ID:

dpe_1067

 Coordinate:

scaffold_2:4947678-4947828 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.2 -7.7

Flybase annnotation

exon [dper_GLEANR_10791:4]; CDS [Dper\GL10669-cds]; intron [Dper\GL10669-in]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+
AT_richLow_complexityLow_complexity+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ACGTTCTCGTTCACGTTTAGCATTTGAAATTTGAAATTTTCGCCCTTCAGCCTTTTGTAATCGTAAGCAAACCTTGATATTGGATCAAATCTAATCACGGCCAATAAAATGAAGAGTAAAGGGATGTGTTGTTTATAGAAAACTGTTTATTCTAATAATATATATTATGTATATATAATAATATTTACCATTTTTTTAAAGCGCTTCCAATTGCCCAACCTGAAGGATTTCGACAAGTGGGGCAATCGCGT
*******************************************************...........(((..((((..((((((.((............))))))))............))))..)))......********************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V111
male body		 M021
embryo
 V042
embryo
 V057
head
.......................................................TGTAATCGTAAGCAAACCTTGATAT........................................................................................................................................................................... 25 0 1 113.00 113 113 0 0 0 0
.......................................................TGTAATCGTAAGCAAACCTTGATA............................................................................................................................................................................ 24 0 1 71.00 71 70 1 0 0 0
............................................................................................................................................................................................................................TGAAGGATTTCGACAAGTGGG.......... 21 0 1 40.00 40 35 1 0 4 0
............................................................................................................................................................................................................................TGAAGGATTTCGACAAGTGG........... 20 0 1 34.00 34 34 0 0 0 0
............................................................................................................................................................................................................................TGAAGGATTTCGACAAGTGGGG......... 22 0 1 28.00 28 22 3 0 3 0
...................................................................................................................................................................................................................TGCCCAACCTGAAGGATTTCGACAAG.............. 26 0 1 27.00 27 23 0 3 1 0
............................................................................................................................................................................................................................TGAAGGATTTCGACAAGTGGGGC........ 23 0 1 26.00 26 19 6 1 0 0
.....................................................................................................................................................................................TATTTACCATTTTTTTAAAGCGCTT............................................. 25 0 1 25.00 25 25 0 0 0 0
.............................................................................................................TGAAGAGTAAAGGGATGTGTTGTT...................................................................................................................... 24 0 1 18.00 18 17 0 0 1 0
..................................................................................................................................................................................................................TTGCCCAACCTGAAGGATTTCGACAAG.............. 27 0 1 15.00 15 6 0 8 1 0
.....................................................................................................................................................................................TATTTACCATTTTTTTAAAGCGCTTC............................................ 26 0 1 12.00 12 12 0 0 0 0
.............................................................................................................TGAAGAGTAAAGGGATGTGTTGT....................................................................................................................... 23 0 1 8.00 8 7 1 0 0 0
............................................................................................................................................................................................................................TGAAGGATTTCGACAAGTGGGGCAA...... 25 0 1 8.00 8 7 1 0 0 0
.............................................................................................................TGAAGAGTAAAGGGATGTGTTG........................................................................................................................ 22 0 2 7.50 15 11 4 0 0 0
...................................................................................................................................................................................................................TGCCCAACCTGAAGGATTTCGACAAGT............. 27 0 1 7.00 7 7 0 0 0 0
............................................................................................................................................................................................................................TGAAGGATTTCGACAAGTG............ 19 0 1 7.00 7 7 0 0 0 0
.............................................................................................................TGAAGAGTAAAGGGATGTGTTGTTTA.................................................................................................................... 26 0 1 7.00 7 7 0 0 0 0
.....................................................................................................................................................................................TATTTACCATTTTTTTAAAGCGCTTCCAA......................................... 29 0 1 6.00 6 5 0 0 1 0
..............................................................................................................GAAGAGTAAAGGGATGTGTTGTT...................................................................................................................... 23 0 1 6.00 6 6 0 0 0 0
.....................................................................................................................................................................................TATTTACCATTTTTTTAAAGCGCT.............................................. 24 0 1 6.00 6 6 0 0 0 0
.............................................................................................................................................................................................................................GAAGGATTTCGACAAGTGG........... 19 0 1 6.00 6 6 0 0 0 0
....................................................................................................................TAAAGGGATGTGTTGTTTATAGAAAAC............................................................................................................ 27 0 1 6.00 6 4 2 0 0 0
.....................................................................................................................................................................................................................................TCGACAAGTGGGGCAATCGCGT 22 0 1 6.00 6 5 1 0 0 0
.............................................................................................................TGAAGAGTAAAGGGATGTGTTGTTT..................................................................................................................... 25 0 1 6.00 6 6 0 0 0 0
......................................................TTGTAATCGTAAGCAAACCTTGATA............................................................................................................................................................................ 25 0 1 5.00 5 4 0 0 0 1
.......................................................TGTAATCGGAAGCAAACCTTGATAT........................................................................................................................................................................... 25 1 1 5.00 5 5 0 0 0 0
..................................................................................................................................................................................................................TTGCCCAACCTGAAGGATTTCGACA................ 25 0 1 5.00 5 5 0 0 0 0
....................................................TTTTGTAATCGTAAGCAAACCTTGA.............................................................................................................................................................................. 25 0 1 5.00 5 5 0 0 0 0
.......................................................TGTAATCGGAAGCAAACCTTGATA............................................................................................................................................................................ 24 1 1 5.00 5 5 0 0 0 0
........................................................GTAATCGTAAGCAAACCTTGATAT........................................................................................................................................................................... 24 0 1 5.00 5 5 0 0 0 0
..............................................TCAGCCTTTTGTAATCGTAAGCAAACCT................................................................................................................................................................................. 28 0 1 4.00 4 4 0 0 0 0
...................................................................................................................................................................................................................TGCCCAACCTGAAGGATTTCGACAAGTG............ 28 0 1 4.00 4 4 0 0 0 0
............................................................................................................................................................................................................................TGAAGGATTTCGACAAGTGGGGCAAT..... 26 0 1 4.00 4 4 0 0 0 0
.......................................................TGTAATCGTAAGCAAACCTTGAT............................................................................................................................................................................. 23 0 1 4.00 4 1 3 0 0 0
..................................................................................................................................................................................................................TTGCCCAACCTGAAGGATTTCGACAA............... 26 0 1 4.00 4 4 0 0 0 0
..................................................................................................................................................................................................................TTGCCCAACCTGAAGGATTTCGA.................. 23 0 1 4.00 4 4 0 0 0 0
.....................................................................................................................................................................................................................................TCGACAAGTGGGGCAATCGC.. 20 0 1 3.00 3 3 0 0 0 0
.............................................................................................................................................................................................................TCCAATTGCCCAACCTGAAGGATTTCGA.................. 28 0 1 3.00 3 3 0 0 0 0
.......................................................TGTAATCGTAAGCAAACCTTGATATT.......................................................................................................................................................................... 26 0 1 3.00 3 3 0 0 0 0
.............................................................................................................................................................................................................................GAAGGATTTCGACAAGTGGGG......... 21 0 1 3.00 3 3 0 0 0 0
..................................................................................................................................................................................................................TTGCCCAACCTGAAGGATTTCGACAAGT............. 28 0 1 3.00 3 3 0 0 0 0
.......................................................................................................................................................................................................................CAACCTGAAGGATTTCGACAAGTGGGGC........ 28 0 1 2.00 2 0 0 2 0 0
...............................................................................TTGGATCAAATCTAATCACGGCCAA................................................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0
........................................................GTAATCGTAAGCAAACCTTGATA............................................................................................................................................................................ 23 0 1 2.00 2 2 0 0 0 0
.................TAGCATTTGAAATTTGAAATTTTCG................................................................................................................................................................................................................. 25 0 2 2.00 4 3 0 0 1 0
....................................................................................................................................................................................................................GCCCAACCTGAAGGATTTCGACAAG.............. 25 0 1 2.00 2 2 0 0 0 0
.........................................................TAATCGTAAGCAAACCTTGATATTGGAT...................................................................................................................................................................... 28 0 1 2.00 2 1 0 1 0 0
.....................................................................................................................................................................................................................................TCGACAAGTGGGGCAATCG... 19 0 1 2.00 2 2 0 0 0 0
........................................................................................................................................AGAAAACTGTTTATTCTAATAATA........................................................................................... 24 0 1 2.00 2 2 0 0 0 0
.......................................................................................................................................................................................................................CAACCTGAAGGATTTCGACAAGTGGGG......... 27 0 1 2.00 2 2 0 0 0 0
.........................................................................................................................................................................................................................ACCTGAAGGATTTCGACAAGTGGGG......... 25 0 1 2.00 2 2 0 0 0 0
..................................................................................................................................................................................................................................ATTTCGACAAGTGGGGCAATCGCGT 25 0 1 2.00 2 2 0 0 0 0
....................................................................................TCAAATCTAATCACGGCCAATAAAAT............................................................................................................................................. 26 0 1 2.00 2 2 0 0 0 0
.........................................................TAATCGTAAGCAAACCTTGATAT........................................................................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0
.....................................................................................................................................................................................................................................TCGACAAGTGGGGCAATCGCG. 21 0 1 2.00 2 2 0 0 0 0
.........................................................................................................................................................................................................................ACCTGAAGGATTTCGACAAGTGGGGC........ 26 0 1 2.00 2 2 0 0 0 0
....................................................................................TCAAATCTAACCACGGCCAATAAAAG............................................................................................................................................. 26 2 1 2.00 2 2 0 0 0 0
.......................................................................................................................................................................................................................CAACCTGAAGGATTTCGACAAGTGGG.......... 26 0 1 2.00 2 2 0 0 0 0
.....................................................................................................................................................................................................................CCCAACCTGAAGGATTTCGACAAGTG............ 26 0 1 2.00 2 2 0 0 0 0
.......................................................GGTAATCGTAAGCAAACCTTGATA............................................................................................................................................................................ 24 1 1 2.00 2 2 0 0 0 0
.................................................................................................................................................................................................TTTTAAAGCGCTTCCAATTGCCCAACCT.............................. 28 0 1 2.00 2 2 0 0 0 0
............................................................................................................................................................................................................................TGAAGGATTTCGACAAGTGGGGCA....... 24 0 1 2.00 2 1 1 0 0 0
..............................................................................................................GAAGAGTAAAGGGATGTGTTGTTTA.................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0
........................................................................................................................................................................................................................AACCTGAAGGATTTCGACAAGTGGGGC........ 27 0 1 2.00 2 2 0 0 0 0
.......................................................................................................................................................................................................................CAACCTGAAGGATTTCGACAAGTGGGGCT....... 29 1 1 2.00 2 0 0 2 0 0
................................................................................TGGATCAAATCTAACCACGGCCAATA................................................................................................................................................. 26 1 1 2.00 2 2 0 0 0 0
............................................................................................................................................................................................................................TGAAGGATGTCGACAAGTGG........... 20 1 1 2.00 2 2 0 0 0 0
