ID:

dpe_1077

 Coordinate:

scaffold_2:5332049-5332288 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-46.3 -46.1 -46.1

Flybase annnotation

CDS [Dper\GL10640-cds]; exon [dper_GLEANR_10762:3]; exon [dper_GLEANR_10762:4]; CDS [Dper\GL10640-cds]; intron [Dper\GL10640-in]

No Repeatable elements found

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TCAGCAAATACGGCCCCATTGAGCGCATTCAAATGATTATCGATGCCCAGGTAAGTTCGGTTAAAGGTGCACACTCCCTAAGTTGCCAGACTCCACCACTAATGGCGGAACAGCTTTAAGTGTTTGCTGTCCTGTCCGGTTGGATGTCTGGCTAGATAAAAATAGGTAACAATTGTGAGTGCTTGCTATACAAACATAGCAAACCACTAAAGGCTTGTTTCCACATCTTCACACATTTCCATGTTTGTCTACATTGTTCTTCTTATTTTTCTAATCCCTCGCTTTCACAGACCCATCGCTCGCGTGGTTTCTGCTTTATTTATTTTCAAAATGTCGCCGA
*********************************************************************************...(((((((((((..(((...(((((.(((((...........))))).))))).))))))).)))))))............((.(((((((...((((.(((((((......)))))))..))))...)).))))).))......**************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V111
male body		 V042
embryo
 V050
head
 V057
head
.................................................................................GTTGCCAGACTCCACCACT................................................................................................................................................................................................................................................ 19 0 1 11.00 11 2 9 0 0 0 0
.................................................................................GTTGCCAGACTCCACCACTA............................................................................................................................................................................................................................................... 20 0 1 4.00 4 4 0 0 0 0 0
.............................................................................................................................................................................................................ACTAAAGGCTTGTTTCCACATCT................................................................................................................ 23 0 1 4.00 4 3 0 0 1 0 0
.................................................................................GTTGCCAGACTCCACCAC................................................................................................................................................................................................................................................. 18 0 1 4.00 4 3 1 0 0 0 0
.....................................................................................................................................GTCCGGTTGGATGTCTGGCTAG......................................................................................................................................................................................... 22 0 1 3.00 3 0 3 0 0 0 0
................................................................................................................GCTTTAAGTGTTTGCTGTCCT............................................................................................................................................................................................................... 21 0 1 2.00 2 0 0 1 1 0 0
............................................................................................................................................................TAAAAATAGGTAACAATTGTGAGTGCT............................................................................................................................................................. 27 0 1 2.00 2 0 1 1 0 0 0
....................................................................................................................................................................GGTAACAATTGTGAGTGCT............................................................................................................................................................. 19 0 1 2.00 2 0 0 2 0 0 0
..............................................................................................................................................................AAAATAGGTAACAATTGTGAGTGCT............................................................................................................................................................. 25 0 1 1.00 1 0 0 1 0 0 0
................................................................................................................................GTCCTGTCCGGTTGGATGTCTGGCTA.......................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................................................CTAAAGGCTTGTTTCCACATCT................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................................................AACAATTGTGAGTGCTTGC.......................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0
.....................................................................................................................AAGTGTTTGCTGTCCTGTCCGGTTGGAT................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0
............................................................................................................................................................................................................CACTAAAGGCTTGTTTCCACATCT................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0
............................................................................................................................................TGGATGTCTGGCTAGATAA..................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 1 0
...........................................................................................................................................................................................ATACAAACATAGCAAACCA...................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................................AGCTTTAAGTGTTTGCTGTCCT............................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 1 0 0
..........................................................................................................................................................................AATTGTGAGTGCTTGCTA........................................................................................................................................................ 18 0 1 1.00 1 0 0 0 1 0 0
..................................................................................................................................CCTGTCCGGTTGGATGTCT............................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
......................................................................................................................AGTGTTTGCTGTCCTGTCCGGTTGGATG.................................................................................................................................................................................................. 28 0 1 1.00 1 0 0 1 0 0 0
..........................................................................................................................TTTGCTGTCCTGTCCGGTTGGATG.................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 1 0 0 0
................................................................................................................................................................AATAGGTAACAATTGTGAGTGCTTGC.......................................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0
..................................................................................TTGCCAGACTCCACCACTAATGGCGGAAC..................................................................................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................GTTGGATGTCTGGCTAGATA...................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0
.........................................................................................ACTCCACCACTAATGGCGGAA...................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0
................................................................................................................GCTTTAAGTGTTTGTTGTC................................................................................................................................................................................................................. 19 1 1 1.00 1 0 1 0 0 0 0
..........................................................................................................................................................GATAAAAATAGTTAACAATTGTGAGTGCT............................................................................................................................................................. 29 1 1 1.00 1 0 0 1 0 0 0
...............................................................................................CCACTAATGGCGGAACAG................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0
...............................................................................................................................................................................................................TAAAGGCTTGTTTCCACATCT................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................TTGGATGTCTGGCTAGATAA..................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0
.............................................................................................CACCACTAATGGCGGAACA.................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................CTTTAAGTGTTTGCTGTC................................................................................................................................................................................................................. 18 0 1 1.00 1 0 1 0 0 0 0
.................................................................................GTTGCCAGACTCCACCACTGTA............................................................................................................................................................................................................................................. 22 3 1 1.00 1 1 0 0 0 0 0
................................................................................................................GCTTTAAGTGTTTGCTGTC................................................................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0
........................................................................................................................TGTTTGCTGTCCTGTCCGGTTGGATGT................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................GTCAGGTTGGGAGTCTGGCT........................................................................................................................................................................................... 20 3 8 0.13 1 0 0 0 0 0 1
................................................................................................................................GTGGTGTCCGGTCGGATGT................................................................................................................................................................................................. 19 3 19 0.05 1 0 0 1 0 0 0

Anti-sense strand reads

AGTCGTTTATGCCGGGGTAACTCGCGTAAGTTTACTAATAGCTACGGGTCCATTCAAGCCAATTTCCACGTGTGAGGGATTCAACGGTCTGAGGTGGTGATTACCGCCTTGTCGAAATTCACAAACGACAGGACAGGCCAACCTACAGACCGATCTATTTTTATCCATTGTTAACACTCACGAACGATATGTTTGTATCGTTTGGTGATTTCCGAACAAAGGTGTAGAAGTGTGTAAAGGTACAAACAGATGTAACAAGAAGAATAAAAAGATTAGGGAGCGAAAGTGTCTGGGTAGCGAGCGCACCAAAGACGAAATAAATAAAAGTTTTACAGCGGCT
****************************************************************************************************************...(((((((((((..(((...(((((.(((((...........))))).))))).))))))).)))))))............((.(((((((...((((.(((((((......)))))))..))))...)).))))).))......********************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V111
male body		 M042
female body
..........................................................................................................................................................................................................................AACGAGTAGAAGTGTGTAAAG..................................................................................................... 21 2 1 1.00 1 1 0
...........................................................................................AGGCGGTGATTACGGCTTTG..................................................................................................................................................................................................................................... 20 3 6 0.17 1 0 1
...........................................................................................AGGTGGTGATTCCGGCTTTG..................................................................................................................................................................................................................................... 20 3 15 0.07 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_2:5331999-5332338 - dpe_1077 TCAGCAAATACGGCCCCATTGAGCGCATTCAAATGATTATCGATGCCCAGGTAAGTTCGG-TTA--AAG---------G--TGCACACTCCCTA-A---------------GTTGCCAGACTCCACCACTAATGG---------------------CGGAACAGCTTTAAGTG-TTTGC-TGTCCT--GTCCGGTTGGATG--TCTGGCTAGATAAAAAT-----------AGGTAACAATTGTGAGTGCTT--GCTATACAAA--CATAGCAAACCACTAAAGGCTTGTTTCCACATCTTCACACATTTCCA---T---------------------------------------------GTTT-----------------------------------------------------GTCTACATTGTT----------CTTCTTA--TTTTTC----------------------------------------------------------------------------TAA--------------TCCCT-CGCTTTCACAGACCCATCGCTCGCGTGGTTTCTGCTTTATTTATTTTCAAAATGTCGCCGA
dp5 3:5131062-5131401 - dps_1026 TCAGCAAATACGGCCCCATTGAGCGCATTCAAATGATTATCGATGCCCAGGTAAGTTCGG-TTA--AAG---------G--TGCACACTCCCTA-A---------------GTTGCCAGACTCCACCACTAATGG---------------------CGGAACAGCTTTAAGTG-TTTGC-TGTCCT--GTCCGGTTGGATG--TCTGGCTAGATAAAAAT-----------AGGTAACAATTGTGAGTGCTT--GCTATACAAA--CATAGCAAACCACTAAAGGCTTGTTTCCACATCTTCACACATTTCCA---T---------------------------------------------GTTT-----------------------------------------------------GTCCACATTGTT----------CTTCTTA--TTTTTC----------------------------------------------------------------------------TAA--------------TCCCT-CGCTTTCACAGACCCATCGCTCGCGTGGTTTCTGCTTTATTTATTTTCAAAATGTCGCCGA
droWil2 scf2_1100000004514:1073638-1074005 - dwi_975 TTAACAAGTTTGGACCTATAGAACGAATCCAAATGGTTATTGATGCTCATGTGAGTATAT-CTA-AT-------T---GTT------------TAGCAA---------------------CTCCACTGTCTTTGG----CCAGTTTCATTCGCATCCCATTCAGC-CGGAGTATATAGT-TGTTTG--GACGAATTGTAGG--CTTGGCTAGAATATATCGTGTTATTCCGGGGCAGCAATAAAGAGTGTTT--GCTTATCAAGTTACTAGCAAATCACTAAAGGCTTGTTGTCACATTCCAATTCTTTTCTT---T---------------------------------------------TTTA---ATTT--------------AAAGTCTTTTTTCA---ACCTATA-CTAAG--------------------------------------------------TTAATTTGTT-----------------------------------------------------------------------CTTATTC-TCCATGACAGACTCATCGCTCCAGAGGTTTTTGCTTCATTTACTATGAGAATCTCAGTGA
droVir3 scaffold_12875:9998503-9998899 + dvi_5901 TTAATAAATTTGGACCCATCGAACGTATTCAAATGGTCATAGATGCTCATGTAAGTGCCA-TCGAATC----------AAT------------TTGCAA----------------------TCAACAGCCATCAGTTGATCAGT-----TCG----TATCTTGGACATAAGCT-TGTGCTAGTTGC--GTAC----TGACT--TTTGGCAATAGCATATT--------TAAATGCAGCAATAATGAGTGCCT--GCTATGCAAGTTACTAGCAACCCACTAAAGGCTTGCTGCAACATCTATATATTAGGAGG---AAAACCTAGATTATAAGTTAA--------------------------ATT-----------ATCAATAGCATAAATTACACTCGACGACTGC--AACGTACGACTCTGTAAGATG----------ACT------------------------------------------------------------------------------------GTGA---ATTATC-CAATAA-----T-AATTCTTGCAGACCCATCGCTCTCGGGGCTTTTGCTTCATATACTTTGAGAATCTCGGTGA
droMoj3 scaffold_6496:17025472-17025737 - TTAATAAATTTGGACCCATTCAACGTATTCAGATGGTTATCGATGCTCAAGTATGTTAAA-TTTTAAAGTTTC-----------A----ACTTA-T--------TTATCAAAATGCCATAATCTGTC--TGTGGG---------------------CAACTTGGAACTTAGCC-TCTTCCA--AGT--GCCA----TCTTT--CTTGGCTATATCATATA--------TAAGTACAACAATAATGAGTGTTT--GCTATGTGAGTTACTAGCAATTCACTAAAGGCTTGTTGTAACATCCATATTTTAGTTTT---A------A------------------------------------------TCGTTATT------------------------------------------------------GAT----------CTCTGTA---------------------------------------------------------------------------------------------------------------------------------------TT-------------------------------
droGri2 scaffold_15245:3186339-3186688 + TCAATAAATTCGGACCCATCGAACGCATCCAAATGGTCATCGATGCTCATGTAAGTGGGG-GGAT---------------------TCAACTTA-A--------TT-------GCCAAAATTGTGCCATTAATATTTGGTCAGC-----GTG----CAATTTGGACTTGAGCT-TCTGC-TGAGTT--GCGTGTCTGGCGT--TTTGGCAA-ACAGTATT--TCTATTTAAATGCAGCAATAATGAGTGTTT--GCTATGCGAATCACTAGCAATTCACTAAAGGCTTGCTGTAACATAAACATATATTTTGA---A---------------------------------------------TTC--------------------------------------------------------------------------------------------------------ACTCCATATTCTGTATT-----------------CACTA------------------------TTA--------------TTTAC-CATCCTTGTAGACTCATCGCTCTCGCGGCTTTTGCTTCATTTACTATGAGAATATCGGGGA
droAna3 scaffold_13266:14914290-14914610 + dan_2020 TCAACAAGTTCGGGCCGATAGAGCGCATTCAAATGGTCATTGATGCACATGTAAGTAAAC-TTTAAGTA----TTCT--------------------GA-ACTCTT--------GCCGCAACGGATCTAGAT-GG---------------------CTTAACAGCATAAAGCC--TTGC-TGTAAAGTCCTC----CGATT--TATGGCTAGATTATACC-----------TGTCAGCAATTATGTGTTTTT--GA-----CATTTCAAAGCCAAAAACTAAAGGCTTGCTGTCACACTCAAATAGTGC-------------------------------------------------------------------------------AAATTTTTCACGA---TTCAATAAGAACC-------------------------------------------------------------------------------------------------------------------TAT--------------CCTCG-TGGTCGAACAGACCCACCGCTCTCGAGGATTCTGCTTTATTTATTTCGAGAATCTCAGCGA
droBip1 scf7180000396385:82480-82798 + TCAGCAAGTTCGGGCCGATAGAACGCATTCAGATGGTCATTGATGCGCATGTAAGTGAAC-CTTTCCAGTA--TTC--------------------TCA-ACCTTT--------GCCA-AATGTATTTA-GAATG---------------------CTTAGCAGCACTAAGCC--TTGT-TGCAAAGCTCTC----CGATC--TCTGGCTAGATTATATC-----------TGAAAGCAATTATGAGTTTTT--GC-----ATTTTCGTAGTCAAAAACTAAAGGCTTGCTGTCACAATCACAGTA---------------------------------------------------------------------------------AAAATTGTACACGA---ATCAATA-GAACG-------------------------------------------------------------------------------------------------------------------T---------------TATCTTGTGGCCCAACAGACCCACCGCTCTCGAGGATTTTGCTTTATTTACTTCGAGAATCTCAGCGA
droKik1 scf7180000302470:1594298-1594523 + TCAACAAGTTTGGACCTATCGAGCGCATCCAGATGGTCATCGATGCTCACGTAAGTGGGG-GGTCACCAAGGGGGCTT---------------TA--TG-TATTGT--------GCCAGGATACATTTAAATGGG---------------------CCGAACTGCTTAGAGAC--TGGT-GGTTCC--GACC----AGAATTTACTGGCTATATTAAAGT-----------AGACAGCAATTATGAGCTCTT--GT-----GCATTCGAAACTAAGAGCTAAAGGCTTGCTTTCACAATTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453778:756912-757296 + TCAATAAGTATGGTCCCATTGAACGCATCCAGATGGTCATTGATGCACATGTAAGAGGCG-TTCA--AAAACATT--T---------------ATACTA-ACTCCC--------GCCTGAAGTAATTTTAGTCGA---------------------CAATTCGGC-TGAAGCC--TTGC-AGTTTT--GTCT----TTATT--TCCGGCTAAATAATAGA-----------AGATGGCGATTGTGAGCTTAT--GT-----GAATTCCAAACTATAAGCTAAAGGCTTGCTGTCACATTCCTATAGATTT-------------A------------------------------------------TCTTTAATAATGTCAATATTACAAATT-TACTCAACTGCTCAAAAATGCTTT-GCACATTTAGTT----------GCCTTCA--TTTAGA----------------------------------------------------------------------------TAAATCACCACATTTG-----T-ATTTTCAACAGACTCATCGTTCCCGAGGCTTCTGCTTCATTTACTTTGAGAATCTCGAGGA
droEle1 scf7180000491349:366308-366554 + TTAACAAGTACGGACCCATCGAGCGCATTCAGATGGTCATCGACGCACATGTAAGAGATG-TTTTCAAAATCAAAAAT---------------AACATA-CCTCCT--------GCCGGAATGCATTTGAGTATA---------------------CAAATCAGCTTGAAGCC--TTGC-AGTTCT--GTTC----TCATT--TCCGGCTAGATTATAGT-----------AGGCAGCGATTTTGAGCTTTT--GT-----GTATTCCAAACTATTAGCTAAAGGCTTGCTGTCACATCCACTTATACAC------ATTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGAGTTT-------------------------------
droRho1 scf7180000779318:324269-324498 - TTAACAAGTACGGACCCATCGAGCGAATCCAGATGGTCATCGACGCTCATGTAAGAAATT-TTCT--CAGTCATCGTA---------------AAGATA-CCTCCT--------GCCAGAATGCAGTTGAACATA---------------------CTAATCGGCTTGAAGTC--TTGC-AGTTTT--GTTC----TCGTT--TTCGGCTAGATTAAAGT-----------AGACAGCGATTGTGAGCTTTT--GT-----GTACTCCAAACTATAAGCTAAAGGCTTGCTGTCACATCCACGTATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000301754:2153169-2153521 + TCAACAAGTACGGACCCATCGAGCGCATCCAGATGGTCATCGACGCTCATGTAAGATTTGCTTTTGCCATACCCCCTT---------------AAGACA-ACTCGC--------GCCGGAACATCTACGAGTAGG---------------------CA-ATCAGCTTAAAGTC--TTGC-TGCTTT--GTCC----TCATT--TCTGGCTAGATTGAAGT-----------AGAGGGCGATTGTGAGCTTTT-CGT-----GTATTCCAAACTTAAAGCTAAAGGCTTGCCGTCACATTTGCATTACTACGTTTTAG---------------------------------------------GATT-----------------------------------------------------GCCAGCATAGTCCTATATTTTTACTACAACACTC-------------------------------------------------------------------------------TC-A----------TAAATCTTT-TGCCATACAGACACATCGTTCGCGGGGCTTCTGCTTCATTTACTTTGAGAATCTCGAGGA
droTak1 scf7180000415272:358393-358741 - TCAACAAGTACGGACCCATCGAGCGCATCCAAATGGTCATCGATGCACATGTAAGAGTGG-TTTTAAAGTTCCCTACT---------------GAGAGA-A---CT--------GCCCGATTAACTTTGAGT-GA---------------------GAAATCTGC-TGAAGCC--CTGC-AGATTT--TCCT----TCAAT--TCTGGCTAGACTATAGT-----------AGACGGCGATTGTGTGCTTTTGTGT-----GTAGTCCAAACTAAAAGCAAAAGGCTTGCTGTCACATTTGCATAATGTTTAT---A----CCAGTTTAATGGCTAA--------------------------TTT-----------------------------------------------------ATTTATATTCTT----------ACTAAAA--CTCTTT------------------------------------------------------------------------------------------GAAATCTCT-TCCCACACAGACACATCGTTCGCGGGGCTTCTGCTTCATTTACTTTGAGAATCTCGAGGA
droEug1 scf7180000409462:2346436-2346830 + TCAACAAGTACGGACCCATTGAACGTATCCAAATGGTCATCGACGCTCATGTAAGACTAG-TTCTAAAATTCAGTATT---------------ATAATA-ACTCTT--------GCCTGAATGCATTTGATTAGG---------------------CAACTCGGT-TGAAGTT--GTGC-AGTTTT--GTCA----TAATT--TCCGGCTAGATTACAAT-----------AGACAGTGATTATGAGCTTTT--GT-----GCATTCCAAACTAAAAGCTAAAGGCTTGCTGTCACACTGA-AAACTATTCAC---AACAAA-A------------------------------------------TG------------------------------------------------------------GTT----------TTT------------ATTTTCCAAAAT----ATATACACATTTATATAAAAAAAATGAAATTCCGAAACCAATTCATATTCTGCCCTGTACTG-ATTAA----------CTTAT-AAACATACAGACACATCGTTCGCGTGGCTTCTGCTTCATATACTTTGAGAATCTCGAGGA
dm3 chr2R:10490332-10490715 - TCAACAAGTACGGACCTATCGAACGCATCCAGATGGTGATTGACGCACAAGTAAGTCGGT-TTTCGATAAGCATTGCT---------------AAGATA-TTTCCT--------GCCTGAATCCTTTTGTGTAGA---------------------CAAATCCGC-TGAAGCC--CTGC-AGTTTT--GTCT----TAATT--TCTGGCTAGATAAAATT-----------TGATAGCGATTGTGAGTTTTT--GT-----GTATTCCAAACTAAAAGCTAAAGGCTTGCTGTCACAGTGGCATATTGTTCGA---AGGAAATA------------------------------------------TT------------------------------------------------------------GAT----------CTC-----------------CCGAAATCAATATGTGTTCAGTTGT-TAGGAAAGTTCAAGTTCACAAAC------------------GTAG---ATTAAC-CCTTAATAACTTC-TGACATACAGACACAGCGTTCCCGGGGCTTTTGTTTCATTTACTTTGAGAAACTCAGCGA
droSim2 2r:11192342-11192721 - dsi_2736 TCAACAAGTACGGACCCATCGAGCGCATCCAGATGGTGATTGACGCACAAGTAAGTCGGG-TTTCAATAAGCATTGCT---------------AAGATA-TTTCCT--------GCCTGAATCTTATTGTGTAGA---------------------CAAATCAGC-TGAAGCC--CTGC-AGTTTT--GTCT----TAATT--TCTGGCTAGATAAAATT-----------TGATAGCGATTGTGAGTTTTT--GT-----GTATTCCAAACTAAAAGCTAAAGGCTTGCTTTCACAGTGGCATATTGTTCGA---AGGACATA------------------------------------------TTGATATT------------------------------------------------------GAT----------C-------------------CCGAAATCAATATGTATTCAGTTGT-TAGGAAAAT--------ACAAAC------------------ATAG---ATTAAA-CCTTAATATCTTC-TGACATACAGACACAGCGTTCCCGGGGCTTTTGTTTCATTTACTTTGAGAAACTTAGCGA
droSec2 scaffold_1:8007298-8007677 - dse_685 TCAACAAGTACGGACCCATCGAGCGCATCCAGATGGTGATTGACGCACAAGTAAGTCGGT-TTTTAATAAGCATTGCT---------------AAGATT-TTTCCT--------GCCTGAATCGTATTGTGTAGA---------------------CAAATCAGC-TGAAGCC--CTGC-AGTTTT--GTCT----TAATT--TCTGGCTAGATAAAATT-----------TGATAGCGATTGTGAGTTTTT--GT-----GTATTCCAAACTAAAAGCTAAAGGCTTGCTTTCACAGTGGCATATTGTTCGA---AGGACATA------------------------------------------TTGATATT------------------------------------------------------TAT----------C-------------------CCGAAATCAATATGTATTCAGTTGT-TAGGAAAAT--------ACAAAC------------------ATAG---ATTAAA-CCTTAATATCTTC-TGACATACAGACACAGCGATCCCGGGGCTTTTGTTTCATTTACTTTGAGAAACTTAGCGA
droYak3 2R:10419071-10419415 - dya_530 TCAACAAGTACGGACCCATCGAACGCATCCAGATGGTTATAGACGCACATGTAAGTCGCT-TTATTAAAAGCATTGCT---------------AAGAGA-TTTCCT--------GCCTGAATCCTATTGTGTAGA---------------------CAAATCGGC-TGAAGCC--TTGC-AGTTTT--GTCT----AAAGT--TCTGGCTACATTGAATT-----------TGATAGCGATTGTGAGTTTTT--GT-----GTATTCCAAACTAAAAGCTAAAGGCTTGCTGTCACATTTGCACATTGTTTAT---AGGACATG------------------------------------------TG------------------------------------------------------------GTT----------CTT------------AAGGAAAAAACC----T--------------------------------------------------------TA------TAAA-CCTTTATATCTTT-TCACATACAGACACAGCGTTCCCGGGGCTTCTGTTTCATTTACTTTGAGAATCTCAACGA
droEre2 scaffold_4845:15363269-15363644 + der_1153 TCAACAAGTACGGACCCATCGAACGCATCCAGATGGTGATTGACGCACATGTAAGTCGGT-TTTTGATAAGCATTGCT---------------AAGGTATTTTCCT--------GCCTGAATCCCATTGTGTAGA---------------------CAAATCGGC-TGAAGCC--CTGC-AGTTTT--GTCT----CAATT--TCTGGCTAGATAGAATT--------T--AGACAGCGATTGTGAGTTTTT--GT-----GTATTCCAAACTAAAAGCTAAAGGCTTGCTGTCACAGTTGCATATTGTTTGA---AGAACATGTTTTACCAAAAAAAAAAAAAAAATTAAAATAAAATCAAGTT---------------------------------------------------------------GGT----------CT-------------------------------------------------------------------------------------GTAT---ATTAAA-CCTTTATATCTTC-TAACATACAGACTCAGCGTTCCCGGGGCTTCTGTTTCATTTACTTTGAGAATCTCAACGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
TCAGCAAATACGGCCCCATTGAGCGCATTCAAATGATTATCGATGCCCAGGTAAGTTCGG-TTA--AAG---------G--TGCACACTCCCTA-A---------------GTTGCCAGACTCCACCACTAATGG---------------------CGGAACAGCTTTAAGTG-TTTGC-TGTCCT--GTCCGGTTGGATG--TCTGGCTAGATAAAAAT-----------AGGTAACAATTGTGAGTGCTT--GCTATACAAA--CATAGCAAACCACTAAAGGCTTGTTTCCACATCTTCACACATTTCCA---T---------------------------------------------GTTT-----------------------------------------------------GTCTACATTGTT----------CTTCTTA--TTTTTC----------------------------------------------------------------------------TAA--------------TCCCT-CGCTTTCACAGACCCATCGCTCGCGTGGTTTCTGCTTTATTTATTTTCAAAATGTCGCCGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................................................GTTGCCAGACTCCACCACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19111.0011920000
...............................................................................................................GTTGCCAGACTCCACCACTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2014.004040000
.....................................................................................................................................................................................................................................................................................ACTAAAGGCTTGTTTCCACATCT............................................................................................................................................................................................................................................................................................................................2314.004031000
...............................................................................................................GTTGCCAGACTCCACCAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.004130000
............................................................................................................................................................................................GTCCGGTTGGATG--TCTGGCTAG....................................................................................................................................................................................................................................................................................................................................................................................................................2213.003300000
...................................................................................................................................................................GCTTTAAGTG-TTTGC-TGTCCT--............................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002001001
