAGCAACTAACCCAGCAG---CAGCTGCAGCAGCAGCAACAACAACAGCAGCAGCAA---------------------CAACATCTCCAA-----------CAGCAGCAA---CACCAACAG-----------------------------------------------------------------------------------------------------------CAG---CACCATCA--------------------------GGCG-----------------------GCTAACAAGTTGCTGATCAT--ACCCA-----AAC------------------CCATCGAA-----TC----------GATGATG---CC----------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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...............................................................CACCACCAA------CAG---CAGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................19180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................CCACCAA------CAG---CAGCAGCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................21190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
..CAAC----------------------------A---------GCAGCAACATCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................GCAGCAACAACAACAGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................AGCAACAACAACAGCAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................................................CCAA------CAG---CAGCAGCAGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................GCAGCAACAACAACAGCAGCAGCAA---------------------..............................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................CAGCAGCAACAACAACAGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................AACAACAGCAGCAGCAA---------------------CAA...........................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................................................................................................................AGCAACAACAACAGCAGCAGCAA---------------------C.............................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................................................ACCAA------CAG---CAGCAGCAGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................GCAGCAACAACAACAGCAGCAGCAA---------------------C.............................................................................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................CAGCAACAACAACAGCAGCAGCAA---------------------C.............................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................A------CAG---CAGCAGCAGCAGCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................GCAACAACAACAGCAGCAGCAA---------------------..............................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................A---------GCAGCAACATCAGCAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................ACCACCAA------CAG---CAGCAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
................................................................................................................................GCAACAACAACAGCAGCAGCAA---------------------CA............................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................AGCAACATCAGCAGCAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................AGCAG---CAGCTGCAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................CAGCAGCAGCAACAACAACAGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................ACAACAACAGCAGCAGCAA---------------------C.............................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
............................................................................................................................AGCAGCAACAACAACAGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................CACCAA------CAG---CAGCAGCAGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AGCAAC----------------------------A---------GCAGCAACATC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................ACAACAGCAGCAGCAA---------------------CAACA.........................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................AGCAGCAGCAACAACAACAG............................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................TGCAGCAGCAGCAACAACA................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
............................................................................................................................AGCAGCAACAACAACAGCAGCAGCAA---------------------CA............................................................................................................................................................................................................................................................................................................................................................................28200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................AGCAGCAACAACAACAGCAGCAGCA....................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
G------AGCAGC---------------------A---------GCAGTAGTTGCAGCAGCAACA------GCAG---------CAGTA------GTTGCTGCAGCAGCAACAGCAGCAGCAGCAGCAGCAACAA--GCCGAAGCAA------------------AACAAACAACAATGGCAA-----------CAGCAG------------------------------------GAAGGCCAAAACAAAACCCAGCCA-GGAATACAAA-G------------------C-------------------------------------------------------------------------------------------CAAACA------------------AA--ACAAAACACAA-T------------------ACAATGG-CAACT------------GGCAATG---GC------------------------------------------------AATG-----TSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................................................................................................................................................................................................................................................................CAAAACACAA-T------------------ACAATGG-.......................................................................................1811.00100001000000000000
....................................................................................................................................CAA--GCCGAAGCAA------------------AA..................................................................................................................................................................................................................................................................................................................................................................................1530.33100000000001000000
....................................................................................................................................CAA--GCCGAAGCAA------------------AACC................................................................................................................................................................................................................................................................................................................................................................................17110.09100000000001000000
.......................................................................................................AGCAGCAACAGCAGCAGCAGCAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100000000000100000
droSec2
AGCAAC----------------------------A---------GCAGCAACACCAGCAGCAACACCACCAA------CAGCAGCAGCA------GCAACTAACCCAGCAG---CAGCTGCAGCAGCAGCAACAACAGCAGCAGCAACAA------------------------CATCTCCAA-----------CAGCAGCAA---CACCAACAG-----------------------------------------------------------------------------------------------------------CAG---CACCATCA--------------------------GGCG-----------------------GCTAACAAGTTGCTGATCAT--ACCCA-----AGC------------------CCATCGAA-----TC----------GATGATG---CC----------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................................................................................................................................................................................CAA---CACCAACAG-----------------------------------------------------------------------------------------------------------CAG---CACCAT...........................................................................................................................................................................................................2111.0010010
..............................................................ACACCACCAA------CAGCAGCAGCA------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010010
...................................................................................................................................................................................................AGCAGCAA---CACCAACAG-----------------------------------------------------------------------------------------------------------CAG---C................................................................................................................................................................................................................21120.0810001
...................................................................................................................................................................................................AGCAGCAA---CACCAACAG-----------------------------------------------------------------------------------------------------------CA.....................................................................................................................................................................................................................19180.0610001
...............................................................CACCACCAA------CAGCAGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510010
.........................................................................................................................AGCAGCAGCAACAACAGCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................22200.0510010
droYak3
GCCAGCGGA-GAGA------------------------------GCAACACCACCAGCAGCAACA------GCAG---------CAGCA------GCAACAGCAGCAACAG---CAACAGCAGCAGCAGCAGCA-CACCAGCGGTAACC----------------------------------------------------AC---TGCAG-CTG----CA---ACTGCGGCAGCCGCTTGGAATT--------------ACTAAAGTAATTA------------------A-------------------------------------------------------------------------------------------CAGAAT------------------TA--ACCGAAT------------------------TAATCGAA-----CT----------AAATATGAATTCAGTGCAATGTG-------TAGAGAGGA---------GCGGA-GATGGAAACG-CGTTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................AGCAACAG---CAACAGCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................21200.10202000000000