.........................................................................TTGATATTGGATCAAATCTAATCACGG....................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0
..........................................................................................................................................................................................................................CCTGAAGGATTTCGACAAGTG............ 21 0 1 2.00 2 2 0 0 0 0
.................TAGCATTTGAAATTTGAAATTTTCGCCC.............................................................................................................................................................................................................. 28 0 2 2.00 4 4 0 0 0 0
...........................................................................................................................................................................................................................CTGAAGGATTTCGACAAGTGG........... 21 0 1 2.00 2 2 0 0 0 0
.................................................................................................................................................................................................TTTTAAAGCGCTTCCAATTGCCCAACC............................... 27 0 1 2.00 2 2 0 0 0 0
....................................................................................................................................................................................................TAAAGCGCTTCCAATTGCCCAACCT.............................. 25 0 1 2.00 2 2 0 0 0 0
.............................................................................................................................................................................................................................GAAGGATTTCGACAAGTGGGGCAA...... 24 0 1 2.00 2 2 0 0 0 0
................................................................................TGGATCAAATCTAATCACGGCC..................................................................................................................................................... 22 0 1 2.00 2 2 0 0 0 0
........................................................................................................TAAAATGAAGAGTAAAGGG................................................................................................................................ 19 0 2 1.50 3 1 2 0 0 0
....TCTCGTTCACGTTTAGCATTTGAAA.............................................................................................................................................................................................................................. 25 0 2 1.50 3 3 0 0 0 0
.............................................................................................................TGAAGAGTAAAGGGATGTGTT......................................................................................................................... 21 0 2 1.50 3 2 1 0 0 0
.................TAGCATTTGAAATTTGAAATTTTCGCCCT............................................................................................................................................................................................................. 29 0 2 1.50 3 3 0 0 0 0
...............................................................................TTGGATCAAATCTAACCACGGC...................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................................TGCCCAACATGAAGGATTTCGACAAGT............. 27 1 1 1.00 1 1 0 0 0 0
.............................TTTGAAATTTTCGCCCTTCAGCC....................................................................................................................................................................................................... 23 0 2 1.00 2 2 0 0 0 0
...................................................................................................................................................................................................TTAAAGCGCTTCCAATTGCCCAACC............................... 25 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................TTTACCATTTTTTTAAAGCGCTT............................................. 23 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................................GAAGGATTTCGACAAGTGGGGCAATCG... 27 0 1 1.00 1 1 0 0 0 0
....................................................................................................................TAAAGGGAGGTGTTGTTTATAGAAA.............................................................................................................. 25 1 1 1.00 1 1 0 0 0 0
................................................................AAGCAAACCTTGATATTGGATT..................................................................................................................................................................... 22 1 1 1.00 1 0 0 1 0 0
.........................................................................................................................................................................................................CGCTTCCAATTGCCCAACCTGAAGGATT...................... 28 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................................ATTGCCCAACCTGAAGGATTTCGACA................ 26 0 1 1.00 1 1 0 0 0 0
....TCTCGTTCACGTTTAGCATTTGAAATT............................................................................................................................................................................................................................ 27 0 2 1.00 2 2 0 0 0 0
.........................................................................................................................................................................................................................ACCTGAAGGATTTCGACAAGTGGGGCA....... 27 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................................TGAAGGATTTCGACAAGTGGGA......... 22 1 1 1.00 1 1 0 0 0 0
.....................................................................................................................AAAGGGATGTGTTGTTTATAGAAAAC............................................................................................................ 26 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................................................AACCTGAAGGATTTCGACAAGTGG........... 24 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................................TGCCCAACGTGAAGGATTTCGACAA............... 25 1 1 1.00 1 1 0 0 0 0
..............................................................................................................GAAGAGTAAAGGGATGTGTTGTTTATA.................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0
....................................................................................................................TAAAGGGATGTGTTGTTTATAGAA............................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................................................TTTCGACAAGTGGGGCAATCGCGA 24 1 1 1.00 1 1 0 0 0 0
.........................................................................................................................................GAAAACTGGTTATTCTAATAATATATAT...................................................................................... 28 1 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................................TTGCCCAACCTGAAGGATTTCG................... 22 0 1 1.00 1 1 0 0 0 0
................................................................................TGGATCAAATCTAATCACGG....................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
................................................................AAGCAAACCTTGATATTGGATCAAA.................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................................TGCCCAACGTGAAGGATTTCGACA................ 24 1 1 1.00 1 1 0 0 0 0
...............................................................................................................................................TGTTTATTCTAATAATATA......................................................................................... 19 0 1 1.00 1 1 0 0 0 0
......................................................................................................................................................................................ATTTACCATTTTTTTAAAGCGCT.............................................. 23 0 1 1.00 1 1 0 0 0 0
..............................................................................................................GAAGAGTAAAGGGATGTGTTGTTA..................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0
...............................................................................................................AAGAGTAAAGGGATGTGTTGT....................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
....................................................................................................................TAAAGGGAGGTGTTGTTTATAGAAAAC............................................................................................................ 27 1 1 1.00 1 1 0 0 0 0
.........................................................................................ACTAATCACGGCCAATAAAATGAAGAGT...................................................................................................................................... 28 1 1 1.00 1 1 0 0 0 0
..........................................................................................CTAATCACGGCCAATAAAATGAAGAG....................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
......................................................TTGTAATCGTAAGCAAACCTTGAT............................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0
..............................................................................................................GAAGAGTAAAGGGATGTGTTG........................................................................................................................ 21 0 2 1.00 2 2 0 0 0 0
.....................................................................................................................................................................................................................................TCGACAAGTGGGGCAATC.... 18 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................................................................ACCTGAAGGATTTCGACAAGTGGG.......... 24 0 1 1.00 1 0 1 0 0 0
.....................................................................................CAAATCTAATCACGGCCAATAAAAT............................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0
.......................................................TGTAATCGAAAGCAAACCTTGATA............................................................................................................................................................................ 24 1 1 1.00 1 1 0 0 0 0
..........................................................................................................AAATGAAGAGTAAAGGGATGTGTTGT....................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................................TTAAGGATTTCGACAAGTGGG.......... 21 1 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................................GAAGGATTTCGACAAGTGGGGCAATA.... 26 1 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................................................AAGGATTTCGACAAGTGGG.......... 19 0 1 1.00 1 1 0 0 0 0
.............................................................................................................TGAAGAGTAGAGGGATGTGTTGT....................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0
....................................................................................................................TAAAGGGATGTGTTGTTTATAGAAAA............................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
.......................................................TGTAATCGTAAGCAAACCTTGATATTG......................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................................................AAGGATTTCGACAAGTGG........... 18 0 1 1.00 1 1 0 0 0 0
................................................................................TGGATCAAATCTAACCACGGCCA.................................................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0
....................................................................................................................TAAAGGGATGTGTTGTTTATA.................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
.............................................................................................................TGAAGAGTAAAGGGATGTGT.......................................................................................................................... 20 0 2 1.00 2 0 2 0 0 0
...............................................................................................................................................................................................TTTTTTAAAGCGCTTCCAATTGCCCAACC............................... 29 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................................TGAAGGATGTCGACAAGTGGG.......... 21 1 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................TATTTACCTTTTTTTTAAAGCGCT.............................................. 24 1 1 1.00 1 1 0 0 0 0
....................................................................................................................................................................................................................................TTCGACAAGTGGGGCAATCGAAA 23 3 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................................GAAGGATTCCGACAAGTGGGGCAATCG... 27 1 1 1.00 1 1 0 0 0 0
....................................................TTTTGTAATCGTAAGCAAACCTTGATA............................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................................................................................TAAAGCGCTTCCAATTGCCCAACCTGA............................ 27 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................................GAAGGATTTCGACAAGTGGG.......... 20 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................................................................................TAAAGCGCTTCCAATTGCCCAACCTG............................. 26 0 1 1.00 1 1 0 0 0 0
........................................................................................................TAAAATGAAGAGTAAAGGGATGTG........................................................................................................................... 24 0 2 1.00 2 1 1 0 0 0
................................................................................TGGATCAAATCTAATCACGGCCAATAA................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0
.............................................TTCAGCCTTTTGTAATCGTAAGCAAACC.................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................................................................................................GCCCAACCTGAAGGATTTCGACAAGT............. 26 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................................TGCCCAACCTGAAGGATTTCGACA................ 24 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................TCCAATTGGCCAACCTGAAGGATTTCGA.................. 28 1 1 1.00 1 1 0 0 0 0
...............................................................................TTGGATCAAATCTAATCACGGCCAATA................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................................GAAGGATTTCGACAAGTG............ 18 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................GATGTGTTGTTTATAGAAAACTGTTA....................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
....................................................................................................................................................................................................................................TTCGACAAGTGGGGCAATCGCGT 23 0 1 1.00 1 1 0 0 0 0
.....................................................TTTGTAATCGTAAGCAAACCTTGATA............................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................................TGAAGGATGTCGACAAGTGGGGC........ 23 1 1 1.00 1 1 0 0 0 0
................................................................................TGGATCAAATCTAATCACGGCCAATAAA............................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
............................................................TCGTAAGCAAACCTTGATATTGGA....................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................TTAAAGCGCTTCCAATTGCCCAACCTG............................. 27 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................................................AACCTGAAGGATTTCGACAAGTGGG.......... 25 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................TATTTACCATTTTTTTAAAGCTCTT............................................. 25 1 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................................CAATTGCCCAACCTGAAGGATTTCG................... 25 0 1 1.00 1 1 0 0 0 0
...............................................................................................................AAGAGTAAAGGGATGTGTTGTTTATA.................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................................................AACCTGAAGGATTTCGACAAGTAGGG......... 26 1 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................................TGAAGGATCTCGACAAGTGGG.......... 21 1 1 1.00 1 1 0 0 0 0
.......................................................GGTAATCGTAAGCAAACCTTGATAT........................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
..............................................................................................................GAAGAGTAAAGGGATGTGTTGTTT..................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................................TGAAGGATTTCGGCAAGTGGGGCA....... 24 1 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................................................GATTTCGACAAGTGGGGCAATCG... 23 0 1 1.00 1 1 0 0 0 0
....................................................................................TCAAATCTGATCACGGCCAATAAAAT............................................................................................................................................. 26 1 1 1.00 1 1 0 0 0 0
................................................................................TGGATCAAATCTAATCACGGCCAATA................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................AAAGGGATGTGTTGTTTATAGAA............................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
................................................................................TGGATCAACTCTAACCACGGCCAATA................................................................................................................................................. 26 2 1 1.00 1 1 0 0 0 0
.....................................................TTTGTAATCGTAAGCAAACCTTGATAT........................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
