ID:

dpe_1024

 Coordinate:

scaffold_2:2072126-2072276 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-38.9 -38.1 -37.9 -37.9

Flybase annnotation

exon [dper_GLEANR_11342:16]; CDS [Dper\GL11199-cds]; intron [Dper\GL11199-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TGGTTGATCTTCTCAATAATGGGTGTTCAGTTCTTTGGTGGGAAGTTTTTCAAGTGCGTCAATGAAATGGGAGAATTGCTGCCAATTACTGTGAGTACACTACACACACTCCCAATATGGAGCAGGAGAACGATCTACCTGTCCTGTGTGACTGTACAAACCCACCCTACTCATATTTCCTTCTCCATTTATTGCGTGCAGGAGGTGAACGACAAGTGGGACTGCATTGAGCAGAACTACACGTGGATCAA
**************************************************....((((.((((((....((((((...............(((.(((((...((((((..........(((.(((((((....))).)))))))))))))..))))).....)))...............))))))..))))))))..)).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V111
male body		 V057
head
 M021
embryo
 V042
embryo
...............................................................................................................................GAACCATCTACCTGTCCTGTT....................................................................................................... 21 2 1 375.00 375 373 2 0 0 0
...............................................................................................................................GAACCATCTACCTGTCCTGTTG...................................................................................................... 22 3 1 339.00 339 334 5 0 0 0
...............................................................................................................................GAACCATCTACCTGTCCTGTTGG..................................................................................................... 23 3 1 323.00 323 320 3 0 0 0
............................................................................................................................GTTGAACCATCTACCTGTCCT.......................................................................................................... 21 3 1 183.00 183 164 13 6 0 0
................................................................................................................................AACCATCTACCTGTCCTGTTGG..................................................................................................... 22 3 1 135.00 135 132 2 1 0 0
................................................................................................................................AACCATCTACCTGTCCTGTT....................................................................................................... 20 2 1 111.00 111 110 1 0 0 0
..............................................................................................................................TGAACCATCTACCTGTCCTGTT....................................................................................................... 22 3 1 102.00 102 102 0 0 0 0
................................................................................................................................AACCATCTACCTGTCCTGTTG...................................................................................................... 21 3 2 83.00 166 165 1 0 0 0
.................................................................................................................................ACCATCTACCTGTCCTGTTGG..................................................................................................... 21 3 3 42.00 126 124 1 1 0 0
.................................................................................................................................ACCATCTACCTGTCCTGTT....................................................................................................... 19 2 2 35.00 70 70 0 0 0 0
..............................................................................................................................TGAACCATCTACCTGTCCTGT........................................................................................................ 21 2 1 33.00 33 28 5 0 0 0
...............................................................................................................................GAACCATCTACCTGTCCTGT........................................................................................................ 20 1 1 31.00 31 30 0 1 0 0
..............................................................................................................................TGAACCATCTACCTGTCCT.......................................................................................................... 19 2 1 30.00 30 26 1 1 2 0
..............................................................................................................................TGAACCATCTACCTGTCCTG......................................................................................................... 20 2 1 26.00 26 26 0 0 0 0
....................................................................................................................................ATCTACCTGTCCTGTTGGT.................................................................................................... 19 3 17 19.18 326 318 6 2 0 0
...............................................................................................................................GAACCATCGACCTGTCCTGTT....................................................................................................... 21 3 1 16.00 16 16 0 0 0 0
.............................................................................................................................TTGAACCATCTACCTGTCCTG......................................................................................................... 21 3 2 13.50 27 27 0 0 0 0
....................................................................................................................................ATCTACCTGTCCTGTTGG..................................................................................................... 18 2 2 12.00 24 23 0 1 0 0
................................................................................................................................AACCATCTACCTGTCCTGT........................................................................................................ 19 1 1 10.00 10 10 0 0 0 0
............................................................................................................................GTTGAACCATCTACCTGTCCTGT........................................................................................................ 23 3 1 10.00 10 10 0 0 0 0
...............................................................................................................................GAACCATCTACCTGTCCT.......................................................................................................... 18 1 1 10.00 10 9 0 1 0 0
.................................................................................................................................ACCATCTACCTGTCCTGTTG...................................................................................................... 20 3 10 9.40 94 93 1 0 0 0
.............................................................................................................................TTGAACCATCTACCTGTCCT.......................................................................................................... 20 3 3 8.00 24 19 4 1 0 0
...............................................................................................................................GAACCATCTACCTGTCCTG......................................................................................................... 19 1 1 8.00 8 8 0 0 0 0
...............................................................................................................................GAACCATCTACCTGTCCTGTC....................................................................................................... 21 2 1 8.00 8 8 0 0 0 0
...........................................................................................................................CGTTGAACGATCTACCTGTCC........................................................................................................... 21 3 1 7.00 7 7 0 0 0 0
..................................................................................................................................CCATCTACCTGTCCTGTTGG..................................................................................................... 20 3 10 6.90 69 69 0 0 0 0
...............................................................................................................................GAACCATCAACCTGTCCTGTT....................................................................................................... 21 3 1 5.00 5 5 0 0 0 0
...............................................................................................................................GAACCATCTACCTGTCCTGTTGGA.................................................................................................... 24 3 1 4.00 4 4 0 0 0 0
...................................................................................................................................GATCTACCTGTCCTGTTGGT.................................................................................................... 20 3 1 4.00 4 4 0 0 0 0
.............................................................................................................................TTGAACCATCTACCTGTCCTGT........................................................................................................ 22 3 1 4.00 4 4 0 0 0 0
..................................................................................................................................CCATCTACCTGTCCTGTTG...................................................................................................... 19 3 20 2.15 43 43 0 0 0 0
