ID:

dpe_1019

 Coordinate:

scaffold_2:1777170-1777320 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dper\GL10934-cds]; exon [dper_GLEANR_11057:2]; intron [Dper\GL10934-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AGCTTTGCATTGGCCGCCCTGCTCTACGATGGCTGGGAACTGAACCGATGGTGCGAACGATTCGTTCGATATTTTTATTGCAGGGCGGCGCTTGGCCCTGCCTCGGATGTTCTCGCGCACCGAGCCAAAGAATCGAGCTCAGCTTTAATGGCTCCATCGAAGAAAATAAATAAGTAAGCAGTAAGCATAGCTAAAAATGATTCAAAATCTCTGCATACTGAAATGAGAATACATTTCATGCATTGAAATGA
***********************************************************************........(((((((........)))))))(((((.(((......)))))))).****************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V057
head
......................................................................................................TCGGATGTTCTCGCGCACCGAGC.............................................................................................................................. 23 0 1 5.00 5 5 0
.......................................................................................................CGGATGTTCTCGCGCACCGAGCCA............................................................................................................................ 24 0 1 1.00 1 1 0
..................................................................................................................................................................................................AAATGATTCAAAATCTCTGCATACT................................ 25 0 1 1.00 1 1 0
......................................................................................................TCGGATGTTCTCGCGCACCGAGCCA............................................................................................................................ 25 0 1 1.00 1 1 0
.....................................................................................................CTCGGATGTTCTCGCGCACCGAG............................................................................................................................... 23 0 1 1.00 1 1 0
......................................................................................................TCGGATGTTCTCGCGCACCGA................................................................................................................................ 21 0 1 1.00 1 1 0
..................................................................................................................................................................................................AAATGATTCAAAATCTCTGCATAC................................. 24 0 1 1.00 1 1 0
...............................................................................................CGGTGCCTCGGATGTTCTCGCGCACCG................................................................................................................................. 27 2 1 1.00 1 1 0
.......................................................................TTTTTATTGCAGGGCGGCGCTT.............................................................................................................................................................. 22 0 1 1.00 1 1 0
......................................................................................................TCGGATGTTCTCGCGCACCGAGCCC............................................................................................................................ 25 1 1 1.00 1 1 0
......................................................................................................TCGGATGTTCTCGCGCACCGAGCA............................................................................................................................. 24 1 1 1.00 1 1 0
............................................CCGATGGTGCGAACGATTCGTT......................................................................................................................................................................................... 22 0 2 0.50 1 1 0
............................................CCGATGGTGCGAACGATTCGTTC........................................................................................................................................................................................ 23 0 2 0.50 1 1 0
............................................CCGATGGTGCGAACGATTCGT.......................................................................................................................................................................................... 21 0 2 0.50 1 1 0
...............................................................................................................CTCGCGCGCCGAACCAACGA........................................................................................................................ 20 3 5 0.20 1 0 1

Anti-sense strand reads

TCGAAACGTAACCGGCGGGACGAGATGCTACCGACCCTTGACTTGGCTACCACGCTTGCTAAGCAAGCTATAAAAATAACGTCCCGCCGCGAACCGGGACGGAGCCTACAAGAGCGCGTGGCTCGGTTTCTTAGCTCGAGTCGAAATTACCGAGGTAGCTTCTTTTATTTATTCATTCGTCATTCGTATCGATTTTTACTAAGTTTTAGAGACGTATGACTTTACTCTTATGTAAAGTACGTAACTTTACT
******************************************************************************************************************************........(((((((........)))))))(((((.(((......)))))))).*********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V042
embryo
 V111
male body		 V057
head
.............................ACCGACCCTTGACTTGGCTACCAC...................................................................................................................................................................................................... 24 0 1 64.00 64 60 2 1 1 0
..........................GCTACCGACCCTTGACTTGGCTACCAC...................................................................................................................................................................................................... 27 0 1 55.00 55 55 0 0 0 0
.................................................................................................................................................................................CGTCATTCGTATCGATTTTTACTAAGT............................................... 27 0 1 30.00 30 30 0 0 0 0
...........................CTACCGACCCTTGACTTGGCTACCAC...................................................................................................................................................................................................... 26 0 1 27.00 27 27 0 0 0 0
............................TACCGACCCTTGACTTGGCTACCAC...................................................................................................................................................................................................... 25 0 1 18.00 18 18 0 0 0 0
........................................................................................................................................CGAGTCGAAATTACCGAGGTAGCTTCT........................................................................................ 27 0 1 18.00 18 18 0 0 0 0
.........................TGCTACCGACCCTTGACTTGGCTACCAC...................................................................................................................................................................................................... 28 0 1 15.00 15 15 0 0 0 0
..............................CCGACCCTTGACTTGGCTACCAC...................................................................................................................................................................................................... 23 0 1 14.00 14 13 0 0 1 0
.............................................................................................................................................CGAAATTACCGAGGTAGCTTCTTT...................................................................................... 24 0 13 11.08 144 141 0 3 0 0
.....................................................................................................................GTGGCTCGGTTTCTTAGCTCGAGT.............................................................................................................. 24 0 1 10.00 10 10 0 0 0 0
.............................ACCGACCCTTGACTTGGCTACCA....................................................................................................................................................................................................... 23 0 1 9.00 9 9 0 0 0 0
...............................CGACCCTTGACTTGGCTACCAC...................................................................................................................................................................................................... 22 0 1 8.00 8 6 1 1 0 0
................................................................................................................................................................................TCGTCATTCGTATCGATTTTTACTAAGT............................................... 28 0 1 7.00 7 7 0 0 0 0
..................................................................................................................................................................................GTCATTCGTATCGATTTTTACTAAGT............................................... 26 0 1 6.00 6 6 0 0 0 0
...........................................................................................................................CGGTTTCTTAGCTCGAGTCGAAAT........................................................................................................ 24 0 1 6.00 6 4 2 0 0 0
....................................................................................CGCCGCGAACCGGGACGGAGCCTACAAG........................................................................................................................................... 28 0 1 6.00 6 6 0 0 0 0
..................................CCCTTGACTTGGCTACCAC...................................................................................................................................................................................................... 19 0 1 5.00 5 1 4 0 0 0
...........................................................................................................ACAAGAGCGCGTGGCTCGGTTTCT........................................................................................................................ 24 0 1 5.00 5 5 0 0 0 0
..................................................................................................................................................................................................TTTACTAAGTTTTAGAGACGTATGACT.............................. 27 0 1 5.00 5 5 0 0 0 0
