ID:

dpe_100

 Coordinate:

scaffold_7563:1065-1157 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.7 -17.5 -17.4

Flybase annnotation

intergenic

No Repeatable elements found

mature
  1. scaffold_55:116646-116668 -
  2. scaffold_85:28402-28424 +
  3. scaffold_605:8360-8382 -
  4. dpe_100  scaffold_7563:1065-1087 +
star
  1. scaffold_117:54000-54024 +
  2. scaffold_0:10593366-10593390 +
  3. scaffold_4:3573021-3573045 +
  4. scaffold_85:28476-28500 +
  5. scaffold_76:131172-131196 -
  6. scaffold_260:33101-33125 -
  7. scaffold_107:53264-53288 +
  8. scaffold_605:8277-8301 -
  9. scaffold_1573:4493-4517 -
  10. scaffold_9657:185-209 -
  11. dpe_100  scaffold_7563:1110-1134 +

Sense Strand Reads

TTGCTCTATAATATATACTATACGATTTATATTTAACTTAAATTAACGGACAAGAGTACTGTTGGGACTAGGGGCTCCGCTGCGTGTACACCTACTCCGTCTGCTCCTTCCGCCTTCTCTCCATGGACCTAAGCGTTCGCATCAAAGCTAGAGGCGAGACTCTCGCCGGCCGCTTCCCACACCTTCGAGTCTG
***********************************.((((..((...(((...(((....((..(((..((((((......(((.(((....)))..)))..)))))))))))...))))))...))..))))..********************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V042
embryo
 V111
male body		 V057
head
 V050
head
..................................................CAAGAGTACTGTTGGGACTAGGG........................................................................................................................ 23 0 4 153.00 612 565 1 39 6 1 0
..................................................CAAGAGTACTGTTGGGACTAGGGG....................................................................................................................... 24 0 4 142.00 568 553 1 3 11 0 0
..................................................CAAGAGTACTGTTGGGACTAGG......................................................................................................................... 22 0 4 117.00 468 458 0 10 0 0 0
..................................................CAAGAGTACTGTTGGGACTAGGGGC...................................................................................................................... 25 0 4 36.75 147 114 3 1 29 0 0
...................................................AAGAGTACTGTTGGGACTAGGGG....................................................................................................................... 23 0 4 16.25 65 65 0 0 0 0 0
...................................................AAGAGTACTGTTGGGACTAGGG........................................................................................................................ 22 0 4 14.75 59 57 0 2 0 0 0
..................................................CAAGAGTACTGTTGGGACTAG.......................................................................................................................... 21 0 4 14.75 59 58 1 0 0 0 0
...................................................AAGAGTACTGTTGGGACTAGG......................................................................................................................... 21 0 4 13.00 52 52 0 0 0 0 0
........................................................CACTGTTTGGACTAGGGGC...................................................................................................................... 19 2 4 10.50 42 4 37 0 1 0 0
.........................................................ACTATTTGGACTAGGGGC...................................................................................................................... 18 2 4 6.25 25 1 23 0 0 0 1
.........................................................ACTGTTTGGACTAGGGGC...................................................................................................................... 18 1 4 5.00 20 1 19 0 0 0 0
..................................................CAAGAGTAGTGTTGGGACTAGG......................................................................................................................... 22 1 4 4.75 19 19 0 0 0 0 0
..................................................CAAGAGTAGTGTTGGGACTAGGGG....................................................................................................................... 24 1 4 4.75 19 19 0 0 0 0 0
..................................................CAAGAGTAGTGTTGGGACTAGGG........................................................................................................................ 23 1 4 4.50 18 18 0 0 0 0 0
...................................................AAGAGTACTGTTGGGACTAGGGGC...................................................................................................................... 24 0 4 4.25 17 15 2 0 0 0 0
..................................................CAAGAGTACTGTTGGGACTAGGGA....................................................................................................................... 24 1 4 3.00 12 9 3 0 0 0 0
..................................................CAAGAGTAATGTTGGGACTAGGG........................................................................................................................ 23 1 4 2.75 11 11 0 0 0 0 0
...................................................AAGAGTACTGTTGGGACTAG.......................................................................................................................... 20 0 4 2.75 11 11 0 0 0 0 0
..................................................CAAGAGTAATGTTGGGACTAGG......................................................................................................................... 22 1 4 2.50 10 10 0 0 0 0 0
..................................................CAAGAGTAATGTTGGGACTAGGGG....................................................................................................................... 24 1 4 2.50 10 10 0 0 0 0 0
....................................................AGAGCACTATTTGGACTAGG......................................................................................................................... 20 3 9 2.11 19 3 5 3 5 3 0
.........................................................................................................................CAAGGACCTAAGCGTTCGCATCAAAA.............................................. 26 2 1 2.00 2 2 0 0 0 0 0
..................................................CAAGAGTACTGTTGGGACTAGGT........................................................................................................................ 23 1 4 2.00 8 8 0 0 0 0 0
..................................................CAAGAGTAGTGTTGGGACTAGGGGC...................................................................................................................... 25 1 4 1.50 6 6 0 0 0 0 0
......................................TAAATTAACGGACAAGAGTACTGT................................................................................................................................... 24 0 4 1.50 6 3 0 2 1 0 0
....................................................AGAGTACTGTTGGGACTAGGGG....................................................................................................................... 22 0 4 1.50 6 6 0 0 0 0 0
..................................................CAAGAGTACTGTTGGGAC............................................................................................................................. 18 0 4 1.25 5 2 3 0 0 0 0
....................................................AGAGTACTGTTGGGACTAGG......................................................................................................................... 20 0 4 1.25 5 5 0 0 0 0 0
..................................................CAAGAGTACTGTTGGGACTAGGGT....................................................................................................................... 24 1 4 1.25 5 5 0 0 0 0 0
..................................................CAAGAGTACTGTTGGGACT............................................................................................................................ 19 0 4 1.25 5 2 2 1 0 0 0
..................................................CAAGAGTACTGTTGGGACTAGGGAA...................................................................................................................... 25 2 4 1.25 5 1 4 0 0 0 0
.......................................................GCACTATTTGGACTAGGGGC...................................................................................................................... 20 3 9 1.22 11 2 8 1 0 0 0
.........................................................ACTGTTTGGACTAGGGGCT..................................................................................................................... 19 1 1 1.00 1 0 0 1 0 0 0
..................................................CAAGAGTACTGTTGGGACTAGGA........................................................................................................................ 23 1 4 1.00 4 4 0 0 0 0 0
...........................................TAACGGACAAGAGTACTGTTGGGAC............................................................................................................................. 25 0 4 1.00 4 4 0 0 0 0 0
..................................................CAAGAGTACTGTTGGGACTAGGGTTTC.................................................................................................................... 27 2 1 1.00 1 1 0 0 0 0 0
.............................................................................CGCTGCGTGGACACCTACTCCGTC............................................................................................ 24 1 1 1.00 1 1 0 0 0 0 0
.................................................ACAAGAGTACTGTTGGGACTAGGG........................................................................................................................ 24 0 4 1.00 4 4 0 0 0 0 0
...................................................AAGAGTACGGTTGGGACTAGGG........................................................................................................................ 22 1 4 1.00 4 4 0 0 0 0 0
..................................................CAAGAGTACTGTTGGGACTA........................................................................................................................... 20 0 4 1.00 4 4 0 0 0 0 0
..................................................CAAGAGTAGTGTTGGGACTAGGGTTT..................................................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0
..................................................CAAGAGTATTGTTGGGACTAGGGG....................................................................................................................... 24 1 4 1.00 4 4 0 0 0 0 0
...................................................AAGAGTACGGTTGGGACTAGG......................................................................................................................... 21 1 4 0.75 3 3 0 0 0 0 0
......................................TAAATTAACGGACAAGAGTACTGTTG................................................................................................................................. 26 0 4 0.75 3 1 2 0 0 0 0
..................................................CAAGAGTACTGTTGGGACTAGTGG....................................................................................................................... 24 1 4 0.75 3 2 0 0 1 0 0
..................................................CAAGAGTACTGTTGGGACTAGGGGT...................................................................................................................... 25 1 4 0.75 3 2 1 0 0 0 0
..................................................GAAGAGTACTGTTGGGACTAGGGG....................................................................................................................... 24 1 4 0.75 3 3 0 0 0 0 0
...................................................GAGAGTACTGTTGGGACTAGGGG....................................................................................................................... 23 1 4 0.75 3 3 0 0 0 0 0
...................................................AAGAGTACGGTTGGGACTAGGGG....................................................................................................................... 23 1 4 0.75 3 3 0 0 0 0 0
..................................................CAAGAGTACTGTTGGGACTAGT......................................................................................................................... 22 1 4 0.75 3 3 0 0 0 0 0
.................................................ACAAGAGTACTGTTGGGACTAGGGG....................................................................................................................... 25 0 4 0.75 3 3 0 0 0 0 0
.............................................ACGGACAAGAGTACTGTTGGGAC............................................................................................................................. 23 0 4 0.75 3 3 0 0 0 0 0
..................................................CAAGAGTATTGTTGGGACTAGGG........................................................................................................................ 23 1 4 0.75 3 3 0 0 0 0 0
........................................................CACTGTTTGGACTAGGGG....................................................................................................................... 18 2 8 0.63 5 3 2 0 0 0 0
....................................................AGAGCACTATTTGGACTAGGG........................................................................................................................ 21 3 5 0.60 3 0 0 1 1 1 0
...........................................TAACGGACAAGAGTACTGTTGGGACT............................................................................................................................ 26 0 4 0.50 2 1 1 0 0 0 0
.............................................ACGGACAAGAGTACTGTTGGGA.............................................................................................................................. 22 0 4 0.50 2 2 0 0 0 0 0
..................................................CAAGGGTACTGTTGGGACTAGG......................................................................................................................... 22 1 4 0.50 2 2 0 0 0 0 0
.......................................................GTACTGTTGGGACTAGGGG....................................................................................................................... 19 0 4 0.50 2 2 0 0 0 0 0
...................................................AAGAGTACCGTTGGGACTAGGGG....................................................................................................................... 23 1 4 0.50 2 2 0 0 0 0 0
..................................................CAAGAGTACTGTTGGGACTAGAGG....................................................................................................................... 24 1 4 0.50 2 2 0 0 0 0 0
..................................................CAAGAGTATTGTTGGGACTAGG......................................................................................................................... 22 1 4 0.50 2 2 0 0 0 0 0
..................................................CAAGAGTACTGTTGGGACTAGCG........................................................................................................................ 23 1 4 0.50 2 1 0 1 0 0 0
....................................................AGAGTACTGTTGGGACTAGGG........................................................................................................................ 21 0 4 0.50 2 2 0 0 0 0 0
..................................................CAAGAGTAGTGTTGGGACTAGCGG....................................................................................................................... 24 2 4 0.50 2 2 0 0 0 0 0
..................................................CAAGAGTACTGTTGGGACTAGGGC....................................................................................................................... 24 1 4 0.50 2 2 0 0 0 0 0
..................................................CAAGAGTAGTGTTGGGACTAG.......................................................................................................................... 21 1 4 0.50 2 2 0 0 0 0 0
...................................................AAGAGTACAGTTGGGACTAGG......................................................................................................................... 21 1 4 0.50 2 2 0 0 0 0 0
..................................................GAAGAGTACTGTTGGGACTAGGG........................................................................................................................ 23 1 4 0.50 2 2 0 0 0 0 0