............................................................................................................................GTTGAACCATCTACCTGTCCTG......................................................................................................... 22 3 1 2.00 2 2 0 0 0 0
...............................................................................................................................GAACCATCTACCTGTCCTGTTTGT.................................................................................................... 24 3 1 2.00 2 2 0 0 0 0
...............................................................................................................................GAACCATCTACCTGTCCTTT........................................................................................................ 20 2 1 2.00 2 2 0 0 0 0
...............................................................................................................................GAACCATCTACCTGTCCTTGGT...................................................................................................... 22 3 1 2.00 2 2 0 0 0 0
................................................................................................................................AACCATCTACCTGTCCTGTTGGA.................................................................................................... 23 3 1 1.00 1 1 0 0 0 0
................................................................................................................................AACCATCTACCTGTCCTGTTTGT.................................................................................................... 23 3 1 1.00 1 1 0 0 0 0
................................................................................................................................AACCATCTACCTGTCCTGTTT...................................................................................................... 21 2 1 1.00 1 1 0 0 0 0
...............................................................................................................................GAACCATCGACCTGTCCTGT........................................................................................................ 20 2 1 1.00 1 1 0 0 0 0
..............................................................................................................................TGAACCATCTACCTGTCC........................................................................................................... 18 2 2 1.00 2 2 0 0 0 0
..................ATCGATGTTCAGTTCTTTGG..................................................................................................................................................................................................................... 20 2 1 1.00 1 0 0 1 0 0
..............................................................................................................................CGAACCATCTACCTGTCCTGTT....................................................................................................... 22 3 1 1.00 1 1 0 0 0 0
..............................................................................................................................GGAACCATCTACCTGTCCTGTT....................................................................................................... 22 3 1 1.00 1 1 0 0 0 0
...............................................................................................................................GAACCATCGACCTGTCCTGTTTG..................................................................................................... 23 3 1 1.00 1 1 0 0 0 0
...............................................................................................................................GAACCATCAACCTGTCCTGT........................................................................................................ 20 2 1 1.00 1 1 0 0 0 0
.................................................................................................................................ACCATCTACCTGTCCTGTTAG..................................................................................................... 21 3 1 1.00 1 1 0 0 0 0
..............................................................................................................................AGAACCATCTACCTGTCCTGTTG...................................................................................................... 23 3 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................TCTCCATTTATTGCGTGCA................................................... 19 0 1 1.00 1 0 0 0 0 1
................................................................................................................................AACCATCTACCTGTCCTGTTTGG.................................................................................................... 23 3 1 1.00 1 1 0 0 0 0
..............................................................................................................................TGAACCATCTACCTGTCCTGTA....................................................................................................... 22 3 1 1.00 1 0 1 0 0 0
...............................................................................................................................GAACCATCTACCTGTCCTGTCC...................................................................................................... 22 3 1 1.00 1 1 0 0 0 0
.................................................................................................................................ACCATCTACCTGTCCTTTG....................................................................................................... 19 2 1 1.00 1 1 0 0 0 0
...............................................................................................................................GAACCATCTACCTGTCTTGTT....................................................................................................... 21 3 1 1.00 1 1 0 0 0 0
..................................................................................................................................CCATCTACCTGTCCTGTT....................................................................................................... 18 2 6 0.67 4 4 0 0 0 0
...............................................................................................................................TAACCATCTACCTGTCCTGTT....................................................................................................... 21 3 3 0.67 2 2 0 0 0 0
...............................................................................................................................GAACCATCTACCTGTTCTGTT....................................................................................................... 21 3 2 0.50 1 1 0 0 0 0
...............................................................................................................................GAACCATCTACCTGTCCCGTT....................................................................................................... 21 3 2 0.50 1 1 0 0 0 0
...............................................................................................................................GAACCTTCTACCTGTCCTGTT....................................................................................................... 21 3 2 0.50 1 1 0 0 0 0
..............................................................................................................................TGAACCATATACCTGTCCTGT........................................................................................................ 21 3 2 0.50 1 1 0 0 0 0
................................................................................................................................AACCATCTACCTGTCCTTTGG...................................................................................................... 21 3 3 0.33 1 1 0 0 0 0
...............................................................................................................................GAACCATCTACCTGTCCATT........................................................................................................ 20 3 3 0.33 1 1 0 0 0 0
...............................................................................................................................GAGCCATCTACCTGTCCTGTT....................................................................................................... 21 3 3 0.33 1 1 0 0 0 0
...........................................................................................................................CGTTGAACGATCTACCTGTC............................................................................................................ 20 3 3 0.33 1 1 0 0 0 0
..............................................................................................................................TGAACCATGTACCTGTCCTGT........................................................................................................ 21 3 3 0.33 1 1 0 0 0 0
....................................................................................................................................ATCTACCTGTCCTGTTGGTC................................................................................................... 20 3 3 0.33 1 1 0 0 0 0
..............................................................................................................................TGAACCATCTACCCGTCCTGT........................................................................................................ 21 3 3 0.33 1 0 1 0 0 0
..................................................................................................................................CCATCTACCTGTCCTGTTTGT.................................................................................................... 21 3 4 0.25 1 1 0 0 0 0