..........................................................................................GAACCGGGACGGAGCCTACAAG........................................................................................................................................... 22 0 1 4.00 4 4 0 0 0 0
..........................................................................................................................TCGGTTTCTTAGCTCGAGTCGAAAT........................................................................................................ 25 0 1 4.00 4 4 0 0 0 0
...........................................................................................................................CGGTTTCTTAGCTCGAGTCGAAA......................................................................................................... 23 0 1 4.00 4 4 0 0 0 0
..........................GCTACCGACCCTTGACTTGGCTACCA....................................................................................................................................................................................................... 26 0 1 4.00 4 4 0 0 0 0
.............................................................................................................................................CGAAATTACCGAGGTAGCTTCTTTT..................................................................................... 25 0 1 4.00 4 4 0 0 0 0
..............................................................................................CGGGACGGAGCCTACAAGAGCGCGT.................................................................................................................................... 25 0 1 4.00 4 4 0 0 0 0
....................................................................................................................................................................................CATTCGTATCGATTTTTACTAAGT............................................... 24 0 1 4.00 4 4 0 0 0 0
........................................................................................................................................CGAGTCGAAATTACCGAGGTAGCTTCTT....................................................................................... 28 0 1 3.00 3 3 0 0 0 0
.......................................................................................................................GGCTCGGTTTCTTAGCTCGAGT.............................................................................................................. 22 0 1 3.00 3 3 0 0 0 0
................................................................................................................................................................................TCGTCATTCGTATCGATTTTTACT................................................... 24 0 1 3.00 3 3 0 0 0 0
.......................................................................................................................................TCGAGTCGAAATTACCGAGGTAGCTTCT........................................................................................ 28 0 1 3.00 3 3 0 0 0 0
.........................................................................................CGAACCGGGACGGAGCCTACAA............................................................................................................................................ 22 0 1 3.00 3 2 0 1 0 0
.................................................................................................GACGGAGCCTACAAGAGCGCGTGGCT................................................................................................................................ 26 0 1 3.00 3 3 0 0 0 0
...................................................................................CCGCCGCGAACCGGGACGGAGCCT................................................................................................................................................ 24 0 1 3.00 3 3 0 0 0 0
...........................................................................................................................................GTCGAAATTACCGAGGTAGCTTCTTT...................................................................................... 26 0 1 3.00 3 3 0 0 0 0
.........................................................................................................................................GAGTCGAAATTACCGAGGTAGCTTCT........................................................................................ 26 0 1 3.00 3 2 0 1 0 0
..................................................................................................................CGCGTGGCTCGGTTTCTTAGCTCGAGT.............................................................................................................. 27 0 1 3.00 3 3 0 0 0 0
................GGGACGAGATGCTACCGACCCTTGACT................................................................................................................................................................................................................ 27 0 1 3.00 3 2 0 1 0 0
........................................................................................................................................CGAGTCGAAATTACCGAGGTAGCTTC......................................................................................... 26 0 1 3.00 3 3 0 0 0 0
...........................................................................................................ACAAGAGCGCGTGGCTCGGTTTCTT....................................................................................................................... 25 0 1 3.00 3 3 0 0 0 0
..............................................................................................................................................GAAATTACCGAGGTAGCTTCTTT...................................................................................... 23 0 13 2.08 27 23 0 2 2 0
.................................................................................................................GCGCGTGGCTCGGTTTCTTGGCTCGAGT.............................................................................................................. 28 1 1 2.00 2 2 0 0 0 0
..................................................................................................ACGGAGCCTACAAGAGCGCGTGGCT................................................................................................................................ 25 0 1 2.00 2 2 0 0 0 0
..............................CCGACCCTTGACTTGGCTACCA....................................................................................................................................................................................................... 22 0 1 2.00 2 2 0 0 0 0
................................................................................................GGACGGAGCCTACAAGAGCGCGT.................................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0
..........................................................................................GAACCGGGACGGAGCCTACAA............................................................................................................................................ 21 0 1 2.00 2 2 0 0 0 0
...........................................................................................................................CGGTTTCTTAGCTCGAGTC............................................................................................................. 19 0 1 2.00 2 0 2 0 0 0
.....................................................................................GCCGCGAACCGGGACGGAGCCTACAAG........................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0
.......................................................................................................................GGCTCGGTTTCTTAGCTCGAGTCGAAA......................................................................................................... 27 0 1 2.00 2 2 0 0 0 0
...................................................................................................CGGAGCCTACAAGAGCGCGTGGCT................................................................................................................................ 24 0 1 2.00 2 2 0 0 0 0
....................................................................................................................................................ACCGAGGTAGCTTCTTTTATTTATTCAT........................................................................... 28 0 1 2.00 2 2 0 0 0 0
....................................................................................................................CGTGGCTCGGTTTCTTAGCTCGAGT.............................................................................................................. 25 0 1 2.00 2 2 0 0 0 0
......................................................................................................................TGGCTCGGTTTCTTAGCTCGAGT.............................................................................................................. 23 0 1 2.00 2 2 0 0 0 0
..............................................................................................................................TTTCTTAGCTCGAGTCGAAAT........................................................................................................ 21 0 1 2.00 2 2 0 0 0 0
.............................................................................................................................GTTTCTTAGCTCGAGTCGAAAT........................................................................................................ 22 0 1 2.00 2 2 0 0 0 0
................................GACCCTTGACTTGGCTACCAC...................................................................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0
......................................................................................................AGCCTACAAGAGCGCGTGGCTCGGTT........................................................................................................................... 26 0 1 2.00 2 2 0 0 0 0
.....................................................................................................................................................CCGAGGTAGCTTCTTTTATTTATTCATT.......................................................................... 28 0 1 2.00 2 2 0 0 0 0
.....................................................................................................................ATGGCTCGGTTTCTTAGCTCGAGT.............................................................................................................. 24 1 1 2.00 2 2 0 0 0 0
