dpe-mir-iab-4

utr3 [utr3_plus_6122]; pre_miRNA [Dper\mir-iab-4-RM]; Antisense to utr3 [utr3_minus_7917]; miRNA [Dper\miR-iab-4-3p-RB]; miRNA [Dper\miR-iab-4-5p-RA]

TGCATTCGTAATTTTCTTTCAGCGGTTATGTAGGATGAACCTGTGCGACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCAACGCGGGATATGTCGAACTGAATTTAAACGTGTAAAC ***************************************.(((...((((((.(((((((((((((.((((((.((..........)).)).)))).)))))))))))))..))))))...)))...*************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M042 female body	M021 embryo	V042 embryo	V050 head	V057 head	V111 male body
........................................................ACGTATACTGAATGTATCCTGA..........................................................................................	22	0	1	266.00	266	128	91	46	0	1	0
........................................................ACGTATACTGAATGTATCCTG...........................................................................................	21	0	1	115.00	115	91	18	5	1	0	0
.........................................................CGTATACTGAATGTATCCTGA..........................................................................................	21	0	1	10.00	10	8	2	0	0	0	0
........................................................ACGTATACTGAATGTATCCTGG..........................................................................................	22	1	1	9.00	9	1	8	0	0	0	0
.........................................................CGTATACTGAATGTATCCTG...........................................................................................	20	0	1	8.00	8	8	0	0	0	0	0
........................................................ACGTATACTGAATGTATCC.............................................................................................	19	0	1	6.00	6	0	5	1	0	0	0
.........................................................CGTATACTGAATGTATCCTGAT.........................................................................................	22	1	1	5.00	5	0	5	0	0	0	0
........................................................ACGTATACTGAATGTATCCT............................................................................................	20	0	1	5.00	5	3	0	2	0	0	0
........................................................ACGTATACTGAATTTATCCTGA..........................................................................................	22	1	1	4.00	4	1	3	0	0	0	0
........................................................ACGTATACAGAATGTATCCTG...........................................................................................	21	1	1	4.00	4	4	0	0	0	0	0
........................................................ACGTATACGGAATGTATCCTGA..........................................................................................	22	1	1	4.00	4	4	0	0	0	0	0
........................................................ACGTATACTGAATGTATCCTGT..........................................................................................	22	1	1	3.00	3	1	2	0	0	0	0
........................................................ACGTATACCGAATGTATCCTG...........................................................................................	21	1	1	2.00	2	2	0	0	0	0	0
........................................................ACGTATACTGAATGTATC..............................................................................................	18	0	1	2.00	2	1	1	0	0	0	0
........................................................ACGTATACTGAATCTATCCTGA..........................................................................................	22	1	1	2.00	2	0	2	0	0	0	0
........................................................ACGTATACTGAATGTATCCCGA..........................................................................................	22	1	1	2.00	2	0	2	0	0	0	0
........................................................ACGTATACAGAATGTATCCTGA..........................................................................................	22	1	1	2.00	2	2	0	0	0	0	0
.............................................................................................TATACCTTCAGTATACGTAAC......................................................	21	0	1	2.00	2	2	0	0	0	0	0
........................................................ACGTATACTGAATGTATCCTGAA.........................................................................................	23	1	1	2.00	2	0	1	1	0	0	0
.........................................................CGTATACTGAATGTATCCTGG..........................................................................................	21	1	1	2.00	2	0	2	0	0	0	0
........................................................ACGTATACCGAATGTATCCTGA..........................................................................................	22	1	1	2.00	2	2	0	0	0	0	0
........................................................ACGTATACGGAATGTATCCTG...........................................................................................	21	1	1	2.00	2	2	0	0	0	0	0
........................................................ACGTATACTCAATTGATCCTGA..........................................................................................	22	3	1	1.00	1	0	0	1	0	0	0
........................................................ACGAATACTGAATGTATCCTTA..........................................................................................	22	2	1	1.00	1	0	0	1	0	0	0
..........................................................GTATACTGAATGTATCCTGAT.........................................................................................	21	1	1	1.00	1	1	0	0	0	0	0
.........................................................CGTATACTAAATGTATCCTGA..........................................................................................	21	1	1	1.00	1	1	0	0	0	0	0
..........................................................................................CGGTATACCTTCAGTATACG..........................................................	20	0	1	1.00	1	1	0	0	0	0	0
........................................................ACGTATACTGAAAGTATCCTGA..........................................................................................	22	1	1	1.00	1	0	1	0	0	0	0
........................................................ACGTATACTGAATGTATCCTCA..........................................................................................	22	1	1	1.00	1	0	0	1	0	0	0
............................................................ATACTGAATGTATCCTGA..........................................................................................	18	0	1	1.00	1	1	0	0	0	0	0
.............................................................................................TATACCTTCAGTATACGTAACA.....................................................	22	0	1	1.00	1	1	0	0	0	0	0
.......................................................TACGTATACTGAATGTATCCTG...........................................................................................	22	0	1	1.00	1	0	1	0	0	0	0
........................................................ACGTATACTGAATCTATCCTG...........................................................................................	21	1	1	1.00	1	1	0	0	0	0	0
..........................................................GTATACTGAATGTATCCTT...........................................................................................	19	1	1	1.00	1	1	0	0	0	0	0
........................................................ACGTATACTGAAGGTATCCTGA..........................................................................................	22	1	1	1.00	1	0	1	0	0	0	0
.........................................................CGTATACTGAATGTATCCTGAG.........................................................................................	22	0	1	1.00	1	1	0	0	0	0	0
........................................................ACGTATACAGAATGTATCCT............................................................................................	20	1	1	1.00	1	1	0	0	0	0	0
........................................................ACGTATACTGACTGTATCCTGA..........................................................................................	22	1	1	1.00	1	0	0	1	0	0	0
........................................................ACGTATAATGAATGTATCCTCA..........................................................................................	22	2	1	1.00	1	0	0	1	0	0	0
........................................................ACGTATGCTGAATGTATCCTGA..........................................................................................	22	1	1	1.00	1	0	0	1	0	0	0
.............................................................................................TATACCTTCAGTATACGTAACT.....................................................	22	1	1	1.00	1	1	0	0	0	0	0
.......................................................CACGTATACTGAATGTATCCTG...........................................................................................	22	1	1	1.00	1	1	0	0	0	0	0
........................................................ACGTACACTGAATGTATCCTGA..........................................................................................	22	1	1	1.00	1	0	1	0	0	0	0
..........................................................GTATACTGAATGTATCCTGA..........................................................................................	20	0	1	1.00	1	1	0	0	0	0	0
..............................................................................................ATACCTTCAGTATACGTAAC......................................................	20	0	1	1.00	1	0	0	1	0	0	0
........................................................ACGTATACTGACTGTATCC.............................................................................................	19	1	1	1.00	1	0	0	1	0	0	0
........................................................ACGTATACTGAATGAATCCTG...........................................................................................	21	1	1	1.00	1	1	0	0	0	0	0
........................................................ACGTATACTGAATTTATCCTGG..........................................................................................	22	2	1	1.00	1	0	1	0	0	0	0
........................................................ACGTATACTGAATGTATCCTGAG.........................................................................................	23	0	1	1.00	1	1	0	0	0	0	0
........................................................ACGTATACTGCATGTATCCTGT..........................................................................................	22	2	1	1.00	1	0	0	1	0	0	0
........................................................ACGTATACTGTATGTATCCT............................................................................................	20	1	1	1.00	1	1	0	0	0	0	0
.........................................................CGTATACTGAATGTATCCTGAC.........................................................................................	22	1	1	1.00	1	1	0	0	0	0	0
........................................................ACATATACTGAATGTATCCTGA..........................................................................................	22	1	1	1.00	1	0	0	0	1	0	0
........................................................ACGTATACTTAATTTATCCTGA..........................................................................................	22	2	1	1.00	1	0	0	1	0	0	0
......................................................ATACGTATACTGAAGGTAT...............................................................................................	19	1	3	0.33	1	0	0	0	0	0	1
........................................................ACGTATACTCAATTTTTCCTG...........................................................................................	21	3	5	0.20	1	0	0	1	0	0	0
.......................GGCTATGCGGGATGAACC...............................................................................................................................	18	3	20	0.20	4	2	0	0	0	0	2
......................................................GTACGGTTACTGAATGTAT...............................................................................................	19	3	16	0.06	1	0	0	0	0	0	1