..................................................GAAGAGTACTGTTGGGACTAGG......................................................................................................................... 22 1 4 0.50 2 2 0 0 0 0 0
.....................................................GAGTACTGTTGGGACTAGG......................................................................................................................... 19 0 4 0.50 2 2 0 0 0 0 0
..................................................CAAGAGTACTTTTGGGACTAGGGG....................................................................................................................... 24 1 5 0.40 2 2 0 0 0 0 0
.....................................................GAGCACTATTTGGACTAGGG........................................................................................................................ 20 3 8 0.38 3 1 0 0 1 1 0
...............................................................................................TCCGTCTGCTCCTTCCGCCTTCTCT......................................................................... 25 0 11 0.36 4 4 0 0 0 0 0
......................................................AGCACTATTTGGACTAGGG........................................................................................................................ 19 3 20 0.35 7 5 0 1 0 1 0
.........................................................................................................................CAAGGACCTAAGCGTTCGCATCAA................................................ 24 1 10 0.30 3 3 0 0 0 0 0
.....................................................GAGCACTATTTGGACTAGG......................................................................................................................... 19 3 20 0.30 6 4 1 1 0 0 0
...................................................................................................TCTGCTCCTTCCGCCTTCTCT......................................................................... 21 0 14 0.29 4 4 0 0 0 0 0
....................................................CAAGTACTGTTGGGACTAGG......................................................................................................................... 20 2 4 0.25 1 1 0 0 0 0 0
.......................................................GCACTATTTGGACTAGGG........................................................................................................................ 18 3 20 0.25 5 5 0 0 0 0 0
.................................................TCAAGAGTACTGTTGGGACTAGGG........................................................................................................................ 24 1 4 0.25 1 1 0 0 0 0 0
..................................................CAAGAGTAGTGTTGGGACTAGGAA....................................................................................................................... 24 3 4 0.25 1 1 0 0 0 0 0
.............................................ACGGACAAGAGTACTGTTGGGACT............................................................................................................................ 24 0 4 0.25 1 0 1 0 0 0 0
..................................................CAAGAGTACTGTTGGGACTAAG......................................................................................................................... 22 1 4 0.25 1 1 0 0 0 0 0
..................................................CAAGAGTAATGTTGGGACTAG.......................................................................................................................... 21 1 4 0.25 1 1 0 0 0 0 0
..................................................TAAGAGTACTGTTGGGACTAGG......................................................................................................................... 22 1 4 0.25 1 1 0 0 0 0 0
...............................................GGACAAGAGTACTGTTGGGACTAGG......................................................................................................................... 25 0 4 0.25 1 1 0 0 0 0 0
..................................................CAAGAGTACTGTTGGGACTAGTG........................................................................................................................ 23 1 4 0.25 1 1 0 0 0 0 0
..................................................CAAGAGTATTGTTGGGACTCGG......................................................................................................................... 22 2 4 0.25 1 0 0 1 0 0 0
.....................................................GAGCACTGTTTGGACTAGGGGC...................................................................................................................... 22 2 4 0.25 1 0 1 0 0 0 0
..................................................CAAGAGTACTGCTGGGACTAGGGG....................................................................................................................... 24 1 4 0.25 1 0 0 1 0 0 0
..................................................CAAGAGTACTGTTGGGACTGGG......................................................................................................................... 22 1 4 0.25 1 1 0 0 0 0 0
..................................................CAAGAGTAGTGTTGGGACTAGCG........................................................................................................................ 23 2 4 0.25 1 1 0 0 0 0 0
..................................................CAAGAGTACTGTTGGGACTAGGAA....................................................................................................................... 24 2 4 0.25 1 1 0 0 0 0 0
......................................................AGTACTGTTGGGACTAGGGG....................................................................................................................... 20 0 4 0.25 1 1 0 0 0 0 0
...................................................AAGAGTACTGTTGGGACTAGTAA....................................................................................................................... 23 3 4 0.25 1 1 0 0 0 0 0
..................................................CAAAAGTACTGTTGGGACTAGGG........................................................................................................................ 23 1 4 0.25 1 1 0 0 0 0 0
..................................................CAAGAGTACTGTTTGGACTAGGGGC...................................................................................................................... 25 1 4 0.25 1 0 0 0 1 0 0
..................................................CAAGAGTACTGTTGGGACTAGGGAAA..................................................................................................................... 26 3 4 0.25 1 1 0 0 0 0 0
...................................................AAGAGGACTGTTGGGACTAGGG........................................................................................................................ 22 1 4 0.25 1 0 0 0 0 1 0
..................................................CAAGAGTACTGTTGGGACTAGAG........................................................................................................................ 23 1 4 0.25 1 1 0 0 0 0 0
......................................TAAATTAACGGACAAGAGTACTGTTGG................................................................................................................................ 27 0 4 0.25 1 1 0 0 0 0 0
...................................................AAGAGTACAGTTGGGACTAGGGG....................................................................................................................... 23 1 4 0.25 1 1 0 0 0 0 0
.....................................................CAATACTGTTGGGACTAGGGG....................................................................................................................... 21 2 4 0.25 1 1 0 0 0 0 0
..................................................CAAGAGTACTGTTGGGACTAGGGTC...................................................................................................................... 25 1 4 0.25 1 0 0 0 1 0 0
..................................................TAAGAGTACTGTTGGGACTAG.......................................................................................................................... 21 1 4 0.25 1 1 0 0 0 0 0
......................................TAAATTAAAGGACAAGAGTACTGTTGG................................................................................................................................ 27 1 4 0.25 1 1 0 0 0 0 0
................................................GACAAGAGTACTGTTGGGACTAGGA........................................................................................................................ 25 1 4 0.25 1 1 0 0 0 0 0
.................................................ACAAGAGTACTGTTGGGACTAGGGGC...................................................................................................................... 26 0 4 0.25 1 1 0 0 0 0 0
..................................................AAAGAGTACTGTTGGGACTAGG......................................................................................................................... 22 1 4 0.25 1 0 0 1 0 0 0
..................................................CAAGAGTACTGTTGGGACTAGGTAA...................................................................................................................... 25 3 4 0.25 1 1 0 0 0 0 0
...........................................TAACGGACAAGAGTACTGTTGGGA.............................................................................................................................. 24 0 4 0.25 1 0 0 0 1 0 0
..................................................CAAGAGTACTACTGGGACTAGGGG....................................................................................................................... 24 2 4 0.25 1 1 0 0 0 0 0
..................................................CAAGAGTACTGTTGGGACTAGGC........................................................................................................................ 23 1 4 0.25 1 1 0 0 0 0 0
......................................TAAATTAACGGACAAGAGTACTG.................................................................................................................................... 23 0 4 0.25 1 1 0 0 0 0 0
..................................................CAAGAGTAGTGTGGGGACTAGGG........................................................................................................................ 23 2 4 0.25 1 1 0 0 0 0 0
..................................................AAAGAGTACTGTTGGGACTAGTGGC...................................................................................................................... 25 2 4 0.25 1 1 0 0 0 0 0
.................................TAACTTAAATTAACGGACAAGAG......................................................................................................................................... 23 0 4 0.25 1 1 0 0 0 0 0
..................................................CAAGAGTACTGTTGGAACTAGG......................................................................................................................... 22 1 4 0.25 1 0 0 1 0 0 0
..................................................CAAGAGTACTGTTGGGCCTAGGGG....................................................................................................................... 24 1 4 0.25 1 0 0 1 0 0 0
..................................................CAAGAGCACTGTTGGGACTAGG......................................................................................................................... 22 1 4 0.25 1 1 0 0 0 0 0
.....................................ATAAATTAACGGACAAGAGTACTGTTGG................................................................................................................................ 28 1 4 0.25 1 1 0 0 0 0 0
.....................................TTAAATTAACGGACAAGAGTACTG.................................................................................................................................... 24 0 4 0.25 1 1 0 0 0 0 0
..........................................TTAACGGACAAGAGTACTGTTGGGAC............................................................................................................................. 26 0 4 0.25 1 1 0 0 0 0 0
.................................................GCAAGAGTACTGTTGGGACTAGG......................................................................................................................... 23 1 4 0.25 1 1 0 0 0 0 0
...................................................AAGAGTACAGTTGGGACTAGGGGC...................................................................................................................... 24 1 4 0.25 1 1 0 0 0 0 0
..................................................CAAGAGTGCTGTTGGGACTAGGGGC...................................................................................................................... 25 1 4 0.25 1 1 0 0 0 0 0
.....................................................GAGTACTGTTGGGACTAGGGG....................................................................................................................... 21 0 4 0.25 1 1 0 0 0 0 0
...................................................AAGAGTACTGTTGGGACTACGGGC...................................................................................................................... 24 1 4 0.25 1 1 0 0 0 0 0
..................................................CAAGAGTACTGTTGGGAATAGG......................................................................................................................... 22 1 4 0.25 1 0 0 1 0 0 0
...........................TATATTTAACTTAAATTAACGGACAAGAG......................................................................................................................................... 29 0 4 0.25 1 1 0 0 0 0 0
..................................................CAAGATTACTGTTGGGACTAGGGG....................................................................................................................... 24 1 4 0.25 1 1 0 0 0 0 0
..................................................CAAGAGTACTGTTTGGACTAGGGG....................................................................................................................... 24 1 4 0.25 1 1 0 0 0 0 0
..................................................CAAGAGTAATGTTGGGACTAGGGGC...................................................................................................................... 25 1 4 0.25 1 1 0 0 0 0 0
...................................................AAGAGTACTGTTGGGACTAGGGGT...................................................................................................................... 24 1 4 0.25 1 0 1 0 0 0 0
.................................................CCAAGAGTACTGTTGGGACTAGGGT....................................................................................................................... 25 2 4 0.25 1 1 0 0 0 0 0
..................................................AAAGAGTACTGTTGGGACTAG.......................................................................................................................... 21 1 4 0.25 1 1 0 0 0 0 0
............................................AACGGACAAGAGTACTGTTGGGAC............................................................................................................................. 24 0 4 0.25 1 1 0 0 0 0 0
......................................................AGCACTATTTGGACTAGGGGC...................................................................................................................... 21 3 4 0.25 1 0 1 0 0 0 0
............................................AACGGACAAGAGTACTGTTGGGACTAG.......................................................................................................................... 27 0 4 0.25 1 1 0 0 0 0 0
..................................................CAAGAGTACTGTTGGGACA............................................................................................................................ 19 1 4 0.25 1 1 0 0 0 0 0
..................................................CAAGAGGACTGTTGGGTCGAGGG........................................................................................................................ 23 3 4 0.25 1 0 0 1 0 0 0
..................................................CAAGAGTACTTTTGGGACTAGGGGC...................................................................................................................... 25 1 4 0.25 1 1 0 0 0 0 0