...............................................................................................................................GAACCATGTACCTGTCCTGTT....................................................................................................... 21 3 4 0.25 1 1 0 0 0 0
................................................................................................................................GACCATCTACCTGTCCTGTT....................................................................................................... 20 3 7 0.14 1 1 0 0 0 0
................................................................................................................................AGCCATCTACCTGTCCTGTT....................................................................................................... 20 3 9 0.11 1 0 0 1 0 0
...................................................................................................................................................TTGACTGTGCCAACCCACC..................................................................................... 19 3 20 0.10 2 0 0 0 2 0
............................................................................................................................GTTGAACCATCTACCTGTC............................................................................................................ 19 3 20 0.10 2 0 1 1 0 0
...................................................................................................................................CATCTACCTGTCCTGTTTGT.................................................................................................... 20 3 15 0.07 1 1 0 0 0 0
..............................................................................................................................................................................................ATTCCGTGCAGGTGGTGGAC......................................... 20 3 16 0.06 1 0 1 0 0 0
............................................................................................................................................................................................................GTGGAGGACAAGTGGGACG............................ 19 3 20 0.05 1 0 0 1 0 0
..............................................................................................................................TGAACCATCTACCTGTCCG.......................................................................................................... 19 3 20 0.05 1 0 0 0 1 0
............................................................................................................................GTTGAACCATCTACCTGTCC........................................................................................................... 20 3 20 0.05 1 0 1 0 0 0

Anti-sense strand reads

ACCAACTAGAAGAGTTATTACCCACAAGTCAAGAAACCACCCTTCAAAAAGTTCACGCAGTTACTTTACCCTCTTAACGACGGTTAATGACACTCATGTGATGTGTGTGAGGGTTATACCTCGTCCTCTTGCTAGATGGACAGGACACACTGACATGTTTGGGTGGGATGAGTATAAAGGAAGAGGTAAATAACGCACGTCCTCCACTTGCTGTTCACCCTGACGTAACTCGTCTTGATGTGCACCTAGTT
**************************************************....((((.((((((....((((((...............(((.(((((...((((((..........(((.(((((((....))).)))))))))))))..))))).....)))...............))))))..))))))))..)).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V111
male body		 V057
head
 M021
embryo
 V050
head
............................................................................................................................CAACTTGGTAGATGGACAGGA.......................................................................................................... 21 3 1 16.00 16 14 0 0 2 0
................................................................................................................................TTGGTAGATGGACAGGACAAC...................................................................................................... 21 3 2 15.50 31 19 8 4 0 0
................................................................................................................................TTGGTAGATGGACAGGAC......................................................................................................... 18 1 1 12.00 12 11 1 0 0 0
...............................................................................................................................CTTGGTAGATGGACAGGACAA....................................................................................................... 21 2 1 9.00 9 5 4 0 0 0
..............................................................................................................................ACTTGGTAGATGGACAGGACA........................................................................................................ 21 2 1 8.00 8 5 2 1 0 0
................................................................................................................................TTGGTAGATGGACAGGACAA....................................................................................................... 20 2 1 8.00 8 6 2 0 0 0
.............................................................................................................................CACTTGGTAGATGGACAGGAC......................................................................................................... 21 2 1 7.00 7 6 1 0 0 0
.................................................................................................................................TGGTAGATGGACAGGACAACC..................................................................................................... 21 3 3 3.67 11 5 6 0 0 0
..............................................................................................................................ACTTGGTAGATGGACAGGAC......................................................................................................... 20 2 1 3.00 3 2 1 0 0 0
...............................................................................................................................CTTGGTAGATGGACAGGAC......................................................................................................... 19 1 1 3.00 3 3 0 0 0 0
.............................................................................................................................AACTTGGTAGATGGACAGGAC......................................................................................................... 21 3 2 2.50 5 4 0 1 0 0
...........................................................................................................................ACCACTTGGTAGATGGACAGGAC......................................................................................................... 23 3 1 2.00 2 2 0 0 0 0
..............................................................................................................................CCTTGGTAGATGGACAGGACA........................................................................................................ 21 2 1 2.00 2 1 0 1 0 0
............................................................................................................................CCACTTGGTAGATGGACAGGAC......................................................................................................... 22 2 1 2.00 2 2 0 0 0 0
............................................................................................................................CAACTTGGTAGATGGACAGGAC......................................................................................................... 22 3 1 2.00 2 1 0 0 1 0
.................................................................................................................................TGGTAGATGGACAGGACA........................................................................................................ 18 1 1 2.00 2 2 0 0 0 0
............................................................................................................................CCACTTGGTAGATGGACAGGA.......................................................................................................... 21 2 1 1.00 1 1 0 0 0 0
...............................................................................................................................CTTGGTAGATGGACAGGACAAC...................................................................................................... 22 3 1 1.00 1 1 0 0 0 0
............................................................................................................................CCACTTGGTAGACGGACAGGAC......................................................................................................... 22 3 1 1.00 1 0 0 1 0 0
.............................................................................................................................AACTTGGTAGATGGACAGGACA........................................................................................................ 22 3 1 1.00 1 1 0 0 0 0
.............................................................................................................................CACTTGGTAGATGGACAGGA.......................................................................................................... 20 2 1 1.00 1 1 0 0 0 0
................................................................................................................................TTGGTAGATGGACAGGACAACC..................................................................................................... 22 3 1 1.00 1 1 0 0 0 0
...............................................................................................................................CTTGGTAGATGGCCAGGACAA....................................................................................................... 21 3 1 1.00 1 1 0 0 0 0
...........................................................................................................................TCAACTTGGTAGATGGACAGGA.......................................................................................................... 22 3 1 1.00 1 1 0 0 0 0