ACGTAAGCATTAAAAGAAAGTCGCCAATACATCCTACTTGGACACGCTGAAGCATATGCATATGACTTACATAGGACTCACATAGGATAGGCCATATGGAAGTCATATGCATTGTGCTCCTTTGTGGTCGTTGCGCCCTATACAGCTTGACTTAAATTTGCACATTTG *************************************.(((...((((((.(((((((((((((.((((((.((..........)).)).)))).)))))))))))))..))))))...)))...***************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V111 male body	M042 female body	V042 embryo	V050 head	M021 embryo	V057 head
..............................................................................................TATGGAAGTCATATGCATT.......................................................	19	0	1	543.00	543	505	25	5	6	0	2
.............................................................................................ATATGGAAGTCATATGCATT.......................................................	20	0	1	64.00	64	28	15	19	1	0	1
............................................................................................CATATGGAAGTCATATGCATT.......................................................	21	0	1	46.00	46	4	39	3	0	0	0
...........................................................................................CCATATGGAAGTCATATGCATT.......................................................	22	0	1	24.00	24	1	19	2	0	2	0
.........................................................................................GGCCATATGGAAGTCATATGCATT.......................................................	24	0	1	11.00	11	2	8	1	0	0	0
.............................................................................................TTATGGAAGTCATATGCATT.......................................................	20	1	1	10.00	10	9	1	0	0	0	0
.............................................................................................TTTTGGAAGTCATATGCATT.......................................................	20	2	1	5.00	5	5	0	0	0	0	0
..............................................................................................TAGGGAAGTCATATGCATT.......................................................	19	1	1	4.00	4	3	0	0	1	0	0
.............................................................................................ATTTGGAAGTCATATGCATT.......................................................	20	1	1	3.00	3	3	0	0	0	0	0
..............................................................................................TAAGGAAGTCATATGCATT.......................................................	19	1	1	3.00	3	3	0	0	0	0	0
.........................................................................................GGCCATATGGAAGTCATATGCAT........................................................	23	0	1	2.00	2	0	2	0	0	0	0
.........................................................................................TGCCATATGGAAGTCATATGCATT.......................................................	24	1	1	2.00	2	2	0	0	0	0	0
...........................................................................................CCATATGGAAGTCATATGCAT........................................................	21	0	1	2.00	2	0	2	0	0	0	0
..............................................................................................ATTGGAAGTCATATGCATT.......................................................	19	2	1	2.00	2	2	0	0	0	0	0
...........................................................................................TCATATGGAAGTCATATGCATT.......................................................	22	1	1	1.00	1	1	0	0	0	0	0
..........................................................................................GCCATATGGAAGTCATATGCAT........................................................	22	0	1	1.00	1	0	1	0	0	0	0
............................................................................................CATATGGAAGTCATATGCAT........................................................	20	0	1	1.00	1	0	1	0	0	0	0
..............................................................................................TACGGAAGTCATATGCATT.......................................................	19	1	1	1.00	1	1	0	0	0	0	0
............................................................................................AATATGGAAGTCATATGCATT.......................................................	21	1	1	1.00	1	1	0	0	0	0	0
............................................................................................CATATGGAAGTCGTATGCATT.......................................................	21	1	1	1.00	1	0	1	0	0	0	0
..............................................................................................TATGGAAGTGATATGCATT.......................................................	19	1	1	1.00	1	1	0	0	0	0	0
..............................................................................................TATGGAAGTCATAAGCATT.......................................................	19	1	1	1.00	1	1	0	0	0	0	0
.........................................................................................GGCCATATGGAAGTCATATGC..........................................................	21	0	1	1.00	1	0	1	0	0	0	0
..............................................................................................TATGGAAGTCATATGGATT.......................................................	19	1	1	1.00	1	1	0	0	0	0	0
..............................................................................................TATGGAAGTCAGATGCATTT......................................................	20	2	1	1.00	1	0	1	0	0	0	0
............................................................................................................................TGGTCGTTGCGACCTACACATC......................	22	3	1	1.00	1	0	0	0	0	0	1
.............................................................................................ATATGGAGGTCATATGCATT.......................................................	20	1	1	1.00	1	1	0	0	0	0	0
..............................................................................................TATGGAAGTCATATGCATG.......................................................	19	1	1	1.00	1	1	0	0	0	0	0
..............................................................................................TATGGAAGTCACATGCATT.......................................................	19	1	1	1.00	1	1	0	0	0	0	0
..............................................................................................TATGGCAGTCATATGCATT.......................................................	19	1	1	1.00	1	1	0	0	0	0	0
........................................................................................TGGCCATATGGAAGTCATATGCATT.......................................................	25	1	1	1.00	1	1	0	0	0	0	0
.....................................................ATATGCATATGACTTACATAGG.............................................................................................	22	0	1	1.00	1	0	1	0	0	0	0
........................................................TGCATATGACTTACATAGGA............................................................................................	20	0	1	1.00	1	1	0	0	0	0	0
..............................................................................................TTTGGAAGTCATATGCATT.......................................................	19	1	1	1.00	1	1	0	0	0	0	0
.............................................................................................ATATGGAAGTCATATGCAT........................................................	19	0	1	1.00	1	0	1	0	0	0	0
.........................................................................................GGCCATATGGAAGTCATATGTATT.......................................................	24	1	1	1.00	1	0	0	1	0	0	0
........................................................................................AGGCCATATGGAAGTCATATGCAT........................................................	24	0	1	1.00	1	0	1	0	0	0	0
..............................................................................................AATGGAAGTCATATGCATT.......................................................	19	1	1	1.00	1	1	0	0	0	0	0
.................................................................................................................GTGCTCCTTTGAGGTCGTTGCGCCCTA............................	27	1	1	1.00	1	0	0	0	0	1	0
............................................................................................TTTTTGGAAGTCATATGCATT.......................................................	21	3	3	1.00	3	3	0	0	0	0	0
..............................................................................................TATGGAAGTCATACGCATT.......................................................	19	1	1	1.00	1	1	0	0	0	0	0
...........................................................................................CCATAGGGAAGTCATATGCATT.......................................................	22	1	1	1.00	1	0	1	0	0	0	0
.................................................................................................................GTGCTCCTTTGTGGTCGTTGCGCCCTA............................	27	0	1	1.00	1	0	0	0	0	1	0
..............................................................................................TATGGAAGTCAGATGCATTG......................................................	20	1	1	1.00	1	0	1	0	0	0	0
............................................................................................TATATGGAAGTCATATGCATT.......................................................	21	1	1	1.00	1	0	0	1	0	0	0
.............................................................................................ATATGAAAGTCATATGCATT.......................................................	20	1	1	1.00	1	0	0	1	0	0	0
..............................................................................................TATGGAAGTCATATGCAT........................................................	18	0	1	1.00	1	0	1	0	0	0	0
.............................................................................................ATAGGGAAGTCATATGCATT.......................................................	20	1	1	1.00	1	0	0	1	0	0	0
..............................................................................................TAGGGAAGTCATATGCAT........................................................	18	1	1	1.00	1	1	0	0	0	0	0
...........................................................................................CCATATGGAAGTCGTATGCATT.......................................................	22	1	1	1.00	1	0	1	0	0	0	0
..........................................................................................GCCATATGGAAGTCATATGCATT.......................................................	23	0	1	1.00	1	0	1	0	0	0	0
..............................................................................................TATGGATGCCATATGCATT.......................................................	19	2	2	0.50	1	0	0	1	0	0	0
..............................................................................................TATGGAAGTCATATGCATA.......................................................	19	1	3	0.33	1	1	0	0	0	0	0
..........TCTACGAAAGTCGCCAATA...........................................................................................................................................	19	3	20	0.10	2	0	2	0	0	0	0

Species	Coordinate	ID	Type	Alignment
droPer2	scaffold_0:11526523-11526690 +	dpe-mir-iab-4	Known_mirbase	TGCA-TTCGTAATTTT------------------------------------------------CTT-TCA-GCGGTTATG---T-----AGGATGAACCTGTGCGACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCAACGCGGGATATGTC-----------GAACTG--AATT------TAAACGT-----GTAAAC
dp5	2:17671717-17671871 +	dps-mir-iab-4	Known_mirbase	TGCA-CTCGTAATTTT------------------------------------------------CTT-TCA-GCGGTTATG---T-----AGGATGAACCTGTGCGACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCAACGCGGGATACGTC-----GAACTGAAAC--------------------------------
droWil2	scf2_1100000004943:4905569-4905722 -	dwi-mir-iab-4	Known_mirbase	TACA-TACGAAACGGTCACCGGGT-----------ACCG-------------------------------G-TCACTTTCC----------AGATGAATCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATGCTATCCGGTATACCTTCAGTATACGTAACACGATGAAACACCAACAACGCGGGATGTGTG-----------AAAC--------------------------------
droVir3	scaffold_12855:414680-414799 -	dvi-mir-iab-4	Known_mirbase	------------------------------------------------------------------------GCACTTA-----------TTGTAGAGCCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCGACGCGGGATGTG-------------T-----------------------------------
droMoj3	scaffold_6540:1943691-1943841 +	dmo-mir-iab-4	Known_mirbase	GGCGATTCGAGATTTT-A------CACTTTTCAGGAG------------------------------------------CG---AAT----TGTTGAGCCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCAACGCGGGATGTGTG-----------AAA---------------------------------
droGri2	scaffold_14906:12815092-12815246 +	dgr-mir-iab-4	Known_mirbase	GG----------------------------------------------------------------------ACACTCTTG---TA---------GAACCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCAACGCGGGATGTGTTTTGTA------TAT-ATATA--AATTTCG-----ATAAATAATACAC
droAna3	scaffold_13340:7215147-7215313 -	dan-mir-iab-4	Known_mirbase	TGCA-GC----------------------------ACT-------------------------------A-GAACATTACG---GAGG--ATGGTGATTTTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGTAACACCTTCAACGCGGGACGTG-------------AAA-ACTTA--ATATTCTGAA--ATATTTAAAACAC
droBip1	scf7180000396708:1638829-1639005 +			TGCA-GC----------------------------ACTACT--------------------ATCTTACCA-GAAAATTACG---ATGG--ATGGTGATTTTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACTTTCAACGCGGGACGTG-------------AAA-ACTTT--GT-TT--TAGAAATATTTCAAACAC
droKik1	scf7180000302313:151142-151305 +			TTCG-----------------------------------TG--------------------TCCTTTATAA-GCACTTGCG---GATG--ATGATGACTCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACAAGCAACGCGGGATGTG-------------AAACACTTG--A------AAAAAATATAT-----GA
droFic1	scf7180000452523:122330-122491 +			A-CG---------------------------------------------------------T--CTT-TCAGTCACTTTCGCCGGATTTCATAGTGATTGTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGCGGGATGTG-------------AAACACTTT--TC-CT--TAA----------AACAC
droEle1	scf7180000486474:1729414-1729575 +			TGCA-T---------------------------------------------------------------CG-TCACTTTCG---GATT--ATGGTGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGCGGGATGTG-------------AAACACTTT--AC-TT--TAAAAATATAT-GTAATT
droRho1	scf7180000759657:23974-24127 +			-------------------------------------------------------------------------CACTTTCG---GATT--ATGGTGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGCGGGATGTG-------------AAACACTTT--AC-TG-TTAAAACT--GTTGAATAC
droBia1	scf7180000299102:622740-622906 +			TGCA-GC----------------------------GGCGCA--------------------TCTTTC-TCG-GCACTTTTG---GATT--ATGGTGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGCGGGATGTG-------------AAACACTTT--AT-TTT-TG-----------AAAAC
droTak1	scf7180000411269:86538-86715 +			TGCA-GC----------------------------GGCGCA--------------------TCCTTCTTTG-GCACTTTTG---GATT--ATGGTGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGTGGGATGTG-------------AAACACTTT--TC-TTTTTAAAACT--CGACGAAAC
droEug1	scf7180000409804:92891-93034 +			-------------------------------------------------------------------------CACTTTCG---GATT--ATAGTGATTGTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGTGGGATGTG-------------AAACAGTTT--AC-TT--TAA-----------AAAC
dm3	chr3R:12681950-12682102 +	dme-mir-iab-4	Known_mirbase	GACG-----------------------------------CA--------------------TAATTT-TCA-GCACTTTTG---AATA--ATGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGAGAGCACTAACAACGTGGGATGTG-------------AAACACTTT--T------TAA---------------
droSim2	3r:8574078-8574227 -	dsi-mir-iab-4	Known_mirbase	GGCA---------------------------------------------------------TAATTT-TCA-GCACTTTTG---GATA--ATGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGATAGCACGAGCAACGTGGGATGTG-------------AAACACTTT--T-------AA---------------
droSec2	scaffold_12:1472206-1472383 -	dse-mir-iab-4	Known_mirbase	TTTA-TC----------------------------TGC--ATCTAGATCCGCGACACGGCATAATTT-TCA-GCACTTTTG---GATA--ATGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGATAGCACGAGCAACGTGGGATGTG-------------AAACACTTT--T------TAA--------------T
droYak3	3R:11708915-11709082 -	dya-mir-iab-4	Known_mirbase	GACG-----------------------------------CG--------------------TAATTT-TCA-GCACTTTTG---GACT--AAGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGAAAGCACGAGCAACGTGGGATGTG-------------AAACACTTT--T------TAATACTGCTTAATACAC
droEre2	scaffold_4770:8952369-8952531 -	der-mir-iab-4	Known_mirbase	GACG-----------------------------------TA--------------------TAATTT-TCA-GCACTTTTG---GATT--AAGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGAAAGCACGAGCAACGTGGGATGTG-------------AAACACTTT--T------TAAGACT--C---TACAA