...............................................................................................TCCGTCTGCTCCTTCCGCCT.............................................................................. 20 0 12 0.25 3 3 0 0 0 0 0
..................................................CAAGAGTACTGTTGGGACTAGGGGA...................................................................................................................... 25 1 4 0.25 1 1 0 0 0 0 0
..................................................CAAGAGTATTGTTGGGACTAG.......................................................................................................................... 21 1 4 0.25 1 1 0 0 0 0 0
....................................................CAAGTACTGTTGGGACTAGGGG....................................................................................................................... 22 2 4 0.25 1 1 0 0 0 0 0
.......................................................CTACTGTTGGGACTAGGG........................................................................................................................ 18 1 4 0.25 1 1 0 0 0 0 0
..................................................CAAGAGTACTGTTAGGACTAGGGG....................................................................................................................... 24 1 4 0.25 1 1 0 0 0 0 0
..................................................CAAGAGTACTGTTGGTACTAGGG........................................................................................................................ 23 1 4 0.25 1 1 0 0 0 0 0
..................................................CGAGAGTACTGTTGGGACTAGGGG....................................................................................................................... 24 1 4 0.25 1 1 0 0 0 0 0
.......................................AAATTAACGGACAAGAGTACTGT................................................................................................................................... 23 0 4 0.25 1 1 0 0 0 0 0
..................................................CAAGAGTACTGTTGGGACTTGGG........................................................................................................................ 23 1 4 0.25 1 1 0 0 0 0 0
..................................................CAAGAGTACTGTTGTGACTAGGGGC...................................................................................................................... 25 1 4 0.25 1 1 0 0 0 0 0
..................................................CAAGAGTACTGTTGGGACTAGGAT....................................................................................................................... 24 2 4 0.25 1 1 0 0 0 0 0
...................................................AAGAGTACTGTTGGGACTAGGT........................................................................................................................ 22 1 4 0.25 1 1 0 0 0 0 0
..................................................CAAGAGTAATGTTGGGACTAGTG........................................................................................................................ 23 2 4 0.25 1 1 0 0 0 0 0
..................................................CAAGAGAACTGTTGGGACTAGG......................................................................................................................... 22 1 4 0.25 1 1 0 0 0 0 0
......................................TAAATTAACGGACAAGAGTACTGTT.................................................................................................................................. 25 0 4 0.25 1 1 0 0 0 0 0
..................................................CAAGAGTACTATTGGGACTAGG......................................................................................................................... 22 1 4 0.25 1 0 0 1 0 0 0
..................................................CAAGAGTATTGTTGGGACTAAGG........................................................................................................................ 23 2 4 0.25 1 1 0 0 0 0 0
.............................................ACGGACAAGAGTACTGTTGGGACG............................................................................................................................ 24 1 4 0.25 1 0 1 0 0 0 0
.............................................ACGGACAAGAGTACTGTTGGGACTA........................................................................................................................... 25 0 4 0.25 1 1 0 0 0 0 0
....................................................AGAGCACTATTTGGACTAGGGGC...................................................................................................................... 23 3 4 0.25 1 0 0 0 1 0 0
..................................................TAAGAGTACTGTTGGGACTAGGGG....................................................................................................................... 24 1 4 0.25 1 1 0 0 0 0 0
.......................................................CCACTGTTTGGACTAGGGGC...................................................................................................................... 20 3 14 0.21 3 0 2 0 1 0 0
..........................................GTAACGGACAGGGGTACTGTTG................................................................................................................................. 22 3 5 0.20 1 0 0 0 1 0 0
..................................................CAAGAGTACTTTTGGGACTAGG......................................................................................................................... 22 1 5 0.20 1 1 0 0 0 0 0
..................................................CAGGAGTACTGTTGGGACTAGGGG....................................................................................................................... 24 1 5 0.20 1 1 0 0 0 0 0
....................................................AGAGCACTGTTTGGACTAGG......................................................................................................................... 20 2 5 0.20 1 0 0 1 0 0 0
....................................................AGAGCACTGTTTGGACTAG.......................................................................................................................... 19 2 5 0.20 1 0 1 0 0 0 0
............................................................................................TACTCCGTCTGCTCCTTCCGCCTT............................................................................. 24 0 11 0.18 2 2 0 0 0 0 0
...............................................................................................TCCGTCTGCTCCTTCCGCCTTCT........................................................................... 23 0 11 0.18 2 2 0 0 0 0 0
...............................................................................................TCCGTCTGCTCCTTCCGCCTT............................................................................. 21 0 11 0.18 2 2 0 0 0 0 0
...............................................................................................TCCGTCTGCTCCTTCCGCC............................................................................... 19 0 12 0.17 2 2 0 0 0 0 0
....................................................AGAGCTCTGTTTGGACTAGGG........................................................................................................................ 21 3 6 0.17 1 0 1 0 0 0 0
......................................................AGCACTATTTGGACTAGGGG....................................................................................................................... 20 3 6 0.17 1 1 0 0 0 0 0
..................................................CAAGAGTAGTGTTGGGACAAA.......................................................................................................................... 21 3 6 0.17 1 1 0 0 0 0 0
........................................................CACTATTTGGACTAGGGGC...................................................................................................................... 19 3 19 0.16 3 0 3 0 0 0 0
.........................................................ACTGTTTGGACTAGGGAC...................................................................................................................... 18 2 7 0.14 1 0 1 0 0 0 0
........................................................TACTGTTGGGACTAGGAA....................................................................................................................... 18 2 7 0.14 1 1 0 0 0 0 0
...................................................AAGAGCACTATTTGGACTAGG......................................................................................................................... 21 3 7 0.14 1 1 0 0 0 0 0
...................................................................................................TCTGCTCCTTCCGCCTTCTCTC........................................................................ 22 0 14 0.14 2 2 0 0 0 0 0
.........................................................ACTGTTTGGATTAGGGGC...................................................................................................................... 18 2 8 0.13 1 1 0 0 0 0 0
.........................................................TCTGTTTGGACTAGGGGC...................................................................................................................... 18 2 17 0.12 2 0 2 0 0 0 0
...........................................................................................................................AGGACCTAAGCGTTCGCATCAA................................................ 22 1 10 0.10 1 1 0 0 0 0 0
.........................................................................................................................AAAGGACCTAAGCGTTCGCATCAA................................................ 24 2 10 0.10 1 1 0 0 0 0 0
............................................................GTTGGGTTTAGGGGCTCC................................................................................................................... 18 2 10 0.10 1 0 0 0 1 0 0
...............................................................................................TCCGTCTGCTCCTTCCGCCTTCTCTC........................................................................ 26 0 11 0.09 1 1 0 0 0 0 0
............................................................................................TACTCCGTCTGCTCCTTCCGCCTTCT........................................................................... 26 0 11 0.09 1 1 0 0 0 0 0
..........................................................................................CCTACTCCGTCTGCTCCTTC................................................................................... 20 0 11 0.09 1 0 0 1 0 0 0
................................................................................................CCGTCTGCTCCTTCCGCCTTCTC.......................................................................... 23 0 12 0.08 1 1 0 0 0 0 0
................................................................................................CCGTCTGCTCCTTCCGCCTTC............................................................................ 21 0 12 0.08 1 1 0 0 0 0 0
...............................................................................................TCCGTCTGATCCTTCCGCCTTC............................................................................ 22 1 12 0.08 1 1 0 0 0 0 0
...........................................................................................CTACTCCGTCTGCTCCTTCC.................................................................................. 20 0 13 0.08 1 1 0 0 0 0 0
............................................................................................TACTCCGTCTGCTCCTTCC.................................................................................. 19 0 13 0.08 1 1 0 0 0 0 0
.......................................................................................................CTCCTTCCGCCTTCTCTC........................................................................ 18 0 14 0.07 1 1 0 0 0 0 0
...................................................................................................TCTGCTCCTTCCGCCTTCAA.......................................................................... 20 2 14 0.07 1 1 0 0 0 0 0
...................................................................................................TCTGCTCCTTCCGCCTTCTC.......................................................................... 20 0 14 0.07 1 1 0 0 0 0 0
...........................................................TGTTTGGACTAGGGGCAC.................................................................................................................... 18 2 16 0.06 1 0 1 0 0 0 0
.....................................................................ACGGCCTCCGCTGCGTGAA......................................................................................................... 19 3 20 0.05 1 0 0 0 1 0 0
........................................................CACTGTCTGGACTAGGGGC...................................................................................................................... 19 3 20 0.05 1 0 1 0 0 0 0

Anti-sense strand reads

AACGAGATATTATATATGATATGCTAAATATAAATTGAATTTAATTGCCTGTTCTCATGACAACCCTGATCCCCGAGGCGACGCACATGTGGATGAGGCAGACGAGGAAGGCGGAAGAGAGGTACCTGGATTCGCAAGCGTAGTTTCGATCTCCGCTCTGAGAGCGGCCGGCGAAGGGTGTGGAAGCTCAGAC
**********************************************************.((((..((...(((...(((....((..(((..((((((......(((.(((....)))..)))..)))))))))))...))))))...))..))))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V111
male body		 V057
head
...................................TGAATTTAATTGCCTGTTCTCATGA..................................................................................................................................... 25 0 4 1.25 5 5 0 0
....................................GAATTTAATTGCCTGTTCTCATGA..................................................................................................................................... 24 0 4 1.25 5 5 0 0
.............................................................................................................GGCGGAAGAGAGGTACCTGGA............................................................... 21 0 1 1.00 1 1 0 0
....................................GAATTTAATTGCCTGTTCTCATG...................................................................................................................................... 23 0 4 0.25 1 1 0 0
........................................TTAATTGCCTGTTCTCATGACAAC................................................................................................................................. 24 0 4 0.25 1 1 0 0
.............................................TGCCTGTTCTCATGACAACCCTGAT........................................................................................................................... 25 0 4 0.25 1 1 0 0
....................................................................................................GACGAGGAAGGCGGAAGAGAGGT...................................................................... 23 0 14 0.14 2 2 0 0
.................................................................................................GCAGACGGGCAAGGCGGTAG............................................................................ 20 3 20 0.10 2 0 2 0
.............................................................................................................................CTGGATTCGCAAGCGTAGT................................................. 19 0 13 0.08 1 1 0 0
...................................................................................................AGACGAGGAAGGCGGAAGAGAGGT...................................................................... 24 0 14 0.07 1 1 0 0
.........................................................................................................................................GCGTAGTTTCCACCTCCACT.................................... 20 3 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_7563:1015-1207 + dpe_100 TTG-CTCTATAATATATACTATACGATTTATATTT--AACTTAAATTAACGGA-CAAGAGTACTGTTGGGACTAGGGGCTCCGC---------------------------------TG----CGTGTACACCTACTCCGTCTGCTCCTTCCGCCTTCTCTCCATGGACCTAAGCGTTCGCATCAAAGCTAGAGGCGAGA-CTCTCGCCGGCCGCTTCCCACACCTTCGAGTCTG
dp5 Unknown_singleton_2799:12123-12347 - TTG-CTCTATAATATATACTATACAATTTATATTT--AACTTAAATTAACGGA-CAAGAGTACTGTTGGGACTAGGGGCCCCGCGGACTGCGGTACTGCCGCAAAGCATTGCTTCGCAGTG-GCGTGGACACCTACTCCGTCTGCTCCTTCCGCCTTCTCTCCAAGGACCTAAGCGTTCGCATCA-CGATAGAGGC--GAACTC-CGCA-GCCGCTTCCCACCTCTTCGGGTCTG