..............................................................................................................................CCTTGGTAGATGGACAGGACAA....................................................................................................... 22 3 1 1.00 1 1 0 0 0 0
...............................................................................................................................CTTGGTAGATGGACAGGA.......................................................................................................... 18 1 1 1.00 1 1 0 0 0 0
.................................................................................................................................TGGTAGATGGACAGGACAA....................................................................................................... 19 2 2 0.50 1 0 1 0 0 0
....................................................................................................................................TAGATGGACAGGACAACC..................................................................................................... 18 2 2 0.50 1 1 0 0 0 0
............................................................................................................................CCACTTGGTAGATGGACAGTAC......................................................................................................... 22 3 2 0.50 1 1 0 0 0 0
.................................................................................................................................TGGTAGATGGACAGGACAAC...................................................................................................... 20 3 10 0.40 4 2 1 0 0 1
...........................................................................................................................ACCACTTGGTAGATGGACAG............................................................................................................ 20 3 3 0.33 1 1 0 0 0 0
.............................................................................................................................AACTTGGTAGATGGACAGGA.......................................................................................................... 20 3 3 0.33 1 1 0 0 0 0
..................................................................................................................................GGTAGATGGACAGGACAACC..................................................................................................... 20 3 10 0.30 3 2 1 0 0 0
..............................................................................................................................................................TTTGGCGGGATGTGTATAAA......................................................................... 20 3 7 0.29 2 0 1 0 1 0
...............................................................................................................................CTTGCTAGACGGGCAGGACAA....................................................................................................... 21 3 4 0.25 1 0 0 1 0 0
................................................................................................................................TTGGTAGATGTACAGGAC......................................................................................................... 18 2 7 0.14 1 1 0 0 0 0
..................................................................................................................................GGTAGATGGACAGGACAAC...................................................................................................... 19 3 20 0.10 2 0 2 0 0 0
................................................................................................................................TTGGTAGGTGGACAGGAC......................................................................................................... 18 2 10 0.10 1 0 1 0 0 0
...............................................................................................................................................................TTGGCGGGATGTGTATAAA......................................................................... 19 3 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_2:2072076-2072326 + dpe_1024 TGGTTGATCTTCTCAATAATGGGTGTTCAGTTCTTTGGTGGGAAGTTTTTCAAGTGCGTCAATGAAATGGGAGAATTGCTGCCAATTACTGTGAGTACACT--ACA-------------------CACACTCCCAATATGGA----------------------GCAGGAGAAC-----------------------------------------------------------------------------------------------------GATCTACCTGTCCTGTGTGACTGTACAAACCCACCCTACTCATATTTCCTTCTCC---------------------------------------------A------TTTA--TTGCGTGCAGGAGGTGAACGACAAGTGGGACTGCATTGAGCAGAACTACACGTGGATCAA
dp5 3:1889305-1889555 + dps_955 TGGTTGATCTTCTCAATAATGGGTGTTCAGTTCTTTGGTGGGAAGTTTTTCAAGTGCGTCAATGAAATGGGAGAATTGCTGCCAATTACTGTGAGTACACT--ACA-------------------CACACTCCCAATATGGA----------------------GCAGGAGAAC-----------------------------------------------------------------------------------------------------GATCTACCTGTCCTGTGTGACTGTACAAACCCACCCTACTCATATTTCCTTCTCC---------------------------------------------A------TTTA--TTGCGTGCAGGAGGTGAACGACAAGTGGGACTGCATTGAGCAGAACTACACGTGGATCAA
droWil2 scf2_1100000004510:1829952-1830208 + TGGTTAATATTCTCCATAATGGGTGTACAATTTTTTGGTGGTAAATTTTTCAAATGCGTCAATGAAATCGGCGAATTGCTGCCAATTACCGTGAGTAAC-------------------------------------------GAA-----------------------------------------------------CCCAA-----AACAAACCTAAATTTAAACTAAATTCATATTGAAAAAGAAAATTTTTCAAAATTAATTTTAAATGACAAACAAATTATAATTTGTAA----------------------------------------------------------------------------------------TAA--TTTTATGTAGGAGGTGAACGATAAATGGGATTGCATTGAACAAAACTATACATGGATCAA
droVir3 scaffold_12823:2398144-2398382 + dvi_3172 TGGTTAATTTTCTCAATAATGGGTGTACAATTCTTTGGTGGTAAATTTTTCAAATGCGTCAATGAATTGGGCGAATTGCTGCCAATTACTGTAAGTATGCC--GAA-------------------CAGACC------------------------GCCCCAA--GCAGGCGA---------------AT---------CCCAAT---TAC-----------------CCAA-CCACATTGCCCAA------------------GCTC------------------------------------------------------------------------------------C-------AATTAATATGTTTTCCA------TTTGC--AACTTACAGGAGGTCAACGATAAGTGGGACTGCATCGAGCAGAACTACACGTGGATCAA
droMoj3 scaffold_6496:1757946-1758190 + TGGTTAATTTTCTCAATAATGGGTGTACAATTCTTTGGTGGTAAATTTTTCAAATGCGTCAATGAGTTGGGCGAATTGCTGCCGATTACTGTAAGTATGCC--AA------------------------------------------------AACCCAGATCA-----------GGAT--------------------------------------------------------------------------------------------------------------C-------------------TGTAATTATATCTTCCTCTGCATATACATAGATCGGAAGTTTG-------ATATAATATATTTTCCT------TTGGCTCTCCTTGTAGGAGGTCAACGATAAATGGGATTGCATTGAGCAAAACTATACGTGGATCAA
droGri2 scaffold_15245:15676066-15676310 - TGGTTGATTTTCTCAATAATGGGTGTGCAATTCTTTGGTGGTAAATTTTTCAAATGCATCAATGAATTGGGCGAGTTGCTGCCAATTACTGTAAGTATGCC--AAG-------------------AAAACCATAAAAAAAAA----------------------GAAAGAAAAATAGCAT---CTCTATTAGAAACCTC--------TCA-----------------------------------------------------ATTT------------------------------------------------------------------------------------GACTTG--AATTAATATA----C--GTTTTGTTAATT----TTACAGGAAGTAAACGATAAATGGGATTGCATTGAGCAGAACTACACGTGGATCAA
droAna3 scaffold_13266:12088166-12088398 + TGGTTGATCTTCTCAATAATGGGTGTTCAGTTTTTTGGTGGTAAATTTTTCAAGTGCGTCAATGAGTTGGGCGAGTTGCTGCCCATCACTGTAAGTAGTCCCTGG-ACACGGGATCCTTCCTTCCAGGATC-----------CGACACCCGCCCGCCCA--------------------------------------------------------------------------------------------------------GCTC------------------------------------------------------------------------------------CACCTGACCACTAA-----------TCCCTG--AATA--CTTCGCAGGAGGTGAACGACAAGTGGGACTGCATCGAGCAGAACTACACCTGGATCAA
droBip1 scf7180000396547:391019-391247 - TGGTTGATCTTCTCAATAATGGGTGTTCAGTTTTTTGGTGGTAAATTTTTCAAGTGCGTCAATGAGTTGGGCGAGTTGCTGCCCATCACCGTAAGTAGTCCCTGG-ACCCAGGATCCTTCCTGC------C-----------CGATAACCGCCCC-------------------------------------------C-CCA-----CG-----------------------------------------------------GCTC------------------------------------------------------------------------------------CACTTGACCACTAA-----------TCCCCG--ACTA--CTTCGCAGGAGGTGAACGACAAGTGGGACTGCATCGAACAGAACTACACCTGGATCAA
droKik1 scf7180000302366:938596-938809 + TGGTTGATCTTCTCCATAATGGGTGTTCAGTTCTTTGGTGGTAAATTTTTCAAGTGCGTCAACGAGCTGGGCGAGTTGCTGCCAATTACTGTGAGTATTCT--GG-A------------------AGGATT-----------GGA--------TTCTTGGTTAC-----------T--TT------CCT---------GCC----------------------------------------------------------------------------------------------------------------------------------------------TTTACT--------TATACCTG------C----TTGCTT--GGCT----TGGCAGGAGGTGAACGACAAGTGGGACTGCATCGAGCAGAACTACACGTGGATCAA
droFic1 scf7180000453858:698074-698296 - TGGTTGATCTTCTCAATAATGGGTGTTCAGTTCTTTGGTGGTAAATTTTTCAAGTGCGTTAATGAGATGGGCGAGCTACTGCCGATTACTGTGAGTATCTT-T--------------------GG-----C-----------GGA--------GATGCAGCTCC-----------AGTTGCAGCTCCATTACCGGTCCC------------------------------------------------------------------------------------------------------------------------------------------------CCGGAA--------GAAACTAA-----------TCCCTG--CTAA----TTCTAGGAGGTGAACGACAAGTGGGACTGCATCGAGCAGAACTACACGTGGATCAA
droEle1 scf7180000491214:2179619-2179831 + TGGTTGATCTTCTCAATAATGGGTGTTCAGTTCTTTGGTGGTAAATTTTTCAAGTGCGTCAATGAGATGGGCGAATTGCTGCCGATAACTGTGAGTAG----------------------------------------------AT-------GTCTGCGATGT-----------AGCTT------T------------CCAATCTCCCA-------------------------------------------------------------------T--------------------------------------------------------------CATTGAAAT--------CGTGCTAA-----------TTTATGT-TGAA----TTTCAGGAGGTGAACGACAAGTGGGACTGCATCGAGCAGAACTACACGTGGATCAA
droRho1 scf7180000779661:33644-33860 - -GGTTGATCTTCTCAATAATGGGTGTTCAGTTCTTTGGTGGTAAATTTTTCAAGTGCGTCAATGAGATGGGCGAGTTACTGCCGATAACTGTGAGTACTTTTC--------------------GG-----C-----------AGA--------AGTTCAGATGC-----------AGCTC------CAT---------CTC------CCA-------------------------------------------------------------------T--------------------------------------------------------------CTCTGGGAT--------TATACTAA-----------TCTATG--CGAA----TTCCAGGAGGTCAACGACAAATGGGACTGCATCGAGCAGAACTATACGTGGATAAA