.........................................................TAATCGTAAGCAAACCTTGATATTGGA....................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................................CCTGAAGGATTTCGACAAGTGGGG......... 24 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................................TGAAGGATTTCGACAGGTGGG.......... 21 1 1 1.00 1 0 1 0 0 0
........................................................................................................................................................................................................................AACCTGAAGGATTTCGACAAGTGGGGCA....... 28 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................................TGAAGGATTTCGACAAGTGGGGCAATC.... 27 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................................TGCCCAACCTGAAGGATTTCGACAGG.............. 26 1 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................................GGAAGGATTTCGACAAGTGGGGCAAT..... 26 1 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................................TTGCCCAACCTGAAGGATTTCGAC................. 24 0 1 1.00 1 1 0 0 0 0
....................................................................................................................TAAAGGGATGTGTTGTTTATAGA................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0
.............................................TTCAGCCTTTTGTAATCGTAAGCAAACCT................................................................................................................................................................................. 29 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................................GAAGGATTTCGACAAGTGGGGC........ 22 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................................................AAGGATTTCGACAAGTGGGGCAA...... 23 0 1 1.00 1 1 0 0 0 0
.......................................................TGTAATCGTAAGCAAACCTTCATA............................................................................................................................................................................ 24 1 1 1.00 1 1 0 0 0 0
............................................................TCGTAAGCAAACCTTGATATTGGATC..................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
..............................................................................................................GAAGAGTAAAGGGATGTGTTGTA...................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0
............................................................................................AATCACGGCCAATAAAATGAAGAGTA..................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................................TTGCCCAAACTGAAGGATTTCGACAAG.............. 27 1 1 1.00 1 1 0 0 0 0
.............................TTTGAAATTTTCGCCCTTCAGC........................................................................................................................................................................................................ 22 0 2 1.00 2 2 0 0 0 0
..........................................................................................................................................................................................................................CCTGAAGGATTTCGACAAGTGGGGC........ 25 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................TCCAATTGCCCAACCTGAAGGATT...................... 24 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................................................TCGACAAGTGGGGCAATCGCGC 22 1 1 1.00 1 1 0 0 0 0
.........................................................................................TCTAATCACGGCCAATAAAATGAAGAG....................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0
.............................................................................................................TGAAGAGTTAAGGGATGTGTTGTTT..................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................................TGAAGGATCTCGACAAGTGGGG......... 22 1 1 1.00 1 1 0 0 0 0
...............................................................TAAGCAAACCTTGATATTGGATCAAAT................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................................GAAGGATTTCGACAAGTGGGA......... 21 1 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................................TTGCCCAACCTGGAGGATTTCGACAAG.............. 27 1 1 1.00 1 1 0 0 0 0
............................................................TCGTAAGCAAACCTTGATATTGGAT...................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
......................................................................................AAATCTAACCACGGCCAATAAAAG............................................................................................................................................. 24 2 1 1.00 1 1 0 0 0 0
.....................................................................................................................................TATAGAAAACTGTTTATTCTAATA.............................................................................................. 24 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................................AGAAGGATTTCGACAAGTGGGGCAAT..... 26 1 1 1.00 1 1 0 0 0 0
.....................................................................................................................AAAGGGATGTGTTGTTTATAGA................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0
.......................................................TGTAATCGTAAGCAAACCTTGATAA........................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
..............................................................................................................GAAGAGTAGAGGGATGTGTTGTTTATA.................................................................................................................. 27 1 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................................TGAAGGATTTCGACAAGTGGA.......... 21 1 1 1.00 1 1 0 0 0 0
......................................................................................................................................................................................ATTTACCATTTTTTTAAAGCGCTT............................................. 24 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................................................CAACCTGAAGGATTTCGA.................. 18 0 1 1.00 1 1 0 0 0 0
......................................................................................AAATCTAACCACGGCCAATAAAAGT............................................................................................................................................ 25 3 1 1.00 1 1 0 0 0 0
.......................................................TGTAATCGAAAGCAAACCTTGATAT........................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
...........................................................................................TAATCACGGCCAATAAAATGAAGAG....................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0
...........................................................................................TAATCACGGCCAATAAAATGAAGAGT...................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
....................................................................................................................TAAAGGGATGTGTTGTTTATAG................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................................TTGCCCAACCTGAAGGATTTCGACAAA.............. 27 1 1 1.00 1 1 0 0 0 0
...............................................................................TTGGATCAAATCTAATCACGGC...................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................................TCCCCAACCTGAAGGATTTCGACAAG.............. 26 1 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................................................AAGGATTTCGACAAGTGGGGC........ 21 0 1 1.00 1 1 0 0 0 0
...............................................................................................................AAGAGTAAAGGGATGTGTTGTT...................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
....................................................................................................................TAAAGGGATGTGTTGTTTATAGAAA.............................................................................................................. 25 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................................TGAAGGATTTCGACAAGTGGAG......... 22 1 1 1.00 1 0 0 0 1 0
......................................................................................................................................................................................................................................CGACAAGTGGGGCAATCGC.. 19 0 2 0.50 1 1 0 0 0 0
....................CATTTGAAATTTGAAATTTTCGCCC.............................................................................................................................................................................................................. 25 0 2 0.50 1 1 0 0 0 0
.......................................................TGTAATCGTAAGCAAACCTTG............................................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0
.............................................................................................................TGAAGAGTGAAGGGATGTGTTGTT...................................................................................................................... 24 1 2 0.50 1 1 0 0 0 0
.............................................................................................................TGAAGAGTAAAGGGATGTG........................................................................................................................... 19 0 2 0.50 1 1 0 0 0 0
............ACGTTTAGCATTTGAAATTTGAAAT...................................................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
...............................TGAAATTTTCGCCCTTCAGCCTTTTG.................................................................................................................................................................................................. 26 0 2 0.50 1 1 0 0 0 0
.............................TTTGAAATTTTCGCCCTTCAGCCT...................................................................................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0
........................................................................................................TAAAATGAAGAGTAAAGGGATGT............................................................................................................................ 23 0 2 0.50 1 1 0 0 0 0
................TTAGCATTTGAAATTTGAAATTT.................................................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
.......................................................TGTAATCGTAAGCAAACCT................................................................................................................................................................................. 19 0 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................................................................GCCCAACCTGAAGGATTT..................... 18 0 2 0.50 1 1 0 0 0 0
.............................................................................................................TGAAGAGTGAAGGGATGTGTTGT....................................................................................................................... 23 1 2 0.50 1 1 0 0 0 0
................TTAGCATTTGAAATTTGAAATTTTCGCC............................................................................................................................................................................................................... 28 0 2 0.50 1 1 0 0 0 0
.................TAACATTTGAAATTTGAAATTTTCG................................................................................................................................................................................................................. 25 1 2 0.50 1 1 0 0 0 0
................GTAGCATTTGAAATTTGAAATTTTCG................................................................................................................................................................................................................. 26 1 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................................................TAAAGCGCTTCCAATTGCA.................................... 19 1 2 0.50 1 1 0 0 0 0
.....................................TTTCGCCCTTCAGCCCTTTGTAATC............................................................................................................................................................................................. 25 1 2 0.50 1 1 0 0 0 0
...............................................................................................................................................................................................TTTTTTAAAGCGCTTCCAAT........................................ 20 0 2 0.50 1 1 0 0 0 0
.............................TTTGAAATTTTCGCCCTTCAGCCTTTTG.................................................................................................................................................................................................. 28 0 2 0.50 1 1 0 0 0 0
........................................................................................................TAAAATGAAGAGTAAAGGGAT.............................................................................................................................. 21 0 2 0.50 1 0 0 1 0 0
....TCTCGTTCACGTTTAGCATTTGA................................................................................................................................................................................................................................ 23 0 2 0.50 1 1 0 0 0 0
..................AGCATTTGAAATTTGAAATTTTCG................................................................................................................................................................................................................. 24 0 2 0.50 1 1 0 0 0 0
........................TGAAATTTGAAATTTTCGCCCTTCAGCC....................................................................................................................................................................................................... 28 0 2 0.50 1 1 0 0 0 0
...............................TGAAATTTTCGCCCTTCAGCCT...................................................................................................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0
.....CTCGTTCACGTTTAGCATTTGAAA.............................................................................................................................................................................................................................. 24 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................................................................................TTTTAAAGCGCTTCCAATTGC..................................... 21 0 2 0.50 1 1 0 0 0 0
.................TAGCATTTGAAATTTGAAATTTTCGCC............................................................................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0
.............................TTTGAAATTTTCGCCCTTCAGCCTTT.................................................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0
.............................................................................................................TGAAGAGTGAAGGGATGTGTTG........................................................................................................................ 22 1 3 0.33 1 1 0 0 0 0
..................................................................................................................AGTACATGGATGTGTTGT....................................................................................................................... 18 2 15 0.07 1 0 0 0 1 0
...........................................................................................................................................................................................................................CTGAAGGAACTCGACAAG.............. 18 2 16 0.06 1 1 0 0 0 0
................................................................................................................ATTGTAAGGGGATGTGTTGT....................................................................................................................... 20 3 17 0.06 1 0 0 0 1 0

Anti-sense strand reads

TGCAAGAGCAAGTGCAAATCGTAAACTTTAAACTTTAAAAGCGGGAAGTCGGAAAACATTAGCATTCGTTTGGAACTATAACCTAGTTTAGATTAGTGCCGGTTATTTTACTTCTCATTTCCCTACACAACAAATATCTTTTGACAAATAAGATTATTATATATAATACATATATATTATTATAAATGGTAAAAAAATTTCGCGAAGGTTAACGGGTTGGACTTCCTAAAGCTGTTCACCCCGTTAGCGCA
**********************************************************************************************************************...........(((..((((..((((((.((............))))))))............))))..)))......******************************************************* 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V111
male body		 M021
embryo
 V042
embryo
 V050
head
 V057
head
.........................................CGGGAAGTCGGAAAACATTAGCAT.......................................................................................................................................................................................... 24 0 2 14.50 29 22 3 2 1 1 0
...........................................GGAAGTCGGAAAACATTAGCAT.......................................................................................................................................................................................... 22 0 2 13.00 26 24 1 0 1 0 0
..........................................GGGAAGTCGGAAAACATTAGCAT.......................................................................................................................................................................................... 23 0 2 10.50 21 17 3 0 1 0 0
........................................GCGGGAAGTCGGAAAACATTAGCAT.......................................................................................................................................................................................... 25 0 2 2.50 5 4 1 0 0 0 0
.GCAAGAGCAAGTGCAAATCGTAAACT................................................................................................................................................................................................................................ 26 0 2 2.50 5 4 1 0 0 0 0
..............................................................................................................................................................................................................GGTTAACGGGTTGGACTTCCTAAA..................... 24 0 1 2.00 2 2 0 0 0 0 0
...............................................................................................................................................................................................................GTTAACGGGTTGGACTTCCTAAA..................... 23 0 1 2.00 2 2 0 0 0 0 0