droKik1 scf7180000301163:9896-10099 - TACACTTAACAA----TACTATACAACTTAGACATTAG----ACATTAACGAGGCAA-----------------AGC-GCCCGCATTTTGCGGTACGGCCGCAAAGCAATGCTTCGCACAATGGAAGGCCACTCTGTCAGTCTGCTCATTCCTCCTTCTTTCCAGCGACCTGAGGGATTTCATCA-GCTTAGCCGA--GAATTC-CGCC-ACCGCGTCCTACGTCCTTTGGTCCG
droFic1 scf7180000454038:558698-558720 - TTG-AATTGCAATCTAAACAAGAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 2l:3582296-3582339 - TTG-TTCAATTATATATATAAATGTATATATAATT--AGCTTAATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
TTG-CTCTATAATATATACTATACGATTTATATTT--AACTTAAATTAACGGA-CAAGAGTACTGTTGGGACTAGGGGCTCCGC---------------------------------TG----CGTGTACACCTACTCCGTCTGCTCCTTCCGCCTTCTCTCCATGGACCTAAGCGTTCGCATCAAAGCTAGAGGCGAGA-CTCTCGCCGGCCGCTTCCCACACCTTCGAGTCTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................CAAGAGTACTGTTGGGACTAGGG..............................................................................................................................................................234153.00612156539016
......................................................CAAGAGTACTGTTGGGACTAGGGG.............................................................................................................................................................244142.00568155330011
......................................................CAAGAGTACTGTTGGGACTAGG...............................................................................................................................................................224117.00468045810000
......................................................CAAGAGTACTGTTGGGACTAGGGGC............................................................................................................................................................25436.75147311410029
.......................................................AAGAGTACTGTTGGGACTAGGGG.............................................................................................................................................................23416.25650650000
.......................................................AAGAGTACTGTTGGGACTAGGG..............................................................................................................................................................22414.75590572000
......................................................CAAGAGTACTGTTGGGACTAG................................................................................................................................................................21414.75591580000
.......................................................AAGAGTACTGTTGGGACTAGG...............................................................................................................................................................21413.00520520000
.......................................................AAGAGTACTGTTGGGACTAGGGGC............................................................................................................................................................2444.25172150000
......................................................CAAGAGTACTGTTGGGACTAGGGA.............................................................................................................................................................2443.0012390000
.......................................................AAGAGTACTGTTGGGACTAG................................................................................................................................................................2042.75110110000
......................................................CAAGAGTACTGTTGGGACTAGGT..............................................................................................................................................................2342.008080000
.........................................TAAATTAACGGA-CAAGAGTACTGT.........................................................................................................................................................................2441.506032001
........................................................AGAGTACTGTTGGGACTAGGGG.............................................................................................................................................................2241.506060000
......................................................CAAGAGTACTGTTGGGAC...................................................................................................................................................................1841.255320000
........................................................AGAGTACTGTTGGGACTAGG...............................................................................................................................................................2041.255050000
......................................................CAAGAGTACTGTTGGGACTAGGGT.............................................................................................................................................................2441.255050000
......................................................CAAGAGTACTGTTGGGACT..................................................................................................................................................................1941.255221000
......................................................CAAGAGTACTGTTGGGACTAGGGAA............................................................................................................................................................2541.255410000
......................................................CAAGAGTACTGTTGGGACTAGGA..............................................................................................................................................................2341.004040000
..............................................TAACGGA-CAAGAGTACTGTTGGGAC...................................................................................................................................................................2541.004040000
....................................................A-CAAGAGTACTGTTGGGACTAGGG..............................................................................................................................................................2441.004040000
......................................................CAAGAGTACTGTTGGGACTA.................................................................................................................................................................2041.004040000
.........................................TAAATTAACGGA-CAAGAGTACTGTTG.......................................................................................................................................................................2640.753210000
......................................................CAAGAGTACTGTTGGGACTAGGGGT............................................................................................................................................................2540.753120000
......................................................CAAGAGTACTGTTGGGACTAGT...............................................................................................................................................................2240.753030000
....................................................A-CAAGAGTACTGTTGGGACTAGGGG.............................................................................................................................................................2540.753030000
................................................ACGGA-CAAGAGTACTGTTGGGAC...................................................................................................................................................................2340.753030000
..............................................TAACGGA-CAAGAGTACTGTTGGGACT..................................................................................................................................................................2640.502110000
................................................ACGGA-CAAGAGTACTGTTGGGA....................................................................................................................................................................2240.502020000
...........................................................GTACTGTTGGGACTAGGGG.............................................................................................................................................................1940.502020000
........................................................AGAGTACTGTTGGGACTAGGG..............................................................................................................................................................2140.502020000
......................................................CAAGAGTACTGTTGGGACTAGGGC.............................................................................................................................................................2440.502020000
.........................................................GAGTACTGTTGGGACTAGG...............................................................................................................................................................1940.502020000
........................................................................................................................................TCCGTCTGCTCCTTCCGCCTTCTCT..........................................................................25110.364040000
............................................................................................................................................TCTGCTCCTTCCGCCTTCTCT..........................................................................21140.294040000
................................................ACGGA-CAAGAGTACTGTTGGGACT..................................................................................................................................................................2440.251100000
..................................................GGA-CAAGAGTACTGTTGGGACTAGG...............................................................................................................................................................2540.251010000
......................................................CAAGAGTACTGTTGGGACTAGGAA.............................................................................................................................................................2440.251010000
..........................................................AGTACTGTTGGGACTAGGGG.............................................................................................................................................................2040.251010000
.......................................................AAGAGTACTGTTGGGACTAGTAA.............................................................................................................................................................2340.251010000
......................................................CAAGAGTACTGTTGGGACTAGGGAAA...........................................................................................................................................................2640.251010000
.........................................TAAATTAACGGA-CAAGAGTACTGTTGG......................................................................................................................................................................2740.251010000
...................................................GA-CAAGAGTACTGTTGGGACTAGGA..............................................................................................................................................................2540.251010000
....................................................A-CAAGAGTACTGTTGGGACTAGGGGC............................................................................................................................................................2640.251010000
......................................................CAAGAGTACTGTTGGGACTAGGTAA............................................................................................................................................................2540.251010000
..............................................TAACGGA-CAAGAGTACTGTTGGGA....................................................................................................................................................................2440.251000001
......................................................CAAGAGTACTGTTGGGACTAGGC..............................................................................................................................................................2340.251010000
.........................................TAAATTAACGGA-CAAGAGTACTG..........................................................................................................................................................................2340.251010000
..................................T--AACTTAAATTAACGGA-CAAGAG...............................................................................................................................................................................2340.251010000
........................................TTAAATTAACGGA-CAAGAGTACTG..........................................................................................................................................................................2440.251010000
.............................................TTAACGGA-CAAGAGTACTGTTGGGAC...................................................................................................................................................................2640.251010000
.........................................................GAGTACTGTTGGGACTAGGGG.............................................................................................................................................................2140.251010000
............................TATATTT--AACTTAAATTAACGGA-CAAGAG...............................................................................................................................................................................2940.251010000
.......................................................AAGAGTACTGTTGGGACTAGGGGT............................................................................................................................................................2440.251100000
...............................................AACGGA-CAAGAGTACTGTTGGGAC...................................................................................................................................................................2440.251010000
...............................................AACGGA-CAAGAGTACTGTTGGGACTAG................................................................................................................................................................2740.251010000
......................................................CAAGAGTACTGTTGGGACA..................................................................................................................................................................1940.251010000
........................................................................................................................................TCCGTCTGCTCCTTCCGCCT...............................................................................20120.253030000
......................................................CAAGAGTACTGTTGGGACTAGGGGA............................................................................................................................................................2540.251010000
..........................................AAATTAACGGA-CAAGAGTACTGT.........................................................................................................................................................................2340.251010000
......................................................CAAGAGTACTGTTGGGACTAGGAT.............................................................................................................................................................2440.251010000