.....................................................................................................................................................................................................................TAAAAAT-----------AGGTAACAATTGTGAGTGCT.............................................................................................................................................................................................................................................................................................................................................................................2712.002100001
........................................................................................................................................................................................................................................GGTAACAATTGTGAGTGCT.............................................................................................................................................................................................................................................................................................................................................................................1912.002000002
.......................................................................................................................................................................................................................AAAAT-----------AGGTAACAATTGTGAGTGCT.............................................................................................................................................................................................................................................................................................................................................................................2511.001000001
.....................................................................................................................................................................................GTCCT--GTCCGGTTGGATG--TCTGGCTA.....................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
......................................................................................................................................................................................................................................................................................CTAAAGGCTTGTTTCCACATCT............................................................................................................................................................................................................................................................................................................................2211.001010000
...........................................................................................................................................................................................................................................AACAATTGTGAGTGCTT--GC........................................................................................................................................................................................................................................................................................................................................................................1911.001001000
........................................................................................................................................................................AAGTG-TTTGC-TGTCCT--GTCCGGTTGGAT................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000001
....................................................................................................................................................................................................................................................................................CACTAAAGGCTTGTTTCCACATCT............................................................................................................................................................................................................................................................................................................................2411.001010000
...................................................................................................................................................................................................TGGATG--TCTGGCTAGATAA................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000100
.................................................................................................................................................................................................................................................................ATACAAA--CATAGCAAACCA..................................................................................................................................................................................................................................................................................................................................................1911.001010000
..................................................................................................................................................................AGCTTTAAGTG-TTTGC-TGTCCT--............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000
..............................................................................................................................................................................................................................................AATTGTGAGTGCTT--GCTA......................................................................................................................................................................................................................................................................................................................................................................1811.001001000
.......................................................................................................................................................................................CCT--GTCCGGTTGGATG--TCT..........................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.........................................................................................................................................................................AGTG-TTTGC-TGTCCT--GTCCGGTTGGATG--.............................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000001
..............................................................................................................................................................................TTTGC-TGTCCT--GTCCGGTTGGATG--.............................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
.........................................................................................................................................................................................................................AAT-----------AGGTAACAATTGTGAGTGCTT--GC........................................................................................................................................................................................................................................................................................................................................................................2611.001001000
................................................................................................................TTGCCAGACTCCACCACTAATGG---------------------CGGAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001010000
.................................................................................................................................................................................................GTTGGATG--TCTGGCTAGATA.................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.......................................................................................................................ACTCCACCACTAATGG---------------------CGGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
.............................................................................................................................CCACTAATGG---------------------CGGAACAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.......................................................................................................................................................................................................................................................................................TAAAGGCTTGTTTCCACATCT............................................................................................................................................................................................................................................................................................................................2111.001010000
..................................................................................................................................................................................................TTGGATG--TCTGGCTAGATAA................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000100
...........................................................................................................................CACCACTAATGG---------------------CGGAACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
....................................................................................................................................................................CTTTAAGTG-TTTGC-TGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
...............................................................................................................GTTGCCAGACTCCACCACTGTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
...................................................................................................................................................................GCTTTAAGTG-TTTGC-TGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...........................................................................................................................................................................TG-TTTGC-TGTCCT--GTCCGGTTGGATG--T............................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
dp5
TCAGCAAATACGGCCCCATTGAGCGCATTCAAATGATTATCGATGCCCAGGTAAGTTCGG-TTA--AAG---------G--TGCACACTCCCTA-A---------------GTTGCCAGACTCCACCACTAATGG---------------------CGGAACAGCTTTAAGTG-TTTGC-TGTCCT--GTCCGGTTGGATG--TCTGGCTAGATAAAAAT-----------AGGTAACAATTGTGAGTGCTT--GCTATACAAA--CATAGCAAACCACTAAAGGCTTGTTTCCACATCTTCACACATTTCCA---T---------------------------------------------GTTT-----------------------------------------------------GTCCACATTGTT----------CTTCTTA--TTTTTC----------------------------------------------------------------------------TAA--------------TCCCT-CGCTTTCACAGACCCATCGCTCGCGTGGTTTCTGCTTTATTTATTTTCAAAATGTCGCCGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................GTTGCCAGACTCCACCAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1818.0080512000000
.....................................................................................................................................................................................................................................................................................ACTAAAGGCTTGTTTCCACATCT............................................................................................................................................................................................................................................................................................................................2316.0060600000000
...............................................................................................................GTTGCCAGACTCCACCACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1915.0050401000000
...............................................................................................................GTTGCCAGACTCCACCACTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2015.0050500000000
....................................................................................................................................................................................................................................................................................CACTAAAGGCTTGTTTCCACATCT............................................................................................................................................................................................................................................................................................................................2415.0050200201000
................................................................................................................TTGCCAGACTCCACCACTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030200010000
.......................................................................................................................................................................................CCT--GTCCGGTTGGATG--TCTGGCTA.....................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030300000000
......................................................................................................................................................................................................................................................................................CTAAAGGCTTGTTTCCACATCT............................................................................................................................................................................................................................................................................................................................2213.0030201000000
..........................................................................................................................................................................GTG-TTTGC-TGTCCT--GTCCGGTTGGATG--.............................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020200000000
................................................................................................................................................................................................................................................................................AAACCACTAAAGGCTTGTTTCCACATCT............................................................................................................................................................................................................................................................................................................................2812.0020200000000
..........................................................................................................................................................................................................................AT-----------AGGTAACAATTGTGAGTGCTT--GCT.......................................................................................................................................................................................................................................................................................................................................................................2612.0020010100000
.......................................................................................................................................................................................................................................................................................TAAAGGCTTGTTTCCACATCT............................................................................................................................................................................................................................................................................................................................2112.0020110000000
.....................................................................................................................................................................................................................................................................................ACTAAAGGCTTGTTTCCACATCTT...........................................................................................................................................................................................................................................................................................................................2412.0020110000000
................................................................................................................TTGCCAGACTCCACCACTAATGG---------------------CGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020010001000
................................................................................................................................................................................................................................................................................AAACCACTAAAGGCTTGTTTCCACATCTT...........................................................................................................................................................................................................................................................................................................................2912.0020110000000
.................................................................................................................................................................................................................................................................ATACAAA--CATAGCAAACCACTAAAGGCTT........................................................................................................................................................................................................................................................................................................................................2912.0020110000000
....................................................................................................................................................................................................................................................................................CACTAAAGGCTTGTTTCCACATCC............................................................................................................................................................................................................................................................................................................................2412.0020020000000
................................................................................................................TTGCCAGACTCCACCACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
......................................................................................................................................................................................................................................................................................CTAAAGGCTTGTTTCCACATCTT...........................................................................................................................................................................................................................................................................................................................2311.0010100000000
........................................................................................................................................................................................CT--GTCCGGTTGGATG--TCTGG........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...............................................................................................A---------------GTTGCCAGACTCCACCACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
................................................................................................................TTGCCAGACTCCACCACTAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTATTTATTTTCAAAATGTCGCC..2611.0010010000000
...............................................................................................................GTTGCCAGACTCCACCACTAATGG---------------------CGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
................................................................................................................TTGCCAGACTCCACCACTAATGG---------------------CGGAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100000000
..................................................................................................................................................................................................................................................................................ACCACTAAAGGCTTGTTTCCACATCT............................................................................................................................................................................................................................................................................................................................2611.0010100000000
.......................................................................................................................................................................................................................................................................................TAAAGGCTTGTTTCCACATC.............................................................................................................................................................................................................................................................................................................................2011.0010010000000
.....................................................................................................................................................................................................................................................................................ACTAAAGGCTTGTTTCCACATCTC...........................................................................................................................................................................................................................................................................................................................2411.0010100000000
.........................................................................................................................................................................................................................................................................................AAGGCTTGTTTCCACATCT............................................................................................................................................................................................................................................................................................................................1911.0010100000000
................................................................................................................................................................................................................................................................................AAACCACTAAAGGCTTGTTTCCACATC.............................................................................................................................................................................................................................................................................................................................2711.0010100000000
...............................................................................................................GTTGCCAGACTCCACCACTAATGG---------------------CGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
.........................................................................................................................................................................................................................AAT-----------AGGTAACAATTGTGAGTGCT.............................................................................................................................................................................................................................................................................................................................................................................2311.0010000001000
....................................................................................................................................................................................................................................................................................CACTAAAGGCTTGTTTCCACAT..............................................................................................................................................................................................................................................................................................................................2211.0010100000000
.........................................................................................................................................................................................................................................GTAACAATTGTGAGTGCTT--GC........................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
..............................................................................................................................................................................................CCGGTTGGATG--TCTGGCTA.....................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................C----------------------------------------------------------------------------TAA--------------TCCCT-CGCTTTCACAG..................................................2011.0010100000000
..........................................................................................................................................................................................................................AT-----------AGGTAACAATTGTGAGTGCT.............................................................................................................................................................................................................................................................................................................................................................................2211.0010000001000
.................................................................................................................................................................................................................................................................ATACAAA--CATAGCAAACCA..................................................................................................................................................................................................................................................................................................................................................1911.0010010000000
..................................................................................................................................................................................................................................................................................ACCACTAAAGGCTTGTTTCCACAT..............................................................................................................................................................................................................................................................................................................................2411.0010100000000