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droPer2

TGCA-TTCGTAATTTT------------------------------------------------CTT-TCA-GCGGTTATG---T-----AGGATGAACCTGTGCGACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCAACGCGGGATATGTC-----------GAACTG--AATT------TAAACGT-----GTAAAC	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
...................................................................................................................ACGTATACTGAATGTATCCTGA..................................................................................................................	22	1	266.00	266	91	128	46	0	1	0
...................................................................................................................ACGTATACTGAATGTATCCTG...................................................................................................................	21	1	115.00	115	18	91	5	1	0	0
....................................................................................................................CGTATACTGAATGTATCCTGA..................................................................................................................	21	1	10.00	10	2	8	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGG..................................................................................................................	22	1	9.00	9	8	1	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTG...................................................................................................................	20	1	8.00	8	0	8	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCC.....................................................................................................................	19	1	6.00	6	5	0	1	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGAT.................................................................................................................	22	1	5.00	5	5	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCT....................................................................................................................	20	1	5.00	5	0	3	2	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGT..................................................................................................................	22	1	3.00	3	2	1	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATC......................................................................................................................	18	1	2.00	2	1	1	0	0	0	0
........................................................................................................................................................TATACCTTCAGTATACGTAAC..............................................................................	21	1	2.00	2	0	2	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAA.................................................................................................................	23	1	2.00	2	1	0	1	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGG..................................................................................................................	21	1	2.00	2	2	0	0	0	0	0
.....................................................................................................................GTATACTGAATGTATCCTGAT.................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACG..................................................................................	20	1	1.00	1	0	1	0	0	0	0
.......................................................................................................................ATACTGAATGTATCCTGA..................................................................................................................	18	1	1.00	1	0	1	0	0	0	0
........................................................................................................................................................TATACCTTCAGTATACGTAACA.............................................................................	22	1	1.00	1	0	1	0	0	0	0
..................................................................................................................TACGTATACTGAATGTATCCTG...................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................GTATACTGAATGTATCCTT...................................................................................................................	19	1	1.00	1	0	1	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGAG.................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
........................................................................................................................................................TATACCTTCAGTATACGTAACT.............................................................................	22	1	1.00	1	0	1	0	0	0	0
.....................................................................................................................GTATACTGAATGTATCCTGA..................................................................................................................	20	1	1.00	1	0	1	0	0	0	0
.........................................................................................................................................................ATACCTTCAGTATACGTAAC..............................................................................	20	1	1.00	1	0	0	1	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAG.................................................................................................................	23	1	1.00	1	0	1	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGAC.................................................................................................................	22	1	1.00	1	0	1	0	0	0	0

dp5

TGCA-CTCGTAATTTT------------------------------------------------CTT-TCA-GCGGTTATG---T-----AGGATGAACCTGTGCGACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCAACGCGGGATACGTC-----GAACTGAAAC--------------------------------	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
...................................................................................................................ACGTATACTGAATGTATCCTGA..................................................................................................................	22	1	2365.00	2365	1	931	675	3	250	5	0	29	199	272
...................................................................................................................ACGTATACTGAATGTATCCTG...................................................................................................................	21	1	718.00	718	1	650	37	0	14	1	1	1	5	8
....................................................................................................................CGTATACTGAATGTATCCTGA..................................................................................................................	21	1	90.00	90	0	81	5	0	3	0	0	0	1	0
...................................................................................................................ACGTATACTGAATGTATCC.....................................................................................................................	19	1	89.00	89	0	1	86	1	1	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTG...................................................................................................................	20	1	60.00	60	0	60	0	0	0	0	0	0	0	0
........................................................................................................................................................TATACCTTCAGTATACGTAAC..............................................................................	21	1	36.00	36	0	3	31	1	1	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCT....................................................................................................................	20	1	33.00	33	0	21	4	0	8	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTAAC..............................................................................	24	1	31.00	31	0	2	27	1	1	0	0	0	0	0
........................................................................................................................................................TATACCTTCAGTATACGTAACA.............................................................................	22	1	21.00	21	0	5	11	0	5	0	0	0	0	0
........................................................................................................................................................TATACCTTCAGTATACGTAACT.............................................................................	22	1	19.00	19	0	4	15	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAA.................................................................................................................	23	1	18.00	18	0	1	3	0	1	0	0	4	8	1
...................................................................................................................ACGTATACTGAATGTATCCTGT..................................................................................................................	22	1	15.00	15	0	7	0	0	5	0	0	0	3	0
...................................................................................................................ACGTATACTGAATGTATC......................................................................................................................	18	1	12.00	12	0	0	10	0	2	0	0	0	0	0
........................................................................................................................................................TATACCTTCAGTATACGTAACC.............................................................................	22	1	9.00	9	0	1	8	0	0	0	0	0	0	0
.....................................................................................................................GTATACTGAATGTATCCTG...................................................................................................................	19	1	9.00	9	0	9	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAT.................................................................................................................	23	1	8.00	8	0	1	1	0	1	0	0	2	3	0
....................................................................................................................CGTATACTGAATGTATCCTGAT.................................................................................................................	22	1	7.00	7	0	1	1	0	5	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGG..................................................................................................................	22	1	6.00	6	0	1	2	0	3	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACG..................................................................................	20	1	5.00	5	0	4	0	0	1	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGC..................................................................................................................	22	1	5.00	5	0	2	3	0	0	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGT.................................................................................	21	1	4.00	4	0	2	1	0	0	0	1	0	0	0
.....................................................................................................................GTATACTGAATGTATCCTGA..................................................................................................................	20	1	4.00	4	0	4	0	0	0	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTA................................................................................	22	1	4.00	4	0	4	0	0	0	0	0	0	0	0
.........................................................................................................................................................ATACCTTCAGTATACGTAAC..............................................................................	20	1	3.00	3	0	1	2	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGAA.................................................................................................................	22	1	3.00	3	0	1	0	0	2	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGAC.................................................................................................................	22	1	3.00	3	0	2	1	0	0	0	0	0	0	0
......................................................................................................................TATACTGAATGTATCCTG...................................................................................................................	18	1	2.00	2	0	1	0	0	0	0	0	0	0	1
.....................................................................................................................................................CGGTATACCTTCAGTATACGTAACT.............................................................................	25	1	2.00	2	0	0	2	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCC....................................................................................................................	20	1	2.00	2	0	0	2	0	0	0	0	0	0	0
......................................................................................................................TATACTGAATGTATCCTGA..................................................................................................................	19	1	2.00	2	0	1	0	0	1	0	0	0	0	0
........................................................................................................................................................TATACCTTCAGTATACGTAACAC............................................................................	23	1	2.00	2	0	0	2	0	0	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTAA...............................................................................	23	1	2.00	2	0	0	0	0	1	0	0	0	1	0
......................................................................................................................................................GGTATACCTTCAGTATAC...................................................................................	18	1	2.00	2	0	2	0	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCT....................................................................................................................	19	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.....................................................................................................................GTATACTGAATGTATCCTGAC.................................................................................................................	21	1	2.00	2	0	0	2	0	0	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATAC...................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................ATACCTTCAGTATACGTAACA.............................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGTT.................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCG....................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCC....................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0
.....................................................................................................................GTATACTGAATGTATCCTGAA.................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0
..................................................................................................................TACGTATACTGAATGTATCCTG...................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................TATACCTTCAGTATACGTAAGC.............................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0
..........................................................................................................................................................TACCTTCAGTATACGTAACACGA..........................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGAGA................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................TATACCTTCAGTATACGTAA...............................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................GGTATACCTTCAGTATACGTAAC..............................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAC.................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCC.....................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGACA................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	1
...................................................................................................................ACGTATACTGAATGTATCCTGGT.................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................GTATACTGAATGTATCCTGAAC................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	1
...................................................................................................................ACGTATACTGAATGTATCCTGAG.................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGAG.................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGACC................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGATA................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGC.................................................................................	21	1	1.00	1	0	0	0	1	0	0	0	0	0	0
......................................................................................................................TATACTGAATGTATCCTGAAA................................................................................................................	21	3	0.67	2	0	0	1	0	0	0	0	0	1	0
...................................................................................................................ACGTATACTGAATGTATCCTAT..................................................................................................................	22	2	0.50	1	0	0	1	0	0	0	0	0	0	0

droWil2

TACA-TACGAAACGGTCACCGGGT-----------ACCG-------------------------------G-TCACTTTCC----------AGATGAATCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATGCTATCCGGTATACCTTCAGTATACGTAACACGATGAAACACCAACAACGCGGGATGTGTG-----------AAAC--------------------------------	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
...................................................................................................................ACGTATACTGAATGTATCCTGA..................................................................................................................	22	1	693.00	693	1	358	0	333	1
...................................................................................................................ACGTATACTGAATGTATCCTG...................................................................................................................	21	1	361.00	361	2	312	0	47	0
....................................................................................................................CGTATACTGAATGTATCCTGA..................................................................................................................	21	1	42.00	42	0	36	1	5	0
...................................................................................................................ACGTATACTGAATGTATCCT....................................................................................................................	20	1	35.00	35	0	20	0	14	1
....................................................................................................................CGTATACTGAATGTATCCTG...................................................................................................................	20	1	26.00	26	0	26	0	0	0
........................................................................................................................................................TATACCTTCAGTATACGTAACA.............................................................................	22	1	18.00	18	0	3	0	15	0
...................................................................................................................ACGTATACTGAATGTATCCTGT..................................................................................................................	22	1	9.00	9	0	4	0	5	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGT.................................................................................	21	1	6.00	6	0	0	0	6	0
.....................................................................................................................GTATACTGAATGTATCCTGA..................................................................................................................	20	1	4.00	4	1	2	0	1	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTA................................................................................	22	1	3.00	3	0	2	0	1	0
...................................................................................................................ACGTATACTGAATGTATCCTGAG.................................................................................................................	23	1	3.00	3	0	1	0	2	0
........................................................................................................................................................TATACCTTCAGTATACGTAACT.............................................................................	22	1	3.00	3	0	0	0	3	0
...................................................................................................................ACGTATACTGAATGTATCCTGG..................................................................................................................	22	1	3.00	3	0	3	0	0	0
..................................................................................................................TACGTATACTGAATGTATCCT....................................................................................................................	21	1	2.00	2	0	0	0	2	0
....................................................................................................................CGTATACTGAATGTATCCTGAA.................................................................................................................	22	1	2.00	2	0	1	0	1	0
....................................................................................................................CGTATACTGAATGTATCCT....................................................................................................................	19	1	2.00	2	0	2	0	0	0
........................................................................................................................................................TATACCTTCAGTATACGTAAC..............................................................................	21	1	2.00	2	0	0	0	2	0
.....................................................................................................................................................CGGTATACCTTCAGTATACG..................................................................................	20	1	2.00	2	0	1	0	1	0
...................................................................................................................ACGTATACTGAATGTATCCTGAGT................................................................................................................	24	1	2.00	2	0	1	0	1	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTAA...............................................................................	23	1	2.00	2	0	0	0	2	0
......................................................................................................................TATACTGAATGTATCCTGAGTG...............................................................................................................	22	1	2.00	2	0	0	0	2	0
...................................................................................................................ACGTATACTGAATGTATCCTGAGTGT..............................................................................................................	26	1	2.00	2	0	0	0	2	0
...................................................................................................................ACGTATACTGAATGTATCC.....................................................................................................................	19	1	2.00	2	0	1	0	1	0
.....................................................................................................................GTATACTGAATGTATCCTGATA................................................................................................................	22	1	1.00	1	0	1	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAA.................................................................................................................	23	1	1.00	1	0	1	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGAT.................................................................................................................	22	1	1.00	1	0	1	0	0	0
...................................................................................................................ACGTATACTGAATGTATC......................................................................................................................	18	1	1.00	1	0	0	0	1	0
................................................................................................................TATACGTATACTGAATGTATCC.....................................................................................................................	22	1	1.00	1	0	0	0	1	0
.........................................................................................................................................................ATACCTTCAGTATACGTAAC..............................................................................	20	1	1.00	1	0	1	0	0	0
......................................................................................................................TATACTGAATGTATCCTG...................................................................................................................	18	1	1.00	1	0	1	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAGTG...............................................................................................................	25	1	1.00	1	0	0	0	1	0
..................................................................................................................TACGTATACTGAATGTATC......................................................................................................................	19	1	1.00	1	0	0	0	1	0
...................................................................................................................ACGTATACTGAATGTATCCTC...................................................................................................................	21	1	1.00	1	0	0	0	1	0
...................................................................................................................ACGTATACTGAATGTATCCTT...................................................................................................................	21	1	1.00	1	0	0	0	1	0
......................................................................................................................TATACTGAATGTATCCTGAAA................................................................................................................	21	1	1.00	1	0	1	0	0	0
...........................................................................................AGATGAATCTGTGCAACTTCGT..........................................................................................................................................	22	1	1.00	1	0	0	0	1	0
........................................................................................................................................................TATACCTTCAGTATACGTAA...............................................................................	20	1	1.00	1	0	0	0	1	0
....................................................................................................................CGTATACTGAATGTATCC.....................................................................................................................	18	1	1.00	1	0	1	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTAAC..............................................................................	24	1	1.00	1	0	1	0	0	0