droBia1 scf7180000301754:5765455-5765677 + TGGTTGATCTTCTCAATAATGGGTGTTCAGTTCTTTGGTGGTAAATTTTTCAAGTGCGTTAATGAGATGGGCGAGTTACTGCCGATTACTGTGAGTATTCTTG--------------------GG-----C-----------GGA--------GATTCAGATGC-----------AGCTC------CAC---------CCCGA-----AA-----------------------------------------------------GGTG----------C--------------------------------------------------------------ACTTGGCAT--------ATTACTAA-----------CCAATG--CGTA----TTCCAGGAGGTGAACGACAAGTGGGACTGCATCGAACAGAACTACACATGGATCAA
droTak1 scf7180000415805:424052-424272 - TGGTTGATCTTCTCAATAATGGGTGTTCAGTTCTTTGGTGGTAAATTTTTCAAGTGCGTTAATGAGATGGGCGAGTTGCTGCCGATTACTGTGAGTATTTT-----------------TCCTTGG-----G-----------GGA--------GAGTCAGATGA-----------AGCTC------CAC---------C-CAA-----CA-------------------------------------------------------------------G--------------------------------------------------------------ACCGAGCAT--------TTAACTAA-----------TCTATT--CGAA----TTCCAGGAGGTGAACGACAAGTGGGACTGCATCGAACAGAACTACACATGGATAAA
droEug1 scf7180000409464:1161669-1161884 + TGGTTGATCTTCTCAATAATGGGTGTTCAGTTCTTTGGTGGTAAATTTTTCAAATGCGTCAATGAGATGGGCGAGTTGCTGCCGATTACTGTAAGTACTTT-A--------------------GG-----A-----------GGA--------GATGCGGATGC-----------AGCTT------CTC---------T----T---CCA-------------------------------------------------------------------C--------------------------------------------------------------TCCTGGAAC--------TTTACCAA-----------TCTGTA--TGTA----TTGCAGGAGGTGAACGACAAGTGGGACTGCATCGAGCAGAACTACACATGGATCAA
dm3 chr2R:20799607-20799825 + TGGTTGATCTTCTCAATAATGGGTGTTCAGTTCTTTGGTGGTAAATTTTTTAAGTGCGTTAATGAGATGGGCGAGCTACTGCCGATTACTGTAAGTATTCT----------------------GG-----T-----------GGA--------TGTTCAGATGC-----------AGCTT------CAC---------ATCAAT---CAA-------------------------------------------------------------------C--------------------------------------------------------------ACCTGAGAT--------ATTATTAA-----------TCATTT--CATA----TTCCAGGAGGTTAACGACAAGTGGGACTGCATCGAACAGAACTACACGTGGATTAA
droSim2 2r:21262350-21262568 + TGGTTGATCTTCTCAATAATGGGTGTTCAGTTCTTTGGTGGTAAATTTTTTAAGTGCGTTAATGAGATGGGCGAGCTACTGCCGATTACTGTAAGTATTCT----------------------GG-----T-----------GGA--------TGTTCAGATGC-----------AGCTT------CAT---------ACCAAT---TAA-------------------------------------------------------------------C--------------------------------------------------------------ACCTGAGAT--------ATTATTAA-----------TTATTT--CATA----TTCCAGGAGGTTAACGACAAGTGGGACTGCATCGAACAGAACTACACGTGGATTAA
droSec2 scaffold_23:656615-656833 + TGGTTGATCTTCTCAATAATGGGTGTTCAGTTCTTTGGTGGTAAATTTTTTAAGTGCGTTAATGAGATGGGCGAGCTACTGCCGATTACTGTAAGTATTCT----------------------GG-----T-----------GGA--------TGTTCAGATGC-----------AGCTT------CAT---------ACCAAT---TAA-------------------------------------------------------------------C--------------------------------------------------------------ACCTGAGAT--------ATTATTAA-----------TCATTT--CATA----TTCCAGGAGGTTAACGACAAGTGGGACTGCATCGAACAGAACTACACGTGGATTAA
droYak3 2R:20763049-20763267 + TGGTTGATCTTCTCAATAATGGGTGTTCAGTTCTTTGGTGGTAAATTTTTTAAGTGCGTTAATGAGATGGGCGAGCTACTGCCGATTACTGTAAGTATTCC----------------------GG-----T-----------GAA--------TGTTCAGATGC-----------AGCCA------CGC---------ACCAAT---CAA-------------------------------------------------------------------C--------------------------------------------------------------ATTTGGGAT--------ATTAATAA-----------TCATTG--CATA----TTCCAGGAGGTGAACGACAAGTGGGACTGCATCGAACAGAACTACACGTGGATTAA
droEre2 scaffold_4845:22169673-22169891 + TGGTTGATCTTCTCAATAATGGGTGTTCAGTTCTTTGGTGGTAAATTTTTTAAGTGCGTTAATGAGATGGGCGAGCTACTGCCGATTACTGTAAGTATTCT----------------------GG-----T-----------GGA--------TGCTCAGATGC-----------AGTTG------CAC---------ACCAAT---CAA-------------------------------------------------------------------C--------------------------------------------------------------ACCGGGGAT--------ATTATTAA-----------TCATTG--CATA----TTCCAGGAGGTAAACGACAAGTGGGACTGCATCGAACAGAACTACACGTGGATCAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
TGGTTGATCTTCTCAATAATGGGTGTTCAGTTCTTTGGTGGGAAGTTTTTCAAGTGCGTCAATGAAATGGGAGAATTGCTGCCAATTACTGTGAGTACACT--ACA-------------------CACACTCCCAATATGGA----------------------GCAGGAGAAC-----------------------------------------------------------------------------------------------------GATCTACCTGTCCTGTGTGACTGTACAAACCCACCCTACTCATATTTCCTTCTCC---------------------------------------------A------TTTA--TTGCGTGCAGGAGGTGAACGACAAGTGGGACTGCATTGAGCAGAACTACACGTGGATCAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................................................................................................................................................................................................................................TCTCC---------------------------------------------A------TTTA--TTGCGTGCA...................................................1911.001001000
dp5
TGGTTGATCTTCTCAATAATGGGTGTTCAGTTCTTTGGTGGGAAGTTTTTCAAGTGCGTCAATGAAATGGGAGAATTGCTGCCAATTACTGTGAGTACACT--ACA-------------------CACACTCCCAATATGGA----------------------GCAGGAGAAC-----------------------------------------------------------------------------------------------------GATCTACCTGTCCTGTGTGACTGTACAAACCCACCCTACTCATATTTCCTTCTCC---------------------------------------------A------TTTA--TTGCGTGCAGGAGGTGAACGACAAGTGGGACTGCATTGAGCAGAACTACACGTGGATCAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................................................................................................................................................................TTA--TTGCGTGCAGGAGGT.............................................1811.0010100000000
droWil2
TGGTTAATATTCTCCATAATGGGTGTACAATTTTTTGGTGGTAAATTTTTCAAATGCGTCAATGAAATCGGCGAATTGCTGCCAATTACCGTGAGTAAC-------------------------------------------GAA-----------------------------------------------------CCCAA-----AACAAACCTAAATTTAAACTAAATTCATATTGAAAAAGAAAATTTTTCAAAATTAATTTTAAATGACAAACAAATTATAATTTGTAA----------------------------------------------------------------------------------------TAA--TTTTATGTAGGAGGTGAACGATAAATGGGATTGCATTGAACAAAACTATACATGGATCAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................................................................................................TATAATTTGTAA----------------------------------------------------------------------------------------TAA--TTTTATG.....................................................2212.00220000
droVir3
TGGTTAATTTTCTCAATAATGGGTGTACAATTCTTTGGTGGTAAATTTTTCAAATGCGTCAATGAATTGGGCGAATTGCTGCCAATTACTGTAAGTATGCC--GAA-------------------CAGACC------------------------GCCCCAA--GCAGGCGA---------------AT---------CCCAAT---TAC-----------------CCAA-CCACATTGCCCAA------------------GCTC------------------------------------------------------------------------------------C-------AATTAATATGTTTTCCA------TTTGC--AACTTACAGGAGGTCAACGATAAGTGGGACTGCATCGAGCAGAACTACACGTGGATCAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................GGGACTGCATCGAGCAGAACTACACGT.......2711.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TGGGACTGCATCGAGCAGAACTACACGT.......2811.001000000000000000000000000001000000000000000000000000000000000000
...................................................................TGGGCGAATTGCTGCCAATTACTGAGG..................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000010000000000000000000000000000000000000
................TAATGGGTGTACAATTCTTTGGTG........................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000001000000000000000000000000000000000000000000000000000000
..........TCTCAATAATGGGTGTACAATTCTTT............................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.........................................TAAATTTTTCAAATGCGTCAATGAAT.............................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................GATAAGTGGGACTGCATCGAGCAGA................2511.001000000000000000000000000000000000000000000000000000000000001000
..............................................................TGAATTGGGCGAATTGCTGCCAAT..........................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000001000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTGGGACTGCATCGAGCAGA................2311.001000000000010000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................GACTGCATCGAGCAGAACTACACGTGGAT...2911.001000000000000000000000000010000000000000000000000000000000000000
droMoj3
TGGTTAATTTTCTCAATAATGGGTGTACAATTCTTTGGTGGTAAATTTTTCAAATGCGTCAATGAGTTGGGCGAATTGCTGCCGATTACTGTAAGTATGCC--AA------------------------------------------------AACCCAGATCA-----------GGAT--------------------------------------------------------------------------------------------------------------C-------------------TGTAATTATATCTTCCTCTGCATATACATAGATCGGAAGTTTG-------ATATAATATATTTTCCT------TTGGCTCTCCTTGTAGGAGGTCAACGATAAATGGGATTGCATTGAGCAAAACTATACGTGGATCAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
TGGTTGATTTTCTCAATAATGGGTGTGCAATTCTTTGGTGGTAAATTTTTCAAATGCATCAATGAATTGGGCGAGTTGCTGCCAATTACTGTAAGTATGCC--AAG-------------------AAAACCATAAAAAAAAA----------------------GAAAGAAAAATAGCAT---CTCTATTAGAAACCTC--------TCA-----------------------------------------------------ATTT------------------------------------------------------------------------------------GACTTG--AATTAATATA----C--GTTTTGTTAATT----TTACAGGAAGTAAACGATAAATGGGATTGCATTGAGCAGAACTACACGTGGATCAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