.....................................................................................................................................................................................................................TAAAAAT-----------AGGTAACAATTGTGAG.................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
............................................................................................................................................................................................................CTGGCTAGATAAAAAT-----------AGGTAACAATTGC....................................................................................................................................................................................................................................................................................................................................................................................2911.0010010000000
........................................................................................................................................................................................................................................................................................AAAGGCTTGTTTCCACATCT............................................................................................................................................................................................................................................................................................................................2011.0010100000000
...................................................................................................................................................................GCTTTAAGTG-TTTGC-TGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
...............................................................................................................GTTGCCAGACTCCACCAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
.........................................................................................................................................................................AGTG-TTTGC-TGTCCT--GTCCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
....................................................................................................................................................................................................................................................................................CACTAAAGGCTTGTTTCCACATCTT...........................................................................................................................................................................................................................................................................................................................2511.0010000100000
............................................................................................................................................................................................................CTGGCTAGATAAAAAT-----------AGGTAACAATT......................................................................................................................................................................................................................................................................................................................................................................................2711.0010010000000
..............................................................................................................................................................................................................GGCTAGATAAAAAT-----------AGGTAACAATTGT....................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
..............................................................................G--TGCACACTCCCTA-A---------------GTTGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
droWil2
TTAACAAGTTTGGACCTATAGAACGAATCCAAATGGTTATTGATGCTCATGTGAGTATAT-CTA-AT-------T---GTT------------TAGCAA---------------------CTCCACTGTCTTTGG----CCAGTTTCATTCGCATCCCATTCAGC-CGGAGTATATAGT-TGTTTG--GACGAATTGTAGG--CTTGGCTAGAATATATCGTGTTATTCCGGGGCAGCAATAAAGAGTGTTT--GCTTATCAAGTTACTAGCAAATCACTAAAGGCTTGTTGTCACATTCCAATTCTTTTCTT---T---------------------------------------------TTTA---ATTT--------------AAAGTCTTTTTTCA---ACCTATA-CTAAG--------------------------------------------------TTAATTTGTT-----------------------------------------------------------------------CTTATTC-TCCATGACAGACTCATCGCTCCAGAGGTTTTTGCTTCATTTACTATGAGAATCTCAGTGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................................................................................................................................................................................................CTAAAGGCTTGTTGTCACATTC............................................................................................................................................................................................................................................................................................................................22117.0017111014
.......................................................................................................................................................................................................................................................................................TAAAGGCTTGTTGTCACATTC............................................................................................................................................................................................................................................................................................................................21113.0013200011
........................................................................................................................................................................................................................................................................................AAAGGCTTGTTGTCACATTC............................................................................................................................................................................................................................................................................................................................20112.0012002010
.........................................................................................................................................................................................................................................................................................AAGGCTTGTTGTCACATTC............................................................................................................................................................................................................................................................................................................................1917.00700016
....................................................................................................................................................................................................................................................................................CACTAAAGGCTTGTTGTCACATTC............................................................................................................................................................................................................................................................................................................................2415.00500005
..................................................................................................................................................................................................................................................................................ATCACTAAAGGCTTGTTGTCACATTC............................................................................................................................................................................................................................................................................................................................2614.00402002
...................................................................................................................................................................................................................................................................................TCACTAAAGGCTTGTTGTCACATTC............................................................................................................................................................................................................................................................................................................................2514.00400004
..............................................................................................................................................................................................................................GTTATTCCGGGGCAGCAATAA.....................................................................................................................................................................................................................................................................................................................................................................................2114.00401030
....................................................................................................................................................................................................................................................................................CACTAAAGGCTTGTTGTCACATTCC...........................................................................................................................................................................................................................................................................................................................2513.00300111
.........................................................................................................................................................................................................................................................................................AAGGCTTGTTGTCACATTCC...........................................................................................................................................................................................................................................................................................................................2013.00302100
.......................................................................................................................................................................................................................................................................................TAAAGGCTTGTTGTCACATTCC...........................................................................................................................................................................................................................................................................................................................2213.00300012
..........................................................................................................................................................................................................................................................................................AGGCTTGTTGTCACATTCC...........................................................................................................................................................................................................................................................................................................................1913.00300003
.....................................................................................................................................................................................................................................................................................ACTAAAGGCTTGTTGTCACATTC............................................................................................................................................................................................................................................................................................................................2313.00300003
.........................................................................................................................................................................................................................ATCGTGTTATTCCGGGGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................2212.00200200
..........................................................................................................................................................................................................................................................................................AGGCTTGTTGTCACATTC............................................................................................................................................................................................................................................................................................................................1812.00200002
...................................................................................................................................TTGG----CCAGTTTCATTCGCATCCCATTCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00202000
................................................................................................................................................................................................................................................................................AAATCACTAAAGGCTTGTTGTCACATTCC...........................................................................................................................................................................................................................................................................................................................2912.00202000
.......................................................................................................................................................................................TTG--GACGAATTGTAGG--CTTG.........................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
.....................................................................................................................................................................................GTTTG--GACGAATTGTAGG--CTTGG........................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
...................................................................................................................................TTGG----CCAGTTTCATTCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
..................................................................................................................................................................................................................................................................................ATCACTAAAGGCTTGTTGTCACATTCC...........................................................................................................................................................................................................................................................................................................................2711.00100010
.........TTGGACCTATAGAACGAATCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
...................................................................................................................................TTGG----CCAGTTTCATTCGCATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001
......................................................................................................................................................................CGGAGTATATAGT-TGTTTG--GAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000
.................................................................................................................................................................................................................................................................................AATCACTAAAGGCTTGTTGTCA.................................................................................................................................................................................................................................................................................................................................2211.00100100
.................................................................................................................................................................................................................................................................................AATCACTAAAGGCTTGTTGTCACATTC............................................................................................................................................................................................................................................................................................................................2711.00100001
................................................................................................................................................................................................................................................................TTATCAAGTTACTAGCAAATCAC.................................................................................................................................................................................................................................................................................................................................................2311.00100010
...........................................................................................................................................................CCCATTCAGC-CGGAGTATATAGT-T...................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
...................................................................................................................................TTGG----CCAGTTTCATTCGCATCCCATTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
......................................................................................................................................................CGCATCCCATTCAGC-CGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
.........................................................................................................................................................................................................................ATCGTGTTATTCCGGGGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
....................................................................................................................................................................................................................AATATATCGTGTTATTCCGGGGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
..............................................................................................................................................................................................................................................AATAAAGAGTGTTT--GCTTAT....................................................................................................................................................................................................................................................................................................................................................................2011.00100100
...............................................................................................................................................................................................................................................................................CAAATCACTAAAGGCTTGTTGTCACATT.............................................................................................................................................................................................................................................................................................................................2811.00100001
..................................................GTGAGTATAT-CTA-AT-------T---GTT------------TAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.......................................................................................................................................................................................TTG--GACGAATTGTAGG--CTTGG........................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
..............................................................................................................................................................................ATAGT-TGTTTG--GACGAATTGTAGG--.............................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
........................................................................................................................................................................................................................TATCGTGTTATTCCGGGGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
............................................................................................................................................................................ATATAGT-TGTTTG--GACGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
....................................................................................................................................................................................................GTAGG--CTTGGCTAGAATATATCGTGT........................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
.................................................................................................................................................................................................................................................................................AATCACTAAAGGCTTGTTGTCACATTCC...........................................................................................................................................................................................................................................................................................................................2811.00100010
..................................................................................................................................................CATTCGCATCCCATTCAGC-..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
......................................................................................................................................................CGCATCCCATTCAGC-CGGAGTAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
.................................................................................................................................................................................................................................ATTCCGGGGCAGCAATAAAG...................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
.....................................................................................................................................................................................................................................................................................ACTAAAGGCTTGTTGTCACATTCC...........................................................................................................................................................................................................................................................................................................................2411.00100001
..................................................................................................................................................CATTCGCATCCCATTCAGC-C.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
....................................................................................................................................................................................................................AATATATCGTGTTATTCCGGGGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
...................................................................................................................................................ATTCGCATCCCATTCAGC-CGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
.......................................................................................................................................................GCATCCCATTCAGC-CGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
......................................................................................................................................................CGCATCCCATTCAGC-CGGAGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
...........................................................................................................................................................................................................CTTGGCTAGAATATATCGT..........................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001
....................................................................................................................................................................................................................AATATATCGTGTTATTCCGGGGC.............................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
......................................................................................................................................................CGCATCCCATTCAGC-CGGAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
...................................................................................................................................TTGG----CCAGTTTCATTCGCAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100001
........................................................................................................................................................................................................................................................................................AAAGGCTTGTTGTCACATTCC...........................................................................................................................................................................................................................................................................................................................2111.00101000
............................................................................................................................................................................................................TTGGCTAGAATATATCGT..........................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
.................................................................................................................................................................................................................................................AAAGAGTGTTT--GCTTATCAAG................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.....................................................................................................................................................................................................................................CGGGGCAGCAATAAAGAGTGTTT--GC........................................................................................................................................................................................................................................................................................................................................................................2511.00100010