...............................................................................................................................................................................TTCGTCATTCGTATCGATTTTTAC.................................................... 24 0 1 2.00 2 2 0 0 0 0
...................................................................................................CGGAGCCTACAAGAGCGCGT.................................................................................................................................... 20 0 1 2.00 2 2 0 0 0 0
...........................................................................................................................CGGTTTCTTAGCTCGAGTCGAAATTAC..................................................................................................... 27 0 1 2.00 2 2 0 0 0 0
......................................................................................................................................................CGAGGTAGCTTCTTTTATTTATTCATT.......................................................................... 27 0 1 2.00 2 1 1 0 0 0
......................................................CTTGCTAAGCAAGCTATAAAAATAACGT......................................................................................................................................................................... 28 0 2 2.00 4 4 0 0 0 0
......................................................................................................................................................CGAGGTAGCTTCTTTTATTTATTCAT........................................................................... 26 0 1 2.00 2 1 1 0 0 0
............................................................................................................................GGTTTCTTAGCTCGAGTCGAAAT........................................................................................................ 23 0 1 2.00 2 2 0 0 0 0
.CGAAACGTAACCGGCGGGACGAGAT................................................................................................................................................................................................................................. 25 0 1 2.00 2 2 0 0 0 0
.................................................................................................................GCGCGTGGCTCGGTTTCTTAGCTCGAGT.............................................................................................................. 28 0 1 2.00 2 2 0 0 0 0
..........................GCTACCGACCCTTGACTTAGCTACCAC...................................................................................................................................................................................................... 27 1 1 2.00 2 2 0 0 0 0
.........................TGCTACCGACCCTTGACTTGGCTACC........................................................................................................................................................................................................ 26 0 1 2.00 2 2 0 0 0 0
.............................................................................................................................................................................................................TTAGAGACGTATGACTTTACTCTT...................... 24 0 1 2.00 2 2 0 0 0 0
........................................................TGCTAAGCAAGCTATAAAAATAACGT......................................................................................................................................................................... 26 0 2 1.50 3 3 0 0 0 0
............................................................................................................................................TCGAAATTACCGAGGTAGCTTCTTT...................................................................................... 25 0 11 1.27 14 11 0 0 3 0
......................................................................................TCGCGAACCGGGACGGAGCCT................................................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0
.........................................................................................................CTACAAGAGCGCGTGGCTCGGT............................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0
............................TACCGACCCTTGACTTGGCTACCACG..................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................................TAAGTTTTAGAGACGTATGACTTTACT......................... 27 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................ATTCATTCGTCATTCGTATCGATT......................................................... 24 0 1 1.00 1 1 0 0 0 0
.................................................................................................................GCGCGTGGCTCGGTTTCTTAGCTCGAG............................................................................................................... 27 0 2 1.00 2 2 0 0 0 0
..............GCGGGACGAGATGCTACCGACCCT..................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
..............................................................................................CGGGACGGAGCCTACAACAGCGCGT.................................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0
.......................................................TTGCTAAGCAAGCTATAAAAATAACGT......................................................................................................................................................................... 27 0 2 1.00 2 2 0 0 0 0
.............................................................................................................................GTTTCTTAGCTCGAGTCGAAATTAC..................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
...........CCGGCGGGACGAGATGCTACCGACCCT..................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................................AGAGACGTATGACTTTACTCTTATGT.................. 26 0 1 1.00 1 1 0 0 0 0
........................ATGCTACCGACCGTTGACTTGGCTACCAC...................................................................................................................................................................................................... 29 1 1 1.00 1 1 0 0 0 0
.............................................................................................................................................CGAAATTACCGAGGTAGCTTCTTTTAT................................................................................... 27 0 1 1.00 1 1 0 0 0 0
.............................ACCGACCCTTGACTTGGCTACCACG..................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
.......................................................................................CGCCAACCGGGACGGAGCCTACAAG........................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
.......................................................................................................................................TCGAGTCGAAATTACCGAGGTAGCTTC......................................................................................... 27 0 1 1.00 1 1 0 0 0 0
.....................................................................................................GAGCCTACAAGAGCGCGTGGCTCGGTT........................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................CGTCATTCGTATCGATTTTTACTAAG................................................ 26 0 1 1.00 1 1 0 0 0 0
...................................................................................CCGCCGCGAACCGGGACGGAGCCTACAAG........................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................................................................CATTCGTATCGATTTTTACTAAG................................................ 23 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................CGAGTCGAAATTACCGAGGTAGCT........................................................................................... 24 0 1 1.00 1 0 0 1 0 0
....................CGAGATGCTACCGACCCTTGACTT............................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
..................GACGAGATGCTACCGACCCTTGACT................................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0
..................................................CACGCTTGCTAAGCAAGCTATAAAAAT.............................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0
....................................................................................................AAAGCCTACAAGAGCGCGTGGCTCGGTT........................................................................................................................... 28 2 1 1.00 1 1 0 0 0 0
........................................................................................GCGAACCGGGACGGAGCCTACAAG........................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................CGAGTCGAAATTACCGAGGTAGCTTCTTT...................................................................................... 29 0 1 1.00 1 1 0 0 0 0
...........................................TGGCTACCACGCTTGCTAAGCAAG........................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................TCATTCGTCATTCGTACCGATTTTT...................................................... 25 1 1 1.00 1 1 0 0 0 0
..................................................................................................ACGGAGCCTACAAGAGCGCGTGGC................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0
.............................ACCGACCCTTGACTTGTCTACCAC...................................................................................................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0
..........TCCGGCGGGACGAGATGCTACC........................................................................................................................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0
....................CGAGATGCTACCGACCCTTGACTTGGC............................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0
.............................................................................................................AAGAGCGCGTGGCTCGGTTTCTTAGCT................................................................................................................... 27 0 2 1.00 2 2 0 0 0 0
..........................................................................................................................................AGTCGAAATTACCGAGGTAGCTTCTTG...................................................................................... 27 1 1 1.00 1 1 0 0 0 0