TGGTTGATCTTCTCAATAATGGGTGTTCAGTTTTTTGGTGGTAAATTTTTCAAGTGCGTCAATGAGTTGGGCGAGTTGCTGCCCATCACTGTAAGTAGTCCCTGG-ACACGGGATCCTTCCTTCCAGGATC-----------CGACACCCGCCCGCCCA--------------------------------------------------------------------------------------------------------GCTC------------------------------------------------------------------------------------CACCTGACCACTAA-----------TCCCTG--AATA--CTTCGCAGGAGGTGAACGACAAGTGGGACTGCATCGAGCAGAACTACACCTGGATCAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TGGTTGATCTTCTCAATAATGGGTGTTCAGTTTTTTGGTGGTAAATTTTTCAAGTGCGTCAATGAGTTGGGCGAGTTGCTGCCCATCACCGTAAGTAGTCCCTGG-ACCCAGGATCCTTCCTGC------C-----------CGATAACCGCCCC-------------------------------------------C-CCA-----CG-----------------------------------------------------GCTC------------------------------------------------------------------------------------CACTTGACCACTAA-----------TCCCCG--ACTA--CTTCGCAGGAGGTGAACGACAAGTGGGACTGCATCGAACAGAACTACACCTGGATCAASizeHit CountTotal NormTotal
No Reads
droKik1
TGGTTGATCTTCTCCATAATGGGTGTTCAGTTCTTTGGTGGTAAATTTTTCAAGTGCGTCAACGAGCTGGGCGAGTTGCTGCCAATTACTGTGAGTATTCT--GG-A------------------AGGATT-----------GGA--------TTCTTGGTTAC-----------T--TT------CCT---------GCC----------------------------------------------------------------------------------------------------------------------------------------------TTTACT--------TATACCTG------C----TTGCTT--GGCT----TGGCAGGAGGTGAACGACAAGTGGGACTGCATCGAGCAGAACTACACGTGGATCAASizeHit CountTotal NormTotal
No Reads
droFic1
TGGTTGATCTTCTCAATAATGGGTGTTCAGTTCTTTGGTGGTAAATTTTTCAAGTGCGTTAATGAGATGGGCGAGCTACTGCCGATTACTGTGAGTATCTT-T--------------------GG-----C-----------GGA--------GATGCAGCTCC-----------AGTTGCAGCTCCATTACCGGTCCC------------------------------------------------------------------------------------------------------------------------------------------------CCGGAA--------GAAACTAA-----------TCCCTG--CTAA----TTCTAGGAGGTGAACGACAAGTGGGACTGCATCGAGCAGAACTACACGTGGATCAASizeHit CountTotal NormTotal
No Reads
droEle1
TGGTTGATCTTCTCAATAATGGGTGTTCAGTTCTTTGGTGGTAAATTTTTCAAGTGCGTCAATGAGATGGGCGAATTGCTGCCGATAACTGTGAGTAG----------------------------------------------AT-------GTCTGCGATGT-----------AGCTT------T------------CCAATCTCCCA-------------------------------------------------------------------T--------------------------------------------------------------CATTGAAAT--------CGTGCTAA-----------TTTATGT-TGAA----TTTCAGGAGGTGAACGACAAGTGGGACTGCATCGAGCAGAACTACACGTGGATCAASizeHit CountTotal NormTotal
No Reads
droRho1
-GGTTGATCTTCTCAATAATGGGTGTTCAGTTCTTTGGTGGTAAATTTTTCAAGTGCGTCAATGAGATGGGCGAGTTACTGCCGATAACTGTGAGTACTTTTC--------------------GG-----C-----------AGA--------AGTTCAGATGC-----------AGCTC------CAT---------CTC------CCA-------------------------------------------------------------------T--------------------------------------------------------------CTCTGGGAT--------TATACTAA-----------TCTATG--CGAA----TTCCAGGAGGTCAACGACAAATGGGACTGCATCGAGCAGAACTATACGTGGATAAASizeHit CountTotal NormTotal
No Reads
droBia1
TGGTTGATCTTCTCAATAATGGGTGTTCAGTTCTTTGGTGGTAAATTTTTCAAGTGCGTTAATGAGATGGGCGAGTTACTGCCGATTACTGTGAGTATTCTTG--------------------GG-----C-----------GGA--------GATTCAGATGC-----------AGCTC------CAC---------CCCGA-----AA-----------------------------------------------------GGTG----------C--------------------------------------------------------------ACTTGGCAT--------ATTACTAA-----------CCAATG--CGTA----TTCCAGGAGGTGAACGACAAGTGGGACTGCATCGAACAGAACTACACATGGATCAASizeHit CountTotal NormTotal
No Reads
droTak1
TGGTTGATCTTCTCAATAATGGGTGTTCAGTTCTTTGGTGGTAAATTTTTCAAGTGCGTTAATGAGATGGGCGAGTTGCTGCCGATTACTGTGAGTATTTT-----------------TCCTTGG-----G-----------GGA--------GAGTCAGATGA-----------AGCTC------CAC---------C-CAA-----CA-------------------------------------------------------------------G--------------------------------------------------------------ACCGAGCAT--------TTAACTAA-----------TCTATT--CGAA----TTCCAGGAGGTGAACGACAAGTGGGACTGCATCGAACAGAACTACACATGGATAAASizeHit CountTotal NormTotal
No Reads
droEug1
TGGTTGATCTTCTCAATAATGGGTGTTCAGTTCTTTGGTGGTAAATTTTTCAAATGCGTCAATGAGATGGGCGAGTTGCTGCCGATTACTGTAAGTACTTT-A--------------------GG-----A-----------GGA--------GATGCGGATGC-----------AGCTT------CTC---------T----T---CCA-------------------------------------------------------------------C--------------------------------------------------------------TCCTGGAAC--------TTTACCAA-----------TCTGTA--TGTA----TTGCAGGAGGTGAACGACAAGTGGGACTGCATCGAGCAGAACTACACATGGATCAASizeHit CountTotal NormTotal
No Reads
dm3
TGGTTGATCTTCTCAATAATGGGTGTTCAGTTCTTTGGTGGTAAATTTTTTAAGTGCGTTAATGAGATGGGCGAGCTACTGCCGATTACTGTAAGTATTCT----------------------GG-----T-----------GGA--------TGTTCAGATGC-----------AGCTT------CAC---------ATCAAT---CAA-------------------------------------------------------------------C--------------------------------------------------------------ACCTGAGAT--------ATTATTAA-----------TCATTT--CATA----TTCCAGGAGGTTAACGACAAGTGGGACTGCATCGAACAGAACTACACGTGGATTAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................TAATGAGATGGGCGAGCTACTGCCGAT..........................................................................................................................................................................................................................................................................................................................................................................27131.003100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000001000001000000000000000000000000000000000000000000000000000000000000000000000000000200000000000001100000001012100000
..................................................TAAGTGCGTTAATGAGATGGGCGAGC....................................................................................................................................................................................................................................................................................................................................................................................26128.00280000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000010000000000000000000000000000000000000000000000000000000000000000000021070000020000000000000000132800000
..............................................TTTTTAAGTGCGTTAATGAGATGGGC........................................................................................................................................................................................................................................................................................................................................................................................26116.001600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000001011000000
.................................................TTAAGTGCGTTAATGAGATGGGCGAGC....................................................................................................................................................................................................................................................................................................................................................................................27113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000100020000000000000000000000001600000
......................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGAACAGAACTACACGTGGAT...23113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000600700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................AATGAGATGGGCGAGCTACTGCCGAT..........................................................................................................................................................................................................................................................................................................................................................................26111.00110000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000001000000000100000000000000000000000010000010500000
.............................................TTTTTTAAGTGCGTTAATGAGATGGGC........................................................................................................................................................................................................................................................................................................................................................................................27111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000011700000
..........................................................TTAATGAGATGGGCGAGCTACTGCCGAT..........................................................................................................................................................................................................................................................................................................................................................................28110.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...............................................TTTTAAGTGCGTTAATGAGATGGGC........................................................................................................................................................................................................................................................................................................................................................................................2519.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000900000
...........................................................TAATGAGATGGGCGAGCTACTGCCGA...........................................................................................................................................................................................................................................................................................................................................................................2618.0080000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000100000000000000000000001000000000000010000000000100200000