.....................................................................................................................................................................................GTTTG--GACGAATTGTAGG--CTTGGCTAGA...................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
......................................................................................................................................................CGCATCCCATTCAGC-CGGAGTATATAGT-....................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
...............................................................................................................................................................................................................................................................CTTATCAAGTTACTAGCAAATCA..................................................................................................................................................................................................................................................................................................................................................2311.00100001
droVir3
TTAATAAATTTGGACCCATCGAACGTATTCAAATGGTCATAGATGCTCATGTAAGTGCCA-TCGAATC----------AAT------------TTGCAA----------------------TCAACAGCCATCAGTTGATCAGT-----TCG----TATCTTGGACATAAGCT-TGTGCTAGTTGC--GTAC----TGACT--TTTGGCAATAGCATATT--------TAAATGCAGCAATAATGAGTGCCT--GCTATGCAAGTTACTAGCAACCCACTAAAGGCTTGCTGCAACATCTATATATTAGGAGG---AAAACCTAGATTATAAGTTAA--------------------------ATT-----------ATCAATAGCATAAATTACACTCGACGACTGC--AACGTACGACTCTGTAAGATG----------ACT------------------------------------------------------------------------------------GTGA---ATTATC-CAATAA-----T-AATTCTTGCAGACCCATCGCTCTCGGGGCTTTTGCTTCATATACTTTGAGAATCTCGGTGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................CAGCCATCAGTTGATCAGT-----...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1916.006011100000000000000000000000000000000000000000000000000000002010
................................................................................................................................................................................................................................................................................AACCCACTAAAGGCTTGCTGCAACATCT............................................................................................................................................................................................................................................................................................................................2815.005103100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................CAGCCATCAGTTGATCAGC-----...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.003100000000000000100000000000000000100000000000000000000000000000
............................................................................................................................ACAGCCATCAGTTGATCAGT-----...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.003200000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................CAGCCATCAGTTGATCAGT-----TCG----TATCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.003101000000000000000000000000000000000000000000000000000000001000
.....................................................................................................................................................................................................................................................................................ACTAAAGGCTTGCTGCAACATCTA...........................................................................................................................................................................................................................................................................................................................2413.003001100000000000000000000000000000000000000000000000000001000000
..................................................................................................................................ATCAGTTGATCAGT-----TCG----TATCTTGGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002000100000000000000000000000000000000000000000000000000000000010
......................................................................................................................................GTTGATCAGT-----TCG----TATCTTGGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002001100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................CAGCCATCAGTTGATCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1712.002000000000000000000000000000000000000000000000000000000000000002
.................................................................................................................................................................................................................................................................................ACCCACTAAAGGCTTGCTGCAACATCT............................................................................................................................................................................................................................................................................................................................2712.002001000000000000100000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................AAAGGCTTGCTGCAACATCTA...........................................................................................................................................................................................................................................................................................................................2112.002000000000000000200000000000000000000000000000000000000000000000
.............................................................................................................................CAGCCATCAGTTGATCAGT-----TC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000200000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................AAAGGCTTGCTGCAACATCT............................................................................................................................................................................................................................................................................................................................2012.002000000000000001100000000000000000000000000000000000000000000000
.............................................................................................................................CAGCCATCAGTTGATCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002001000000000000000000000010000000000000000000000000000000000000
............................................................................................................................ACAGCCATCAGTTGATCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000000000000010000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................................................................CACTAAAGGCTTGCTGCAACATCT............................................................................................................................................................................................................................................................................................................................2412.002011000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................CT-TGTGCTAGTTGC--GTAC----T...................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
....................GAACGTATTCAAATGGTCATAGATGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000010000000000000000000000000000000
.................................................................................................................................CATCAGTTGATCAGT-----TCG----TATCTTGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................ATCAGTTGATCAGT-----TCG----TATCTTGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
........................GTATTCAAATGGTCATAGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................ACATAAGCT-TGTGCTAGTTGC--GTAC----T...................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
........................GTATTCAAATGGTCATAGATGCTCATAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................T-TGTGCTAGTTGC--GTAC----TGACT--TTTGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
TTAATAAATTTGGACCCATCGAACGTATTCAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3211.001000000000000000000000000000000000000000000000000000010000000000
...............................................................................................................................................................................................................................................................................CAACCCACTAAAGGCTTGCTGC...................................................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................AGCCATCAGTTGATCAGT-----TCG----TATCTTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................GTTGATCAGT-----TCG----TATCTTGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................CAGCCATCAGTTGATCAGT-----TCG----TAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000010
.....AAATTTGGACCCATCGAACGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................AATGCAGCAATAATGAGTGCC.............................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................CACTAAAGGCTTGCTGCAACATCTA...........................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................GCT-TGTGCTAGTTGC--GTAC----T...................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................CCCACTAAAGGCTTGCTGCAACATCT............................................................................................................................................................................................................................................................................................................................2611.001000000000000001000000000000000000000000000000000000000000000000
.............................................................................................................................CAGCCATCAGTTGATCAGT-----TCG----T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................CAGCCATCAGTTGATCAGG-----...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................CTAAAGGCTTGCTGCAACATCTA...........................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................AGCCATCAGTTGATCAGT-----...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................CAGCCATCAGTTGATCAGT-----T..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................ATAAGCT-TGTGCTAGTTGC--GTAC----T...................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................ATT--------TAAATGCAGCAATAATGAGT................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................CAGCCATCAGTTGATCAGT-----TCG----TATCTTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................ACAGCCATCAGTTGATCAGC-----...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................AGGCTTGCTGCAACATCTA...........................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................AGTTGC--GTAC----TGACT--TTTGG........................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCTCTCGGGGCTTTTGCTTCATATAC.................2811.001000000000000000000000000000000100000000000000000000000000000000
...................................................................................................................................................................GACATAAGCT-TGTGCTAGTTGC--GTAC----T...................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................AGCCATCAGTTGATCAGT-----TCG----TA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000000000000000000000000000000000000000000000000000000000000
............................................................................................................................ACAGCCATCAGTTGATCAGT-----TCG----T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................ACAGCCATCAGTTGATCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.501000000000010000000000000000000000000000000000000000000000000000
..............................................................................................................................AGCCATCAGTTGATCAGC-----C..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.331000010000000000000000000000000000000000000000000000000000000000
.............................................................................................................................CAGCCATCAGTTGATCAAA-----...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.251000000000000000000000000100000000000000000000000000000000000000
droMoj3
TTAATAAATTTGGACCCATTCAACGTATTCAGATGGTTATCGATGCTCAAGTATGTTAAA-TTTTAAAGTTTC-----------A----ACTTA-T--------TTATCAAAATGCCATAATCTGTC--TGTGGG---------------------CAACTTGGAACTTAGCC-TCTTCCA--AGT--GCCA----TCTTT--CTTGGCTATATCATATA--------TAAGTACAACAATAATGAGTGTTT--GCTATGTGAGTTACTAGCAATTCACTAAAGGCTTGTTGTAACATCCATATTTTAGTTTT---A------A------------------------------------------TCGTTATT------------------------------------------------------GAT----------CTCTGTA---------------------------------------------------------------------------------------------------------------------------------------TT-------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................................................................................................................................................AAAGGCTTGTTGTAACATCCA...........................................................................................................................................................................................................................................................................................................................2113.003300000
..................................................................................................................................................................................................................................................................................TTCACTAAAGGCTTGTTGTAACATCC............................................................................................................................................................................................................................................................................................................................2613.003110010
.........................................................................................................................................................................................................................................................................................AAGGCTTGTTGTAACATCCA...........................................................................................................................................................................................................................................................................................................................2013.003300000
........................................................................................................................................................................................................................................................................................AAAGGCTTGTTGTAACATCC............................................................................................................................................................................................................................................................................................................................2012.002200000
.......................................................................................................................................................................................................................................................................................TAAAGGCTTGTTGTAACATCCA...........................................................................................................................................................................................................................................................................................................................2212.002200000
....................................................................................................................................................................................................................................................................................CACTAAAGGCTTGTTGTAACATCCA...........................................................................................................................................................................................................................................................................................................................2512.002100100
.......................................................................................................................................................................................................................................................................................TAAAGGCTTGTTGTAACATCC............................................................................................................................................................................................................................................................................................................................2112.002000110
..................................................................................................................................................................................................................................................................................TTCACTAAAGGCTTGTTGTAACATCCA...........................................................................................................................................................................................................................................................................................................................2711.001100000
................................................................................................................ATGCCATAATCTGTC--TGTGGG---------------------CAACTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
..................................................................................................................................................................................................................ATATCATATA--------TAAGTACAACAAT.......................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
................................................................................................................................................................................................................................................................................AATTCACTAAAGGCTTGTTGTAACATCCA...........................................................................................................................................................................................................................................................................................................................2911.001000001
.....................................................................................................................................................................................................................................................................................ACTAAAGGCTTGTTGTAACATCCA...........................................................................................................................................................................................................................................................................................................................2411.001100000
................................................................................................................ATGCCATAATCTGTC--TGTGGG---------------------CAACTTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.............................................................................................................................................................AACTTGGAACTTAGCC-TCTTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
...................................................................................................................................................................................................................................................................................TCACTAAAGGCTTGTTGTAACATCC............................................................................................................................................................................................................................................................................................................................2511.001100000
....................................................................................................................................................................................................................................................................................CACTAAAGGCTTGTTGTAACATCC............................................................................................................................................................................................................................................................................................................................2411.001100000
................................................................................................................ATGCCATAATCTGTC--TGTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
...............................................................................................................AATGCCATAATCTGTC--TGTGGG---------------------CAACTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
................................................................................................................................................................................................................................................................................AATTCACTAAAGGCTTGTTGTAACATCC............................................................................................................................................................................................................................................................................................................................2811.001100000
......................................................................................................................................................................................................................................................................................CTAAAGGCTTGTTGTAACATCC............................................................................................................................................................................................................................................................................................................................2211.001000010
.................................................................................................................TGCCATAATCTGTC--TGTGGG---------------------CA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000
................................................................................................................ATGCCATAATCTGTC--TGTGGG---------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droGri2
TCAATAAATTCGGACCCATCGAACGCATCCAAATGGTCATCGATGCTCATGTAAGTGGGG-GGAT---------------------TCAACTTA-A--------TT-------GCCAAAATTGTGCCATTAATATTTGGTCAGC-----GTG----CAATTTGGACTTGAGCT-TCTGC-TGAGTT--GCGTGTCTGGCGT--TTTGGCAA-ACAGTATT--TCTATTTAAATGCAGCAATAATGAGTGTTT--GCTATGCGAATCACTAGCAATTCACTAAAGGCTTGCTGTAACATAAACATATATTTTGA---A---------------------------------------------TTC--------------------------------------------------------------------------------------------------------ACTCCATATTCTGTATT-----------------CACTA------------------------TTA--------------TTTAC-CATCCTTGTAGACTCATCGCTCTCGCGGCTTTTGCTTCATTTACTATGAGAATATCGGGGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
TCAACAAGTTCGGGCCGATAGAGCGCATTCAAATGGTCATTGATGCACATGTAAGTAAAC-TTTAAGTA----TTCT--------------------GA-ACTCTT--------GCCGCAACGGATCTAGAT-GG---------------------CTTAACAGCATAAAGCC--TTGC-TGTAAAGTCCTC----CGATT--TATGGCTAGATTATACC-----------TGTCAGCAATTATGTGTTTTT--GA-----CATTTCAAAGCCAAAAACTAAAGGCTTGCTGTCACACTCAAATAGTGC-------------------------------------------------------------------------------AAATTTTTCACGA---TTCAATAAGAACC-------------------------------------------------------------------------------------------------------------------TAT--------------CCTCG-TGGTCGAACAGACCCACCGCTCTCGAGGATTCTGCTTTATTTATTTCGAGAATCTCAGCGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................................................................................................................................................AACTAAAGGCTTGCTGTCACACTC............................................................................................................................................................................................................................................................................................................................241186.001868344201047
......................................................................................................................................................................................................................................................................................CTAAAGGCTTGCTGTCACACTC............................................................................................................................................................................................................................................................................................................................22159.0059187001321
.....................................................................................................................................................................................................................................................................................ACTAAAGGCTTGCTGTCACACTC............................................................................................................................................................................................................................................................................................................................23149.004911510131
...................................................................................................................................................................................................................................................................................AAACTAAAGGCTTGCTGTCACACTC............................................................................................................................................................................................................................................................................................................................25135.003561700111
....................................................................................................................................................................................................................................................................................AACTAAAGGCTTGCTGTCACACTCA...........................................................................................................................................................................................................................................................................................................................25128.00281811026