.......................................................AAGAGTACTGTTGGGACTAGGT..............................................................................................................................................................2240.251010000
.........................................TAAATTAACGGA-CAAGAGTACTGTT........................................................................................................................................................................2540.251010000
................................................ACGGA-CAAGAGTACTGTTGGGACG..................................................................................................................................................................2440.251100000
................................................ACGGA-CAAGAGTACTGTTGGGACTA.................................................................................................................................................................2540.251010000
.....................................................................................................................................TACTCCGTCTGCTCCTTCCGCCTT..............................................................................24110.182020000
........................................................................................................................................TCCGTCTGCTCCTTCCGCCTTCT............................................................................23110.182020000
........................................................................................................................................TCCGTCTGCTCCTTCCGCCTT..............................................................................21110.182020000
........................................................................................................................................TCCGTCTGCTCCTTCCGCC................................................................................19120.172020000
............................................................TACTGTTGGGACTAGGAA.............................................................................................................................................................1870.141010000
............................................................................................................................................TCTGCTCCTTCCGCCTTCTCTC.........................................................................22140.142020000
........................................................................................................................................TCCGTCTGCTCCTTCCGCCTTCTCTC.........................................................................26110.091010000
.....................................................................................................................................TACTCCGTCTGCTCCTTCCGCCTTCT............................................................................26110.091010000
...................................................................................................................................CCTACTCCGTCTGCTCCTTC....................................................................................20110.091001000
.........................................................................................................................................CCGTCTGCTCCTTCCGCCTTCTC...........................................................................23120.081010000
.........................................................................................................................................CCGTCTGCTCCTTCCGCCTTC.............................................................................21120.081010000
....................................................................................................................................CTACTCCGTCTGCTCCTTCC...................................................................................20130.081010000
.....................................................................................................................................TACTCCGTCTGCTCCTTCC...................................................................................19130.081010000
................................................................................................................................................CTCCTTCCGCCTTCTCTC.........................................................................18140.071010000
............................................................................................................................................TCTGCTCCTTCCGCCTTCAA...........................................................................20140.071010000
............................................................................................................................................TCTGCTCCTTCCGCCTTCTC...........................................................................20140.071010000
dp5
TTG-CTCTATAATATATACTATACAATTTATATTT--AACTTAAATTAACGGA-CAAGAGTACTGTTGGGACTAGGGGCCCCGCGGACTGCGGTACTGCCGCAAAGCATTGCTTCGCAGTG-GCGTGGACACCTACTCCGTCTGCTCCTTCCGCCTTCTCTCCAAGGACCTAAGCGTTCGCATCA-CGATAGAGGC--GAACTC-CGCA-GCCGCTTCCCACCTCTTCGGGTCTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................TCTCCAAGGACCTAAGCGTTCGCAT....................................................254565.5022620190461060728310
..............................................................................................................................................................TCTCCAAGGACCTAAGCGTTCGCA.....................................................244242.009680921507023300
.......................................................................................................................................................................................CA-CGATAGAGGC--GAACTC-CGCA-GC.......................242207.5041502109020019400
......................................................................................................................................................................................TCA-CGATAGAGGC--GAACTC-CGCA-GC.......................252206.004120889030031200
..............................................................................................................................................................TCTCCAAGGACCTAAGCGTTCGCATCA-.................................................274145.005800515916034600
..............................................................................................................................................................TCTCCAAGGACCTAAGCGTTCGCATC...................................................264116.7546703707903021300
..............................................................................................................................................................TCTCCAAGGACCTAAGCGTTCGC......................................................234109.2543704091205011000
.......................................................................................................................................................................................CA-CGATAGAGGC--GAACTC-CGCA-G........................23289.001780117202005700
..............................................TAACGGA-CAAGAGTACTGTTGGGAC...................................................................................................................................................................25281.00162078400008000
.......................................................................................................................................................................................CA-CGATAGAGGC--GAACTC-CGCA-GCC......................25263.00126051500007000
..............................TATTT--AACTTAAATTAACGGA-CAAGAG...............................................................................................................................................................................27361.67185020000018300
......................................................................................................................................................................................TCA-CGATAGAGGC--GAACTC-CGCA-G........................24255.00110041000006900
.......................................................................................................................................................................................CA-CGATAGAGGC--GAACTC-CGCA-GCCGC....................27252.00104031500006800
.......................................................................................................................................................................................CA-CGATAGAGGC--GAACTC-CGCA-GCCG.....................26247.5095059300003300
..............................................................................................................................................................TCTCCAAGGACCTAAGCGTTCG.......................................................22440.25161015900200000
...............................................................................................................................................................CTCCAAGGACCTAAGCGTTCGCAT....................................................24440.25161016100000000
..................................T--AACTTAAATTAACGGA-CAAGAG...............................................................................................................................................................................23336.67110020000010800
.............................................................................................................................................................................................TAGAGGC--GAACTC-CGCA-GCCGCTT..................24436.25145013240300600
..................................T--AACTTAAATTAACGGA-CAAGAGTAC............................................................................................................................................................................26333.6710106100009400
..............................................................................................................................................................TCTCCAAGGACCTAAGCGTTCGCATA...................................................26429.25117096402011400
...............................................................................................................CTTCGCAGTG-GCGTGGACACCTACTC.................................................................................................26328.008407610000700
.TG-CTCTATAATATATACTATACAATT...............................................................................................................................................................................................................26225.005001000004900
...............................................................................................................CTTCGCAGTG-GCGTGGACACCTA....................................................................................................23323.337006810100000
..............................................................................................................................................................TCTCCAAGGACCTAAGCGTTCGCAA....................................................25423.259309210000000
..........................................................................................................CATTGCTTCGCAGTG-GCGTGGAC.........................................................................................................23821.631730139290500000
...............................................................................................................CTTCGCAGTG-GCGTGGACACCTACT..................................................................................................25319.335805210000500
..............................................TAACGGA-CAAGAGTACTGTTGGGA....................................................................................................................................................................24319.3358039001001800
............................................................TACTGTTGGGACTAGGGGCCCCGC.......................................................................................................................................................24119.001905000001400
......................................................................................................................................................................................TCA-CGATAGAGGC--GAACTC-CGCA-GCC......................26218.503706300002800
...............................................................................................................CTTCGCAGTG-GCGTGGACACCTAC...................................................................................................24318.335505210000200
..........................................................................................................CATTGCTTCGCAGTG-GCGTGGACA........................................................................................................24317.675305300000000
..............................................TAACGGA-CAAGAGTACTGTTGGG.....................................................................................................................................................................23315.6747035000001200
...............................................................................................................................................................CTCCAAGGACCTAAGCGTTCGCA.....................................................23415.256106100000000
......................................................................................................................................................................................TCA-CGATAGAGGC--GAACTC-CGCA-GCCG.....................27215.003009100002000
..............................................................................................................................................................TCTCCAAGGACCTAAGCGTTCGCATCA-C................................................28414.755904910000900
......................................................................................................................................................................................TCA-CGATAGAGGC--GAACTC-CGCA-GCCGC....................28214.002804000002400
.............................................................................................................TGCTTCGCAGTG-GCGTGGACACCTA....................................................................................................25313.334004000000000
............................................................TACTGTTGGGACTAGGGG.............................................................................................................................................................18113.001302000001100
...................................................GA-CAAGAGTACTGTTGGGACTAGGG..............................................................................................................................................................25212.502500000002500
.............................................TTAACGGA-CAAGAGTACTGTTGGGAC...................................................................................................................................................................26212.502505200001800
............................TATATTT--AACTTAAATTAACGGA-CA...................................................................................................................................................................................25311.673501000003400
.........................................TAAATTAACGGA-CAAGAGTACTGT.........................................................................................................................................................................24311.333404000003000
..............................................................................................................................................................TCTCCAAGGACCTAAGCGTTCGCATT...................................................26411.004403930200000