....................CGAGATGCTACCGACCCTTGACTTGGCT........................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
......................................................................................................TGCCTACAAGAGCGCGTGGCTCGGTT........................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
...........................CTGCCGACCCTTGACTTGGCTACCAC...................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
.........................................................................................CGAACCGGGACGGAGCCTACAAGAG......................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................CGAGTCGAAATTACCGAGTTAGCTTC......................................................................................... 26 1 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................TTTACTAAGTTTTAGAGACGTA................................... 22 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................AGTCGAAATTACCGAGGTAGCTTCT........................................................................................ 25 0 1 1.00 1 1 0 0 0 0
...........................ATACCGACCCTTGACTTGGCTACCAC...................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
..................................................................................................................CGCGTGGCTCGGTTTCTTTGCTCGAGT.............................................................................................................. 27 1 1 1.00 1 1 0 0 0 0
.....................................................................................................................................GCTCGAGTCGAAATTACCGAGGTAGCT........................................................................................... 27 0 1 1.00 1 1 0 0 0 0
......................................TGACTTGGCTACCACGCTTGCTA.............................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0
....................................................................................CGCCGCGAACCGGGACGGAGCCTACAA............................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................GAGTCGAAATTACCGAGGTAGCTTCTT....................................................................................... 27 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................AAGGTTTCTTAGCTCGAGT.............................................................................................................. 19 2 1 1.00 1 1 0 0 0 0
.................................................................................................CACGGAGCCTACAAGAGCGCGTGGCT................................................................................................................................ 26 1 1 1.00 1 1 0 0 0 0
..............................................................................................................................................GAAATTACCGAGGTAGCTTCTTTTATT.................................................................................. 27 0 1 1.00 1 1 0 0 0 0
............................TCCCGACCCTTGACTTGGCTACCAC...................................................................................................................................................................................................... 25 1 1 1.00 1 0 0 1 0 0
.................................................................................................................................................................................CGTCATTCGTATCGATTTATACTAAGT............................................... 27 1 1 1.00 1 1 0 0 0 0
............................TACCGACCCTTGACTTGGCTACCA....................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
............................................................................................................CAAGAGCGCGTGGCTCGGTTTCTTAGCT................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................TTTACTAAGTTTTAGAGAGGTATGACT.............................. 27 1 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................TCATTCGTCATTCGTATCGATTTTTACT................................................... 28 0 1 1.00 1 1 0 0 0 0
.................GGACGAGATGCTACCGACCCT..................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
.................................................................................................AACGGAGCCTACAAGAGCGCGTGGCT................................................................................................................................ 26 1 1 1.00 1 1 0 0 0 0
........................................................................................................................................CGAGTCGAAATTACCGACGTAGCTTCT........................................................................................ 27 1 1 1.00 1 1 0 0 0 0
...........................................................................................................................CGGTTTCTTAGCTCGAGTCGAA.......................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................CGAGTCGAAATTACCGAGTTAGCTTCTT....................................................................................... 28 1 1 1.00 1 1 0 0 0 0
............................................................................................................................................................AGCTTCTTTTATTTATTCATTCGTCATT................................................................... 28 0 1 1.00 1 1 0 0 0 0
..............GCGGGACGAGATGCTACCGA......................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................CGGTTTCTTAGCTCGGGTCGAAAT........................................................................................................ 24 1 1 1.00 1 1 0 0 0 0
.............................ACCGACCCTTGACTTGGCTAC......................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
................GGGACGAGATGCTACCGACCCT..................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................AGCTTCTTTTATTTATTCATTCGTCA..................................................................... 26 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................GGCTCGGTTTCTTAGCTCGAGTCGAAAT........................................................................................................ 28 0 1 1.00 1 1 0 0 0 0
......................................................................................................................................................CGAGGTAGCTTCTTTTATTTATTCA............................................................................ 25 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................CGTCATTCGTATCGATTTGTACTAAGT............................................... 27 1 1 1.00 1 1 0 0 0 0
..............................................................................................................................................GAAATTACCGAGGTAGCTACTTTTATA.................................................................................. 27 2 1 1.00 1 1 0 0 0 0
..................................................................................................................TGCGTGGCTCGGTTTCTTAGCTCGAGT.............................................................................................................. 27 1 1 1.00 1 1 0 0 0 0
.........AACCGGCGGGACGAGATGCT.............................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0
...AAACGTAACCGGCGGGACGAGATGCTA............................................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0
.................................ACCCTTGACTTGGCTACCAC...................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................CCGAGTCGAAATTACCGAGCTAGCTTCT........................................................................................ 28 2 1 1.00 1 1 0 0 0 0
.CGAAACGTAACCGGCGGGACGAGA.................................................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0
.............................ACCGACCCTTGACTTAGCTACCAC...................................................................................................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0
..................GACGAGATGCTACCGACCCTT.................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................TCATTCGTCATTCGTATCGATTTT....................................................... 24 0 1 1.00 1 1 0 0 0 0
.................................................................................AGCCGCCGCGAACCGGGACGGAGCCT................................................................................................................................................ 26 2 1 1.00 1 1 0 0 0 0
..................................................................................................................CGCGTGGCTCGGTTTCTTGGCTCGAGT.............................................................................................................. 27 1 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................TTATTCATTCGTCATTCGTGTCGATTTT....................................................... 28 1 1 1.00 1 1 0 0 0 0
....................................................................................................................................AGCTCGAGTCGAAATTACCGAGGTAGC............................................................................................ 27 0 1 1.00 1 0 0 0 1 0
........................................................................................................CCTACAAGAGCGCGTGGCTCGGT............................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0
......................................................................................................................................................................................................CTAAGTTTTAGAGACGTATGACTTT............................ 25 0 1 1.00 1 1 0 0 0 0
.......................................................................................................GCCTACAAGAGCGCGTGGCT................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0
.............................ACCGACCCTTGACTGGGCTACCA....................................................................................................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0
...............................................................................................GGGACGGAGCCTACAAGAGCGCGT.................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