......................................................................................................................................................................................................................................................................................CTAAAGGCTTGCTGTCACACTCA...........................................................................................................................................................................................................................................................................................................................23121.00211120053
........................................................................................................................................................................................................................................................................................AAAGGCTTGCTGTCACACTC............................................................................................................................................................................................................................................................................................................................20117.00172300111
.........................................................................................................................................................................................................................................................................................AAGGCTTGCTGTCACACTC............................................................................................................................................................................................................................................................................................................................19114.00143000011
.......................................................................................................................................................................................................................................................................................TAAAGGCTTGCTGTCACACTC............................................................................................................................................................................................................................................................................................................................21112.00120000012
..................................................................................................................................................................................................................................................................................AAAACTAAAGGCTTGCTGTCACACTC............................................................................................................................................................................................................................................................................................................................26111.00110000110
...................................................................................................................................................................................................................................................................................AAACTAAAGGCTTGCTGTCACACTCA...........................................................................................................................................................................................................................................................................................................................26110.0010510004
.......................................................................................................................................................................................................................................................................................TAAAGGCTTGCTGTCACACTCA...........................................................................................................................................................................................................................................................................................................................22110.0010200008
.........................................................................................................................................................................................................................................................................................AAGGCTTGCTGTCACACTCA...........................................................................................................................................................................................................................................................................................................................2017.007100006
.................................................................................................................................................................................................................................................................................AAAAACTAAAGGCTTGCTGTCACACTC............................................................................................................................................................................................................................................................................................................................2716.006010005
................................................................................................................................................................................................................................................................................CAAAAACTAAAGGCTTGCTGTCACACTC............................................................................................................................................................................................................................................................................................................................2816.006000006
.....................................................................................................................................................................................................................................................................................ACTAAAGGCTTGCTGTCACACTCA...........................................................................................................................................................................................................................................................................................................................2416.006400002
......................................................................................................................................................................................................................................................................................CTAAAGGCTTGCTGTCACAC..............................................................................................................................................................................................................................................................................................................................2015.005110003
.......................................................................................................CTT--------GCCGCAACGGATCTAGAT-GG---------------------CTTAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2914.004301000
..................................................................................................................................................................................................................................................................................AAAACTAAAGGCTTGCTGTCACACTCA...........................................................................................................................................................................................................................................................................................................................2714.004100003
........................................................................................................................................................................................................................................................................................AAAGGCTTGCTGTCACACTCA...........................................................................................................................................................................................................................................................................................................................2114.004100003
..........................................................................................................................................................................................................................................................................................AGGCTTGCTGTCACACTCA...........................................................................................................................................................................................................................................................................................................................1913.003100002
.......................................................................................................CTT--------GCCGCAACGGATCTAGAT-GG---------------------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.003101001
....................................................................................................................................................................................................................................................................................AACTAAAGGCTTGCTGTCACAC..............................................................................................................................................................................................................................................................................................................................2213.003010002
................................................................................................................................................................................................................CTAGATTATACC-----------TGTCAGC..........................................................................................................................................................................................................................................................................................................................................................................................1912.002020000
....................................................................................................................................................................................................................................................................................AACTAAAGGCTTGCTGTCACACT.............................................................................................................................................................................................................................................................................................................................2312.002100001
.......................................................................................................CTT--------GCCGCAACGGATCTAGAT-GG---------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002010001
.....................................................................................................................................................................ATAAAGCC--TTGC-TGTAAAGTCCTC----C...................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002020000
.....................................................................................................................................................................................................................................................TGTTTTT--GA-----CATTTCAAAGCC.......................................................................................................................................................................................................................................................................................................................................................2112.002020000
...................................................................................................................................................................................................................................................................................AAACTAAAGGCTTGCTGTCACACT.............................................................................................................................................................................................................................................................................................................................2412.002200000
....................................................................................................................................................................................................................ATTATACC-----------TGTCAGCAATTAT....................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.......................................................................................................................AACGGATCTAGAT-GG---------------------CTTAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.........................................................................................................................................................................AGCC--TTGC-TGTAAAGTCCTC----CG..................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
........................................................................................................................................................................................................................................................................................AAAGGCTTGCTGTCACAC..............................................................................................................................................................................................................................................................................................................................1811.001000100
..........................................................................................................................................................................................................................................................TT--GA-----CATTTCAAAGCCAAAA...................................................................................................................................................................................................................................................................................................................................................2011.001010000
...................................................................................................................................................................................................................................................................................AAACTAAAGGCTTGCTGTCACAC..............................................................................................................................................................................................................................................................................................................................2311.001100000
.....................................................................................................................GCAACGGATCTAGAT-GG---------------------CTTAACAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
....................................................................................................................................................................................................................................................................................AACTAAAGGCTTGCTGTCACACA.............................................................................................................................................................................................................................................................................................................................2311.001000001
..........................................................................................................................................................................GCC--TTGC-TGTAAAGTCCTC----CGA.................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
........................................................................................................TT--------GCCGCAACGGATCTAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
........................................................................................................TT--------GCCGCAACGGATCTAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...................................................................................................................................................................................................................GATTATACC-----------TGTCAGCAATTATGTGT................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
...........................................................................................................................GATCTAGAT-GG---------------------CTTAACAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
............................................................................................................................................................................................................................................GCAATTATGTGTTTTT--GA-----C..................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.......................................................................................................CTT--------GCCGCAACGGATCTAGAT-GG---------------------CT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
....................................................................................................................................................................CATAAAGCC--TTGC-TGTAAAGTCCTC----C...................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
.........................................................................................................T--------GCCGCAACGGATCTAGAT-GG---------------------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000
.....................................................................................................................................................................................................................................................................................ACTAAAGGCTTGCTGTCACACT.............................................................................................................................................................................................................................................................................................................................2211.001000001
..........................................................................................................................................................................................................................................................TT--GA-----CATTTCAAAGCCAAAAAC.................................................................................................................................................................................................................................................................................................................................................2211.001010000
........................................................................................................................................................................................................T--TATGGCTAGATTATACC-----------TGTCA............................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
..................................................................................................................GCCGCAACGGATCTAGAT-GG---------------------CTTAACAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001010000
.....................................................................................................................................................................................................GATT--TATGGCTAGATTATACC-----------TGTC.............................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
......................................................................................................................CAACGGATCTAGAT-GG---------------------CTTAACAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.......................................................................................................................................................................................................................................................................................TAAAGGCTTGCTGTCACA...............................................................................................................................................................................................................................................................................................................................1811.001010000
.................................................................................................................................................................................................................................................................................AAAAACTAAAGGCTTGCTGTCA.................................................................................................................................................................................................................................................................................................................................2211.001000010
.....................................................................................................................................................................................................................................................................................ACTAAAGGCTTGCTGTCACA...............................................................................................................................................................................................................................................................................................................................2011.001100000
......................................................................................................................................................................................................................................................................................CTAAAGGCTTGCTGTCACACT.............................................................................................................................................................................................................................................................................................................................2111.001010000
........................................................................................................................................................................AAGCC--TTGC-TGTAAAGTCCTC----C...................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.......................................................................................................................................................................................................TT--TATGGCTAGATTATACC-----------TGT..............................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
..................................................................................................................................................................................................................................................................................AAAACTAAAGGCTTGCTGTCACA...............................................................................................................................................................................................................................................................................................................................2311.001000001
..........................................................................................................................................................................................................................CC-----------TGTCAGCAATTATGTGTT...............................................................................................................................................................................................................................................................................................................................................................................2011.001001000
.......................................................................................................CTT--------GCCGCAACGGATCTAGAT-G..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
........................................................................................................TT--------GCCGCAACGGATCTAGAT-GG---------------------CTTAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.................................................................................................................................................................................................................................................................................AAAAACTAAAGGCTTGCTGTC..................................................................................................................................................................................................................................................................................................................................2111.001010000
.......................................................................................................................................................................AAAGCC--TTGC-TGTAAAGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
........................................................................................................TT--------GCCGCAACGGATCTAGAT-GG---------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
....................................................................................................................................................................................................................ATTATACC-----------TGTCAGCAATTATGTGTT...............................................................................................................................................................................................................................................................................................................................................................................2611.001001000
.....................................................................................................................................................................ATAAAGCC--TTGC-TGTAAAGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