..............................................................TGAGATGGGCGAGCTACTGCCGAT..........................................................................................................................................................................................................................................................................................................................................................................2418.0080000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001500000
..................................................................................................................................................................................................................................................................................................................................................................................................................TTAACGACAAGTGGGACTGC..........................2017.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TAATGGGTGTTCAGTTCTTTGGTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000010200000
.............................................................ATGAGATGGGCGAGCTACTGCCGAT..........................................................................................................................................................................................................................................................................................................................................................................2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010500000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TGCATCGAACAGAACTACACGTGGAT...2615.0050000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000020000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................TTTTTTAAGTGCGTTAATGAGATGGG.........................................................................................................................................................................................................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001200000
......................................................TGCGTTAATGAGATGGGCGAGCTAC.................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................CGAACAGAACTACACGTGGAT...2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGGGTGTTCAGTTCTTTGGTG........................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TTTGGTGGTAAATTTTTTAAGTGCGT.....................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001200000
....................................................................................................................................................................................................................................................................................................................................................................................................................AACGACAAGTGGGACTGCATCGAACAGAA...............2913.0030000000000000000000000000000000000000000000000000000000000000000000000000000002010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TAATGAGATGGGCGAGCTACTGCCG............................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGGACTGCATCGAACA..................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000100000000000
.........................................TAAATTTTTTAAGTGCGTTAATGAGA.............................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................ATGGGCGAGCTACTGCCGATTACTGA....................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................TAACGACAAGTGGGACTGCATCGAACAGA................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................TTTAAGTGCGTTAATGAGATGGGCGAGC....................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................................................................................................GGTTAACGACAAGTGGGACTG...........................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TAATGAGATGGGCGAGCTACTG...............................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
......................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGAACAGAACTACACGTGG.....2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TTAATGAGATGGGCGAGCTACTGCCGA...........................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TAACGACAAGTGGGACTGCATCGAA....................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................TAATGGGTGTTCAGTTCTTTGGTGGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
..............................................TTTTTAAGTGCGTTAATGAGATGGG.........................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGAACAGAACTACACGT.......1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TATTAA-----------TCATTT--CATA----TTCCAG..................................................2212.0020000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................TGTAAGTATTCT----------------------GG-----T-----------GGA--------T......................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................TTATTAA-----------TCATTT--CATA----TTCCAG..................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........................................................TTAATGAGATGGGCGAGCTACTG...............................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................TTCAGTTCTTTGGTGGTAAATTT................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTGGGACTGCATCGAACAGAACTA............2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000100000000
..................................TTGGTGGTAAATTTTTTAAGTGCGTT....................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGGACTGCATCGAACAGAACTACA..........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................GTAAGTATTCT----------------------GG-----T-----------GGA--------T......................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
.....................................................................................TTACTGTAAGTATTCT----------------------GG-----T-----------GG................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................AATGAGATGGGCGAGCTACTGCCGA...........................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
..........................................................................GCTACTGCCGATTACTGA....................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................TTTAAGTGCGTTAATGAGATGGGCG.......................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................TTTGGTGGTAAATTTTTTAAGTGCG......................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AATGGGTGTTCAGTTCTTTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TGCATCGAACAGAACTACACGT.......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
................................................TTTAAGTGCGTTAATGAGATGGGC........................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.............CAATAATGGGTGTTCAGTTCT..............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................TAAATTTTTTAAGTGCGTTAATGAG..............................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................GTATTCT----------------------GG-----T-----------GGA--------TGTTCAGA...............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGGGTGTTCAGTTCTTTGGTGGTAAAT..................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................GCGTTAATGAGATGGGCGAGC....................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................TTAACGACAAGTGGGACTGCATCGAACAGA................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................GGTAAATTTTTTAAGTGCGTT....................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................TGCGTTAATGAGATGGGCGAG.....................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
............TCAATAATGGGTGTTCAGTTCTTTGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTGGGACTGCATCGAA....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................GGTTAACGACAAGTGGGACTGCATC.......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
................TAATGGGTGTTCAGTTCTTTGGTG........................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCATCGAACAGAACTACACGTGGA....2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............ATAATGGGTGTTCAGTTCTTTGGTGGT......................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............ATAATGGGTGTTCAGTTCTTTGGTG........................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TTAACGACAAGTGGGACTGCA.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TTCTCAATAATGGGTGTTCAGTTCTTTGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................TTTTAAGTGCGTTAATGAGATGGGCGA......................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................AAGTGCGTTAATGAGATGGGC........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................TAAGTGCGTTAATGAGATGGGCGAG.....................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................AAGTGCGTTAATGAGATGG..........................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................TTTAAGTGCGTTAATGAGATG...........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................TGCGTTAATGAGATGGGCGAGCTACTGC..............................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................GACTGCATCGAACAGAACTACACGTGGAT...2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TTAATGAGATGGGCGAGCTACTGCCGAG..........................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................TTTAAGTGCGTTAATGAGATGG..........................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................ATGGGCGAGCTACTGCCGATTACTGAG...................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..........................................................................................GTAAGTATTCT----------------------GG-----T-----------GGA--------TGTT...................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....................................................AGTGCGTTAATGAGATGGGCGAGCTACT................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGGACTGCATCGAACAGAACTA............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...........................................................................CTACTGCCGATTACTGTAAGT................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTGGGACTGCATCGAACAGAAC..............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TCAATAATGGGTGTTCAGTTCTTTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TTCTCAATAATGGGTGTTCAGTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................ATGGGTGTTCAGTTCTTTGGTGGTAAA...................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................TTAAGTGCGTTAATGAGATGGG.........................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...............................................TTTTAAGTGCGTTAATGAGAT............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................ATGGGTGTTCAGTTCTTTGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