.............................................................................................................................................................................................TAGAGGC--GAACTC-CGCA-GCCGCT...................23411.004403440300300
..........................................................................................................CATTGCTTCGCAGTG-GCGTGGACAC.......................................................................................................25310.333102740000000
..........................................................................................................CATTGCTTCGCAGTG-GCGTGGA..........................................................................................................22810.258207810300000
.........................................TAAATTAACGGA-CAAGAGTACTGTTG.......................................................................................................................................................................26310.003001000002900
............................................................TACTGTTGGGACTAGGGGCCCCGCG......................................................................................................................................................25110.00100400000600
.............................................................................................................................................................................................TAGAGGC--GAACTC-CGCA-GCCGCTTC.................25310.003002620100100
.................................TT--AACTTAAATTAACGGA-CAAGAG...............................................................................................................................................................................24310.003000000003000
.............................................................................................................................................................................................TAGAGGC--GAACTC-CGCA-GCCG.....................2149.753903610200000
....................................................A-CAAGAGTACTGTTGGGACTAGGGG.............................................................................................................................................................2519.0090000000900
................................................ACGGA-CAAGAGTACTGTTGGGACTAG................................................................................................................................................................2628.501700000001700
...............................................................................................................................................................CTCCAAGGACCTAAGCGTTCGC......................................................2248.503403400000000
...............................................AACGGA-CAAGAGTACTGTTGGGAC...................................................................................................................................................................2428.501701300000400
...............................................................................................................................................................CTCCAAGGACCTAAGCGTTCGCATCA-.................................................2648.253303300000000
......................................................................................................................................................................................TCA-CGATAGAGGC--GAACTC-CGCA-.........................2328.00160700000900
...................................................GA-CAAGAGTACTGTTGGGACTAGG...............................................................................................................................................................2428.001601000001500
.....................................................................................................................................................................................ATCA-CGATAGAGGC--GAACTC-CGCA-GC.......................2627.501505000001000
........................................................................................................................................................................................A-CGATAGAGGC--GAACTC-CGCA-GC.......................2327.001401000000400
............................................................TACTGTTGGGACTAGGGGC............................................................................................................................................................1917.0070000000700
.............................................................................................................TGCTTCGCAGTG-GCGTGGACACC......................................................................................................2337.002102100000000
.TG-CTCTATAATATATACTATACAATTTA.............................................................................................................................................................................................................2826.501301000001200
..........................................................................................................CATTGCTTCGCAGTG-GCGTGGACACC......................................................................................................2636.331901810000000
..............................................................................................................................................................TCTCCAAGGACCTAAGCGTTC........................................................2146.252502010300100
.TG-CTCTATAATATATACTATACAAT................................................................................................................................................................................................................2526.00120300000900
..........................................................................................................................................................................TAAGCGTTCGCATCA-CGATAGAGGC--.....................................2526.001201000200000
............................................................TACTGTTGGGACTAGGGGCCC..........................................................................................................................................................2116.0060000100500
.............................................................................................................TGCTTCGCAGTG-GCGTGGAC.........................................................................................................2085.884704700000000
..............................................................................................................................................................TCTCCAAGGACCTAAGCGTT.........................................................2045.752302200100000
.............................................................................................................TGCTTCGCAGTG-GCGTGGACA........................................................................................................2135.671701700000000
...............................................................................................................................................................CTCCAAGGACCTAAGCGTTCGCATC...................................................2545.252102100000000
.......................................................................................................................................................................................CA-CGATAGAGGC--GAACTC-CGC...........................2125.00100900000100
..............................................TAACGGA-CAAGAGTACTGTTGG......................................................................................................................................................................2235.001501400000100
....................................................A-CAAGAGTACTGTTGGGACTAGGGGC............................................................................................................................................................2615.0050000000500
................................................................................................................................................................TCCAAGGACCTAAGCGTTCGCATCA-CGA..............................................2815.0050400000100
.............................................................................................................................................................................................TAGAGGC--GAACTC-CGCA-GCCGC....................2244.751901500300100
..............................................................................................................................................................TCTCCAAGGACCTAAGCGTTCGCATCA-A................................................2844.751901900000000
...............................................................................................................CTTCGCAGTG-GCGTGGACACCT.....................................................................................................2234.671401400000000
.............................................................................................................TGCTTCGCAGTG-GCGTGGACACCTAC...................................................................................................2634.671401400000000
................................................ACGGA-CAAGAGTACTGTTGGGACTA.................................................................................................................................................................2524.5090000000900
................................................ACGGA-CAAGAGTACTGTTGGGACT..................................................................................................................................................................2424.5090100000800
....................................................A-CAAGAGTACTGTTGGGACTAGGG..............................................................................................................................................................2424.5090000000900
......................................................................................................................................................................................................GAACTC-CGCA-GCCGCTTCCCACCTC..........2524.5090900000000
.......................................................................................................................................................................................CA-CGATAGAGGC--GAACTC-CGCA-.........................2224.5090600000300
................................TTT--AACTTAAATTAACGGA-CAAGAG...............................................................................................................................................................................2534.331300100001200
...............................................................................................................CTTCGCAGTG-GCGTGGACACC......................................................................................................2134.331301210000000
..............................................................................................................................................................TCTCCAAGGACCTAAGCGTTCGCAC....................................................2544.251701160000000
.............................................................................................................................................................................................TAGAGGC--GAACTC-CGCA-GCCGCTA..................2444.251701500100100
............................................................TACTGTTGGGACTAGGGGCC...........................................................................................................................................................2014.0040000000400
...................................................GA-CAAGAGTACTGTTGGGACTAGGGG.............................................................................................................................................................2614.0040100000300
..............................................................................................................................................................................................AGAGGC--GAACTC-CGCA-GCCGCTT..................2344.001601510000000
..............................................................................................................................................................TCTCCAAGGACCTAAGCGTTCGCAAA...................................................2644.001601400100100
................................................ACGGA-CAAGAGTACTGTTGGGAC...................................................................................................................................................................2324.0080000000800
............................................................TACTGTTGGGACTAGGGGCCCCG........................................................................................................................................................2314.0040100000300
.................................TT--AACTTAAATTAACGGA-CAAGAGTAC............................................................................................................................................................................2733.671100000001100
.............................................................................................................TGCTTCGCAGTG-GCGTGGACACCT.....................................................................................................2433.671101000100000
.............................................................................................................................................................................................TAGAGGC--GAACTC-CGCA-GCCGCTTCC................2633.67110900000200
............................................................TACTGTTGGGACTAGGG..............................................................................................................................................................1723.5070000000700
.............................................................................................................TGCTTCGCAGTG-GCGTGGA..........................................................................................................1983.502802700100000
........................................................................................................................................................................................A-CGATAGAGGC--GAACTC-CGCA-GCCG.....................2523.5070700000000
..........................................................................................................CATTGCTTCGCAGTG-GCGTGG...........................................................................................................2183.382702500200000
...............................ATTT--AACTTAAATTAACGGA-CAAGAG...............................................................................................................................................................................2633.331000000001000
.............................................................................................................................................................................................TAGAGGC--GAACTC-CGCA-GCC......................2043.251301210000000
.......................................................................................................................................................................................CA-CGATAGAGGC--GAACTC-CGCA-GCCGT....................2723.0060300000300
...............................................AACGGA-CAAGAGTACTGTTGGG.....................................................................................................................................................................2233.0090900000000
.......................................................................................................................................................................................CA-CGATAGAGGC--GAACTC-CGCA-GCA......................2523.0060200000400