..............................................................................................AGTGCCGGTTATTTTACTTCTCATT.................................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0
.......................................AGCGGGAAGTCGGAAAACATTAGCAT.......................................................................................................................................................................................... 26 0 2 1.50 3 3 0 0 0 0 0
............................................GAAGTCGGAAAACATTAGCAT.......................................................................................................................................................................................... 21 0 2 1.50 3 3 0 0 0 0 0
.........................................................................................................................................................................................................TCGAAGGTTAACGGGATGGACTTC.......................... 24 2 1 1.00 1 1 0 0 0 0 0
.GCAAGAGCAAGTGCAAATCGTAAACTT............................................................................................................................................................................................................................... 27 0 2 1.00 2 2 0 0 0 0 0
................................................................................................TGCCGGTTATTTTACTTCTCATT.................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
..................................................................................CTAGTTTAGATTGGTGCCGGTT................................................................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0
..................................................................................CTAGTTTAGATTAGTGCCGGT.................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
.................................................................TCGTTTGGAACTATAACCTAG..................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0
......................................................................................................................................................................................................TTCGCGAAGGTTAACGGGTTGGACT............................ 25 0 1 1.00 1 1 0 0 0 0 0
............................................................................................................................................................................................................AAGGTTAACGGGTTGGACTTCCTAAA..................... 26 0 1 1.00 1 1 0 0 0 0 0
..................................................................................CTAGTTTAGATTGGTGCCGGTTA.................................................................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0
.......................................................................GGAACTATAACCTAGTTTAGA............................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................................................................................................GCGAAGGTTAACGGGTTGGACTTCCT........................ 26 0 1 1.00 1 1 0 0 0 0 0
.........................................CGGGAAGTCGGAAAACATTAGCA........................................................................................................................................................................................... 23 0 2 1.00 2 2 0 0 0 0 0
...........................................GGTAGTCGGAAAACATTAGCAT.......................................................................................................................................................................................... 22 1 2 1.00 2 2 0 0 0 0 0
...............................................................................................GTGCCGGTTATTTTAGTTCTCATT.................................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................................................................................................CGGGTTGGACTTCCTAAAGCT.................. 21 0 1 1.00 1 0 0 1 0 0 0
......AGCAAGTGCAAATCGTAAACTTTAAACTT........................................................................................................................................................................................................................ 29 0 2 1.00 2 1 1 0 0 0 0
.................................................................................................GCCGGTTATTTTACTTCTCATT.................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................GTGCCGGTTATTTTACTTCTCATT.................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
..........................................GGGAAGTCGGAAAATATTAGCAT.......................................................................................................................................................................................... 23 1 2 0.50 1 1 0 0 0 0 0
......................................AAGCGGGGAGTCGGAAAACATTAGCAT.......................................................................................................................................................................................... 27 1 2 0.50 1 1 0 0 0 0 0
.........AAGTGCAAATCGTAAACTTTAAACTTT....................................................................................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0 0
............................................GAAGTCGGAAAACATTAGCATT......................................................................................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0 0
.......................................AGCCGGAAGTCGGAAAACATTAGCAT.......................................................................................................................................................................................... 26 1 2 0.50 1 1 0 0 0 0 0
..................................................................................................................................................................................................................AACGGGTTGGACTTCCTAAA..................... 20 0 2 0.50 1 1 0 0 0 0 0
...AAGAGCAAGTGCAAATCGTAAACT................................................................................................................................................................................................................................ 24 0 2 0.50 1 1 0 0 0 0 0
..........................................GGGAAGTCGGAAAACATTAGCAG.......................................................................................................................................................................................... 23 1 2 0.50 1 1 0 0 0 0 0
.......................................TGCGGGAAGTCGGAAAACATTAGCAT.......................................................................................................................................................................................... 26 1 2 0.50 1 1 0 0 0 0 0
TGCAAGAGCAAGTGCAAATCGTAAACT................................................................................................................................................................................................................................ 27 0 2 0.50 1 1 0 0 0 0 0
.GCAAGAGCAAGTGCAAAGCGTAAACT................................................................................................................................................................................................................................ 26 1 2 0.50 1 1 0 0 0 0 0
............................................GAAGTCGGAAAACATTAGCA........................................................................................................................................................................................... 20 0 2 0.50 1 1 0 0 0 0 0
......AGCAAGTGCAAATCGTGAACTTTAAACTTT....................................................................................................................................................................................................................... 30 1 2 0.50 1 0 1 0 0 0 0
......................................AAGCGGGAAGTCGGAAAACATTAGCAT.......................................................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0 0
.....................................TAAGCGGGAAGTCGGAAAACATTAGCA........................................................................................................................................................................................... 27 1 2 0.50 1 1 0 0 0 0 0
..........................................GCGAAGTCGGAAAAGATTAGCAT.......................................................................................................................................................................................... 23 2 2 0.50 1 1 0 0 0 0 0
.....GAGCAAGTGCAAATCGTAAACT................................................................................................................................................................................................................................ 22 0 2 0.50 1 1 0 0 0 0 0
...........................................GGAAGTCGGAAAAGATTAGCAT.......................................................................................................................................................................................... 22 1 2 0.50 1 1 0 0 0 0 0
....AGAGCAAGTGCAAATCGTAAACT................................................................................................................................................................................................................................ 23 0 2 0.50 1 1 0 0 0 0 0
......AGCAAGTGCAAATCGTAAACTTTAAACT......................................................................................................................................................................................................................... 28 0 2 0.50 1 1 0 0 0 0 0
.GCAAGAGCAAGTGCAAATCGTGAACT................................................................................................................................................................................................................................ 26 1 2 0.50 1 1 0 0 0 0 0
............................................GAAGTCGGAAAAGATTAGCAT.......................................................................................................................................................................................... 21 1 2 0.50 1 1 0 0 0 0 0
.........................................CGGGAAGTCGGACAACATTAGCAT.......................................................................................................................................................................................... 24 1 2 0.50 1 0 0 0 1 0 0
.........................................................................................................................................................................................................GCGATGGTTAACGCGTTG................................ 18 2 9 0.11 1 1 0 0 0 0 0
.......................................................................................................................................................................................................CCGCGAGGGTTCACGGGTTG................................ 20 3 13 0.08 1 0 0 0 0 0 1
.GCAATAGCAAATGCAAAT........................................................................................................................................................................................................................................ 18 2 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_2:4947628-4947878 - dpe_1067 ACGTTCTCGTTCACGTTTAGCATTTGAAATTTGAAATTTTCGCCCTTCAGCCTTTTGTAATCGTAAGCAAACCTTGATATTGGATCAAATCTAATCACGGCCAATA---------------------AAATGAAGAGTAAAGGGATGTGTTGTTTATAGAAAACTGTTTATTCTAATAATATATATTATGTATATATAATAATATTTACCATTTTTTTAAAGCGCTTCCAATTGCCCAACCTGAAGGATTTCGACAAGTGGGGCAATCGCGT
dp5 3:4751084-4751349 - ACGTTCTCG------TTTAGCATTTGAAATTTGAAATTTTCGCCCTTCAGCCTTTTGTAATCGTAAGCAAACCTTGATATTGGATCAAATCTAACCACGGCCAATAAAAGTCGCCTAATCAGATATAAAATGAAGAGTAAAGGGATGTGTTGTTTATAGAAAACTGTTTATTCTAATAATATATATTATATATATATAATAATATTTACCATTTTTTTATAGCGCTTCCAATTGCCCAACTTGAAGGATTTCGACAAGTGGGGCAATCGCGT
droWil2 scf2_1100000004577:172211-172260 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTTTCAATTGCCCAATCTCAAGGATTTCGATAAGTGGGGCAATCGTGT
droVir3 scaffold_12963:8414779-8414829 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCTTTCAGCTGCCCAATCTGAAGGACTTTGACAAGTGGGGCAATCGTGT
droMoj3 scaffold_6500:1027229-1027279 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCTTTCAGCTGCCCAACTTGAAGGACTTTGACAAGTGGGGCAACCGCGT
droGri2 scaffold_15252:11569382-11569432 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGTTTCCAGTTGCCCAATCTCAAGGATTTCGACAAGTGGGGCAATCGTGT
droAna3 scaffold_13239:356033-356087 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-------------TAGCTTTTTTTTTAGCCCAACCTCAAGGACTTCAAGAAGTGGGCCAACCGAGT
droBip1 scf7180000396737:2006702-2006751 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTTCCAGCTGCCCAATCTCAAGGACTTTGACAAGTGGGGCAACCGAGT
droKik1 scf7180000302684:330672-330721 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTTCCAGCTGCCCAATCTCAAGGATTTCGAGAAGTGGGGCAACCGGGT
droFic1 scf7180000454059:227848-227897 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATTCCAGTTGCCTAACCTCAAGGATTTCGAGAAGTGGGGCAACCGGGT
droEle1 scf7180000491046:4323335-4323384 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATTCCAGCTGCCCAATCTCAAGGATTTCGAGAAGTGGGGCAATCGGGT
droRho1 scf7180000780030:115964-116013 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATTCCAGTTGCCCAATCTCAAGGATTTTAAGAAGTGGGGAAATCGGGT
droBia1 scf7180000302422:4971596-4971645 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATTCCAGCTGCCCAACCTCAAGGACTTCGAGAAGTGGAGCAACCGAGT
droTak1 scf7180000414323:119000-119049 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATTCCAGCTGCCCAATCTCAAGGATTTCGAGAAGTGGGGCAATCGTGT
droEug1 scf7180000409447:650603-650652 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATTCCAGCTGCCCAATCTCAAGGATAGAGAGAAGTGGGGCAATCGAGT
dm3 chr2L:18705223-18705272 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATTCCAACTGCCCAATCTCAAGGATTTTGAGAAGTGGGGCAATCGGGT
droSim2 2l:18260867-18260916 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTTCCAACTGCCCAATCTCAAGGATTTTGAGAAGTGGGGCAACCGGGT
droSec2 scaffold_7:2326732-2326781 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATTCCAACTGCCCAATCTCAAGGATTTTGAGAAGTGGGGCAACCGAGT
droYak3 2R:5218821-5218870 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATTCCAACTGCCCAATCTTAAGGATTTCGAGAAGTGGGGCAATCGGGT
droEre2 scaffold_4845:5571204-5571253 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATTCCAACTGCCCAATCTCAAGGATTTCGAGAAGTGGGGCAATCGGGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
ACGTTCTCGTTCACGTTTAGCATTTGAAATTTGAAATTTTCGCCCTTCAGCCTTTTGTAATCGTAAGCAAACCTTGATATTGGATCAAATCTAATCACGGCCAATA---------------------AAATGAAGAGTAAAGGGATGTGTTGTTTATAGAAAACTGTTTATTCTAATAATATATATTATGTATATATAATAATATTTACCATTTTTTTAAAGCGCTTCCAATTGCCCAACCTGAAGGATTTCGACAAGTGGGGCAATCGCGTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................TGTAATCGTAAGCAAACCTTGATAT................................................................................................................................................................................................251113.0011301130000
.......................................................TGTAATCGTAAGCAAACCTTGATA.................................................................................................................................................................................................24171.00710700001
.................................................................................................................................................................................................................................................TGAAGGATTTCGACAAGTGGG..........21140.00400354001
.................................................................................................................................................................................................................................................TGAAGGATTTCGACAAGTGG...........20134.00340340000
.................................................................................................................................................................................................................................................TGAAGGATTTCGACAAGTGGGG.........22128.00280223003
........................................................................................................................................................................................................................................TGCCCAACCTGAAGGATTTCGACAAG..............26127.00273231000
.................................................................................................................................................................................................................................................TGAAGGATTTCGACAAGTGGGGC........23126.00261190006
..........................................................................................................................................................................................................TATTTACCATTTTTTTAAAGCGCTT.............................................25125.00250250000
..................................................................................................................................TGAAGAGTAAAGGGATGTGTTGTT......................................................................................................................24118.00180171000
.......................................................................................................................................................................................................................................TTGCCCAACCTGAAGGATTTCGACAAG..............27115.0015861000
..........................................................................................................................................................................................................TATTTACCATTTTTTTAAAGCGCTTC............................................26112.00120120000
..................................................................................................................................TGAAGAGTAAAGGGATGTGTTGT.......................................................................................................................2318.008070001
.................................................................................................................................................................................................................................................TGAAGGATTTCGACAAGTGGGGCAA......2518.008070001
..................................................................................................................................TGAAGAGTAAAGGGATGTGTTG........................................................................................................................2227.50150110004