droVir3

------------------------------------------------------------------------GCACTTA-----------TTGTAGAGCCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCGACGCGGGATGTG-------------T-----------------------------------	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells	SRR2096013 Ovary_Strain_9_oxidized	SRR2096014 Ovary_Strain_160_oxidized	SRR2096026 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096038 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096050 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096055 Ovary_Min_43	SRR2096056 Ovary_Min_46	SRR2096057 Ovary_Min_50	SRR2096058 Ovary_Min_98	SRR2096059 Ovary_Min_164	SRR2096060 Ovary_Min_193	SRR2096061 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096072 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096079 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096080 embryo_0-2h from 15to16 day old nondysgenic mothers	SRR2096081 embryo_0-2h from 15to16 day old nondysgenic mothers
...................................................................................................................ACGTATACTGAATGTATCCTGA..................................................................................................................	22	1	1928.00	1928	11	3	421	270	2	6	3	1	1	0	1	0	0	0	31	15	8	17	9	2	0	15	30	4	31	15	50	36	136	63	36	79	5	0	4	11	8	3	1	5	0	0	0	6	3	8	10	6	14	13	28	24	13	13	9	3	7	3	43	18	0	0	0	70	97	16	4	12	9	49	10	7	34	11	16	15	16	6	2
...................................................................................................................ACGTATACTGAATGTATCCTG...................................................................................................................	21	1	816.00	816	5	1	403	14	0	2	0	0	1	0	0	0	0	0	16	12	4	16	13	7	4	8	22	1	9	5	9	6	61	26	16	54	0	6	1	1	0	1	0	4	0	0	0	0	0	2	0	2	1	0	2	1	0	7	0	0	0	1	6	1	0	0	0	1	2	0	0	1	7	20	14	0	10	7	1	0	0	1	1
...................................................................................................................ACGTATACTGAATGTATCCT....................................................................................................................	20	1	165.00	165	0	0	33	2	0	0	0	0	0	0	0	0	0	0	7	9	2	8	9	0	1	8	8	0	2	3	1	4	9	5	7	25	0	1	1	0	0	0	4	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	4	0	0	0	1	5	0	1	1	2	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGT..................................................................................................................	22	1	86.00	86	0	0	8	2	0	0	1	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	3	0	0	0	3	3	30	5	3	19	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGA..................................................................................................................	21	1	76.00	76	0	0	38	8	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0	1	0	1	0	1	0	8	1	1	4	0	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	1	1
...................................................................................................................ACGTATACTGAATGTATCC.....................................................................................................................	19	1	74.00	74	2	0	5	43	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	4	2	0	2	0	1	0	0	4	0	0	0	0	0	0	0	0	0	1	0	1	0	3	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTG...................................................................................................................	20	1	54.00	54	0	0	47	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGAT.................................................................................................................	22	1	33.00	33	1	0	3	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	3	1	0	3	1	1	0	0	0	0	2	0	0	0	0	0	1	0	0	0	0	2	0	0	0	1	1	3	0	1	0
...................................................................................................................ACGTATACTGAATGTATCCTGAGTGTATCCTATC......................................................................................................	34	1	24.00	24	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	3	2	3	0	3	0	3	3	0	0	0	1	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGT.................................................................................	21	1	24.00	24	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	3	6	0	0	1	0	0	3	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTAAC..............................................................................	24	1	22.00	22	0	0	1	7	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	5	2	0	0	0	0	0	0	1	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACG..................................................................................	20	1	22.00	22	0	0	21	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAA.................................................................................................................	23	1	21.00	21	0	0	1	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	2	0	0	0	0	4	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAT.................................................................................................................	23	1	18.00	18	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	1	0	1	1	0	0	0	0	0	0	0	1	0	2	0	0	0	1	0	2	0	2	2	0	0	0	0	0
......................................................................................................................TATACTGAATGTATCCTGAAA................................................................................................................	21	1	15.00	15	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	1	0	2	0	1	1	3	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATC......................................................................................................................	18	1	13.00	13	1	1	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	1	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTA................................................................................	22	1	12.00	12	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	1	0	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGAA.................................................................................................................	22	1	10.00	10	0	0	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................TATACCTTCAGTATACGTAACT.............................................................................	22	1	8.00	8	0	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTAACT.............................................................................	25	1	7.00	7	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................TATACCTTCAGTATACGTAACC.............................................................................	22	1	7.00	7	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGTC.................................................................................................................	23	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	3	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................TATACCTTCAGTATACGTAAC..............................................................................	21	1	6.00	6	0	0	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTT...................................................................................................................	21	1	6.00	6	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAGTGTATCCTATCC.....................................................................................................	35	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	1	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................TATACCTTCAGTATACGTAACA.............................................................................	22	1	6.00	6	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTC...................................................................................................................	21	1	5.00	5	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGAC.................................................................................................................	22	1	5.00	5	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................GTATACTGAATGTATCCTGA..................................................................................................................	20	1	4.00	4	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGG..................................................................................................................	22	1	4.00	4	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCC.....................................................................................................................	18	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0	0
.....................................................................................................................GTATACTGAATGTATCCTG...................................................................................................................	19	1	4.00	4	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTAA...............................................................................	23	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGATCT...............................................................................................................	25	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGATA................................................................................................................	23	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGAAA................................................................................................................	23	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGACA................................................................................................................	23	1	3.00	3	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGACC................................................................................................................	24	1	3.00	3	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................TATACCTTCAGTATACGTAA...............................................................................	20	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGATC................................................................................................................	24	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCT....................................................................................................................	19	1	3.00	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGATC................................................................................................................	23	1	3.00	3	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAGTGTATCCT.........................................................................................................	31	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................GGTATACCTTCAGTATACGTAAC..............................................................................	23	1	2.00	2	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAAC................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAAA................................................................................................................	24	1	2.00	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAG.................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAC.................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAGTGTATCCTATCT.....................................................................................................	35	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................TATACCTTCAGTATACGTAACG.............................................................................	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................TACCTTCAGTATACGTAAC..............................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................ACTGAATGTATCCTGA..................................................................................................................	16	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATC......................................................................................................................	17	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................GTATACTGAATGTATCCTGAAA................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................GGTATACCTTCAGTATACGTA................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGTT.................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGAG.................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................ATACCTTCAGTATACGTAAC..............................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTAT...............................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................TATACTGAATGTATCCTGA..................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................GGTATACCTTCAGTATACGT.................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGAGC................................................................................................................	23	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAGTGTATCCTATT......................................................................................................	34	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACT..................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTT................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGATA................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
.....................................................................................................................GTATACTGAATGTATCCTGAAC................................................................................................................	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATAC...................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTA...................................................................................................................	21	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGATAA...............................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTAACC.............................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................TCCGGTATACCTTCAGTATACGTAAC..............................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................ATACTGAATGTATCCTGA..................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGT..................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................TATACTGAATGTATCC.....................................................................................................................	16	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................TATACTGAATGTATCCTGAA.................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................TATACTGAATGTATCCTGAAAA...............................................................................................................	22	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
......................................................................................................................TATACTGAATGTATCCTGTT.................................................................................................................	20	2	0.50	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