............................................................................................................................G-----T-----------GGA--------TGTTCAGATGC-----------AGCTT------......................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..........................................................TTAATGAGATGGGCGAGCTACTGC..............................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................TTAACGACAAGTGGGACTG...........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................TTAAGTGCGTTAATGAGATGGGCGA......................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................TAATGGGTGTTCAGTTCTTTG...........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...................TGGGTGTTCAGTTCTTTGGTGGTAAATT.................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................TCTTTGGTGGTAAATTTTTTAAGTGCGT.....................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCATCGAACAGAACTACACGTGGAT...2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................T----------------------GG-----T-----------GGA--------TGTTCAGATGC-----------AGC..............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................GACTGCATCGAACAGAACTACACGT.......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CTCAATAATGGGTGTTCAGTT................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAACAGAACTACACGTGGAT...2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGAACTACACGTGGATT..2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TGGTTGATCTTCTCAATAATGGGTGTTCAGTTCTTTGGTGGTAAATTTTTTAAGTGCGTTAATGAGATGGGCGAGCTACTGCCGATTACTGTAAGTATTCT----------------------GG-----T-----------GGA--------TGTTCAGATGC-----------AGCTT------CAT---------ACCAAT---TAA-------------------------------------------------------------------C--------------------------------------------------------------ACCTGAGAT--------ATTATTAA-----------TTATTT--CATA----TTCCAGGAGGTTAACGACAAGTGGGACTGCATCGAACAGAACTACACGTGGATTAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................................................................................................................................................................................................................................................................TTAACGACAAGTGGGACTGCATCGAAC...................2713.00300000010000011000
..................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCATCGAACAGAACTACACGTGGAA...2712.00200000000000002000
..................................................................................................................................................................................................................................................................................................................................................................................................................TTAACGACAAGTGGGACTGCATCGAA....................2611.00100000000000001000
................................................................................................................................................................................................................................................................................................................................................................................................................GGTTAACGACAAGTGGGACTGCATC.......................2511.00100000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................................................TAACGACAAGTGGGACTGCATCGA.....................2411.00100000000000001000
................................................TTTAAGTGCGTTAATGAGATGGGCGAGC....................................................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
................................................TTTAAGTGCGTTAATGAGATGGGCGA......................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
..........................................................TTAATGAGATGGGCGAGCT...................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
.................................................TTAAGTGCGTTAATGAGATGGGC........................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TGCATCGAACAGAACTACACGTGGAA...2611.00100000000000001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTGGGACTGCATCGAACAGAAC..............2511.00100000001000000000
droSec2
TGGTTGATCTTCTCAATAATGGGTGTTCAGTTCTTTGGTGGTAAATTTTTTAAGTGCGTTAATGAGATGGGCGAGCTACTGCCGATTACTGTAAGTATTCT----------------------GG-----T-----------GGA--------TGTTCAGATGC-----------AGCTT------CAT---------ACCAAT---TAA-------------------------------------------------------------------C--------------------------------------------------------------ACCTGAGAT--------ATTATTAA-----------TCATTT--CATA----TTCCAGGAGGTTAACGACAAGTGGGACTGCATCGAACAGAACTACACGTGGATTAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................GTAAGTATTCT----------------------GG-----T-----------GGA--------TGTTCAGATG.............................................................................................................................................................................................................................................................................................2711.0010001
.....................................................................................................................................................................................................................................................................................................................................................................................................................ACGACAAGTGGGACTGCATCGAAC...................2411.0010100
droYak3
TGGTTGATCTTCTCAATAATGGGTGTTCAGTTCTTTGGTGGTAAATTTTTTAAGTGCGTTAATGAGATGGGCGAGCTACTGCCGATTACTGTAAGTATTCC----------------------GG-----T-----------GAA--------TGTTCAGATGC-----------AGCCA------CGC---------ACCAAT---CAA-------------------------------------------------------------------C--------------------------------------------------------------ATTTGGGAT--------ATTAATAA-----------TCATTG--CATA----TTCCAGGAGGTGAACGACAAGTGGGACTGCATCGAACAGAACTACACGTGGATTAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................ATAA-----------TCATTG--CATA----TTCCAGAT................................................2211.00100100000000
.......................................................................................................................................................................................................................................................................................................................................................................TAATAA-----------TCATTG--CATA----TTCCAGT.................................................2311.00100000100000
droEre2
TGGTTGATCTTCTCAATAATGGGTGTTCAGTTCTTTGGTGGTAAATTTTTTAAGTGCGTTAATGAGATGGGCGAGCTACTGCCGATTACTGTAAGTATTCT----------------------GG-----T-----------GGA--------TGCTCAGATGC-----------AGTTG------CAC---------ACCAAT---CAA-------------------------------------------------------------------C--------------------------------------------------------------ACCGGGGAT--------ATTATTAA-----------TCATTG--CATA----TTCCAGGAGGTAAACGACAAGTGGGACTGCATCGAACAGAACTACACGTGGATCAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................TTAATGAGATGGGCGAGCTACTGCCGA...........................................................................................................................................................................................................................................................................................................................................................................2714.0040000004
.........................................................................................................................................................................................................................................................................................................................................................................TTAA-----------TCATTG--CATA----TTCCAG..................................................2011.0010000010
..................................TTGGTGGTAAATTTTTTAAGTGCGTT....................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................TATTAA-----------TCATTG--CATA----TTCCAG..................................................2211.0010000010

Generated: 06/08/2015 at 03:37 PM