........................................................................................................................................................................................................................................TGCCCAACCTGAAGGATTTCGACAAGT.............2717.007070000
.................................................................................................................................................................................................................................................TGAAGGATTTCGACAAGTG............1917.007070000
..................................................................................................................................TGAAGAGTAAAGGGATGTGTTGTTTA....................................................................................................................2617.007070000
..........................................................................................................................................................................................................TATTTACCATTTTTTTAAAGCGCTTCCAA.........................................2916.006051000
...................................................................................................................................GAAGAGTAAAGGGATGTGTTGTT......................................................................................................................2316.006060000
..........................................................................................................................................................................................................TATTTACCATTTTTTTAAAGCGCT..............................................2416.006060000
..................................................................................................................................................................................................................................................GAAGGATTTCGACAAGTGG...........1916.006060000
.........................................................................................................................................TAAAGGGATGTGTTGTTTATAGAAAAC............................................................................................................2716.006040002
..........................................................................................................................................................................................................................................................TCGACAAGTGGGGCAATCGCGT2216.006050001
..................................................................................................................................TGAAGAGTAAAGGGATGTGTTGTTT.....................................................................................................................2516.006060000
......................................................TTGTAATCGTAAGCAAACCTTGATA.................................................................................................................................................................................................2515.005040010
.......................................................................................................................................................................................................................................TTGCCCAACCTGAAGGATTTCGACA................2515.005050000
....................................................TTTTGTAATCGTAAGCAAACCTTGA...................................................................................................................................................................................................2515.005050000
........................................................GTAATCGTAAGCAAACCTTGATAT................................................................................................................................................................................................2415.005050000
..............................................TCAGCCTTTTGTAATCGTAAGCAAACCT......................................................................................................................................................................................................2814.004040000
........................................................................................................................................................................................................................................TGCCCAACCTGAAGGATTTCGACAAGTG............2814.004040000
.................................................................................................................................................................................................................................................TGAAGGATTTCGACAAGTGGGGCAAT.....2614.004040000
.......................................................TGTAATCGTAAGCAAACCTTGAT..................................................................................................................................................................................................2314.004010003
.......................................................................................................................................................................................................................................TTGCCCAACCTGAAGGATTTCGACAA...............2614.004040000
.......................................................................................................................................................................................................................................TTGCCCAACCTGAAGGATTTCGA..................2314.004040000
..........................................................................................................................................................................................................................................................TCGACAAGTGGGGCAATCGC..2013.003030000
..................................................................................................................................................................................................................................TCCAATTGCCCAACCTGAAGGATTTCGA..................2813.003030000
.......................................................TGTAATCGTAAGCAAACCTTGATATT...............................................................................................................................................................................................2613.003030000
..................................................................................................................................................................................................................................................GAAGGATTTCGACAAGTGGGG.........2113.003030000
.......................................................................................................................................................................................................................................TTGCCCAACCTGAAGGATTTCGACAAGT.............2813.003030000
............................................................................................................................................................................................................................................CAACCTGAAGGATTTCGACAAGTGGGGC........2812.002200000
...............................................................................TTGGATCAAATCTAATCACGGCCAA........................................................................................................................................................................2512.002020000
........................................................GTAATCGTAAGCAAACCTTGATA.................................................................................................................................................................................................2312.002020000
.................TAGCATTTGAAATTTGAAATTTTCG......................................................................................................................................................................................................................................2522.004031000
.........................................................................................................................................................................................................................................GCCCAACCTGAAGGATTTCGACAAG..............2512.002020000
.........................................................TAATCGTAAGCAAACCTTGATATTGGAT...........................................................................................................................................................................................2812.002110000
..........................................................................................................................................................................................................................................................TCGACAAGTGGGGCAATCG...1912.002020000
.............................................................................................................................................................AGAAAACTGTTTATTCTAATAATA...........................................................................................2412.002020000
............................................................................................................................................................................................................................................CAACCTGAAGGATTTCGACAAGTGGGG.........2712.002020000
..............................................................................................................................................................................................................................................ACCTGAAGGATTTCGACAAGTGGGG.........2512.002020000
.......................................................................................................................................................................................................................................................ATTTCGACAAGTGGGGCAATCGCGT2512.002020000
....................................................................................TCAAATCTAATCACGGCCAATA---------------------AAAT.............................................................................................................................................2612.002020000
.........................................................TAATCGTAAGCAAACCTTGATAT................................................................................................................................................................................................2312.002020000
..........................................................................................................................................................................................................................................................TCGACAAGTGGGGCAATCGCG.2112.002020000
..............................................................................................................................................................................................................................................ACCTGAAGGATTTCGACAAGTGGGGC........2612.002020000
............................................................................................................................................................................................................................................CAACCTGAAGGATTTCGACAAGTGGG..........2612.002020000
..........................................................................................................................................................................................................................................CCCAACCTGAAGGATTTCGACAAGTG............2612.002020000
......................................................................................................................................................................................................................TTTTAAAGCGCTTCCAATTGCCCAACCT..............................2812.002020000
.................................................................................................................................................................................................................................................TGAAGGATTTCGACAAGTGGGGCA.......2412.002010001
...................................................................................................................................GAAGAGTAAAGGGATGTGTTGTTTA....................................................................................................................2512.002020000
.............................................................................................................................................................................................................................................AACCTGAAGGATTTCGACAAGTGGGGC........2712.002020000
............................................................................................................................................................................................................................................CAACCTGAAGGATTTCGACAAGTGGGGCT.......2912.002200000
.........................................................................TTGATATTGGATCAAATCTAATCACGG............................................................................................................................................................................2712.002020000
...............................................................................................................................................................................................................................................CCTGAAGGATTTCGACAAGTG............2112.002020000
.................TAGCATTTGAAATTTGAAATTTTCGCCC...................................................................................................................................................................................................................................2822.004040000
................................................................................................................................................................................................................................................CTGAAGGATTTCGACAAGTGG...........2112.002020000
......................................................................................................................................................................................................................TTTTAAAGCGCTTCCAATTGCCCAACC...............................2712.002020000
.........................................................................................................................................................................................................................TAAAGCGCTTCCAATTGCCCAACCT..............................2512.002020000
..................................................................................................................................................................................................................................................GAAGGATTTCGACAAGTGGGGCAA......2412.002020000
................................................................................TGGATCAAATCTAATCACGGCC..........................................................................................................................................................................2212.002020000
........................................................................................................TA---------------------AAATGAAGAGTAAAGGG................................................................................................................................1921.503010002
....TCTCGTTCACGTTTAGCATTTGAAA...................................................................................................................................................................................................................................................2521.503030000
..................................................................................................................................TGAAGAGTAAAGGGATGTGTT.........................................................................................................................2121.503020001
.................TAGCATTTGAAATTTGAAATTTTCGCCCT..................................................................................................................................................................................................................................2921.503030000
.............................TTTGAAATTTTCGCCCTTCAGCC............................................................................................................................................................................................................................2321.002020000
........................................................................................................................................................................................................................TTAAAGCGCTTCCAATTGCCCAACC...............................2511.001010000
............................................................................................................................................................................................................TTTACCATTTTTTTAAAGCGCTT.............................................2311.001010000
..................................................................................................................................................................................................................................................GAAGGATTTCGACAAGTGGGGCAATCG...2711.001010000
................................................................AAGCAAACCTTGATATTGGATT..........................................................................................................................................................................................2211.001100000
..............................................................................................................................................................................................................................CGCTTCCAATTGCCCAACCTGAAGGATT......................2811.001010000
......................................................................................................................................................................................................................................ATTGCCCAACCTGAAGGATTTCGACA................2611.001010000
....TCTCGTTCACGTTTAGCATTTGAAATT.................................................................................................................................................................................................................................................2721.002020000