GGCGATTCGAGATTTT-A------CACTTTTCAGGAG------------------------------------------CG---AAT----TGTTGAGCCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCAACGCGGGATGTGTG-----------AAA---------------------------------	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
...................................................................................................................ACGTATACTGAATGTATCCTGA..................................................................................................................	22	1	13359.00	13359	680	197	0	1	12481	0
...................................................................................................................ACGTATACTGAATGTATCCTG...................................................................................................................	21	1	937.00	937	565	22	0	0	350	0
...................................................................................................................ACGTATACTGAATGTATCC.....................................................................................................................	19	1	784.00	784	6	0	0	0	778	0
....................................................................................................................CGTATACTGAATGTATCCTGA..................................................................................................................	21	1	170.00	170	67	1	0	0	102	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTAAC..............................................................................	24	1	147.00	147	0	2	0	0	145	0
........................................................................................................................................................TATACCTTCAGTATACGTAACT.............................................................................	22	1	137.00	137	1	4	0	0	132	0
...................................................................................................................ACGTATACTGAATGTATCCT....................................................................................................................	20	1	125.00	125	40	7	0	0	78	0
....................................................................................................................CGTATACTGAATGTATCCTGAT.................................................................................................................	22	1	124.00	124	4	8	0	0	112	0
...................................................................................................................ACGTATACTGAATGTATC......................................................................................................................	18	1	108.00	108	1	0	0	0	107	0
...................................................................................................................ACGTATACTGAATGTATCCTGAA.................................................................................................................	23	1	104.00	104	2	0	0	0	102	0
........................................................................................................................................................TATACCTTCAGTATACGTAAC..............................................................................	21	1	82.00	82	0	2	0	0	80	0
...................................................................................................................ACGTATACTGAATGTATCCTGAT.................................................................................................................	23	1	81.00	81	2	3	0	0	76	0
....................................................................................................................CGTATACTGAATGTATCCTG...................................................................................................................	20	1	70.00	70	70	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAC.................................................................................................................	23	1	68.00	68	0	0	0	0	68	0
....................................................................................................................CGTATACTGAATGTATCCTGAC.................................................................................................................	22	1	67.00	67	0	2	0	0	65	0
....................................................................................................................CGTATACTGAATGTATCCTGAA.................................................................................................................	22	1	65.00	65	3	4	0	0	58	0
...................................................................................................................ACGTATACTGAATGTATCCTGC..................................................................................................................	22	1	41.00	41	1	1	0	0	39	0
........................................................................................................................................................TATACCTTCAGTATACGTAACC.............................................................................	22	1	34.00	34	0	0	0	0	34	0
........................................................................................................................................................TATACCTTCAGTATACGTAACA.............................................................................	22	1	32.00	32	5	3	0	0	24	0
...................................................................................................................ACGTATACTGAATGTATCCTGT..................................................................................................................	22	1	29.00	29	5	1	0	0	23	0
...................................................................................................................ACGTATACTGAATGTATCCC....................................................................................................................	20	1	24.00	24	0	0	0	0	24	0
.....................................................................................................................GTATACTGAATGTATCCTGA..................................................................................................................	20	1	22.00	22	5	1	0	0	16	0
...................................................................................................................ACGTATACTGAATGTATCCTGG..................................................................................................................	22	1	18.00	18	2	1	0	0	15	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTAACT.............................................................................	25	1	14.00	14	0	0	0	0	14	0
......................................................................................................................TATACTGAATGTATCCTGAAA................................................................................................................	21	1	13.00	13	0	0	0	0	13	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGT.................................................................................	21	1	11.00	11	2	3	0	0	6	0
.....................................................................................................................................................CGGTATACCTTCAGTATACG..................................................................................	20	1	11.00	11	11	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGAAA................................................................................................................	23	1	10.00	10	0	0	0	0	10	0
....................................................................................................................CGTATACTGAATGTATCCTGACC................................................................................................................	23	1	10.00	10	0	0	0	0	10	0
.....................................................................................................................GTATACTGAATGTATCCTG...................................................................................................................	19	1	9.00	9	8	0	0	0	1	0
....................................................................................................................CGTATACTGAATGTATCC.....................................................................................................................	18	1	9.00	9	1	0	0	0	8	0
.......................................................................................................................ATACTGAATGTATCCTGA..................................................................................................................	18	1	9.00	9	0	0	0	0	9	0
...................................................................................................................ACGTATACTGAATGTATCCTGATC................................................................................................................	24	1	8.00	8	0	0	0	0	8	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTA................................................................................	22	1	8.00	8	2	0	0	0	6	0
......................................................................................................................TATACTGAATGTATCCTGA..................................................................................................................	19	1	7.00	7	3	0	0	0	4	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTAACC.............................................................................	25	1	6.00	6	0	0	0	0	6	0
........................................................................................................................................................TATACCTTCAGTATACGTAACAC............................................................................	23	1	5.00	5	0	1	0	0	4	0
...................................................................................................................ACGTATACTGAATGTATCCTT...................................................................................................................	21	1	5.00	5	2	0	0	0	3	0
....................................................................................................................CGTATACTGAATGTATCCT....................................................................................................................	19	1	4.00	4	4	0	0	0	0	0
................................................................................................................TATACGTATACTGAATGTATCC.....................................................................................................................	22	1	4.00	4	1	0	0	0	3	0
.................................................................................................................ATACGTATACTGAATGTATCCT....................................................................................................................	22	1	4.00	4	0	0	0	0	4	0
......................................................................................................................................................GGTATACCTTCAGTATACGTAAC..............................................................................	23	1	4.00	4	0	0	0	0	4	0
....................................................................................................................CGTATACTGAATGTATCCTGTT.................................................................................................................	22	1	4.00	4	0	0	0	0	4	0
.........................................................................................................................................................ATACCTTCAGTATACGTAAC..............................................................................	20	1	4.00	4	0	0	0	0	4	0
...................................................................................................................ACGTATACTGAATGTATCCTGAG.................................................................................................................	23	1	4.00	4	0	0	0	0	4	0
...................................................................................................................ACGTATACTGAATGTATCCTGAAA................................................................................................................	24	1	4.00	4	0	0	0	0	4	0
.........................................................................................................................................................ATACCTTCAGTATACGTAACAC............................................................................	22	1	3.00	3	0	0	0	0	3	0
.....................................................................................................................GTATACTGAATGTATCCTGAA.................................................................................................................	21	1	3.00	3	0	0	0	0	3	0
....................................................................................................................CGTATACTGAATGTATCCTGATC................................................................................................................	23	1	3.00	3	0	0	0	0	3	0
...................................................................................................................ACGTATACTGAATGTATCCTGAGT................................................................................................................	24	1	3.00	3	0	0	0	0	3	0
.......................................................................................................................................................GTATACCTTCAGTATACGTAAC..............................................................................	22	1	3.00	3	1	0	0	0	2	0
.....................................................................................................................GTATACTGAATGTATCCTGAC.................................................................................................................	21	1	3.00	3	1	0	0	0	2	0
...................................................................................................................ACGTATACTGAATGTATCCTGATA................................................................................................................	24	1	3.00	3	0	0	0	0	3	0
...................................................................................................................ACGTATACTGAATGTATCCTGACC................................................................................................................	24	1	3.00	3	0	0	0	0	3	0
.....................................................................................................................GTATACTGAATGTATCCTGAAA................................................................................................................	22	1	3.00	3	0	0	0	0	3	0
..................................................................................................................TACGTATACTGAATGTATCCTG...................................................................................................................	22	1	3.00	3	1	1	0	0	1	0
....................................................................................................................CGTATACTGAATGTATCCTGAG.................................................................................................................	22	1	3.00	3	0	1	0	0	2	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGC.................................................................................	21	1	2.00	2	0	0	0	0	2	0
...................................................................................................................ACGTATACTGAATGTATCCTC...................................................................................................................	21	1	2.00	2	1	0	0	0	1	0
.........................................................................................................................................................ATACCTTCAGTATACGTAACT.............................................................................	21	1	2.00	2	2	0	0	0	0	0
..................................................................................................................TACGTATACTGAATGTATCCTGA..................................................................................................................	23	1	2.00	2	2	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGATA................................................................................................................	23	1	2.00	2	0	0	0	0	2	0
....................................................................................................................CGTATACTGAATGTATCCTGACA................................................................................................................	23	1	2.00	2	0	0	0	0	2	0
.........................................................................................................................................................ATACCTTCAGTATACGTAACA.............................................................................	21	1	2.00	2	1	0	0	0	1	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTAC...............................................................................	23	1	2.00	2	0	0	0	0	2	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTC................................................................................	22	1	2.00	2	1	0	0	0	1	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTAA...............................................................................	23	1	2.00	2	0	0	0	0	2	0
.....................................................................................................................GTATACTGAATGTATCCTGACC................................................................................................................	22	1	2.00	2	0	0	0	0	2	0
.....................................................................................................................GTATACTGAATGTATCCTGAAAC...............................................................................................................	23	1	1.00	1	0	0	0	0	1	0
.....................................................................................AT----TGTTGAGCCTGTGCAACTT.............................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0
......................................................................................................................................................GGTATACCTTCAGTATAC...................................................................................	18	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................TCCGGTATACCTTCAGTATACG..................................................................................	22	1	1.00	1	0	1	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAAG................................................................................................................	24	1	1.00	1	0	0	0	0	1	0
................................................................................................................................................CTATCCGGTATACCTTCAGTATACGTAAC..............................................................................	29	1	1.00	1	0	0	0	0	1	0
.....................................................................................................................GTATACTGAATGTATCCTGAGC................................................................................................................	22	1	1.00	1	0	0	0	0	1	0
.....................................................................................................................GTATACTGAATGTATCCTGAAC................................................................................................................	22	1	1.00	1	0	0	0	0	1	0
.....................................................................................................................GTATACTGAATGTATCCTGAGTT...............................................................................................................	23	1	1.00	1	0	0	0	0	1	0
.................................................................................................................ATACGTATACTGAATGTATCC.....................................................................................................................	21	1	1.00	1	0	0	0	0	1	0

droGri2

GG----------------------------------------------------------------------ACACTCTTG---TA---------GAACCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCAACGCGGGATGTGTTTTGTA------TAT-ATATA--AATTTCG-----ATAAATAATACAC	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
...................................................................................................................ACGTATACTGAATGTATCCTGA..................................................................................................................	22	1	145.00	145	145	0
...................................................................................................................ACGTATACTGAATGTATCCTG...................................................................................................................	21	1	34.00	34	34	0
....................................................................................................................CGTATACTGAATGTATCCTGA..................................................................................................................	21	1	13.00	13	13	0
....................................................................................................................CGTATACTGAATGTATCCTG...................................................................................................................	20	1	6.00	6	6	0
....................................................................................................................CGTATACTGAATGTATCCTGAT.................................................................................................................	22	1	5.00	5	5	0
...................................................................................................................ACGTATACTGAATGTATCCT....................................................................................................................	20	1	5.00	5	5	0
.....................................................................................................................................................CGGTATACCTTCAGTATACG..................................................................................	20	1	2.00	2	2	0
........................................................................................................................................................TATACCTTCAGTATACGTAACA.............................................................................	22	1	1.00	1	1	0
......................................................................................................................................................GGTATACCTTCAGTATACGTAAC..............................................................................	23	1	1.00	1	1	0
...................................................................................................................ACGTATACTGAATGTATCCTGT..................................................................................................................	22	1	1.00	1	1	0
....................................................................................................................CGTATACTGAATGTATCCT....................................................................................................................	19	1	1.00	1	1	0
...................................................................................................................ACGTATACTGAATGTATCCTGAGTGA..............................................................................................................	26	1	1.00	1	1	0
.....................................................................................................................GTATACTGAATGTATCCTGA..................................................................................................................	20	1	1.00	1	1	0
...................................................................................................................ACGTATACTGAATGTATCCTGAT.................................................................................................................	23	1	1.00	1	1	0
...................................................................................................................ACGTATACTGAATGTATCC.....................................................................................................................	19	1	1.00	1	1	0
......................................................................................................................TATACTGAATGTATCCTGAAA................................................................................................................	21	2	0.50	1	1	0