....................................................................................................................CGCAACGGATCTAGAT-GG---------------------CTTAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
.......................................................................................................................................................................................................TT--TATGGCTAGATTATACC-----------T................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
droBip1
TCAGCAAGTTCGGGCCGATAGAACGCATTCAGATGGTCATTGATGCGCATGTAAGTGAAC-CTTTCCAGTA--TTC--------------------TCA-ACCTTT--------GCCA-AATGTATTTA-GAATG---------------------CTTAGCAGCACTAAGCC--TTGT-TGCAAAGCTCTC----CGATC--TCTGGCTAGATTATATC-----------TGAAAGCAATTATGAGTTTTT--GC-----ATTTTCGTAGTCAAAAACTAAAGGCTTGCTGTCACAATCACAGTA---------------------------------------------------------------------------------AAAATTGTACACGA---ATCAATA-GAACG-------------------------------------------------------------------------------------------------------------------T---------------TATCTTGTGGCCCAACAGACCCACCGCTCTCGAGGATTTTGCTTTATTTACTTCGAGAATCTCAGCGASizeHit CountTotal NormTotal
No Reads
droKik1
TCAACAAGTTTGGACCTATCGAGCGCATCCAGATGGTCATCGATGCTCACGTAAGTGGGG-GGTCACCAAGGGGGCTT---------------TA--TG-TATTGT--------GCCAGGATACATTTAAATGGG---------------------CCGAACTGCTTAGAGAC--TGGT-GGTTCC--GACC----AGAATTTACTGGCTATATTAAAGT-----------AGACAGCAATTATGAGCTCTT--GT-----GCATTCGAAACTAAGAGCTAAAGGCTTGCTTTCACAATTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TCAATAAGTATGGTCCCATTGAACGCATCCAGATGGTCATTGATGCACATGTAAGAGGCG-TTCA--AAAACATT--T---------------ATACTA-ACTCCC--------GCCTGAAGTAATTTTAGTCGA---------------------CAATTCGGC-TGAAGCC--TTGC-AGTTTT--GTCT----TTATT--TCCGGCTAAATAATAGA-----------AGATGGCGATTGTGAGCTTAT--GT-----GAATTCCAAACTATAAGCTAAAGGCTTGCTGTCACATTCCTATAGATTT-------------A------------------------------------------TCTTTAATAATGTCAATATTACAAATT-TACTCAACTGCTCAAAAATGCTTT-GCACATTTAGTT----------GCCTTCA--TTTAGA----------------------------------------------------------------------------TAAATCACCACATTTG-----T-ATTTTCAACAGACTCATCGTTCCCGAGGCTTCTGCTTCATTTACTTTGAGAATCTCGAGGASizeHit CountTotal NormTotal
No Reads
droEle1
TTAACAAGTACGGACCCATCGAGCGCATTCAGATGGTCATCGACGCACATGTAAGAGATG-TTTTCAAAATCAAAAAT---------------AACATA-CCTCCT--------GCCGGAATGCATTTGAGTATA---------------------CAAATCAGCTTGAAGCC--TTGC-AGTTCT--GTTC----TCATT--TCCGGCTAGATTATAGT-----------AGGCAGCGATTTTGAGCTTTT--GT-----GTATTCCAAACTATTAGCTAAAGGCTTGCTGTCACATCCACTTATACAC------ATTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGAGTTT-------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TTAACAAGTACGGACCCATCGAGCGAATCCAGATGGTCATCGACGCTCATGTAAGAAATT-TTCT--CAGTCATCGTA---------------AAGATA-CCTCCT--------GCCAGAATGCAGTTGAACATA---------------------CTAATCGGCTTGAAGTC--TTGC-AGTTTT--GTTC----TCGTT--TTCGGCTAGATTAAAGT-----------AGACAGCGATTGTGAGCTTTT--GT-----GTACTCCAAACTATAAGCTAAAGGCTTGCTGTCACATCCACGTATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TCAACAAGTACGGACCCATCGAGCGCATCCAGATGGTCATCGACGCTCATGTAAGATTTGCTTTTGCCATACCCCCTT---------------AAGACA-ACTCGC--------GCCGGAACATCTACGAGTAGG---------------------CA-ATCAGCTTAAAGTC--TTGC-TGCTTT--GTCC----TCATT--TCTGGCTAGATTGAAGT-----------AGAGGGCGATTGTGAGCTTTT-CGT-----GTATTCCAAACTTAAAGCTAAAGGCTTGCCGTCACATTTGCATTACTACGTTTTAG---------------------------------------------GATT-----------------------------------------------------GCCAGCATAGTCCTATATTTTTACTACAACACTC-------------------------------------------------------------------------------TC-A----------TAAATCTTT-TGCCATACAGACACATCGTTCGCGGGGCTTCTGCTTCATTTACTTTGAGAATCTCGAGGASizeHit CountTotal NormTotal
No Reads
droTak1
TCAACAAGTACGGACCCATCGAGCGCATCCAAATGGTCATCGATGCACATGTAAGAGTGG-TTTTAAAGTTCCCTACT---------------GAGAGA-A---CT--------GCCCGATTAACTTTGAGT-GA---------------------GAAATCTGC-TGAAGCC--CTGC-AGATTT--TCCT----TCAAT--TCTGGCTAGACTATAGT-----------AGACGGCGATTGTGTGCTTTTGTGT-----GTAGTCCAAACTAAAAGCAAAAGGCTTGCTGTCACATTTGCATAATGTTTAT---A----CCAGTTTAATGGCTAA--------------------------TTT-----------------------------------------------------ATTTATATTCTT----------ACTAAAA--CTCTTT------------------------------------------------------------------------------------------GAAATCTCT-TCCCACACAGACACATCGTTCGCGGGGCTTCTGCTTCATTTACTTTGAGAATCTCGAGGASizeHit CountTotal NormTotal
No Reads
droEug1
TCAACAAGTACGGACCCATTGAACGTATCCAAATGGTCATCGACGCTCATGTAAGACTAG-TTCTAAAATTCAGTATT---------------ATAATA-ACTCTT--------GCCTGAATGCATTTGATTAGG---------------------CAACTCGGT-TGAAGTT--GTGC-AGTTTT--GTCA----TAATT--TCCGGCTAGATTACAAT-----------AGACAGTGATTATGAGCTTTT--GT-----GCATTCCAAACTAAAAGCTAAAGGCTTGCTGTCACACTGA-AAACTATTCAC---AACAAA-A------------------------------------------TG------------------------------------------------------------GTT----------TTT------------ATTTTCCAAAAT----ATATACACATTTATATAAAAAAAATGAAATTCCGAAACCAATTCATATTCTGCCCTGTACTG-ATTAA----------CTTAT-AAACATACAGACACATCGTTCGCGTGGCTTCTGCTTCATATACTTTGAGAATCTCGAGGASizeHit CountTotal NormTotal
No Reads
dm3
TCAACAAGTACGGACCTATCGAACGCATCCAGATGGTGATTGACGCACAAGTAAGTCGGT-TTTCGATAAGCATTGCT---------------AAGATA-TTTCCT--------GCCTGAATCCTTTTGTGTAGA---------------------CAAATCCGC-TGAAGCC--CTGC-AGTTTT--GTCT----TAATT--TCTGGCTAGATAAAATT-----------TGATAGCGATTGTGAGTTTTT--GT-----GTATTCCAAACTAAAAGCTAAAGGCTTGCTGTCACAGTGGCATATTGTTCGA---AGGAAATA------------------------------------------TT------------------------------------------------------------GAT----------CTC-----------------CCGAAATCAATATGTGTTCAGTTGT-TAGGAAAGTTCAAGTTCACAAAC------------------GTAG---ATTAAC-CCTTAATAACTTC-TGACATACAGACACAGCGTTCCCGGGGCTTTTGTTTCATTTACTTTGAGAAACTCAGCGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
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Head		SRR031700
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Head		SRR031702
Head		SRR031703
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Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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..............................................................................................................................................................................................................................................................................ACTAAAAGCTAAAGGCTTGCT.....................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................TTTTGTGTAGA---------------------CAAATCCGC-..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................CAAATCCGC-TGAAGCC--CTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................CTAAAGGCTTGCTGTCACAGT.............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................CCT--------GCCTGAATCCTTTTGTGTAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................GCTAAAGGCTTGCTGTCACAGTGC...........................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................ATCCTTTTGTGTAGA---------------------CAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................CCT--------GCCTGAATCCTTTTGTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................CTTTTGTGTAGA---------------------CAAATCCGC-TGAAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
...............................................................................................................................................................................................................GCTAGATAAAATT-----------TGATAGCGATTG.....................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................AGCGATTGTGAGTTTTT--GT-----G..................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......................................................................................................................................................................................................................................................................................TAAAGGCTTGCTGTCACA...............................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAACTTC-TGACATACAGACA...............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TCCAGATGGTGATTGACGCAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................TGAGTTTTT--GT-----GTATTCCAAACT.......................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.................ATCGAACGCATCCAGATGGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................TGATAGCGATTGTGAGTTTTT--GT-----GTATT..............................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................CTGGCTAGATAAAATT-----------TGATAGCGA........................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................CCGC-TGAAGCC--CTGC-AGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................AGCGATTGTGAGTTTTT--GT-----GT.................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................AGA---------------------CAAATCCGC-TGAAGCC--CTGC-AC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................GATTGTGAGTTTTT--GT-----GTATTC.............................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCGGGGCTTTTGTTTCATT....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................AAGGCTTGCTGTCACAGTGGA..........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................AAACTAAAAGCTAAAGGCTTGCTGT...................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTC-TGACATACAGACACAGCG..........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................AAATCCGC-TGAAGCC--CTGC-AGTTTT--............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................GTGAGTTTTT--GT-----GTATTCC............................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
....................................................................................................................................................................................................................ATAAAATT-----------TGATAGCGATTGTGA..................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.....................AACGCATCCAGATGGTGATTGACGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................AAAAGCTAAAGGCTTGCTGTCACAGTG............................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................GTAGA---------------------CAAATCCGC-TGAAGCC--.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................CCT--------GCCTGAATCCTTTTGTGTAGA---------------------CAAATCCGC-TG................................................................................................................................................................................................................................................................................................................................................................................................................................................................3511.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................TGGCTAGATAAAATT-----------TGATAGCGA........................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................CCTTTTGTGTAGA---------------------CAAATCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGT-TAGGAAAGTTCAAGTTC................................................................................................................2111.0010000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................ATCCTTTTGTGTAGA---------------------CAAATCCGC-..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................ATT-----------TGATAGCGATTGTGAGTT...............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCGTTCCCGGGGCTTTTG...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
........................................................................................................................................................................................................T--TCTGGCTAGATAAAATT-----------TGATAGCATC.......................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TAAAATT-----------TGATAGCGATTGTGA..................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...............................................................................................................................TGTGTAGA---------------------CAAATCCGC-TGAAGCC--A........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................GTGGCATATTGTTCGA---AGGAA.......................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
droSim2
TCAACAAGTACGGACCCATCGAGCGCATCCAGATGGTGATTGACGCACAAGTAAGTCGGG-TTTCAATAAGCATTGCT---------------AAGATA-TTTCCT--------GCCTGAATCTTATTGTGTAGA---------------------CAAATCAGC-TGAAGCC--CTGC-AGTTTT--GTCT----TAATT--TCTGGCTAGATAAAATT-----------TGATAGCGATTGTGAGTTTTT--GT-----GTATTCCAAACTAAAAGCTAAAGGCTTGCTTTCACAGTGGCATATTGTTCGA---AGGACATA------------------------------------------TTGATATT------------------------------------------------------GAT----------C-------------------CCGAAATCAATATGTATTCAGTTGT-TAGGAAAAT--------ACAAAC------------------ATAG---ATTAAA-CCTTAATATCTTC-TGACATACAGACACAGCGTTCCCGGGGCTTTTGTTTCATTTACTTTGAGAAACTTAGCGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................GCTAAAGGCTTGCTTTCACAGTG............................................................................................................................................................................................................................................................................................................................2314.00400040000000000000
.....................................................................................................................................................................................................................................................................................GCTAAAGGCTTGCTTTCACAGTGG...........................................................................................................................................................................................................................................................................................................................2413.00300030000000000000
.......................................................................................................CCT--------GCCTGAATCTTATTGTGTAGA---------------------CA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.00300030000000000000
.......................................................................................................CCT--------GCCTGAATCTTATTGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200000200000000000
........................................................................................................................................................................................................................................GATAGCGATTGTGAGTTT..............................................................................................................................................................................................................................................................................................................................................................................1812.00200200000000000000
....................................................................................................................................................................................................................................................................................AGCTAAAGGCTTGCTTTCACAGTGG...........................................................................................................................................................................................................................................................................................................................2512.00200020000000000000
.......................................................................................................CCT--------GCCTGAATCTTATTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00210010000000000000
..............................................................................................................................................................................................................GGCTAGATAAAATT-----------TGATAGCGAT.......................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
........................................................................................................................ATCTTATTGTGTAGA---------------------CAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGTTGT-TAGGAA...........................................................................................................................1511.00100000000001000000
..................................................................................................................................GTAGA---------------------CAAATCAGC-TGAAGCC--C........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
......AGTACGGACCCATCGAGCGCATCCAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
........................................................................................................................ATCTTATTGTGTAGA---------------------CAAATCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
..........................................................................................................................................................................................................................................................................................................TGGCATATTGTTCGA---AGGAC.......................................................................................................................................................................................................................................................................................................2011.00100000000000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCATTTACTTTGAGAAACTTAGC..2411.00100100000000000000
.............................................................................................................................................................AAATCAGC-TGAAGCC--CTGC-A...................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
..........................................................................................................................................................................................................................................................TT--GT-----GTATTCCAAACTAAAAGCTAAAG............................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
.......................................................................................................CCT--------GCCTGAATCTTATTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000100000000000
..................................................................................................................GCCTGAATCTTATTGTGTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCTTC-TGACATACAGACACAGCGT.........................................2611.00100000010000000000
..................................................................................................................GCCTGAATCTTATTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.00100000000001000000
............................................................................................................................................................................................................................................................................AAACTAAAAGCTAAAGGCTTGCTTTCACA...............................................................................................................................................................................................................................................................................................................................2911.00100001000000000000
...........................................................................................................................................................................................................................................AGCGATTGTGAGTTTTT--GT-----GTATTCCA...........................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
.......................................................................................................CCT--------GCCTGAATCTTATTGTGTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000001000000
.CAACAAGTACGGACCCATCGAGCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
................................................................................................................................................................................................................................................................................TAAAAGCTAAAGGCTTGCTTTCACAGTG............................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
...............................GATGGTGATTGACGCACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
.....................................................................................................................TGAATCTTATTGTGTAGA---------------------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
...........................................................................................................................................................................................................TCTGGCTAGATAAAATT-----------TGATAGC..........................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
...................................GTGATTGACGCACAAGTAAGTCGGG-...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110000000000000000
.......................................................................................................CCT--------GCCTGAATCTTATTGTGTAGA---------------------CAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100010000000000000
.......GTACGGACCCATCGAGCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
.........................................................................................................................................................................................................................ATT-----------TGATAGCGATTGTGAGTT...............................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
.....AAGTACGGACCCATCGAGCGCATC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
.......................................................................................................CCT--------GCCTGAATCTTATTGTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000100000
...............................................................................................................................................................................................................................................................................CTAAAAGCTAAAGGCTTGCTTTCAC................................................................................................................................................................................................................................................................................................................................2511.00100001000000000000
..........................................................................................................................................................................................................................................................................................................TGGCATATTGTTCGA---AGGACA......................................................................................................................................................................................................................................................................................................2111.00101000000000000000
.......................................................................................................CCT--------GCCTGAATCTTATTGTGTAGA---------------------CAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
.....................................................................................................................................................................................................................................................................................GCTAAAGGCTTGCTTTCACAGTGT...........................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
............................................................................................................................................................................................................................................................................................................GCATATTGTTCGA---AGGACATA------------------------------------------..........................................................................................................................................................................................................................................................2111.00100000000000001000
.......................................................................................................CCT--------GCCTGAATCTTATTGTGTAGA---------------------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTAATATCTTC-TGC.........................................................15140.07100000000100000000
droSec2
TCAACAAGTACGGACCCATCGAGCGCATCCAGATGGTGATTGACGCACAAGTAAGTCGGT-TTTTAATAAGCATTGCT---------------AAGATT-TTTCCT--------GCCTGAATCGTATTGTGTAGA---------------------CAAATCAGC-TGAAGCC--CTGC-AGTTTT--GTCT----TAATT--TCTGGCTAGATAAAATT-----------TGATAGCGATTGTGAGTTTTT--GT-----GTATTCCAAACTAAAAGCTAAAGGCTTGCTTTCACAGTGGCATATTGTTCGA---AGGACATA------------------------------------------TTGATATT------------------------------------------------------TAT----------C-------------------CCGAAATCAATATGTATTCAGTTGT-TAGGAAAAT--------ACAAAC------------------ATAG---ATTAAA-CCTTAATATCTTC-TGACATACAGACACAGCGATCCCGGGGCTTTTGTTTCATTTACTTTGAGAAACTTAGCGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................CCT--------GCCTGAATCGTATTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030030
.....................................................................................................................................................................................................................................................................................GCTAAAGGCTTGCTTTCACAGTGG...........................................................................................................................................................................................................................................................................................................................2412.0021010
.........................................................................................................................................................................................................................................................................................AAGGCTTGCTTTCACAGTGG...........................................................................................................................................................................................................................................................................................................................2012.0020020
.......................................................................................................CCT--------GCCTGAATCGTATTGTGTAGA---------------------CAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000
.....................................................................................................................................GA---------------------CAAATCAGC-TGAAGCC--CT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
...................................................................................................................................................................................................................GATAAAATT-----------TGATAGCGATTGTGAGT................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
.......................................................................................................CCT--------GCCTGAATCGTATTGTGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