........................................................................................................GCAACAG---CAACAGCAGCAGCAGCAGCA-..................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000000000
........................................................GCAGCAACA------GCAG---------CAGCA------GCAACAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000000000
..............................................................ACA------GCAG---------CAGCA------GCAACAGCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000000000
........................................................................................................GCAACAG---CAACAGCAGCAGCAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000000000
...........................................................................................................ACAG---CAACAGCAGCAGCAGCAGCA-..................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000000000
...............................................................CA------GCAG---------CAGCA------GCAACAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100100000000
droEre2
GT--------GGGA------------------------------ATCCTGGCCAGAACAACAGCA------ACAA---------TAGCG------GCAACAACAGCGGCAACAGCAATAATAACAGCAGCAACAA---------------------------------------CGTGTCCTCCGTGCAAC------ATGTGG---CAAATGCCG-TCGCG---GCAGTGATCGCCAACGAGCATC---ACAACCATTTGAACAGCTTGAAAG------------------------------CGCGAT------------------------------------------------------------------------------TT------------------CA--GCCAGGC---AGCTCAGGTGAGGCGAAAA---------------GT----------CGAGG-------AAAATGGGGGA-------AATATGGGATATAGTTGAA--------------------TSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................AGCA------ACAA---------TAGCG------GCAACAACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
........................................................................................................................................................................................................................................CGCCAACGAGCATC---ACAACCATTT......................................................................................................................................................................................................................................................................................2411.0011000000
..........................................................................................................................................................................................................................GCG---GCAGTGATCGCCAACGAGCATC---................................................................................................................................................................................................................................................................................................2511.0011000000
...........................................................................................................................................................................................CAAC------ATGTGG---CAAATGCCG-TC...............................................................................................................................................................................................................................................................................................................................2111.0010000010
.......................................................................................................................ATAACAGCAGCAACAA---------------------------------------CGTGTCCTCCG................................................................................................................................................................................................................................................................................................................................................................2711.0010000010
....................................................................................................................ATAATAACAGCAGCAACAA---------------------------------------CGT........................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
............................................................................................................................................................................................................................G---GCAGTGATCGCCAACGAGCAT....................................................................................................................................................................................................................................................................................................2211.0010000100
........................................................................................................................................................................................................................................CGCCAACGAGCATC---ACAACCATTTGAACA.................................................................................................................................................................................................................................................................................2911.0010000100
.........................................................................................................................................................................................................GG---CAAATGCCG-TCGCG---GCAGT....................................................................................................................................................................................................................................................................................................................2111.0011000000
.......................................................................................................................................................................................................................................................................AGCTTGAAAG------------------------------CGCGAT------------------------------------------------------------------------------TT------------------C.................................................................................................................................1911.0010000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................CAGGC---AGCTCAGGTGAGGCGTTT..................................................................................................2311.0011000000
.....................................................AGAACAACAGCA------ACAA---------TAGCG------GC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
......................................................................................................................AATAACAGCAGCAACAA---------------------------------------CGTGTCCTCC.................................................................................................................................................................................................................................................................................................................................................................2711.0010000010
......................................................GAACAACAGCA------ACAA---------TAGCG------GC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
.........................................................................AA---------TAGCG------GCAACAACAGCGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
...........................................................................................................................CAGCAGCAACAA---------------------------------------CGTGTC.....................................................................................................................................................................................................................................................................................................................................................................1811.0010000100
................................................................................................................................................................................................................................................................TTTGAACAGCTTGAAAG------------------------------CGCGA.....................................................................................................................................................................................................................................2211.0010000010
...................................................................................................................................................................................................................................................................GAACAGCTTGAAAG------------------------------CGCGAT------------------------------------------------------------------------------T.....................................................................................................................................................2111.0010000100
...................................................................................................................................................................................................................................................................GAACAGCTTGAAAG------------------------------CGCGAT------------------------------------------------------------------------------......................................................................................................................................................2011.0010000010
................................................................................................CAACAACAGCGGCAACAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000010
.................................................................................................AACAACAGCGGCAACAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................1930.3310000010

Generated: 06/08/2015 at 03:44 PM