droAna3

TGCA-GC----------------------------ACT-------------------------------A-GAACATTACG---GAGG--ATGGTGATTTTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGTAACACCTTCAACGCGGGACGTG-------------AAA-ACTTA--ATATTCTGAA--ATATTTAAAACAC	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
...................................................................................................................ACGTATACTGAATGTATCCTGA..................................................................................................................	22	1	744.00	744	636	91	14	2	1	0
...................................................................................................................ACGTATACTGAATGTATCCTG...................................................................................................................	21	1	507.00	507	499	3	3	0	0	2
....................................................................................................................CGTATACTGAATGTATCCTGA..................................................................................................................	21	1	64.00	64	63	1	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTG...................................................................................................................	20	1	48.00	48	48	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCT....................................................................................................................	20	1	35.00	35	28	5	1	0	0	1
...................................................................................................................ACGTATACTGAATGTATCC.....................................................................................................................	19	1	32.00	32	3	29	0	0	0	0
........................................................................................................................................................TATACCTTCAGTATACGTAAC..............................................................................	21	1	12.00	12	0	12	0	0	0	0
........................................................................................................................................................TATACCTTCAGTATACGTAACT.............................................................................	22	1	9.00	9	0	9	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGT..................................................................................................................	22	1	7.00	7	6	0	0	1	0	0
........................................................................................................................................................TATACCTTCAGTATACGTAACC.............................................................................	22	1	5.00	5	0	5	0	0	0	0
........................................................................................................................................................TATACCTTCAGTATACGTAACA.............................................................................	22	1	5.00	5	0	4	1	0	0	0
...................................................................................................................ACGTATACTGAATGTATC......................................................................................................................	18	1	5.00	5	0	5	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAA.................................................................................................................	23	1	4.00	4	3	1	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAT.................................................................................................................	23	1	4.00	4	4	0	0	0	0	0
.....................................................................................................................GTATACTGAATGTATCCTG...................................................................................................................	19	1	4.00	4	4	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTAAC..............................................................................	24	1	3.00	3	0	3	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGG..................................................................................................................	22	1	3.00	3	3	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCT....................................................................................................................	19	1	3.00	3	3	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTA................................................................................	22	1	2.00	2	1	0	1	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGC..................................................................................................................	22	1	2.00	2	1	1	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGAC.................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAGG................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCC.....................................................................................................................	18	1	1.00	1	0	1	0	0	0	0
......................................................................................................................TATACTGAATGTATCCTGA..................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCC....................................................................................................................	20	1	1.00	1	0	1	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTA...................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGAGT................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGAG.................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAC.................................................................................................................	23	1	1.00	1	0	1	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAGT................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................ATACTGAATGTATCCTGA..................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAG.................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGAT.................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGT.................................................................................	21	1	1.00	1	0	1	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTAACT.............................................................................	25	1	1.00	1	0	1	0	0	0	0
.....................................................................................................................GTATACTGAATGTATCCTGA..................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................GTATACTGAATGTATCCTGATG................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGAA.................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGACA................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
......................................................................................................................TATACTGAATGTATCCTGAAA................................................................................................................	21	3	0.33	1	1	0	0	0	0	0

droBip1

TGCA-GC----------------------------ACTACT--------------------ATCTTACCA-GAAAATTACG---ATGG--ATGGTGATTTTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACTTTCAACGCGGGACGTG-------------AAA-ACTTT--GT-TT--TAGAAATATTTCAAACAC	Size	Hit Count	Total Norm	Total
No Reads

droKik1

TTCG-----------------------------------TG--------------------TCCTTTATAA-GCACTTGCG---GATG--ATGATGACTCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACAAGCAACGCGGGATGTG-------------AAACACTTG--A------AAAAAATATAT-----GA	Size	Hit Count	Total Norm	Total
No Reads

droFic1

A-CG---------------------------------------------------------T--CTT-TCAGTCACTTTCGCCGGATTTCATAGTGATTGTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGCGGGATGTG-------------AAACACTTT--TC-CT--TAA----------AACAC	Size	Hit Count	Total Norm	Total
No Reads

droEle1

TGCA-T---------------------------------------------------------------CG-TCACTTTCG---GATT--ATGGTGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGCGGGATGTG-------------AAACACTTT--AC-TT--TAAAAATATAT-GTAATT	Size	Hit Count	Total Norm	Total
No Reads

droRho1

-------------------------------------------------------------------------CACTTTCG---GATT--ATGGTGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGCGGGATGTG-------------AAACACTTT--AC-TG-TTAAAACT--GTTGAATAC	Size	Hit Count	Total Norm	Total
No Reads

droBia1

TGCA-GC----------------------------GGCGCA--------------------TCTTTC-TCG-GCACTTTTG---GATT--ATGGTGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGCGGGATGTG-------------AAACACTTT--AT-TTT-TG-----------AAAAC	Size	Hit Count	Total Norm	Total
No Reads

droTak1

TGCA-GC----------------------------GGCGCA--------------------TCCTTCTTTG-GCACTTTTG---GATT--ATGGTGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGTGGGATGTG-------------AAACACTTT--TC-TTTTTAAAACT--CGACGAAAC	Size	Hit Count	Total Norm	Total
No Reads

droEug1

-------------------------------------------------------------------------CACTTTCG---GATT--ATAGTGATTGTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGTGGGATGTG-------------AAACAGTTT--AC-TT--TAA-----------AAAC	Size	Hit Count	Total Norm	Total
No Reads

dm3

GACG-----------------------------------CA--------------------TAATTT-TCA-GCACTTTTG---AATA--ATGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGAGAGCACTAACAACGTGGGATGTG-------------AAACACTTT--T------TAA---------------	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
...................................................................................................................ACGTATACTGAATGTATCCTGA..................................................................................................................	22	1	15921.00	15921	0	0	0	0	3	1	2	32	93	37	2	4	2	0	0	0	0	0	0	0	1	2	0	5	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	1	4	17	1	7	0	2	2	0	6	15	3	0	0	0	0	962	1051	200	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	2	1219	193	2277	3330	91	0	1	47	33	110	5	11	65	5	36	110	86	74	66	234	48	10	1	0	2	7	11	9	8	59	727	142	0	200	0	3	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	18	20	47	7	4	0	3	6	4	10	63	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	23	26	0	16	0	0	11	43	1	6	1	24	0	49	0	0	0	0	0	0	36	2	1	1	0	0	0	0	4	0	0	7	0	0	0	0	0	3	2	0	0	0	0	0	0	0	0	0	91	339	29	27	22	54	209	1681	11	40	9	124	1	0	0	1	1	1	0	0	475	216	0	2	0	0	0	0	0	9	0	0	3	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	4	0	12	0	15	3	13	0	0	0	0	0	0	0	0	0	140	194	3	6	0	0	5	24	0	2	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	3	0	0	0	0	0	0	0	11
...................................................................................................................ACGTATACTGAATGTATCCTGAG.................................................................................................................	23	1	928.00	928	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	441	420	57	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTG...................................................................................................................	21	1	707.00	707	0	0	0	0	0	0	0	0	2	3	1	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	6	1	0	0	0	0	2	0	0	2	2	1	0	1	0	1	2	0	1	0	0	0	29	26	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	15	1	78	90	1	0	0	1	0	9	0	0	3	0	1	3	8	9	5	25	0	2	0	0	0	0	0	0	0	2	6	3	0	3	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	4	1	1	0	0	0	0	0	0	1	24	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	4	2	0	8	0	0	6	17	2	2	0	4	0	2	2	0	0	0	0	0	4	2	0	0	2	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	10	2	11	3	1	23	76	2	2	1	12	0	0	0	0	0	0	0	0	19	26	0	0	0	0	0	0	0	2	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	2	1	12	2	1	0	0	0	0	0	0	0	0	0	8	18	1	1	0	0	2	0	0	0	2	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	2	0	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTAA...............................................................................	23	1	701.00	701	0	0	0	0	0	0	1	5	6	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	188	14	116	138	33	0	0	3	5	22	1	1	6	0	1	1	3	2	14	16	0	3	0	0	0	1	3	1	1	7	51	4	1	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	11	0	0	0	1	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5
.....................................................................................................................................................CGGTATACCTTCAGTATACGTA................................................................................	22	1	578.00	578	0	0	0	0	0	0	2	3	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	129	14	44	112	10	0	0	10	3	17	0	2	15	1	8	9	4	4	9	16	4	3	0	0	2	0	1	0	1	8	41	5	0	31	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	1	4	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	30	0	1	0	7	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTAAC..............................................................................	24	1	456.00	456	0	0	0	0	0	0	0	5	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	126	33	45	105	9	0	0	0	1	4	0	0	0	0	0	0	2	1	1	2	21	1	0	0	2	0	0	1	0	1	42	1	0	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	15	0	0	0	2	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCT....................................................................................................................	20	1	209.00	209	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	1	0	1	1	0	0	0	0	1	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	18	14	0	0	0	3	0	1	0	0	1	0	1	1	0	2	1	2	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	1	0	1	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	1	0	0	0	0	0	8	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	10	1	3	1	0	8	30	1	3	1	4	0	0	0	0	0	0	0	0	4	4	0	0	0	0	0	0	0	9	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	1	2	6	1	2	0	0	0	0	0	0	0	0	0	1	5	0	1	0	0	2	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................GGTATACCTTCAGTATACGTAA...............................................................................	22	1	154.00	154	0	0	0	0	0	0	0	4	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	77	7	3	39	6	0	0	0	0	0	0	0	0	0	0	0	0	0	1	6	0	0	0	0	0	0	0	0	0	0	9	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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..........................................................................................................................................................TACCTTCAGTATACGTAA...............................................................................	18	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTAG..................................................................................................................	22	1	2.00	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTA...................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGCA.................................................................................................................	23	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................GTATACTGAATGTATCCTG...................................................................................................................	19	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................GTATACTGAATGTATCCTGAAC................................................................................................................	22	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAAC................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