.................................................................................................................................................................................................................................................................................................CTTTCACAGTGGCATATTG....................................................................................................................................................................................................................................................................................................................1911.0010010
....................................................................................................................................................................................................................ATAAAATT-----------TGATAGCGATTGTGA..................................................................................................................................................................................................................................................................................................................................................................................2311.0010001
............................................................................................................................................................................................................CTGGCTAGATAAAATT-----------TGATAGCGAT.......................................................................................................................................................................................................................................................................................................................................................................................2611.0011000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGCGATCCCGGGGCT...............................1811.0010010
........................................................................................................CT--------GCCTGAATCGTATTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
.......................................................................................................CCT--------GCCTGAATCGTATTGTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
......................................................................................................TCCT--------GCCTGAATCGTATTGTGTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001
....................................................................................................................................................................................................................................................................................AGCTAAAGGCTTGCTTTCACAGTG............................................................................................................................................................................................................................................................................................................................2411.0011000
.......................................................................................................CCT--------GCCTGAATCGTATTGTGTTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000
..........................................................................................................................................................................................................................................TAGCGATTGTGAGTTTTT--GT-----G..................................................................................................................................................................................................................................................................................................................................................................2111.0010100
..........................................................................................................................................................................................................................................................................CCAAACTAAAAGCTAAAGGCTT........................................................................................................................................................................................................................................................................................................................................2211.0010001
................................................................................................................................................................TCAGC-TGAAGCC--CTGC-AGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
...................................................................................................................................................................................................................................................................................AAGCTAAAGGCTTGCTTTCACAGTG............................................................................................................................................................................................................................................................................................................................2511.0011000
...............................................................................................................................................................ATCAGC-TGAAGCC--CTGC-AGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
..........................................................................................................................................................................................................................................................................................................TGGCATATTGTTCGA---AGGACA......................................................................................................................................................................................................................................................................................................2111.0010100
.......................................................................................................CCT--------GCCTGAATCGTATTGTGTAGA---------------------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000
.............................................................................................................................................................AAATCAGC-TGAAGCC--CTGC-AGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001
.........................................................................................................................................................................................................................ATT-----------TGATAGCGATTGTGAGT................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
droYak3
TCAACAAGTACGGACCCATCGAACGCATCCAGATGGTTATAGACGCACATGTAAGTCGCT-TTATTAAAAGCATTGCT---------------AAGAGA-TTTCCT--------GCCTGAATCCTATTGTGTAGA---------------------CAAATCGGC-TGAAGCC--TTGC-AGTTTT--GTCT----AAAGT--TCTGGCTACATTGAATT-----------TGATAGCGATTGTGAGTTTTT--GT-----GTATTCCAAACTAAAAGCTAAAGGCTTGCTGTCACATTTGCACATTGTTTAT---AGGACATG------------------------------------------TG------------------------------------------------------------GTT----------CTT------------AAGGAAAAAACC----T--------------------------------------------------------TA------TAAA-CCTTTATATCTTT-TCACATACAGACACAGCGTTCCCGGGGCTTCTGTTTCATTTACTTTGAGAATCTCAACGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................................................................GCTAAAGGCTTGCTGTCACATTTG...........................................................................................................................................................................................................................................................................................................................24115.001508200050000
.........ACGGACCCATCGAACGCATCCAGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2518.00800000000008
.......................................................................................................CCT--------GCCTGAATCCTATTGTGTAGA---------------------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.00500100040000
....................................................................................................................................................................................................................................................................................AGCTAAAGGCTTGCTGTCACATTTG...........................................................................................................................................................................................................................................................................................................................2515.00505000000000
.......................................................................................................................................................................................................................................................................................TAAAGGCTTGCTGTCACATTTG...........................................................................................................................................................................................................................................................................................................................2214.00401100020000
........................................................................................................................................................................................................................................................................................AAAGGCTTGCTGTCACATTTG...........................................................................................................................................................................................................................................................................................................................2114.00403000010000
.....................................................................................................................................................................................................................................................................................GCTAAAGGCTTGCTGTCACATTT............................................................................................................................................................................................................................................................................................................................2313.00301100010000
.......................................................................................................CCT--------GCCTGAATCCTATTGTGTAGA---------------------CA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.00300000030000
....................................................................................................................................................................................................................................................................................AGCTAAAGGCTTGCTGTCACATTT............................................................................................................................................................................................................................................................................................................................2412.00202000000000
.......................................................................................................CCT--------GCCTGAATCCTATTGTGTAGA---------------------CAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200100010000
.......................................................................................................CCT--------GCCTGAATCCTATTGTGTAGA---------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200000020000
..........................................................................................................................................................................................................................................................................................AGGCTTGCTGTCACATTTG...........................................................................................................................................................................................................................................................................................................................1912.00200110000000
........................................................................................................CT--------GCCTGAATCCTATTGTGTAGA---------------------CA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200000020000
.......................................................................................................CCT--------GCCTGAATCCTATTGTGTAGA---------------------CAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.00200000020000
.....................................................................................................................................................................................................................................................................................GCTAAAGGCTTGCTGTCAC................................................................................................................................................................................................................................................................................................................................1912.00202000000000
......................................................................................................................................................................................................................................................................................CTAAAGGCTTGCTGTCACATTTG...........................................................................................................................................................................................................................................................................................................................2311.00101000000000
..................................................................................................................................................................................................................................................GTGAGTTTTT--GT-----GTATTCCA...........................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.........................................................................................................................................................................................................................ATT-----------TGATAGCGATTGTGAGT................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
........................................................................................................................................................................................................................................................TTTT--GT-----GTATTCCAAACTAAAAGC.................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
..............................................................................................................................................................................................................................................GATTGTGAGTTTTT--GT-----GTATT..............................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
....................................................................................................................................................................................................................................................................................AGCTAAAGGCTTGCTGTCACATT.............................................................................................................................................................................................................................................................................................................................2311.00100100000000
..................................................................................................................................................................................................................ACATTGAATT-----------TGATAGCGAT.......................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
.......................................................................................................CCT--------GCCTGAATCCTATTGTGTAGA---------------------CAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
...............................................................................................................................................................................................................................................ATTGTGAGTTTTT--GT-----GTATT..............................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.....................................................................................................................................................................................................................................................................................GCTAAAGGCTTGCTGTCACA...............................................................................................................................................................................................................................................................................................................................2011.00100000010000
..............................................................................................................................................................................................................................................GATTGTGAGTTTTT--GT-----GTATTCCAAAC........................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
..............................................................................................................................................................................................................................................GATTGTGAGTTTTT--GT-----GTAT...............................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
........................................................................................................CT--------GCCTGAATCCTATTGTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
..................................................................................................................................................................................................................................................................................AAAGCTAAAGGCTTGCTGTCACATTTG...........................................................................................................................................................................................................................................................................................................................2711.00100000010000
........................................................................................................CT--------GCCTGAATCCTATTGTGTAGA---------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
.......................................................................................................................................................................................................................................................................................TAAAGGCTTGCTGTCACATTT............................................................................................................................................................................................................................................................................................................................2111.00101000000000
...............................................................................................................................................................................................................................................................................CTAAAAGCTAAAGGCTTGCTGTC..................................................................................................................................................................................................................................................................................................................................2311.00100000100000
............................................................................................................................................................................................................................................GCGATTGTGAGTTTTT--GT-----GTATTCCA...........................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
..............................................................................................................................................................................................................................................GATTGTGAGTTTTT--GT-----GTATTCCAAA.........................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
.....................................................................................................................................GA---------------------CAAATCGGC-TGAAGCC--TTGC-AGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
............................................................................................................................................................................C--TTGC-AGTTTT--GTCT----AAAGT--T............................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.........................................................................................................T--------GCCTGAATCCTATTGTGTAGA---------------------CA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.....................................................................................................................................................................................................................................................................................GCTAAAGGCTTGCTGTCACATT.............................................................................................................................................................................................................................................................................................................................2211.00101000000000
..........................................................................................................................................................................................................................TT-----------TGATAGCGATTGTGAGTT...............................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
..............................................................................................................................................................................................................................................GATTGTGAGTTTTT--GT-----GTATTCCA...........................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
............................................................................................................................................................................................................CTGGCTACATTGAATT-----------TGAT.............................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
..............................................................................................................................................................................................................................................GATTGTGAGTTTTT--GT-----GTA................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
.......................................................................................................CCT--------GCCTGAATCCTATTGTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.......................................................................................................CCT--------GCCTGAATCCTATTGTGGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000100000
............................................................................................................................TATTGTGTAGA---------------------CAAATCGGC-..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
..............................................................................................................................................................................................................................................GATTGTGAGTTTTT--GT-----GT.................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
.................................................................................................................................TGTAGA---------------------CAAATCGGC-TGAAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
.............................................................................................................................................................................................................................................CGATTGTGAGTTTTT--GT-----GTAT...............................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
............................................................................................................................................................................................................CTGGCTACATTGAATT-----------TGATA............................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
........................................................................................................................................................................................................................................GATAGCGATTGTGAGTTTT.............................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
.....................................................................................................................................GA---------------------CAAATCGGC-TGAAGCC--TTGC-AGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
................................................................................................................................................................................................................CTACATTGAATT-----------TGATAGCGAT.......................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.........................................................................................................................................................................................................................ATT-----------TGATAGCGATTGTGAGTT...............................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
....................................................................................................................................................................................................................................................GAGTTTTT--GT-----GTATTCCAAACTAAAA...................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
........................................................................................................CT--------GCCTGAATCCTATTGTGTAGA---------------------CAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
..............................................................................................................................................................................................................................................................................ACTAAAAGCTAAAGGCTTGCTGTC..................................................................................................................................................................................................................................................................................................................................2411.00100100000000