............................TACCGACCCTTGACTTGGCTACC........................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0
...........................CTACCGACCCTTGACTAGGCTACCA....................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................ACTAAGTTTTAGAGACGTATGACTTTAC.......................... 28 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................CGTCATTCGTATCGATTTTTAC.................................................... 22 0 1 1.00 1 1 0 0 0 0
...............................................................................................GGGACGGAGCCTACAAGAGCGCG..................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
..............................CAGACCCTTGACTTGGCTACCAC...................................................................................................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0
....................................................................................................................................................................TTATTTATTCATTCGTCATTCGTAT.............................................................. 25 0 1 1.00 1 1 0 0 0 0
............................TACCGACCCTTGACTTAGCTACCAC...................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
.............................ACCGACCCTTGACTTGGCTACCACA..................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
......CGTAACCGGCGGGACGAGATGCT.............................................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0
...........................................TGGCTACCACGCTTGCTAAGCAAGCTAT.................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
.................................................................................................AACGGAGCCTACAAGAGCGCG..................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0
.................................................................................................................GCGCGTGCCTCGGTTTCTTAGCTCGAGT.............................................................................................................. 28 1 1 1.00 1 0 1 0 0 0
.......................................................................................AGCGAACCGGGACGGAGCCTACAAG........................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................ACTAAGTTTTAGAGACGTATGACT.............................. 24 0 1 1.00 1 0 0 0 1 0
.................GGACGAGATGCTACCGACCCTT.................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................TTACTAAGTTTTAGAGACGTATGACTTT............................ 28 0 1 1.00 1 1 0 0 0 0
.............................CCCGACCCTTGACTTGGCTACCAC...................................................................................................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0
.................GGACGAGATGCTACCGACCCTTGACT................................................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................CGAAATTACCGAGGTAGCTTCTTTTATT.................................................................................. 28 0 1 1.00 1 1 0 0 0 0
...................................................................................CCGCCGCGAACCGGGACGGAG................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................................AAACTCTTATGTAAAGTACGTAACT..... 25 2 1 1.00 1 1 0 0 0 0
.......................................................................................CGCGAACCGGGACGGAGCCTACAAG........................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
.........................................................................................CGAACCGGGACGGAGCCTACAAG........................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
..........................GCTACTGACCCTTGACTTGGCTACCAC...................................................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0
.............................ACCGGCCCTTGACTTGGCTACCACCC.................................................................................................................................................................................................... 26 2 1 1.00 1 1 0 0 0 0
..........................................TTGGCTACCACGCTTGCTAAGCAAGCTAT.................................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................CGTCATTCGTATCGATTTTTACT................................................... 23 0 1 1.00 1 1 0 0 0 0
.......................................................................................AGCGAACCGGGACGGAGCCTAC.............................................................................................................................................. 22 1 1 1.00 1 1 0 0 0 0
................................GACCCTTGACTTGGCTACCA....................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................GGCTCGGTTTCTTAGCTCGAGTCG............................................................................................................ 24 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................TTTTCTTAGCTCGAGTCGAAAT........................................................................................................ 22 1 1 1.00 1 1 0 0 0 0
........................................................................................................................................CGAGTCGAAATTACCGAGGT............................................................................................... 20 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................TTCATTCGTATCGATTTTTACTAAGT............................................... 26 1 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................TTCGTCATTCGTATCGATTTTTACTAAGT............................................... 29 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................CGAAATTACCGAGGTAGCTTCTT....................................................................................... 23 0 13 0.54 7 7 0 0 0 0
..............................................................................................................AGAGCGCGTGGCTCGGTTTCTT....................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0
.............................................................................................................AAGAGCGCGTGGCTCGGTTT.......................................................................................................................... 20 0 2 0.50 1 1 0 0 0 0
................................................ACCACGCTTGCTAAGCAAGCTATA................................................................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0
.................................................................................................................GCGCGTGGCTCGGTTTCCTAGCTCGA................................................................................................................ 26 1 2 0.50 1 1 0 0 0 0
................................................................................................................AGCGCGTGGCTCGGTTTCTTAGCT................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0
..............................................................................................................AGAGCGCGTGGCTCGGTTTCT........................................................................................................................ 21 0 2 0.50 1 1 0 0 0 0
.............................................................................................................AAGAGCGCGTGGCTCGGTTTCT........................................................................................................................ 22 0 2 0.50 1 1 0 0 0 0
..................................................................................................................CGCGTGGCTCGGTTTCTTAGCTCGAG............................................................................................................... 26 0 2 0.50 1 1 0 0 0 0
..................................................................................................................CGCGTGGCTCGGTTTCTTAGCT................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0
.............................................GCTACCACGCTTGCTAAGCA.......................................................................................................................................................................................... 20 0 2 0.50 1 1 0 0 0 0
...................................................................................................................GCGTGGCTCGGTTTCTTAGCT................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0
................................................ACCGCGCGTGCTAAGCAA......................................................................................................................................................................................... 18 2 10 0.50 5 0 5 0 0 0
.........................................................GCTAAGCAAGCTATAAAAAT.............................................................................................................................................................................. 20 0 2 0.50 1 1 0 0 0 0
...........................................................TAAGCAAGCTATAAAAATAACGTCC....................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
......................................................ATTGCTAAGCAAGCTATAAAAATAACGT......................................................................................................................................................................... 28 1 2 0.50 1 1 0 0 0 0
..............................................................GCAAGCTATAAAAATAACGTCCC...................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
.........................................................GCTAAGCAAGCTATAAAAATAACG.......................................................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0
.................................................................................................................GCGCGTGGCTCGGTTTCTTAGCT................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
........................................................TGCCAAGCAAGCTATAAAAATAACGT......................................................................................................................................................................... 26 1 2 0.50 1 1 0 0 0 0