GGCA---------------------------------------------------------TAATTT-TCA-GCACTTTTG---GATA--ATGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGATAGCACGAGCAACGTGGGATGTG-------------AAACACTTT--T-------AA---------------	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
...................................................................................................................ACGTATACTGAATGTATCCTGA..................................................................................................................	22	1	3761.00	3761	6	19	871	140	137	103	38	24	822	1303	34	130	43	86	2	0	3
...................................................................................................................ACGTATACTGAATGTATCCTG...................................................................................................................	21	1	467.00	467	3	18	236	75	22	7	1	1	27	36	10	24	0	5	0	0	2
...................................................................................................................ACGTATACTGAATGTATCCTGG..................................................................................................................	22	1	205.00	205	3	3	199	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCC.....................................................................................................................	19	1	137.00	137	0	3	69	0	39	25	0	0	1	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCT....................................................................................................................	20	1	95.00	95	1	2	6	1	23	10	8	5	13	15	6	4	0	1	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAA.................................................................................................................	23	1	32.00	32	0	1	19	0	0	0	0	1	3	3	0	0	2	2	0	1	0
...................................................................................................................ACGTATACTGAATGTATC......................................................................................................................	18	1	32.00	32	0	1	16	0	4	5	0	0	0	0	6	0	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTA................................................................................	22	1	26.00	26	0	0	0	0	5	1	0	0	1	1	0	1	3	14	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGA..................................................................................................................	21	1	20.00	20	0	0	0	10	0	0	0	0	3	7	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGAT.................................................................................................................	22	1	13.00	13	0	0	5	0	0	0	0	0	3	3	0	2	0	0	0	0	0
........................................................................................................................................................TATACCTTCAGTATACGTAACA.............................................................................	22	1	12.00	12	0	0	0	0	0	0	0	0	2	7	0	3	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGAA.................................................................................................................	22	1	12.00	12	0	0	4	0	0	0	0	0	4	2	0	0	0	2	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTG...................................................................................................................	20	1	11.00	11	0	1	1	8	0	0	0	0	0	1	0	0	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTAAC..............................................................................	24	1	11.00	11	0	0	4	0	3	2	0	0	1	0	0	1	0	0	0	0	0
........................................................................................................................................................TATACCTTCAGTATACGTAAC..............................................................................	21	1	7.00	7	0	0	4	1	0	0	0	0	1	0	0	1	0	0	0	0	0
...........................................................................................................................TGAATGTATCCTGAGTA...............................................................................................................	17	3	6.67	20	0	0	0	0	0	0	9	11	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACG..................................................................................	20	1	6.00	6	0	0	0	1	3	1	0	0	0	0	0	0	0	1	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTAA...............................................................................	23	1	6.00	6	0	0	0	0	0	0	0	0	1	2	1	1	0	1	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAT.................................................................................................................	23	1	6.00	6	0	0	3	1	0	0	1	0	0	1	0	0	0	0	0	0	0
.........................................................................................................................ACTGAATGTATCCTGA..................................................................................................................	16	1	5.00	5	0	0	0	0	0	0	0	0	1	1	3	0	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGT.................................................................................	21	1	5.00	5	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0
.................................................................................................................AAACGTATACTGAATGTATCCT....................................................................................................................	22	1	5.00	5	0	0	1	1	0	0	0	0	0	1	0	2	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGC..................................................................................................................	22	1	4.00	4	0	0	0	0	0	0	0	0	1	3	0	0	0	0	0	0	0
.......................................................................................................................ATACTGAATGTATCCTGA..................................................................................................................	18	1	4.00	4	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0
...........................................................................................................................TGAATGTATCCTGAGT................................................................................................................	16	3	3.33	10	0	0	0	0	0	0	5	5	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAG.................................................................................................................	23	1	3.00	3	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGT..................................................................................................................	22	1	3.00	3	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGT.........................................................................................................................	15	1	3.00	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGAC.................................................................................................................	22	1	3.00	3	0	0	1	1	0	0	0	0	0	0	0	1	0	0	0	0	0
.................................................................................................................AAACGTATACTGAATGTATCCTG...................................................................................................................	23	1	3.00	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATAC...................................................................................	19	1	3.00	3	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATA....................................................................................	18	1	3.00	3	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................ATACCTTCAGTATACGT.................................................................................	17	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAAC................................................................................................................	24	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................AACGTATACTGAATGTATCCTG...................................................................................................................	22	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................TATACCTTCAGTATACGTAACT.............................................................................	22	1	2.00	2	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0
.....................................................................................................................GTATACTGAATGTATCCTGA..................................................................................................................	20	1	2.00	2	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCT....................................................................................................................	19	1	2.00	2	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................GGTATACCTTCAGTATACG..................................................................................	19	1	2.00	2	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGAAA................................................................................................................	23	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCGA...................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAAA................................................................................................................	24	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................GAATGTATCCTGAGT................................................................................................................	15	3	1.67	5	0	0	0	0	0	0	2	3	0	0	0	0	0	0	0	0	0
...........................................................................................................................TGAATGTATCCTGAG.................................................................................................................	15	3	1.67	5	0	0	0	0	0	0	3	2	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAC.................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
.........................................................................................................................................................ATACCTTCAGTATACGTAA...............................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGT.......................................................................................	15	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
......................................................................................................................TATACTGAATGTATCCTG...................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
......................................................................................................................................................GGTATACCTTCAGTATACGTA................................................................................	21	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTA........................................................................................................................	16	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAGGCG..............................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.........................................................................................................................................................ATACCTTCAGTATACGTAACA.............................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
......................................................................................................................TATACTGAATGTATCCTGAAA................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGACA................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................TATACTGAATGTATCCTGATA................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
..........................................................................................................................................................TACCTTCAGTATACGTA................................................................................	17	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCT.....................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
....................................................................................................................CGTATACTGAATGTATCC.....................................................................................................................	18	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTA...................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGGT.................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAGT................................................................................................................	24	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGG..................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................AATGTATCCTGAGTA...............................................................................................................	15	10	0.90	9	0	0	0	0	0	0	3	6	0	0	0	0	0	0	0	0	0
.........................................................................................................................ACTGAATGTATCCTG...................................................................................................................	15	2	0.50	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
......................................................................................................................TATACTGAATGTATCCTGAAAA...............................................................................................................	22	2	0.50	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
............................................................................................................................GAATGTATCCTGAGTA...............................................................................................................	16	4	0.50	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATTGA....................................................................................................................	20	9	0.11	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
............................................................................................................................GAATGTATCCTGAGTAC..............................................................................................................	17	12	0.08	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0

droSec2

TTTA-TC----------------------------TGC--ATCTAGATCCGCGACACGGCATAATTT-TCA-GCACTTTTG---GATA--ATGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGATAGCACGAGCAACGTGGGATGTG-------------AAACACTTT--T------TAA--------------T	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
...................................................................................................................ACGTATACTGAATGTATCCTGA..................................................................................................................	22	1	859.00	859	378	3	477	1
...................................................................................................................ACGTATACTGAATGTATCCTG...................................................................................................................	21	1	247.00	247	223	1	23	0
....................................................................................................................CGTATACTGAATGTATCCTGA..................................................................................................................	21	1	57.00	57	52	0	5	0
...................................................................................................................ACGTATACTGAATGTATCCT....................................................................................................................	20	1	23.00	23	16	1	6	0
....................................................................................................................CGTATACTGAATGTATCCTG...................................................................................................................	20	1	22.00	22	22	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAT.................................................................................................................	23	1	9.00	9	3	0	6	0
....................................................................................................................CGTATACTGAATGTATCCTGAT.................................................................................................................	22	1	9.00	9	3	0	6	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTA................................................................................	22	1	8.00	8	7	0	1	0
...................................................................................................................ACGTATACTGAATGTATCC.....................................................................................................................	19	1	6.00	6	3	0	3	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGT.................................................................................	21	1	5.00	5	0	0	5	0
.....................................................................................................................................................CGGTATACCTTCAGTATACG..................................................................................	20	1	5.00	5	4	0	1	0
...................................................................................................................ACGTATACTGAATGTATCCTGT..................................................................................................................	22	1	4.00	4	3	0	1	0
........................................................................................................................................................TATACCTTCAGTATACGTAAC..............................................................................	21	1	4.00	4	3	0	1	0
........................................................................................................................................................TATACCTTCAGTATACGTAACA.............................................................................	22	1	4.00	4	1	1	2	0
...................................................................................................................ACGTATACTGAATGTATCCTT...................................................................................................................	21	1	3.00	3	3	0	0	0
...................................................................................................................ACGTATACTGAATGTATC......................................................................................................................	18	1	3.00	3	0	0	3	0
........................................................................................................................................................TATACCTTCAGTATACGTAACT.............................................................................	22	1	3.00	3	3	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTAAC..............................................................................	24	1	2.00	2	1	0	1	0
.....................................................................................................................GTATACTGAATGTATCCTGA..................................................................................................................	20	1	2.00	2	1	0	1	0
....................................................................................................................CGTATACTGAATGTATCCT....................................................................................................................	19	1	2.00	2	2	0	0	0
.................................................................................................................AAACGTATACTGAATGTATCCT....................................................................................................................	22	1	2.00	2	0	0	2	0
...................................................................................................................ACGTATACTGAATGTATCCTC...................................................................................................................	21	1	2.00	2	2	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAC.................................................................................................................	23	1	1.00	1	1	0	0	0
.....................................................................................................................GTATACTGAATGTATCCTG...................................................................................................................	19	1	1.00	1	1	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGG..................................................................................................................	22	1	1.00	1	1	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAAG................................................................................................................	24	1	1.00	1	0	0	1	0
...................................................................................................................ACGTATACTGAATGTATCCTGAA.................................................................................................................	23	1	1.00	1	1	0	0	0
..................................................................................................................AACGTATACTGAATGTATCCTG...................................................................................................................	22	1	1.00	1	1	0	0	0
.....................................................................................................GTGCGACCTCGTAAACGTA...................................................................................................................................	19	1	1.00	1	0	0	1	0
....................................................................................................................CGTATACTGAATGTATCCTGAGT................................................................................................................	23	1	1.00	1	0	0	1	0
....................................................................................................................CGTATACTGAATGTATCCTGAA.................................................................................................................	22	1	1.00	1	1	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGC..................................................................................................................	22	1	1.00	1	1	0	0	0
.................................................................................................................AAACGTATACTGAATGTATCCTGT..................................................................................................................	24	1	1.00	1	0	0	1	0
....................................................................................................................................................................................AGCACGAGCAACGTGGGATGTG-------------....................................	22	1	1.00	1	0	0	1	0
...................................................................................................................ACGTATACTGAATGTATCCTGAG.................................................................................................................	23	1	1.00	1	0	0	1	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTAA...............................................................................	23	1	1.00	1	1	0	0	0
.......................................................................................................................ATACTGAATGTATCCTGA..................................................................................................................	18	1	1.00	1	0	0	1	0
....................................................................................................................CGTATACTGAATGTATCCTGAG.................................................................................................................	22	1	1.00	1	0	0	1	0
......................................................................................................................TATACTGAATGTATCCTGA..................................................................................................................	19	1	1.00	1	0	0	1	0
......................................................................................................................................................GGTATACCTTCAGTATACGTA................................................................................	21	1	1.00	1	1	0	0	0
.........................................................................................................................................................ATACCTTCAGTATACGTAACA.............................................................................	21	1	1.00	1	0	0	1	0
....................................................................................................................CGTATACTGAATGTATCCTGG..................................................................................................................	21	1	1.00	1	1	0	0	0