.......................................................................................................................................................................................CA-CGATAGAGGC--GAACTC-CGCA-GCCGCTT..................2923.0060000000600
............................................................TACTGTTGGGACTAGGGGCCCCGT.......................................................................................................................................................2413.0030000000300
............................................................TACTGTTGGGACTAGGGGCCCCGCGG.....................................................................................................................................................2613.0030010000200
..........................................................................................................................................................................TAAGCGTTCGCATCA-CGATAGAGG........................................2423.0060400100100
......................................................CAAGAGTACTGTTGGGACTAGGGG.............................................................................................................................................................2413.0030100000200
............................................................TACTGTTGGGACTAGGGGCCCCGCGGA....................................................................................................................................................2713.0030000000300
................................................ACGGA-CAAGAGTACTGTTGGGACTAGG...............................................................................................................................................................2723.0060000000600
.......................................................................................................................................................................................CA-CGATAGAGGC--GAACTC-CG............................2023.0060500000100
................................................................................................................TTCGCAGTG-GCGTGGACACCTA....................................................................................................2233.0090900000000
.......................................................................................................................................................................................CA-CGATAGAGGC--GAACTC-CGCA-GCCC.....................2623.0060300000300
..............................TATTT--AACTTAAATTAACGGA-CAAGA................................................................................................................................................................................2632.6780100000700
.......................................................................................................................TG-GCGTGGACACCTACTCCGTCTG...........................................................................................2432.6780800000000
..........................................................................................................CATTGCTTCGCAGTG-GCGTGGAA.........................................................................................................2382.632102100000000
.....................................................................................................................................................................................ATCA-CGATAGAGGC--GAACTC-CGCA-G........................2522.5050200000300
..................................................GGA-CAAGAGTACTGTTGGGACT..................................................................................................................................................................2222.5050000000500
.............................................................................................................................................................................................TAGAGGC--GAACTC-CGCA-GC.......................1942.501001000000000
........................................................................................................................................................................................A-CGATAGAGGC--GAACTC-CGCA-GCCGC....................2622.5050100000400
TTG-CTCTATAATATATACTATACAATT...............................................................................................................................................................................................................2722.5050400000100
...............................................................................................................................................................CTCCAAGGACCTAAGCGTTCG.......................................................2142.501001000000000
....................................................A-CAAGAGTACTGTTGGGACTAGG...............................................................................................................................................................2322.5050200000300
........................................................................................................................................................................................A-CGATAGAGGC--GAACTC-CGCA-G........................2222.5050500000000
........................................................................................................................................................................................A-CGATAGAGGC--GAACTC-CGCA-GCC......................2422.5050300000200
..............................................................................................................................................TGCTCCTTCCGCCTTCTCTCCAAGGACC.................................................................2852.401201110000000
.............................................................................................................................................................................................TAGAGGC--GAACTC-CGCA-GCCGCTTCCC...............2732.3370610000000
................................................................................................................TTCGCAGTG-GCGTGGACACCTACTC.................................................................................................2532.3370700000000
...............................................................................................................CTTCGCAGTG-GCGTGGACACCTACTCC................................................................................................2732.3370700000000
.............................................................................................................TGCTTCGCAGTG-GCGTGGACACCTACT..................................................................................................2732.3370600100000
.............................................................................................................TGCTTCGCAGTG-GCGTGGACAC.......................................................................................................2232.3370610000000
................................................................................................................TTCGCAGTG-GCGTGGACACCTACT..................................................................................................2432.3370700000000
...............................................................................................................CTTCGCAGTG-GCGTGGACAC.......................................................................................................2032.3370600100000
...........................................................................................................................................................TTCTCTCCAAGGACCTAAGCGTTCGCA.....................................................2742.2590900000000
.............................................................................................................................................................CTCTCCAAGGACCTAAGCGTTCGCAT....................................................2642.2590900000000
.............................................TTAACGGA-CAAGAGTACTGTTGGG.....................................................................................................................................................................2432.0060400000200
.......................................................AAGAGTACTGTTGGGACTAGGGGCCCCGC.......................................................................................................................................................2912.0020000000200
.............................................TTAACGGA-CAAGAGTACTGTTGGGA....................................................................................................................................................................2532.0060200000400
.............................................TTAACGGA-CAAGAGTACTGTTGG......................................................................................................................................................................2332.0060400000200
......................................................................................................................................................................................TCA-CGATAGAGGC--GAACTC-CGC...........................2222.0040200000200
....................................................................................................................................................................................CATCA-CGATAGAGGC--GAACTC-CGCA-GC.......................2722.0040100000300
...................................................GA-CAAGAGTACTGTTGGGACTAG................................................................................................................................................................2322.0040000000400
..........................................................................................................................................................................................................TC-CGCA-GCCGCTTCCCACCTCTTCGG.....2622.0040400000000
......................................................CAAGAGTACTGTTGGGACTAGGGGCCC..........................................................................................................................................................2712.0020000000200
..............................................TAACGGA-CAAGAGTACTGTTGGGACTA.................................................................................................................................................................2722.0040100000300
....................................................A-CAAGAGTACTGTTGGGACTAGGGGAT...........................................................................................................................................................2712.0020000000200
......................................................CAAGAGTACTGTTGGGACTAGGGGC............................................................................................................................................................2512.0020000000200
........................................................................TAGGGGCCCCGCGGACTGCGGTAC...........................................................................................................................................2461.83110910100000
...............................................................................................................................................................CTCCAAGGACCTAAGCGTTCGCATA...................................................2541.7570700000000
..................................T--AACTTAAATTAACGGA-CAAGAGTACA...........................................................................................................................................................................2731.6750000000500
.............................................................................................................TGCTTCGCAGTG-GCGTGGACACCTACTC.................................................................................................2831.6750500000000
...........................TTATATTT--AACTTAAATTAACGGA-CA...................................................................................................................................................................................2631.6750000000500
..............................................................................................................................................................................................AGAGGC--GAACTC-CGCA-GCCGCTTC.................2431.6750500000000
...............................................................................................................CTTCGCAGTG-GCGTGGACACCTACA..................................................................................................2531.6750500000000
...............................................................................................................CTTCGCAGTG-GCGTGGACACCTACTCCG...............................................................................................2831.6750500000000
...........................................................................................................................CGTGGACACCTACTCCGTCTGCTCC.......................................................................................2531.6750300000200
..............................................................................................................................................................TCTCCAAGGACCTAAGCGT..........................................................1951.6080600000200
.............................................................................................TACTGCCGCAAAGCATTGCTTCG.......................................................................................................................23111.551701500200000
........................................................................TAGGGGCCCCGCGGACTGCGGTA............................................................................................................................................2361.5090200000700
.......................................................................................................................................................................................CA-CGATAGAGGC--GAACTC-CGCA-GT.......................2421.5030300000000
TTG-CTCTATAATATATACTATACAAT................................................................................................................................................................................................................2621.5030110000100
.......................................................................................................................................................................................CA-CGATAGAGGC--GAACTC-CGCA-GCCGCT...................2821.5030300000000
.......................................................................................................................................................................................CA-CGATAGAGGC--GAACTC-CGCA-A........................2321.5030300000000
.............................................................................................................TGCTTCGCAGTG-GCGTGG...........................................................................................................1881.501201200000000
..................................................GGA-CAAGAGTACTGTTGGGACTAGG...............................................................................................................................................................2521.5030000000300
............................................................................................................................................................TCTCTCCAAGGACCTAAGCGTTCGCAT....................................................2741.5060300001200
.....TCTATAATATATACTATACAATT...............................................................................................................................................................................................................2321.5030000000300