..............................................................................................................................................................................................................................................ACCTGAAGGATTTCGACAAGTGGGGCA.......2711.001010000
.................................................................................................................................................................................................................................................TGAAGGATTTCGACAAGTGGGA.........2211.001010000
..........................................................................................................................................AAAGGGATGTGTTGTTTATAGAAAAC............................................................................................................2611.001010000
.............................................................................................................................................................................................................................................AACCTGAAGGATTTCGACAAGTGG...........2411.001010000
...................................................................................................................................GAAGAGTAAAGGGATGTGTTGTTTATA..................................................................................................................2711.001010000
.........................................................................................................................................TAAAGGGATGTGTTGTTTATAGAA...............................................................................................................2411.001010000
........................................................................................................................................................................................................................................................TTTCGACAAGTGGGGCAATCGCGA2411.001010000
.......................................................................................................................................................................................................................................TTGCCCAACCTGAAGGATTTCG...................2211.001010000
................................................................................TGGATCAAATCTAATCACGG............................................................................................................................................................................2011.001010000
................................................................AAGCAAACCTTGATATTGGATCAAA.......................................................................................................................................................................................2511.001010000
....................................................................................................................................................................TGTTTATTCTAATAATATA.........................................................................................1911.001010000
...........................................................................................................................................................................................................ATTTACCATTTTTTTAAAGCGCT..............................................2311.001010000
...................................................................................................................................GAAGAGTAAAGGGATGTGTTGTTA.....................................................................................................................2411.001010000
....................................................................................................................................AAGAGTAAAGGGATGTGTTGT.......................................................................................................................2111.001010000
..........................................................................................CTAATCACGGCCAATA---------------------AAATGAAGAG.......................................................................................................................................2611.001010000
......................................................TTGTAATCGTAAGCAAACCTTGAT..................................................................................................................................................................................................2411.001010000
...................................................................................................................................GAAGAGTAAAGGGATGTGTTG........................................................................................................................2121.002020000
..........................................................................................................................................................................................................................................................TCGACAAGTGGGGCAATC....1811.001010000
..............................................................................................................................................................................................................................................ACCTGAAGGATTTCGACAAGTGGG..........2411.001000001
.....................................................................................CAAATCTAATCACGGCCAATA---------------------AAAT.............................................................................................................................................2511.001010000
...............................................................................................................................AAATGAAGAGTAAAGGGATGTGTTGT.......................................................................................................................2611.001010000
..................................................................................................................................................................................................................................................GAAGGATTTCGACAAGTGGGGCAATA....2611.001010000
...................................................................................................................................................................................................................................................AAGGATTTCGACAAGTGGG..........1911.001010000
.........................................................................................................................................TAAAGGGATGTGTTGTTTATAGAAAA.............................................................................................................2611.001010000
.......................................................TGTAATCGTAAGCAAACCTTGATATTG..............................................................................................................................................................................................2711.001010000
...................................................................................................................................................................................................................................................AAGGATTTCGACAAGTGG...........1811.001010000
.........................................................................................................................................TAAAGGGATGTGTTGTTTATA..................................................................................................................2111.001010000
..................................................................................................................................TGAAGAGTAAAGGGATGTGT..........................................................................................................................2021.002000002
....................................................................................................................................................................................................................TTTTTTAAAGCGCTTCCAATTGCCCAACC...............................2911.001010000
.........................................................................................................................................................................................................................................................TTCGACAAGTGGGGCAATCGAAA2311.001010000
....................................................TTTTGTAATCGTAAGCAAACCTTGATA.................................................................................................................................................................................................2711.001010000
.........................................................................................................................................................................................................................TAAAGCGCTTCCAATTGCCCAACCTGA............................2711.001010000
..................................................................................................................................................................................................................................................GAAGGATTTCGACAAGTGGG..........2011.001010000
.........................................................................................................................................................................................................................TAAAGCGCTTCCAATTGCCCAACCTG.............................2611.001010000
........................................................................................................TA---------------------AAATGAAGAGTAAAGGGATGTG...........................................................................................................................2421.002010001
................................................................................TGGATCAAATCTAATCACGGCCAATA---------------------A................................................................................................................................................2711.001010000
.............................................TTCAGCCTTTTGTAATCGTAAGCAAACC.......................................................................................................................................................................................................2811.001010000
.........................................................................................................................................................................................................................................GCCCAACCTGAAGGATTTCGACAAGT.............2611.001010000
........................................................................................................................................................................................................................................TGCCCAACCTGAAGGATTTCGACA................2411.001010000
...............................................................................TTGGATCAAATCTAATCACGGCCAATA---------------------.................................................................................................................................................2711.001010000
..................................................................................................................................................................................................................................................GAAGGATTTCGACAAGTG............1811.001010000
...............................................................................................................................................GATGTGTTGTTTATAGAAAACTGTTA.......................................................................................................2611.001010000
.........................................................................................................................................................................................................................................................TTCGACAAGTGGGGCAATCGCGT2311.001010000
.....................................................TTTGTAATCGTAAGCAAACCTTGATA.................................................................................................................................................................................................2611.001010000
................................................................................TGGATCAAATCTAATCACGGCCAATA---------------------AA...............................................................................................................................................2811.001010000
............................................................TCGTAAGCAAACCTTGATATTGGA............................................................................................................................................................................................2411.001010000
........................................................................................................................................................................................................................TTAAAGCGCTTCCAATTGCCCAACCTG.............................2711.001010000
.............................................................................................................................................................................................................................................AACCTGAAGGATTTCGACAAGTGGG..........2511.001010000
....................................................................................................................................................................................................................................CAATTGCCCAACCTGAAGGATTTCG...................2511.001010000
....................................................................................................................................AAGAGTAAAGGGATGTGTTGTTTATA..................................................................................................................2611.001010000
...................................................................................................................................GAAGAGTAAAGGGATGTGTTGTTT.....................................................................................................................2411.001010000
......................................................................................................................................................................................................................................................GATTTCGACAAGTGGGGCAATCG...2311.001010000
................................................................................TGGATCAAATCTAATCACGGCCAATA---------------------.................................................................................................................................................2611.001010000
..........................................................................................................................................AAAGGGATGTGTTGTTTATAGAA...............................................................................................................2311.001010000
.....................................................TTTGTAATCGTAAGCAAACCTTGATAT................................................................................................................................................................................................2711.001010000
.........................................................TAATCGTAAGCAAACCTTGATATTGGA............................................................................................................................................................................................2711.001010000
...............................................................................................................................................................................................................................................CCTGAAGGATTTCGACAAGTGGGG.........2411.001010000
.............................................................................................................................................................................................................................................AACCTGAAGGATTTCGACAAGTGGGGCA.......2811.001010000
.................................................................................................................................................................................................................................................TGAAGGATTTCGACAAGTGGGGCAATC....2711.001010000
.......................................................................................................................................................................................................................................TTGCCCAACCTGAAGGATTTCGAC.................2411.001010000
.........................................................................................................................................TAAAGGGATGTGTTGTTTATAGA................................................................................................................2311.001000001
.............................................TTCAGCCTTTTGTAATCGTAAGCAAACCT......................................................................................................................................................................................................2911.001010000
..................................................................................................................................................................................................................................................GAAGGATTTCGACAAGTGGGGC........2211.001010000
...................................................................................................................................................................................................................................................AAGGATTTCGACAAGTGGGGCAA......2311.001010000
............................................................TCGTAAGCAAACCTTGATATTGGATC..........................................................................................................................................................................................2611.001010000
...................................................................................................................................GAAGAGTAAAGGGATGTGTTGTA......................................................................................................................2311.001010000
............................................................................................AATCACGGCCAATA---------------------AAATGAAGAGTA.....................................................................................................................................2611.001010000