.............................................................................................................AAGAGCGCGTGGCTCGGTTTCTT....................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
......................................................................................................................................................CGAGGTAGCTTCTTTTAT................................................................................... 18 0 4 0.25 1 1 0 0 0 0
....................................................................................................................................................ACCGAGGTAGCTTCTTTTATTTAT............................................................................... 24 0 4 0.25 1 1 0 0 0 0
.............................................................................................................................................CGAAATTACCGAGGTGGCTTCTTT...................................................................................... 24 1 13 0.23 3 3 0 0 0 0
...............................................................................................................................................AAATTACCGAGGTAGCTTCTTT...................................................................................... 22 0 13 0.15 2 2 0 0 0 0
.............................................................................................................................................CGAAATTACCGAGGTAGCT........................................................................................... 19 0 13 0.15 2 2 0 0 0 0
.............................................................................................................................................CGAAATTACCGAGGTCGCTTCTTT...................................................................................... 24 1 13 0.15 2 2 0 0 0 0
..............................................................................................................................................GAAATTACCGAGGTGGCTTCTTT...................................................................................... 23 1 13 0.15 2 2 0 0 0 0
.......................................GACTTGGCTACCTCGCATGT................................................................................................................................................................................................ 20 3 7 0.14 1 0 1 0 0 0
............................................................................................................................................TCGAAATTACCGGGGTAGCTTCTTT...................................................................................... 25 1 11 0.09 1 1 0 0 0 0
............................................................................................................................................TCGAAATTACCGAGGTCGCTTCTTT...................................................................................... 25 1 11 0.09 1 1 0 0 0 0
............................................................................................................................................TCGAAATTACCGAGGTAGCTTCTT....................................................................................... 24 0 11 0.09 1 1 0 0 0 0
.............................................................................................................................................CGAAATTACCGAGGTAGCTTC......................................................................................... 21 0 13 0.08 1 1 0 0 0 0
.............................................................................................................................................CGGAATTACCGAGGTGGCTTCTTT...................................................................................... 24 2 13 0.08 1 1 0 0 0 0
..............................................................................................................................................GAAATTACCGAGGTAGCTTCTTG...................................................................................... 23 1 13 0.08 1 1 0 0 0 0
...............................................................................................................................................AAATTACCGAGGTGGCTTCTTT...................................................................................... 22 1 13 0.08 1 1 0 0 0 0
..............................................................................................................................................GAAATTCCCGAGGTAGCTTCTTT...................................................................................... 23 1 13 0.08 1 0 0 1 0 0
...............................................................................................................................................AAATTACCGAGTTAGCTTCTTT...................................................................................... 22 1 13 0.08 1 0 0 1 0 0
.............................................................................................................................................CGAAATTACCGAGGTAGCTTCT........................................................................................ 22 0 13 0.08 1 1 0 0 0 0
.............................................................................................................................................CGAAATTACCGAGGTTGCTTCTTT...................................................................................... 24 1 13 0.08 1 1 0 0 0 0
.............................................................................................................................................CGAAATTACCGAGGTAGCTTTTTT...................................................................................... 24 1 13 0.08 1 1 0 0 0 0
.............................................................................................................................................CGAAATTACCGAGGTAGCTTCTTTG..................................................................................... 25 1 13 0.08 1 1 0 0 0 0
.............................................................................................................................................CGAAATTACCGAGGTAGCTTCTTG...................................................................................... 24 1 13 0.08 1 1 0 0 0 0
...........................................................................................................................................AACGAAATTACCGAGGTAGCTTCTTT...................................................................................... 26 2 13 0.08 1 1 0 0 0 0
.............................................................................................................................................CGAAATTACCGAGGTAGCTTCTTTC..................................................................................... 25 1 13 0.08 1 1 0 0 0 0
............................................................................................................................................ACGAAATTACCGAGGTAGCTTCTTT...................................................................................... 25 1 13 0.08 1 1 0 0 0 0
.............................................................................................................................................CGAAATTACCGAGGTAGC............................................................................................ 18 0 13 0.08 1 1 0 0 0 0
.............................................................................................................................................CGAATTTACCGAGGTAGCTTCTTT...................................................................................... 24 1 13 0.08 1 1 0 0 0 0
............CGGCGGGACGAGTTCCTA............................................................................................................................................................................................................................. 18 2 14 0.07 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_2:1777120-1777370 - dpe_1019 AGCTTTGCAT--TGGCCGCCCTGCTCTACGATGGCTGGG--AACTGAACCGATGGTGCGAACGATTCGTTCGATATTTTTATTGCAGGGCGGCGCTTGGC-CCTGCCTCGGATGTTCTCGCGCACCGAGCCAAAGAATCGAGCTCAGCTTTAATGGCTCCATCGAAGAAAATAAATAAGTAAGCAGTAAGCATAGCTAAAAATGATTCAAAATCTCTGCATACTGAAATGAGAATACATTTCATGCATTGAAATGA
dp5 3:1600589-1600839 - AGCTTTGCAT--TGGCCGCCCTGCTCTACGATGGCTGGG--AACTGAACCGATGGTGCGAACGATTCGTTCGATATTTTTATTGCAGGGCGGCGCTTGGC-CCTGCCTCGGATGTTCTCGCGCACCGAGCCAAAGAATCGAGCTCAGCTTTAATGGCTCCATCGAAGAAAATAAATAAGTAAGCAGTAAGCATAGCTAAAAATGATTCAAAATCTCTGCATACTGAAATGAGAATACATTTCATGCATTGAAATGA
droWil2 scf2_1100000004514:2831770-2831879 + AGCTATGCATTCCCGCCGCCTTGCTCTGTGATAACTGGGAGAATTGTGCCGATGGTGCTGATGAATCACCTGACATTTGC-CTACA--ACGTCGCATGGCTCCAGCTTCGGAT-----------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6496:26315521-26315630 + AGCTTTGCATCTCAGCGGCCCTACTCTGTGATGGCTGGGAAAACTGTGCTGATGGAGCTGATGAATCTGTGGACATTTGC-CTACA--GCGACGTATGGCACCAGCATCTGAT-----------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15112:4826398-4826507 + AGCTTTGCATTTCGACTGCGCTTCTTTGCGATGGTTGGGAGAACTGCGCAGATGGTGCCGACGAGTCTGCGGATATTTGT-GTGCA--GCGTCGTATGGCGCCAGCGTCAGAT-----------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13266:16645298-16645406 - AGCTTTGTATATCCGCCGAATTGCTCTGCGATGGCTGGGAGAACTGTGCCGATGGAGCTGACGAATCCTCGGAGATCTGC-CTGCA--ACGCCGCATGGCACCCGCTTCGGA------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396384:753837-753945 - AGCTTTGTATATCCGCCGATCTGCTCTGCGATGGCTGGGAGAACTGTGCCGATGGAGCTGATGAGTCCTCGGAAATCTGC-CTCCA--ACGACGCATGGCCCCCGCTTCGGA------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302544:185004-185049 + AAACTTCGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGCCGAAATTAGCTT-CCTTTCTTGTTTTTTAATAA