................................................................................................................................................................TCCAAGGACCTAAGCGTTCGCATC...................................................2441.5060600000000
.........................................TAAATTAACGGA-CAAGAG...............................................................................................................................................................................1841.5060000000600
......................................................................................................................................................................................TCA-CGATAGAGGC--GAACTC-CG............................2121.5030200000100
.......................................................................................................................................................................................CA-CGATAGAGGC--GAACTC-CGT...........................2121.5030300000000
................................................................................................................................................................TCCAAGGACCTAAGCGTTCGCATCA-CG...............................................2741.5060600000000
..................................................................TGGGACTAGGGGCCCCGCGGACTGC................................................................................................................................................2561.5090100000800
.TG-CTCTATAATATATACTATAC...................................................................................................................................................................................................................2231.3340000000400
..............................................TAACGGA-CAAGAGTACTGTTGGGAA...................................................................................................................................................................2531.3340400000000
.......................................................................................................................TG-GCGTGGACACCTACTCCGTCTGC..........................................................................................2531.3340400000000
..................................................................TGGGACTAGGGGCCCCGCGGAC...................................................................................................................................................2261.3380610000100
...................................................................................................................................................................................................C--GAACTC-CGCA-GCCGCTTCC................2031.3340400000000
.................................TT--AACTTAAATTAACGGA-CAAGAGTA.............................................................................................................................................................................2631.3340000000400
..................................................................TGGGACTAGGGGCCCCGCGGACTG.................................................................................................................................................2461.3380600000200
..................................T--AACTTAAATTAACGGA-CAAGAGTACT...........................................................................................................................................................................2731.3340100000300
...............................................AACGGA-CAAGAGTACTGTTGGGA....................................................................................................................................................................2331.3340400000000
........................................................................TAGGGGCCCCGCGGACTGCGG..............................................................................................................................................2161.3380700000100
.........................................TAAATTAACGGA-CAAGAGTACTG..........................................................................................................................................................................2331.3340100000300
................................................................................................................................................................TCCAAGGACCTAAGCGTTCGCAT....................................................2341.2550400000100
...........................................................................................................ATTGCTTCGCAGTG-GCGTGGAC.........................................................................................................2281.251001000000000
............................................................................................................................................................TCTCTCCAAGGACCTAAGCGTTCGCA.....................................................2641.2550100000400
..............................................................................................................................................................TCTCCAAGGACCTAAGCGTTCGCATCA-CG...............................................2941.2550500000000
..............................................................................................................................................................................................AGAGGC--GAACTC-CGCA-GCCGCT...................2241.2550500000000
.............................................................................................................................TGGACACCTACTCCGTCTGCTC........................................................................................2241.2550410000000
..........................................................................................................CATTGCTTCGCAGTG-GCGTG............................................................................................................2081.1390800100000
.............................................................................................................TGCTTCGCAGTG-GCGTGGAA.........................................................................................................2081.1390800100000
..................................T--AACTTAAATTAACGGA-CAAGAGT..............................................................................................................................................................................2431.0030000000300
.................................................................................................................................................TCCTTCCGCCTTCTCTCCAAGGACC.................................................................2551.0050500000000
.................................................................................................................................................................CCAAGGACCTAAGCGTTCGCATCA-CGA..............................................2711.0010100000000
...............................................................................................................................................................CTCCAAGGACCTAAGCGTTCGCAA....................................................2441.0040400000000
.....................................................................................................................................................................GGACCTAAGCGTTCGCATCA-CGATA............................................2511.0010100000000
.............................................................................................................................TGGACACCTACTCCGTCTGCTCC.......................................................................................2331.0030210000000
......................................................................................................................................................................................TCA-CGATAGAGGC--GAACTC-CGCA-GT.......................2521.0020200000000
...................................................GA-CAAGAGTACTGTTGGGACTAGGGGC............................................................................................................................................................2711.0010000000100
................................................ACGGA-CAAGAGTACTGTTGGG.....................................................................................................................................................................2131.0030000000300
.......TATAATATATACTATACAATT...............................................................................................................................................................................................................2121.0020000000200
..............................................TAACGGA-CAAGAGTACTGTTGGGACA..................................................................................................................................................................2621.0020000000200
..............................TATTT--AACTTAAATTAACGGA-CAAG.................................................................................................................................................................................2531.0030000000300
.......................................................................................................................................................................................CA-CGATAGAGGC--GAACTC-CGCA-GCCA.....................2621.0020100000100
........................................................................TAGGGGCCCCGCGGACTG.................................................................................................................................................1861.0060600000000
.......................................................................................................................................................................................CA-CGATAGAGGC--GAACTC-..............................1821.0020100000100
..........................................................................................................................................................................................................TC-CGCA-GCCGCTTCCCACCTC..........2121.0020110000000
.........................................................GAGTACTGTTGGGACTAGGGGCCCCGC.......................................................................................................................................................2711.0010000000100
.............................................TTAACGGA-CAAGAGTACTGTTGGGACT..................................................................................................................................................................2721.0020100000100
...........................................................................................................ATTGCTTCGCAGTG-GCGTGGA..........................................................................................................2181.0080800000000
.....................................AACTTAAATTAACGGA-CAAGAG...............................................................................................................................................................................2231.0030000000300
......................................................................................................................................................................................TCA-CGATAGAGGC--GAACTC-CGCA-GCA......................2621.0020000000200
...............................................................................................................................................................CTCCAAGGACCTAAGCGTTCGCATT...................................................2541.0040400000000
...........................................................................................................................................................TTCTCTCCAAGGACCTAAGCGTTCGC......................................................2641.0040400000000
......................................................CAAGAGTACTGTTGGGACTAGGG..............................................................................................................................................................2321.0020100000100
.....................................................................................................................................................................................ATCA-CGATAGAGGC--GAACTC-CGCA-.........................2421.0020000000200
.............................................................................................................................................................CTCTCCAAGGACCTAAGCGTTCGCA.....................................................2541.0040400000000
......................................................................................................................................................................................................GAACTC-CGCA-GCCGCTTCCCACCTCT.........2621.0020200000000
..............................................................................................................................................................................................AGAGGC--GAACTC-CGCA-GCCGC....................2141.0040400000000
........................................TTAAATTAACGGA-CAAGAGTACTGT.........................................................................................................................................................................2531.0030100000200
......................................................................................................................................................................GACCTAAGCGTTCGCATCA-CGATA............................................2411.0010100000000
......................................................................................................................................................................................TCA-CGATAGAGGC--GAACTC-C.............................2021.0020100000100
................................................................................................................................................................TCCAAGGACCTAAGCGTTCGCATCA-C................................................2641.0040400000000
..............................................TAACGGA-CAAGAGTACTGTTGGGAAA..................................................................................................................................................................2631.0030300000000
........................................................................TAGGGGCCCCGCGGACTGCGGT.............................................................................................................................................2261.0060200000400
........................................................AGAGTACTGTTGGGACTAGGGGC............................................................................................................................................................2311.0010000000100
................................................................................................................................................................TCCAAGGACCTAAGCGTTCGC......................................................2141.0040400000000
.......................................................AAGAGTACTGTTGGGACTAGG...............................................................................................................................................................2121.0020100000100
droKik1
TACACTTAACAA----TACTATACAACTTAGACATTAG----ACATTAACGAGGCAA-----------------AGC-GCCCGCATTTTGCGGTACGGCCGCAAAGCAATGCTTCGCACAATGGAAGGCCACTCTGTCAGTCTGCTCATTCCTCCTTCTTTCCAGCGACCTGAGGGATTTCATCA-GCTTAGCCGA--GAATTC-CGCC-ACCGCGTCCTACGTCCTTTGGTCCGSizeHit CountTotal NormTotal
No Reads
droFic1
TTG-AATTGCAATCTAAACAAGAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droSim2
TTG-TTCAATTATATATATAAATGTATATATAATT--AGCTTAATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads

Generated: 05/15/2015 at 02:32 PM