.............................TTTGAAATTTTCGCCCTTCAGC.............................................................................................................................................................................................................................2221.002020000
...............................................................................................................................................................................................................................................CCTGAAGGATTTCGACAAGTGGGGC........2511.001010000
..................................................................................................................................................................................................................................TCCAATTGCCCAACCTGAAGGATT......................2411.001010000
..........................................................................................................................................................................................................................................................TCGACAAGTGGGGCAATCGCGC2211.001010000
.........................................................................................TCTAATCACGGCCAATA---------------------AAATGAAGAG.......................................................................................................................................2711.001000001
...............................................................TAAGCAAACCTTGATATTGGATCAAAT......................................................................................................................................................................................2711.001010000
..................................................................................................................................................................................................................................................GAAGGATTTCGACAAGTGGGA.........2111.001010000
............................................................TCGTAAGCAAACCTTGATATTGGAT...........................................................................................................................................................................................2511.001010000
..........................................................................................................................................................TATAGAAAACTGTTTATTCTAATA..............................................................................................2411.001010000
..........................................................................................................................................AAAGGGATGTGTTGTTTATAGA................................................................................................................2211.001010000
.......................................................TGTAATCGTAAGCAAACCTTGATAA................................................................................................................................................................................................2511.001010000
.................................................................................................................................................................................................................................................TGAAGGATTTCGACAAGTGGA..........2111.001010000
...........................................................................................................................................................................................................ATTTACCATTTTTTTAAAGCGCTT.............................................2411.001010000
............................................................................................................................................................................................................................................CAACCTGAAGGATTTCGA..................1811.001010000
...........................................................................................TAATCACGGCCAATA---------------------AAATGAAGAG.......................................................................................................................................2511.001000001
...........................................................................................TAATCACGGCCAATA---------------------AAATGAAGAGT......................................................................................................................................2611.001010000
.........................................................................................................................................TAAAGGGATGTGTTGTTTATAG.................................................................................................................2211.001010000
.......................................................................................................................................................................................................................................TTGCCCAACCTGAAGGATTTCGACAAA..............2711.001010000
...............................................................................TTGGATCAAATCTAATCACGGC...........................................................................................................................................................................2211.001010000
...................................................................................................................................................................................................................................................AAGGATTTCGACAAGTGGGGC........2111.001010000
....................................................................................................................................AAGAGTAAAGGGATGTGTTGTT......................................................................................................................2211.001010000
.........................................................................................................................................TAAAGGGATGTGTTGTTTATAGAAA..............................................................................................................2511.001010000
...........................................................................................................................................................................................................................................................CGACAAGTGGGGCAATCGC..1920.501010000
....................CATTTGAAATTTGAAATTTTCGCCC...................................................................................................................................................................................................................................2520.501010000
.......................................................TGTAATCGTAAGCAAACCTTG....................................................................................................................................................................................................2120.501010000
..................................................................................................................................TGAAGAGTAAAGGGATGTG...........................................................................................................................1920.501010000
............ACGTTTAGCATTTGAAATTTGAAAT...........................................................................................................................................................................................................................................2520.501010000
...............................TGAAATTTTCGCCCTTCAGCCTTTTG.......................................................................................................................................................................................................................2620.501010000
.............................TTTGAAATTTTCGCCCTTCAGCCT...........................................................................................................................................................................................................................2420.501010000
........................................................................................................TA---------------------AAATGAAGAGTAAAGGGATGT............................................................................................................................2320.501010000
................TTAGCATTTGAAATTTGAAATTT.........................................................................................................................................................................................................................................2320.501010000
.......................................................TGTAATCGTAAGCAAACCT......................................................................................................................................................................................................1920.501010000
.........................................................................................................................................................................................................................................GCCCAACCTGAAGGATTT.....................1820.501010000
................TTAGCATTTGAAATTTGAAATTTTCGCC....................................................................................................................................................................................................................................2820.501010000
.........................................................................................................................................................................................................................TAAAGCGCTTCCAATTGCA....................................1920.501010000
....................................................................................................................................................................................................................TTTTTTAAAGCGCTTCCAAT........................................2020.501010000
.............................TTTGAAATTTTCGCCCTTCAGCCTTTTG.......................................................................................................................................................................................................................2820.501010000
........................................................................................................TA---------------------AAATGAAGAGTAAAGGGAT..............................................................................................................................2120.501100000
....TCTCGTTCACGTTTAGCATTTGA.....................................................................................................................................................................................................................................................2320.501010000
..................AGCATTTGAAATTTGAAATTTTCG......................................................................................................................................................................................................................................2420.501010000
........................TGAAATTTGAAATTTTCGCCCTTCAGCC............................................................................................................................................................................................................................2820.501010000
...............................TGAAATTTTCGCCCTTCAGCCT...........................................................................................................................................................................................................................2220.501010000
.....CTCGTTCACGTTTAGCATTTGAAA...................................................................................................................................................................................................................................................2420.501010000
......................................................................................................................................................................................................................TTTTAAAGCGCTTCCAATTGC.....................................2120.501010000
.................TAGCATTTGAAATTTGAAATTTTCGCC....................................................................................................................................................................................................................................2720.501010000
.............................TTTGAAATTTTCGCCCTTCAGCCTTT.........................................................................................................................................................................................................................2620.501010000
dp5
ACGTTCTCG------TTTAGCATTTGAAATTTGAAATTTTCGCCCTTCAGCCTTTTGTAATCGTAAGCAAACCTTGATATTGGATCAAATCTAACCACGGCCAATAAAAGTCGCCTAATCAGATATAAAATGAAGAGTAAAGGGATGTGTTGTTTATAGAAAACTGTTTATTCTAATAATATATATTATATATATATAATAATATTTACCATTTTTTTATAGCGCTTCCAATTGCCCAACTTGAAGGATTTCGACAAGTGGGGCAATCGCGTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................................................................................................................................................................................................GACAAGTGGGGCAATCGCGT2020.5010100000000
droWil2
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTTTCAATTGCCCAATCTCAAGGATTTCGATAAGTGGGGCAATCGTGTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................................................................................................................................................ATTTCGATAAGTGGGGCAATCGTGT2512.00200200
................................................................................................................................................................................................................................................CTCAAGGATTTCGATAAGTG............2012.00201100
................................................................................................................................................................................................................................................CTCAAGGATTTCGATAAGTGGGGC........2412.00210100
.............................................................................................................................................................................................................................................AATCTCAAGGATTTCGATAAGT.............2211.00101000
................................................................................................................................................................................................................................................CTCAAGGATTTCGATAAGTGGG..........2211.00101000
..................................................................................................................................................................................................................................TTCAATTGCCCAATCTCAAGGA........................2211.00101000
..............................................................................................................................................................................................................................................ATCTCAAGGATTTCGATAAGTGGC..........2411.00101000
..............................................................................................................................................................................................................................................ATCTCAAGGATTTCGATAAGTGGGGC........2611.00100010
......................................................................................................................................................................................................................................................GATTTCGATAAGTGGGGCAATCGTGT2611.00100010
............................................................................................................................................................................................................................................................GATAAGTGGGGCAATCGTGT2011.00100100
............................................................................................................................................................................................................................................CAATCTCAAGGATTTCGATAAGT.............2311.00100010
............................................................................................................................................................................................................................................................GATAAGTGGGGCAATCGTG.1911.00100100
..............................................................................................................................................................................................................................CGCTTTCAATTGCCCAATCTCAAGGAT.......................2711.00100010
......................................................................................................................................................................................................................................................GATTTCGATAAGTGGGGCAAT.....2111.00100100
....................................................................................................................................................................................................................................................AGGATTTCGATAAGTGGGGCA.......2111.00100010
.....................................................................................................................................................................................................................................................GGATTTCGATAAGTGGGGC........1911.00110000
droVir3
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCTTTCAGCTGCCCAATCTGAAGGACTTTGACAAGTGGGGCAATCGTGTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................................................................................................................................................................................GACTTTGACAAGTGGGGC........1813.003000200000000000000000000000000100000000000000000000000000000000