droFic1 scf7180000454039:150797-150905 - AGCTGTGTATTTCCGCCGCCTTGCTTTGCGATGGCTGGGAGAACTGCGCCGATGGAGCCGATGAATCCTCGGACATTTGC-CTGCA--GCGTCGCATGGCTCCTGCTACCGA------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491282:573698-573816 - AGCTGTGTATTTCGGCCGCCCTGCTCTGCGATGGCTGGGAAAACTGCGCCGATGGAGCCGACGAATCCTCGGACATTTGC-CTGCA--GCGTCGCATGGCGCCGGCCACCGATAAGCGCGCG--------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000759836:22363-22480 + AGCTGTGTATTTCGGCCGCCCTGCTATGTGATGGCTGGGAGAACTGCGCCGATGGAGCCGATGAATCCTCCGACATTTGC-CTGCA--GCGTCGCATGGCACCCGCCACCGATAAGCGCGC---------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302291:830954-831058 + ----CTGTATATCGGCTGCCCTCCTCTGCGATGGCTGGGAAAATTGCGCCGATGGAGCCGACGAATCCTCAGACATTTGC-CTGCA--GCGTCGCATGGCTCCTGCTACTGA------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415379:514364-514472 - AGCTCTGCATCTCCGCCGCCCTGCTCTGCGATGGCTGGGAGAATTGCGCCGACGGAGCCGATGAATCCTCAGACATTTGC-ATGCA--GCGTCGCATGGCGCCCGCCACGGA------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409758:385010-385119 + AGCTCTGCATCTCTGCCGCCTTGCTCTGCGATGGTTGGGAAAACTGTGCCGATGGAGCCGATGAATCCTCCGATATTTGC-CTGCA--GCGTCGCATGGCACCCGCTACCGAT-----------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr2R:9342635-9342743 - AGCTCTGCATCTCGGCCGCACTGCTCTGCGATGGATGGGAGAACTGCGCCGATGGAGCTGATGAATCCTCGGATATCTGC-CTGCA--ACGCCGCATGGCACCTGCTACCGA------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 2r:10005637-10005739 - AGCTCTGCATCTCGGCCGCCTTGCTCTGCGATGGCTGGGAGAACTGCGCCGATGGAGCCGATGAATCCTCGGATATCTGC-CTACA--GCGTCGCATGGCACCTGC------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_1:6861731-6861839 - AGCTCTGCATCTCGGCCGCCTTGCTCTGCGATGGCTGGGAGAACTGCGCCGATGGAGCCGATGAATCCTCGGATATCTGC-CTGCA--GCGTCGCATGGCACCTGCTACCGA------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 2R:7616070-7616168 + AGCTCTGCATCTCGGCCGCCTTGCTCTGTGATGGCTGGGAGAACTGCGCCGACGGAGCCGATGAATCCTCGGATATCTGC-CTTCA--GCGCCGCATGGCTC----------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4845:16474232-16474309 + AGCTCTGCATCTCGGCCGCCTTGCTCTGTGATGGCTGGGAGAACTGCGCCGATGGAGCCGATGAATCCTCCGATATCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
AGCTTTGCAT--TGGCCGCCCTGCTCTACGATGGCTGGG--AACTGAACCGATGGTGCGAACGATTCGTTCGATATTTTTATTGCAGGGCGGCGCTTGGC-CCTGCCTCGGATGTTCTCGCGCACCGAGCCAAAGAATCGAGCTCAGCTTTAATGGCTCCATCGAAGAAAATAAATAAGTAAGCAGTAAGCATAGCTAAAAATGATTCAAAATCTCTGCATACTGAAATGAGAATACATTTCATGCATTGAAATGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................TCGGATGTTCTCGCGCACCGAGC..............................................................................................................................2315.005050000
............................................................................................................CGGATGTTCTCGCGCACCGAGCCA............................................................................................................................2411.001010000
.......................................................................................................................................................................................................AAATGATTCAAAATCTCTGCATACT................................2511.001010000
...........................................................................................................TCGGATGTTCTCGCGCACCGAGCCA............................................................................................................................2511.001010000
..........................................................................................................CTCGGATGTTCTCGCGCACCGAG...............................................................................................................................2311.001010000
...........................................................................................................TCGGATGTTCTCGCGCACCGA................................................................................................................................2111.001010000
.......................................................................................................................................................................................................AAATGATTCAAAATCTCTGCATAC.................................2411.001010000
...........................................................................TTTTTATTGCAGGGCGGCGCTT...............................................................................................................................................................2211.001010000
...........................................................................................................TCGGATGTTCTCGCGCACCGAGCCC............................................................................................................................2511.001010000
...........................................................................................................TCGGATGTTCTCGCGCACCGAGCA.............................................................................................................................2411.001010000
................................................CCGATGGTGCGAACGATTCGTT..........................................................................................................................................................................................2220.501010000
................................................CCGATGGTGCGAACGATTCGTTC.........................................................................................................................................................................................2320.501010000
................................................CCGATGGTGCGAACGATTCGT...........................................................................................................................................................................................2120.501010000
dp5
AGCTTTGCAT--TGGCCGCCCTGCTCTACGATGGCTGGG--AACTGAACCGATGGTGCGAACGATTCGTTCGATATTTTTATTGCAGGGCGGCGCTTGGC-CCTGCCTCGGATGTTCTCGCGCACCGAGCCAAAGAATCGAGCTCAGCTTTAATGGCTCCATCGAAGAAAATAAATAAGTAAGCAGTAAGCATAGCTAAAAATGATTCAAAATCTCTGCATACTGAAATGAGAATACATTTCATGCATTGAAATGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................GGCTGGG--AACTGAACCGATGG.........................................................................................................................................................................................................2120.5010100000000
.............................................................................................................................................................................................GCATAGCTAAAAATGATTCAAAATCT.........................................2620.5010100000000
...............................................................................................................................................................CATCGAAGAAAATAAATAAGTAAGC........................................................................2520.5010100000000
droWil2
AGCTATGCATTCCCGCCGCCTTGCTCTGTGATAACTGGGAGAATTGTGCCGATGGTGCTGATGAATCACCTGACATTTGC-CTACA--ACGTCGCATGGCTCCAGCTTCGGAT-----------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................TGCTCTGTGATAACTGGGA........................................................................................................................................................................................................................1911.00100100
................CGCCTTGCTCTGTGATAACTGGGAG.......................................................................................................................................................................................................................2511.00100010
.................................................................................CTACA--ACGTCGCATGGCTC..........................................................................................................................................................1911.00110000
.................................................................................CTACA--ACGTCGCATGGCTCCAG.......................................................................................................................................................2211.00100010
droMoj3
AGCTTTGCATCTCAGCGGCCCTACTCTGTGATGGCTGGGAAAACTGTGCTGATGGAGCTGATGAATCTGTGGACATTTGC-CTACA--GCGACGTATGGCACCAGCATCTGAT-----------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................TCTGTGATGGCTGGGAAAACTGTGC...............................................................................................................................................................................................................2511.001001000
.............................GATGGCTGGGAAAACTGTGCTGATGG.........................................................................................................................................................................................................2611.001000001
................................GGCTGGGAAAACTGTGCTGATGGA........................................................................................................................................................................................................2411.001000001
......................................GAAAACTGTGCTGATGGAGCT.....................................................................................................................................................................................................2111.001000100
droGri2
AGCTTTGCATTTCGACTGCGCTTCTTTGCGATGGTTGGGAGAACTGCGCAGATGGTGCCGACGAGTCTGCGGATATTTGT-GTGCA--GCGTCGTATGGCGCCAGCGTCAGAT-----------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
AGCTTTGTATATCCGCCGAATTGCTCTGCGATGGCTGGGAGAACTGTGCCGATGGAGCTGACGAATCCTCGGAGATCTGC-CTGCA--ACGCCGCATGGCACCCGCTTCGGA------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................AGCTGACGAATCCTCGGAGATC...................................................................................................................................................................................2211.001010000
......................................................................GGAGATCTGC-CTGCA--ACGCCGCATGG.............................................................................................................................................................2611.001010000
.................................................................................CTGCA--ACGCCGCATGGCACCCGCTT....................................................................................................................................................2511.001010000
........................................GAACTGTGCCGATGGAGCTGAC..................................................................................................................................................................................................2211.001000010
...............................TGGCTGGGAGAACTGTGGG..............................................................................................................................................................................................................1940.251000100
droBip1
AGCTTTGTATATCCGCCGATCTGCTCTGCGATGGCTGGGAGAACTGTGCCGATGGAGCTGATGAGTCCTCGGAAATCTGC-CTCCA--ACGACGCATGGCCCCCGCTTCGGA------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
AAACTTCGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGCCGAAATTAGCTT-CCTTTCTTGTTTTTTAATAASizeHit CountTotal NormTotal
No Reads
droFic1
AGCTGTGTATTTCCGCCGCCTTGCTTTGCGATGGCTGGGAGAACTGCGCCGATGGAGCCGATGAATCCTCGGACATTTGC-CTGCA--GCGTCGCATGGCTCCTGCTACCGA------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
AGCTGTGTATTTCGGCCGCCCTGCTCTGCGATGGCTGGGAAAACTGCGCCGATGGAGCCGACGAATCCTCGGACATTTGC-CTGCA--GCGTCGCATGGCGCCGGCCACCGATAAGCGCGCG--------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
AGCTGTGTATTTCGGCCGCCCTGCTATGTGATGGCTGGGAGAACTGCGCCGATGGAGCCGATGAATCCTCCGACATTTGC-CTGCA--GCGTCGCATGGCACCCGCCACCGATAAGCGCGC---------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
----CTGTATATCGGCTGCCCTCCTCTGCGATGGCTGGGAAAATTGCGCCGATGGAGCCGACGAATCCTCAGACATTTGC-CTGCA--GCGTCGCATGGCTCCTGCTACTGA------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
AGCTCTGCATCTCCGCCGCCCTGCTCTGCGATGGCTGGGAGAATTGCGCCGACGGAGCCGATGAATCCTCAGACATTTGC-ATGCA--GCGTCGCATGGCGCCCGCCACGGA------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
AGCTCTGCATCTCTGCCGCCTTGCTCTGCGATGGTTGGGAAAACTGTGCCGATGGAGCCGATGAATCCTCCGATATTTGC-CTGCA--GCGTCGCATGGCACCCGCTACCGAT-----------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
AGCTCTGCATCTCGGCCGCACTGCTCTGCGATGGATGGGAGAACTGCGCCGATGGAGCTGATGAATCCTCGGATATCTGC-CTGCA--ACGCCGCATGGCACCTGCTACCGA------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................TGC-CTGCA--ACGCCGCATGGCACCTGC......................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GCTCTGCGATGGATGGGAGAACTGC.................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000001000000000000000000000000000000000
....................................................TGGAGCTGATGAATCCTCGG........................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
........................................GAACTGCGCCGATGGAGCT.....................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................ATCCTCGGATATCTGC-CTGCA--ACGCA...................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TGGAGCTGATGAATCCTCG.........................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................ATGGGAGAACTGCGCCGATG..........................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................TGCGCCGATGGAGCTGATGG................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.................................................................TCCTCGGATATCTGC-CTGCA--ACGCC...................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................CGATGGAGCTGATGAATCCTCGGA.......................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.................................GATGGGAGAACTGCGCCGAT...........................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.......CATCTCGGCCGCACTGCTCTGCGATG...............................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GATGGATGGGAGAACTGCGCCGATGG.........................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................TGCGCCGATGGAGCTGATG.................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
........................TCTGCGATGGATGGGAGAACTGCGCC..............................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................GAGCTGATGAATCCTCGGATATC...................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................CCTCGGATATCTGC-CTGC...........................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GATGGAGCTGATGAATCCTC..........................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
................................GGATGGGAGAACTGCGCCGATGG.........................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......................CTCTGCGATGGATGGGAGAACTG..................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GGCCGCACTGCTCTGCGATGG..............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CTGCTCTGCGATGGATGGGA........................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................GATGGGAGAACTGCGCCGATG..........................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..........................................ACTGCGCCGATGGAGCTGATGAA...............................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................GATGGGAGAACTGCGCCGATGGA........................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................AACTGCGCCGATGGAGCTGATGAATC.............................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....................................................TGGAGCTGATGAATCCTCGGATATCT..................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TCTGCATCTCGGCCGCACTGCTC......................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ATCTCGGCCGCACTGCTCTGC...................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
............................CGATGGATGGGAGAACTGCGCCGATG..........................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................GAGAACTGCGCCGATGGAGCT.....................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
droSim2
AGCTCTGCATCTCGGCCGCCTTGCTCTGCGATGGCTGGGAGAACTGCGCCGATGGAGCCGATGAATCCTCGGATATCTGC-CTACA--GCGTCGCATGGCACCTGC------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................CGATGAATCCTCGGATATCTGC-CTACA--GC......................................................................................................................................................................2911.00101000000000000000
.............................GATGGCTGGGAGAACTGC.................................................................................................................................................................................................................1811.00101000000000000000
................CGCCTTGCTCTGCGATGG..............................................................................................................................................................................................................................1811.00100010000000000000
....................................................................TCGGATATCTGC-CTACA--GCGT....................................................................................................................................................................2111.00100000000001000000
droSec2
AGCTCTGCATCTCGGCCGCCTTGCTCTGCGATGGCTGGGAGAACTGCGCCGATGGAGCCGATGAATCCTCGGATATCTGC-CTGCA--GCGTCGCATGGCACCTGCTACCGA------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................CGCCTTGCTCTGCGATGGCTGGGAGA......................................................................................................................................................................................................................2611.0010010
...........................................................GATGAATCCTCGGATATCTGC-...............................................................................................................................................................................2111.0010010
..................................CTGGGAGAACTGCGCCGATGGAGCCG....................................................................................................................................................................................................2611.0010010
.............................................GCGCCGATGGAGCCGATGAAT..............................................................................................................................................................................................2111.0010001
droYak3
AGCTCTGCATCTCGGCCGCCTTGCTCTGTGATGGCTGGGAGAACTGCGCCGACGGAGCCGATGAATCCTCGGATATCTGC-CTTCA--GCGCCGCATGGCTC----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................AACTGCGCCGACGGAGCCG....................................................................................................................................................................................................1911.00101000000000
................................GGCTGGGAGAACTGCGCC..............................................................................................................................................................................................................1811.00100000010000
........................................................GCCGATGAATCCTCGGATATCT..................................................................................................................................................................................2211.00101000000000
.........................CTGTGATGGCTGGGAGAACT...................................................................................................................................................................................................................2011.00100000010000
................CGCCTTGCTCTGTGATGGCTGGGA........................................................................................................................................................................................................................2411.00110000000000
droEre2
AGCTCTGCATCTCGGCCGCCTTGCTCTGTGATGGCTGGGAGAACTGCGCCGATGGAGCCGATGAATCCTCCGATATCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................GTGATGGCTGGGAGAACTGCGCC..............................................................................................................................................................................................................2311.0010000100
........................TCTGTGATGGCTGGGAGAACTGCGC...............................................................................................................................................................................................................2511.0010100000
.............................GATGGCTGGGAGAACTGCGCC..............................................................................................................................................................................................................2111.0010000100
..................................................GATGGAGCCGATGAATCCTCC.........................................................................................................................................................................................2111.0010000010

Generated: 06/08/2015 at 03:36 PM