.........................................................................................................................................................................................................................................................................................AAGGCTTGCTGTCACATTTGC..........................................................................................................................................................................................................................................................................................................................2111.00100100000000
...............................................................................................................................................................................................................................................................................................................................ACATG------------------------------------------TG------------------------------------------------------------GTT----------CTT------------AAGGAAAA........................................................................................................................................................2111.00101000000000
.......................................................................................................CCT--------GCCTGAATCCTATTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000100000
......................................................................................................................................................................................................................................................................................CTAAAGGCTTGCTGTCACATTT............................................................................................................................................................................................................................................................................................................................2211.00101000000000
.........................................................................................................................................................................................................................................................................................AAGGCTTGCTGTCACATTTG...........................................................................................................................................................................................................................................................................................................................2011.00101000000000
..............................................................................................................................................................................................................................................GATTGTGAGTTTTT--GT-----GTATTCC............................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
droEre2
TCAACAAGTACGGACCCATCGAACGCATCCAGATGGTGATTGACGCACATGTAAGTCGGT-TTTTGATAAGCATTGCT---------------AAGGTATTTTCCT--------GCCTGAATCCCATTGTGTAGA---------------------CAAATCGGC-TGAAGCC--CTGC-AGTTTT--GTCT----CAATT--TCTGGCTAGATAGAATT--------T--AGACAGCGATTGTGAGTTTTT--GT-----GTATTCCAAACTAAAAGCTAAAGGCTTGCTGTCACAGTTGCATATTGTTTGA---AGAACATGTTTTACCAAAAAAAAAAAAAAAATTAAAATAAAATCAAGTT---------------------------------------------------------------GGT----------CT-------------------------------------------------------------------------------------GTAT---ATTAAA-CCTTTATATCTTC-TAACATACAGACTCAGCGTTCCCGGGGCTTCTGTTTCATTTACTTTGAGAATCTCAACGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................................................................................................................................................................GCTAAAGGCTTGCTGTCACAGTTG...........................................................................................................................................................................................................................................................................................................................24114.00149002210
....................................................................................................................................................................................................................................................................................AGCTAAAGGCTTGCTGTCACAGTTG...........................................................................................................................................................................................................................................................................................................................2518.0087001000
.......................................................................................................CCT--------GCCTGAATCCCATTGTGTAGA---------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2417.0071102300
....................................................................................................................................................................................................................................................................................AGCTAAAGGCTTGCTGTCACAGTT............................................................................................................................................................................................................................................................................................................................2416.0066000000
.....................................................................................................................................................................................................................................................................................GCTAAAGGCTTGCTGTCACAGTT............................................................................................................................................................................................................................................................................................................................2315.0054100000
..............................................................................................................................................................................................................GGCTAGATAGAATT--------T--AGACAGCGATT......................................................................................................................................................................................................................................................................................................................................................................................2614.0044000000
..............................................................................................................................................................................................................GGCTAGATAGAATT--------T--AGACAGCGATTG.....................................................................................................................................................................................................................................................................................................................................................................................2713.0033000000
.......................................................................................................CCT--------GCCTGAATCCCATTGTGTAGA---------------------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030102000
........................................................................................................................................................................................................................AATT--------T--AGACAGCGATTGTGAGT................................................................................................................................................................................................................................................................................................................................................................................2212.0021000100
.......................................................................................................CCT--------GCCTGAATCCCATTGTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0022000000
...............................................................................................................................................................................................................................................................................CTAAAAGCTAAAGGCTTGCTGTCACAG..............................................................................................................................................................................................................................................................................................................................2712.0020000020
........................................................................................................................................................................................................................................................................................AAAGGCTTGCTGTCACAGTTG...........................................................................................................................................................................................................................................................................................................................2112.0020001100
..............................................................................................................................................................................................CT----CAATT--TCTGGCTAGATAGAAT.............................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
........................................................................................................................................................................................................................................................................................AAAGGCTTGCTGTCACAGTT............................................................................................................................................................................................................................................................................................................................2011.0010000100
.................................................................................................................................................................................................................TAGATAGAATT--------T--AGACAGC..........................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
..............................................................................................................................................................................................CT----CAATT--TCTGGCTAGATAGAATT--------....................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000
.......................................................................................................................AATCCCATTGTGTAGA---------------------CAAATCGGC-T.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000
......................................................................................................................................................................................................................................................................TATTCCAAACTAAAAGCTAAAGGC..........................................................................................................................................................................................................................................................................................................................................2411.0010100000
........................................................................................................................ATCCCATTGTGTAGA---------------------CAAATCGGC-..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
..................................................................................................................................................................GGC-TGAAGCC--CTGC-AGTTTT--GTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000
...................................................................................................................................................................................................................................................................................AAGCTAAAGGCTTGCTGTCACAGTTG...........................................................................................................................................................................................................................................................................................................................2611.0011000000
.................................................................................................................................................................................................................................................................................AAAAGCTAAAGGCTTGCTGTCACAGTTG...........................................................................................................................................................................................................................................................................................................................2811.0010001000
..................................................................................................................................................................................................................................................................................AAAGCTAAAGGCTTGCTGTCACAGTT............................................................................................................................................................................................................................................................................................................................2611.0011000000
.............................................................................................................................ATTGTGTAGA---------------------CAAATCGGC-TGAAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
..................................................................................................................................................................................................................................................GTGAGTTTTT--GT-----GTATTCCAAACT.......................................................................................................................................................................................................................................................................................................................................................2411.0010001000
......................................................................................................................................................................................................................................................................................CTAAAGGCTTGCTGTCACAGTT............................................................................................................................................................................................................................................................................................................................2211.0010000010
.......................................................................................................................................................................................................TT--TCTGGCTAGATAGAATT--------T--AGACAGC..........................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000
..............................................................................................................................................................AATCGGC-TGAAGCC--CTGC-AGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
..............................................................................................................................................................................................................GGCTAGATAGAATT--------T--AGACAGCGAT.......................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
.......................................................................................................................................................................................................................................................................................TAAAGGCTTGCTGTCACAG..............................................................................................................................................................................................................................................................................................................................1911.0010001000
......................................................................................................................................................................................................................................................................................CTAAAGGCTTGCTGTCACAGTTG...........................................................................................................................................................................................................................................................................................................................2311.0010000100
................................................................................................................................................................................................................................................................................TAAAAGCTAAAGGCTTGCTGTCACAGTT............................................................................................................................................................................................................................................................................................................................2811.0010000010
.......................................................................................................................................................................................................................................................................................TAAAGGCTTGCTGTCACAGTT............................................................................................................................................................................................................................................................................................................................2111.0010000010
............................................................................................................................................................................................................................................................................AAACTAAAAGCTAAAGGCTTGCTGC...................................................................................................................................................................................................................................................................................................................................2511.0010100000
..........................................................................................................................................................................................................................................................................................AGGCTTGCTGTCACAGTTG...........................................................................................................................................................................................................................................................................................................................1911.0011000000
............................................................................................................................................................................................................................................................................AAACTAAAAGCTAAAGGCTTGCTGT...................................................................................................................................................................................................................................................................................................................................2511.0010100000
.......................................................................................................................................................................................................................................................................................................CAGTTGCATATTGTTTGA---AGAAC.......................................................................................................................................................................................................................................................................................................2311.0010100000
..............................................................................................................................................................................................................................................GATTGTGAGTTTTT--GT-----GTATTCCAAA.........................................................................................................................................................................................................................................................................................................................................................2611.0010000010
...................................................................................................................................................................................................................GATAGAATT--------T--AGACAGCGATTGTGAGT................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
...................................................................................................................................................................................................................GATAGAATT--------T--AGACAGCGATTGT....................................................................................................................................................................................................................................................................................................................................................................................2311.0010001000
..............................................................................................................................................................................................CT----CAATT--TCTGGCTAGATA.................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000
..............................................................................................................................................................................................................................................................................ACTAAAAGCTAAAGGCTTGCTGTCACA...............................................................................................................................................................................................................................................................................................................................2711.0010000010
..............................................................................................................................................................................................................................................................................................TTGCTGTCACAGTTG...........................................................................................................................................................................................................................................................................................................................1541.0040000004
.............................................................................................................................................................................................................TGGCTAGATAGAATT--------T--AGACAGCGATTG.....................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
........................................................................................................CT--------GCCTGAATCCCATTGTGTAGA---------------------CAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000
......................................................................................................................GAATCCCATTGTGTAGA---------------------CAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
.................................................................................................................................................................................................................................................................................AAAAGCTAAAGGCTTGCTGTCACAGTT............................................................................................................................................................................................................................................................................................................................2711.0010000010
.........ACGGACCCATCGAACGCATCCAGATGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
...............................................................................................................................................................................................................GCTAGATAGAATT--------T--AGACAGCGATTG.....................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
.......................................................................................................CCT--------GCCTGAATCCCATTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
....................................................................................................................................................................................................................................................................................AGCTAAAGGCTTGCTGTCACAGTTGC..........................................................................................................................................................................................................................................................................................................................2611.0010100000
............................................................................................................................................................................................................CTGGCTAGATAGAATT--------T--AGACAGCGATT......................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000

Generated: 06/08/2015 at 03:42 PM