......................................................................................................................................................................................................................................................GACTTTGACAAGTGGGGCAAT.....2112.002000000000000000100000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................ATCTGAAGGACTTTGACA................1811.001000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................CAATCTGAAGGACTTTGACA................2011.001000000000000000010000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................TGCCCAATCTGAAGGACTTTGACAA...............2511.001000000000000001000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................AATCTGAAGGACTTTGACAAGTGGGGC........2711.001000000000000000000000000000000000000000000000000000000000000100
......................................................................................................................................................................................................................................GCTGCCCAATCTGAAGGACTT.....................2111.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................TGCCCAATCTGAAGGACTT.....................1911.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................CCAATCTGAAGGACTTTGACA................2111.001000000000000000000000000000000000000000000000000000000000000010
droMoj3
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCTTTCAGCTGCCCAACTTGAAGGACTTTGACAAGTGGGGCAACCGCGTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................................................................................................................................................................................................................................................TGAAGGACTTTGACAAGTGGGGC........2312.002200000
..................................................................................................................................................................................................................................................GAAGGACTTTGACAAGTGGGG.........2111.001100000
..................................................................................................................................................................................................................................................GAAGGACTTTGACAAGTGGGGC........2211.001100000
......................................................................................................................................................................................................................................................GACTTTGACAAGTGGGGCAACCGCGT2611.001100000
.............................................................................................................................................................................................................................GCGCTTTCAGCTGCCCAACT...............................2011.001100000
...................................................................................................................................................................................................................................................AAGGACTTTGACAAGTGGGG.........2011.001100000
.........................................................................................................................................................................................................................................GCCCAACTTGAAGGACTTTGACAAGT.............2611.001100000
..........................................................................................................................................................................................................................................................TTGACAAGTGGGGCAACCGCGT2211.001100000
............................................................................................................................................................................................................................................CAACTTGAAGGACTTTGACAAGTGGGG.........2711.001100000
...............................................................................................................................................................................................................................................CTTGAAGGACTTTGACAAGTGGGGC........2511.001100000
......................................................................................................................................................................................................................................................GACTTTGACAAGTGGGGC........1811.001100000
droGri2
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGTTTCCAGTTGCCCAATCTCAAGGATTTCGACAAGTGGGGCAATCGTGTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...................................................................................................................................................................................................................................................AAGGATTTCGACAAGTGGGGC........2111.00110
droAna3
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-------------TAGCTTTTTTTTTAGCCCAACCTCAAGGACTTCAAGAAGTGGGCCAACCGAGTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTTCCAGCTGCCCAATCTCAAGGACTTTGACAAGTGGGGCAACCGAGTSizeHit CountTotal NormTotal
No Reads
droKik1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTTCCAGCTGCCCAATCTCAAGGATTTCGAGAAGTGGGGCAACCGGGTSizeHit CountTotal NormTotal
No Reads
droFic1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATTCCAGTTGCCTAACCTCAAGGATTTCGAGAAGTGGGGCAACCGGGTSizeHit CountTotal NormTotal
No Reads
droEle1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATTCCAGCTGCCCAATCTCAAGGATTTCGAGAAGTGGGGCAATCGGGTSizeHit CountTotal NormTotal
No Reads
droRho1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATTCCAGTTGCCCAATCTCAAGGATTTTAAGAAGTGGGGAAATCGGGTSizeHit CountTotal NormTotal
No Reads
droBia1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATTCCAGCTGCCCAACCTCAAGGACTTCGAGAAGTGGAGCAACCGAGTSizeHit CountTotal NormTotal
No Reads
droTak1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATTCCAGCTGCCCAATCTCAAGGATTTCGAGAAGTGGGGCAATCGTGTSizeHit CountTotal NormTotal
No Reads
droEug1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATTCCAGCTGCCCAATCTCAAGGATAGAGAGAAGTGGGGCAATCGAGTSizeHit CountTotal NormTotal
No Reads
dm3
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATTCCAACTGCCCAATCTCAAGGATTTTGAGAAGTGGGGCAATCGGGTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................................................................................................................................................CAAGGATTTTGAGAAGTGG...........1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................GATTCCAACTGCCCAATC...............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................AAGGATTTTGAGAAGTGGGGCA.......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................CTCAAGGATTTTGAGAAG..............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................AATCTCAAGGATTTTGAGAAGTGGGGCA.......2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................TCAAGGATTTTGAGAAGTGGGT.........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...........................................................................................................................................................................................................................................CCAATCTCAAGGATTTTGAGAAGTGGT..........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................GAGAAGTGGGGCAATCGGG.1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................TTTGAGAAGTGGGGCAATCGGGT2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................TCAAGGATTTTGAGAAGTGGGGCA.......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................TTTGAGAAGTGGGGCAAT.....1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................AACTGCCCAATCTCAAGGATTTTGA..................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................ATTTTGAGAAGTGGGGCA.......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................AGGATTTTGAGAAGTGGG..........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.....................................................................................................................................................................................................................................................GGATTTTGAGAAGTGGGGCAATC....2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................TTCCAACTGCCCAATCTCA............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................TTCCAACTGCCCAATCTCAAGGATTT.....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................AGGATTTTGAGAAGTGGGGCA.......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....................................................................................................................................................................................................................................CAACTGCCCAATCTCAAGGATTTTGA..................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................CTGCCCAATCTCAAGGATTTTGA..................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTTCCAACTGCCCAATCTCAAGGATTTTGAGAAGTGGGGCAACCGGGTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................AAGGATTTTGAGAAGTGGGGCAA......2317.00700000000000070000
...................................................................................................................................................................................................................................................AAGGATTTTGAGAAGTGGGGCA.......2211.00100000000000010000
...................................................................................................................................................................................................................................................AAGGATTTTGAGAAGTGGGGC........2111.00100000000000010000
...................................................................................................................................................................................................................................................AAGGATTTTGAGAAGTGGGGCAT......2311.00100000000000010000
...................................................................................................................................................................................................................................................AAGGATTTTGAGAAGTGGGGCAACC....2511.00100000000000010000
..................................................................................................................................................................................................................................................CAAGGATTTTGAGAAGTGGGGC........2211.00101000000000000000
....................................................................................................................................................................................................................................................AGGATTTTGAGAAGTGGGG.........1911.00100000000000100000
...................................................................................................................................................................................................................................................AAGGATTTTGAGAAGTGGGGCAATAA...2611.00100000000000010000
...................................................................................................................................................................................................................................CCAACTGCCCAATCTCAAGGATTTTGA..................2711.00100010000000000000
...................................................................................................................................................................................................................................................AAGGATTTTGAGAAGTGGGGCAAC.....2411.00100000000000010000
...................................................................................................................................................................................................................................................AAGGATTTTGAGAAGTGGT..........1911.00100000000000010000
droSec2
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATTCCAACTGCCCAATCTCAAGGATTTTGAGAAGTGGGGCAACCGAGTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................................................................................................................................................AGGATTTTGAGAAGTGGGG.........1912.0020110
..................................................................................................................................................................................................................................................CAAGGATTTTGAGAAGTGGGG.........2111.0010100
.................................................................................................................................................................................................................................................TCAAGGATTTTGAGAAGTGGG..........2111.0010001
................................................................................................................................................................................................................................................CTCAAGGATTTTGAGAAGTGGG..........2211.0010010
....................................................................................................................................................................................................................................................AGGATTTTGAGAAGTGGG..........1811.0010010
.....................................................................................................................................................................................................................................................GGATTTTGAGAAGTGGGG.........1811.0011000
..................................................................................................................................................................................................................................TCCAACTGCCCAATCTCAAGGATTTTGA..................2811.0011000
droYak3
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATTCCAACTGCCCAATCTTAAGGATTTCGAGAAGTGGGGCAATCGGGTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................................................................................................CTTAAGGATTTCGAGAAGTGGGGC........2413.00300200010000
...................................................................................................................................................................................................................................................AAGGATTTCGAGAAGTGGGG.........2011.00100000010000
..............................................................................................................................................................................................................................................................GAAGTGGGGCAATCGGGT1811.00101000000000
....................................................................................................................................................................................................................................................AGGATTTCGAGAAGTGGGGC........2011.00100100000000
......................................................................................................................................................................................................................................................GATTTCGAGAAGTGGGGCAATCGGGT2611.00100000010000
.........................................................................................................................................................................................................................................GCCCAATCTTAAGGATTTCGAGA................2311.00101000000000
......................................................................................................................................................................................................................................................GATTTCGAGAAGTGGGGCAAT.....2111.00100000010000
...............................................................................................................................................................................................................................GATTCCAACTGCCCAATCTT.............................2011.00101000000000
................................................................................................................................................................................................................................................CTTAAGGATTTCGAGAAGTGGG..........2211.00101000000000
.........................................................................................................................................................................................................................................................TTCGAGAAGTGGGGCAATCGGGT2311.00100000010000
...........................................................................................................................................................................................................................................CCAATCTTAAGGATTTCGAGAAGTGGGGC........2911.00100000010000
droEre2
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATTCCAACTGCCCAATCTCAAGGATTTCGAGAAGTGGGGCAATCGGGTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................................................................................CCAACTGCCCAATCTCAAGGATTTCGA..................2711.0011000000
..................................................................................................................................................................................................................................................CAAGGATTTCGAGAAGTGGGGC........2211.0011000000
......................................................................................................................................................................................................................................................GATTTCGAGAAGTGGGGCAATCGGGT2611.0010000100
..............................................................................................................................................................................................................................................................GAAGTGGGGCAATCGGGT1811.0010100000
..................................................................................................................................................................................................................................TCCAACTGCCCAATCTCAAGG.........................2111.0011000000
................................................................................................................................................................................................................................................CTCAAGGATTTCGAGAAGT.............1911.0011000000

Generated: 06/08/2015 at 03:41 PM