droYak3

GACG-----------------------------------CG--------------------TAATTT-TCA-GCACTTTTG---GACT--AAGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGAAAGCACGAGCAACGTGGGATGTG-------------AAACACTTT--T------TAATACTGCTTAATACAC	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
...................................................................................................................ACGTATACTGAATGTATCCTGA..................................................................................................................	22	1	4354.00	4354	2	282	3921	130	0	0	0	3	0	16	0
...................................................................................................................ACGTATACTGAATGTATCC.....................................................................................................................	19	1	496.00	496	0	2	493	0	0	0	0	0	0	1	0
...................................................................................................................ACGTATACTGAATGTATCCTG...................................................................................................................	21	1	412.00	412	0	287	108	13	0	1	0	1	0	2	0
.................................................................................................................AAACGTATACTGAATGTATCCT....................................................................................................................	22	1	95.00	95	0	0	94	1	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGA..................................................................................................................	21	1	79.00	79	0	44	34	1	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCT....................................................................................................................	20	1	75.00	75	0	22	38	2	0	0	0	2	0	11	0
........................................................................................................................................................TATACCTTCAGTATACGTAACAC............................................................................	23	1	65.00	65	0	0	65	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATC......................................................................................................................	18	1	47.00	47	0	0	45	1	0	0	0	0	0	1	0
........................................................................................................................................................TATACCTTCAGTATACGTAAC..............................................................................	21	1	35.00	35	0	0	34	1	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAA.................................................................................................................	23	1	35.00	35	0	2	33	0	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTG...................................................................................................................	20	1	29.00	29	0	27	1	1	0	0	0	0	0	0	0
.................................................................................................................AAACGTATACTGAATGTATCCC....................................................................................................................	22	1	28.00	28	0	0	28	0	0	0	0	0	0	0	0
.................................................................................................................AAACGTATACTGAATGTATCC.....................................................................................................................	21	1	22.00	22	0	0	22	0	0	0	0	0	0	0	0
........................................................................................................................................................TATACCTTCAGTATACGTAACT.............................................................................	22	1	21.00	21	0	0	21	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAT.................................................................................................................	23	1	18.00	18	0	0	16	2	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGAT.................................................................................................................	22	1	17.00	17	0	0	11	6	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGAA.................................................................................................................	22	1	15.00	15	0	0	14	1	0	0	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTAAC..............................................................................	24	1	14.00	14	0	0	14	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGC..................................................................................................................	22	1	13.00	13	0	0	12	0	0	0	0	0	0	1	0
........................................................................................................................................................TATACCTTCAGTATACGTAACC.............................................................................	22	1	11.00	11	0	0	11	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAC.................................................................................................................	23	1	10.00	10	0	1	8	1	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCC....................................................................................................................	20	1	10.00	10	0	0	10	0	0	0	0	0	0	0	0
........................................................................................................................................................TATACCTTCAGTATACGTAACA.............................................................................	22	1	9.00	9	0	3	5	1	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGAC.................................................................................................................	22	1	8.00	8	0	0	8	0	0	0	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTA................................................................................	22	1	8.00	8	0	0	6	1	0	0	0	0	0	1	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGT.................................................................................	21	1	8.00	8	0	2	4	2	0	0	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACG..................................................................................	20	1	6.00	6	0	3	3	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTA........................................................................................................................	16	1	6.00	6	0	0	0	0	0	0	0	0	0	6	0
.....................................................................................................................GTATACTGAATGTATCCTGA..................................................................................................................	20	1	6.00	6	0	4	2	0	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGACC................................................................................................................	23	1	5.00	5	0	0	5	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGG..................................................................................................................	22	1	5.00	5	2	1	2	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGT.........................................................................................................................	15	1	3.00	3	0	0	0	0	0	0	0	0	0	3	0
...................................................................................................................ACGTATACTGAATGTATCCTGT..................................................................................................................	22	1	3.00	3	0	2	1	0	0	0	0	0	0	0	0
.................................................................................................................AAACGTATACTGAATGTATCCTG...................................................................................................................	23	1	3.00	3	0	0	3	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAGT................................................................................................................	24	1	3.00	3	0	0	2	1	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTT...................................................................................................................	21	1	2.00	2	0	1	1	0	0	0	0	0	0	0	0
..................................................................................................................AACGTATACTGAATGTATCCTG...................................................................................................................	22	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCC.....................................................................................................................	18	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0
......................................................................................................................TATACTGAATGTATCCTGA..................................................................................................................	19	1	2.00	2	0	1	1	0	0	0	0	0	0	0	0
........................................................................................................................................................TATACCTTCAGTATACGTAACACT...........................................................................	24	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTAACT.............................................................................	25	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTA...................................................................................................................	21	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGATA................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
......................................................................................................................TATACTGAATGTATCCTGAA.................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
................................................................................................................TAAACGTATACTGAATGTATCC.....................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAAA................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................GTATACTGAATGTATCCTG...................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.................................................................................................................AAACGTATACTGAATGTATC......................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..................................................................................................................AACGTATACTGAATGTATCCT....................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................GTATACTGAATGTATCCTGAG.................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAGTGTATC...........................................................................................................	29	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTC...................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCT.....................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................ATACTGAATGTATCCTGA..................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................ATACCTTCAGTATACGTAACAC............................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCT....................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGACA................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................ATACTGAATGTATCCTGAGTGTATCCT.........................................................................................................	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAGGCC..............................................................................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAG.................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTAC...............................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGTT.................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
......................................................................................................................TATACTGAATGTATCCTG...................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................TACTGAATGTATCCTGAT.................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................GTATACTGAATGTATCCTGATC................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGAGA................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.................................................................................................................AAACGTATACTGAATGTATCCTGA..................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0

droEre2

GACG-----------------------------------TA--------------------TAATTT-TCA-GCACTTTTG---GATT--AAGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGAAAGCACGAGCAACGTGGGATGTG-------------AAACACTTT--T------TAAGACT--C---TACAA	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
...................................................................................................................ACGTATACTGAATGTATCCTGA..................................................................................................................	22	1	1839.00	1839	1431	324	0	77	5	2	0
...................................................................................................................ACGTATACTGAATGTATCCTG...................................................................................................................	21	1	645.00	645	618	15	0	8	3	1	0
....................................................................................................................CGTATACTGAATGTATCCTGA..................................................................................................................	21	1	144.00	144	135	8	0	1	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTG...................................................................................................................	20	1	56.00	56	56	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCC.....................................................................................................................	19	1	34.00	34	2	31	0	0	1	0	0
...................................................................................................................ACGTATACTGAATGTATCCT....................................................................................................................	20	1	31.00	31	23	4	0	2	1	1	0
.................................................................................................................AAACGTATACTGAATGTATCCT....................................................................................................................	22	1	15.00	15	2	11	0	2	0	0	0
........................................................................................................................................................TATACCTTCAGTATACGTAACA.............................................................................	22	1	10.00	10	3	5	0	2	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAA.................................................................................................................	23	1	8.00	8	8	0	0	0	0	0	0
........................................................................................................................................................TATACCTTCAGTATACGTAACAC............................................................................	23	1	8.00	8	0	8	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTT...................................................................................................................	21	1	8.00	8	7	0	0	1	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGT..................................................................................................................	22	1	8.00	8	5	3	0	0	0	0	0
.....................................................................................................................GTATACTGAATGTATCCTGA..................................................................................................................	20	1	8.00	8	8	0	0	0	0	0	0
........................................................................................................................................................TATACCTTCAGTATACGTAAC..............................................................................	21	1	8.00	8	0	8	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACG..................................................................................	20	1	5.00	5	5	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAT.................................................................................................................	23	1	5.00	5	4	1	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGG..................................................................................................................	22	1	4.00	4	3	0	0	1	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTA................................................................................	22	1	4.00	4	4	0	0	0	0	0	0
.....................................................................................................................GTATACTGAATGTATCCTG...................................................................................................................	19	1	3.00	3	3	0	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGTAAC..............................................................................	24	1	2.00	2	0	2	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCT....................................................................................................................	19	1	2.00	2	2	0	0	0	0	0	0
.......................................................................................................................ATACTGAATGTATCCTGA..................................................................................................................	18	1	2.00	2	1	1	0	0	0	0	0
......................................................................................................................TATACTGAATGTATCCTGA..................................................................................................................	19	1	2.00	2	2	0	0	0	0	0	0
.................................................................................................................AAACGTATACTGAATGTATCC.....................................................................................................................	21	1	2.00	2	0	2	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATC......................................................................................................................	18	1	2.00	2	0	2	0	0	0	0	0
.........................................................................................................................................................ATACCTTCAGTATACGTAACAC............................................................................	22	1	2.00	2	0	2	0	0	0	0	0
......................................................................................................................................................GGTATACCTTCAGTATACG..................................................................................	19	1	2.00	2	2	0	0	0	0	0	0
.................................................................................................................AAACGTATACTGAATGTATCCTC...................................................................................................................	23	1	1.00	1	0	0	0	1	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAC.................................................................................................................	23	1	1.00	1	1	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAG.................................................................................................................	23	1	1.00	1	1	0	0	0	0	0	0
......................................................................................................................TATACTGAATGTATCCTG...................................................................................................................	18	1	1.00	1	1	0	0	0	0	0	0
......................................................................................................................TATACTGAATGTATCCTGAAA................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGACA................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0
..........................................................................................................................................................TACCTTCAGTATACGTAACT.............................................................................	20	1	1.00	1	1	0	0	0	0	0	0
................................................................................................................TAAACGTATACTGAATGTATCC.....................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0
.................................................................................................................AAACGTATACTGAATGTATCCC....................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0
.................................................................................................................AAACGTATACTGAATGTATCCTGA..................................................................................................................	24	1	1.00	1	1	0	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATA....................................................................................	18	1	1.00	1	0	0	0	0	1	0	0
....................................................................................................................CGTATACTGAATGTATCCTGAG.................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
.....................................................................................................................GTATACTGAATGTATCCTGAA.................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
...........................................................................................................................................................ACCTTCAGTATACGTAACA.............................................................................	19	1	1.00	1	0	1	0	0	0	0	0
..........................................................................................................................................................TACCTTCAGTATACGTAAC..............................................................................	19	1	1.00	1	0	1	0	0	0	0	0
.........................................................................................................................................................ATACCTTCAGTATACGTAAC..............................................................................	20	1	1.00	1	1	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGT..................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGAGTA...............................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCC.....................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTGC..................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
.....................................................................................................................................................CGGTATACCTTCAGTATACGT.................................................................................	21	1	1.00	1	0	0	0	1	0	0	0
.....................................................................................................................GTATACTGAATGTATCCTGATA................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGAA.................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
........................................................................................................................................................TATACCTTCAGTATACGTAACT.............................................................................	22	1	1.00	1	0	1	0	0	0	0	0
....................................................................................................................CGTATACTGAATGTATCCTGAT.................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
....................................................................................................................................................CCGGTATACCTTCAGTATACGTAAC..............................................................................	25	1	1.00	1	0	1	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCC....................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0
...................................................................................................................ACGTATACTGAATGTATCCTC...................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
....................................................................................................................................................................................................GATGTG-------------AAACACTTT--T------TT................	18	2	0.50	1	0	0	0	1	0	0	0
...................................................................................................................ACGTATACTGAATGTATCTG....................................................................................................................	20	2	0.50	1	1	0	0	0	0	0	0

dpe-mir-iab-4

scaffold_0:11526573-11526640 +

Known

Unknown

3pUTR

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads