ID:

dpe-mir-7

 Coordinate:

scaffold_4:2540095-2540182 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intron

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-32.5 -32.5 -32.5

Flybase annnotation

intron [Dper\GL17034-in]; pre_miRNA [Dper\mir-7-RM]; utr5 [utr5_plus_5311]; miRNA [Dper\miR-7-RA]

No Repeatable elements found

Sense Strand Reads

GCAAATCAAATCGCTCCATCCAAACTAACTAACCGATTGGCCTCTCCTGGGAGTGTATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTCTGCTAATAACAATAAATCCCTTGTCTTCTTACGGCGTGCATCTGTGCTCTTCATTCTATCGATGGTTAACCAAATTAAACGGAACTCGACATT

*************************************************(((.(((((.(((((.(((((((.((.((((((((((((.(((....))))))))))..))))).)).)))))))))))).))))))))...*********************************************** 		Read size # Mismatch Hit Count Total Norm Total V050

head

 V057

head

 M042

female body

 V111

male body		 V042

embryo

 M021

embryo
................................................................TGGAAGACTAGTGATTTTGTTG...................................................................................................... 22 0 1 15885.00 15885 4788 3628 3441 3736 292 0
................................................................TGGAAGACTAGTGATTTTGTT....................................................................................................... 21 0 1 5545.00 5545 1870 2147 547 927 53 1
................................................................TGGAAGACTAGTGATTTTGTTGT..................................................................................................... 23 0 1 4812.00 4812 668 689 1816 1447 189 3
................................................................TGGAAGACTAGTGATTTTGTTGTT.................................................................................................... 24 0 1 3828.00 3828 896 877 881 893 275 6
................................................................TGGAAGACTAGTGATTTTGT........................................................................................................ 20 0 1 1329.00 1329 379 471 90 374 13 2
.................................................................GGAAGACTAGTGATTTTGTTG...................................................................................................... 21 0 1 309.00 309 0 0 309 0 0 0
................................................................TGGAAGACTAGTGATTTTGTTT...................................................................................................... 22 1 1 196.00 196 50 79 16 48 3 0
................................................................TGGAAGACTAGTGATTTTGTTA...................................................................................................... 22 1 1 176.00 176 12 27 101 23 13 0
.................................................................GGAAGACTAGTGATTTTGTTGT..................................................................................................... 22 0 1 161.00 161 0 0 161 0 0 0
................................................................TGGAAGACTAGTGATTTTGTTGTTT................................................................................................... 25 0 1 155.00 155 16 32 31 64 9 3
................................................................TGGAAGACGAGTGATTTTGTTG...................................................................................................... 22 1 1 135.00 135 0 6 128 1 0 0
........................................................................................................CAATAAATCCCTTGTCTTCTTA.............................................................. 22 0 1 124.00 124 9 3 3 0 106 3
................................................................TGGAAGACTAGTGATTTTGTTGTTAA.................................................................................................. 26 2 1 121.00 121 0 0 114 4 3 0
................................................................TGGAAGACTAGTGATTTTGTTGA..................................................................................................... 23 1 1 116.00 116 13 21 58 22 2 0
................................................................TGGAAGACTAGTGATTTTGTTGTTA................................................................................................... 25 1 1 111.00 111 3 4 83 9 11 1
................................................................TGGAAGACTAGTGATTTTG......................................................................................................... 19 0 1 96.00 96 31 38 15 12 0 0
.................................................................GGAAGACTAGTGATTTTGTTGTT.................................................................................................... 23 0 1 82.00 82 1 0 81 0 0 0
................................................................TGGAAGACTAGTGATTTTGTTAA..................................................................................................... 23 2 1 79.00 79 2 2 63 6 6 0
................................................................TGGAAGACTAGCGATTTTGTTG...................................................................................................... 22 1 1 71.00 71 26 42 0 1 2 0
................................................................TGGAAGACTAGGGATTTTGTTG...................................................................................................... 22 1 1 68.00 68 16 49 2 1 0 0
................................................................TGGAAGACTAGTGATTTTGTTGTAA................................................................................................... 25 2 1 63.00 63 1 1 58 3 0 0
................................................................TGGAAGACGAGTGATTTTGTTGT..................................................................................................... 23 1 1 59.00 59 0 1 58 0 0 0
................................................................TGGAAGACTAGTGATTTTGTTC...................................................................................................... 22 1 1 58.00 58 9 12 4 33 0 0
................................................................TGGAAGACTAGTGATTTTGTTGTTAAA................................................................................................. 27 3 1 54.00 54 0 0 52 1 1 0
.................................................................GGAAGACTAGTGATTTTGTT....................................................................................................... 20 0 1 53.00 53 0 0 53 0 0 0
................................................................TGGAAGACAAGTGATTTTGTTG...................................................................................................... 22 1 1 48.00 48 0 1 47 0 0 0
................................................................TGGAAGACTAGCGATTTTGTT....................................................................................................... 21 1 1 44.00 44 10 30 2 2 0 0
................................................................TGGAAGACTAGTGATTTTGTTGTTC................................................................................................... 25 1 1 43.00 43 1 0 0 39 3 0
................................................................TGGAAGACGAGTGATTTTGTTGTT.................................................................................................... 24 1 1 40.00 40 2 0 38 0 0 0
...............................................................CTGGAAGACTAGTGATTTTGTTG...................................................................................................... 23 1 1 37.00 37 14 16 5 1 1 0
..................................................................GAAGACTAGTGATTTTGTTG...................................................................................................... 20 0 1 36.00 36 4 1 19 9 0 3
................................................................CGGAAGACTAGTGATTTTGTTG...................................................................................................... 22 1 1 35.00 35 12 16 0 7 0 0
................................................................TGGAAGACTAGTGATTTTTTTG...................................................................................................... 22 1 1 35.00 35 16 9 4 6 0 0
................................................................TGGAGGACTAGTGATTTTGTTG...................................................................................................... 22 1 1 34.00 34 10 12 5 7 0 0
................................................................TGGAAGACAAGTGATTTTGTTGT..................................................................................................... 23 1 1 33.00 33 0 0 33 0 0 0
................................................................TGGAACACTAGTGATTTTGTTG...................................................................................................... 22 1 1 31.00 31 26 4 1 0 0 0
................................................................TGGAAGACTAGTGATTTTGTTGTA.................................................................................................... 24 1 1 31.00 31 1 1 25 2 2 0
................................................................TGGAAGACGAGTGATTTTGTT....................................................................................................... 21 1 1 28.00 28 0 2 26 0 0 0
................................................................TGGGAGACTAGTGATTTTGTTG...................................................................................................... 22 1 1 28.00 28 7 15 3 3 0 0
................................................................TGGAAGACCAGTGATTTTGTTG...................................................................................................... 22 1 1 27.00 27 2 0 25 0 0 0
................................................................TTGAAGACTAGTGATTTTGTTG...................................................................................................... 22 1 1 26.00 26 6 3 4 7 1 5
................................................................TGGAAGACTAGTGATTTTGTTGTAAA.................................................................................................. 26 3 2 26.00 52 0 0 48 1 3 0
................................................................GGGAAGACTAGTGATTTTGTTG...................................................................................................... 22 1 1 25.00 25 3 10 10 2 0 0
................................................................TGTAAGACTAGTGATTTTGTTG...................................................................................................... 22 1 1 25.00 25 6 3 0 15 1 0
................................................................TGGAAGGCTAGTGATTTTGTTG...................................................................................................... 22 1 1 25.00 25 6 11 0 7 1 0
................................................................TGGAATACTAGTGATTTTGTTG...................................................................................................... 22 1 1 23.00 23 12 3 1 6 1 0
................................................................TGGAAGACTAGTGATTTTGCTG...................................................................................................... 22 1 1 23.00 23 9 13 0 1 0 0
................................................................TGGAAGACTAGTGATTTT.......................................................................................................... 18 0 1 23.00 23 7 10 6 0 0 0
................................................................TGGAAGACTAGTGATTTTGTTAAA.................................................................................................... 24 3 1 22.00 22 0 0 22 0 0 0
................................................................TGGCAGACTAGTGATTTTGTT....................................................................................................... 21 1 1 21.00 21 2 19 0 0 0 0
................................................................TGGAAGACTGGTGATTTTGTTG...................................................................................................... 22 1 1 21.00 21 5 10 2 2 2 0
.................................................................TGAAGACTAGTGATTTTGTTG...................................................................................................... 21 1 1 21.00 21 3 0 4 13 0 1
........................................................................................................CAATAAATCCCTTGTCTTCTT............................................................... 21 0 1 20.00 20 4 11 3 0 2 0
................................................................TGGAGGACTAGTGATTTTGTT....................................................................................................... 21 1 1 20.00 20 4 11 1 4 0 0
................................................................TGGAAGACTAGGGATTTTGTTGT..................................................................................................... 23 1 1 18.00 18 3 13 1 1 0 0
................................................................TGGGAGACTAGTGATTTTGTT....................................................................................................... 21 1 1 18.00 18 4 13 0 1 0 0
................................................................TGGAAGACTAGCGATTTTGTTGTT.................................................................................................... 24 1 1 18.00 18 5 10 1 2 0 0
................................................................TGGAAGACTAGGGATTTTGTT....................................................................................................... 21 1 1 18.00 18 5 13 0 0 0 0
................................................................TGGAAGACTAGTGATTTTGTTTT..................................................................................................... 23 1 1 18.00 18 4 7 3 3 1 0
................................................................TGGAAGACTAGCGATTTTGTTGT..................................................................................................... 23 1 1 17.00 17 3 10 1 3 0 0
................................................................TGGAAGACAAGTGATTTTGTT....................................................................................................... 21 1 1 17.00 17 0 0 17 0 0 0
..................................................................GAAGACTAGTGATTTTGTTGT..................................................................................................... 21 0 1 17.00 17 3 0 11 2 0 1
................................................................TGGAAGAGTAGTGATTTTGTTG...................................................................................................... 22 1 1 17.00 17 2 14 0 1 0 0
................................................................TGGAAGACTAGTGCTTTTGTTG...................................................................................................... 22 1 1 17.00 17 4 12 0 0 1 0
................................................................TGGAAGACTAGTGATTTTGTCG...................................................................................................... 22 1 1 17.00 17 4 8 3 2 0 0
................................................................TGGAAGACTAGTGGTTTTGTTG...................................................................................................... 22 1 1 17.00 17 4 8 3 1 1 0
................................................................TGGAAGACTAGAGATTTTGTTG...................................................................................................... 22 1 1 16.00 16 7 7 0 2 0 0
................................................................TGGAAGACTAGTGATTTTGTTCT..................................................................................................... 23 1 1 16.00 16 0 3 1 12 0 0
................................................................TGGCAGACTAGTGATTTTGTTG...................................................................................................... 22 1 1 16.00 16 7 7 0 2 0 0
................................................................TGGAAGGCTAGTGATTTTGTT....................................................................................................... 21 1 1 15.00 15 5 9 0 1 0 0
.................................................................GGAAGACTGGTGATTTTGTTG...................................................................................................... 21 1 1 15.00 15 0 0 15 0 0 0
................................................................TTGAAGACTAGTGATTTTGTTGT..................................................................................................... 23 1 1 15.00 15 1 0 3 5 0 6
................................................................AGGAAGACTAGTGATTTTGTTG...................................................................................................... 22 1 1 15.00 15 4 9 1 1 0 0
................................................................TGGAAGATTAGTGATTTTGTTG...................................................................................................... 22 1 1 15.00 15 3 7 1 4 0 0
................................................................TGGAAGACTAGTGATTTTGTTGC..................................................................................................... 23 1 1 14.00 14 5 4 1 4 0 0
................................................................TGGAAGACTAGTGCTTTTGTT....................................................................................................... 21 1 1 14.00 14 1 12 0 0 1 0
................................................................GGGAAGACTAGTGATTTTGTTGT..................................................................................................... 23 1 1 14.00 14 0 3 10 0 1 0
................................................................TGGAAGAGTAGTGATTTTGTT....................................................................................................... 21 1 1 14.00 14 1 13 0 0 0 0
................................................................TGGAAGACTAGGGATTTTGTTGTT.................................................................................................... 24 1 1 14.00 14 3 8 1 2 0 0
................................................................TGGAAGACTAGTGATTTTGCT....................................................................................................... 21 1 1 14.00 14 3 11 0 0 0 0
................................................................TGGAAGACTAGCGATTTTGT........................................................................................................ 20 1 1 14.00 14 1 12 0 1 0 0
................................................................TGGAAGACTAGTGATTTTGTTTTT.................................................................................................... 24 1 1 14.00 14 4 5 1 2 2 0
................................................................TGGAAGACAAGTGATTTTGTTGTT.................................................................................................... 24 1 1 13.00 13 0 0 13 0 0 0
................................................................TGGAAGAATAGTGATTTTGTT....................................................................................................... 21 1 1 13.00 13 5 7 0 0 1 0
................................................................TGGAAGACTAGTGATCTTGTTG...................................................................................................... 22 1 1 13.00 13 5 4 0 4 0 0
................................................................TTGAAGACTAGTGATTTTGTTGTT.................................................................................................... 24 1 1 13.00 13 1 1 0 1 1 9
................................................................TGGAAGACTAGTGATTTTGTTGAA.................................................................................................... 24 2 1 13.00 13 0 1 6 6 0 0
................................................................AGGAAGACTAGTGATTTTGTT....................................................................................................... 21 1 1 13.00 13 1 11 1 0 0 0
................................................................TAGAAGACTAGTGATTTTGTTG...................................................................................................... 22 1 1 13.00 13 7 3 0 1 0 2
................................................................TGGAAGACTAGTGATTTTTTTGT..................................................................................................... 23 1 1 13.00 13 2 3 6 2 0 0
................................................................TCGAAGACTAGTGATTTTGTTG...................................................................................................... 22 1 1 13.00 13 3 1 4 5 0 0
...............................................................CTGGAAGACTAGTGATTTTGTT....................................................................................................... 22 1 1 12.00 12 2 10 0 0 0 0
................................................................TGGAAGACTAGTGATTTTTTT....................................................................................................... 21 1 1 12.00 12 6 4 0 2 0 0
................................................................TGGAAGACTAGTGAGTTTGTTG...................................................................................................... 22 1 1 12.00 12 4 8 0 0 0 0
................................................................TGGAAGACTAGTGATTTTGGTG...................................................................................................... 22 1 1 12.00 12 4 7 1 0 0 0
................................................................TGGAAGACTAGTGACTTTGTTG...................................................................................................... 22 1 1 11.00 11 5 5 0 1 0 0
................................................................TGGAAGACCAGTGATTTTGTTGT..................................................................................................... 23 1 1 11.00 11 0 0 10 1 0 0
.................................................................TGAAGACTAGTGATTTTGTTGT..................................................................................................... 22 1 1 11.00 11 0 0 3 7 0 1
................................................................TGCAAGACTAGTGATTTTGTTG...................................................................................................... 22 1 1 11.00 11 2 7 0 2 0 0
.................................................................GGAAGACTAGTGATTTTGTTAA..................................................................................................... 22 2 1 11.00 11 0 0 11 0 0 0
................................................................TGGAAGACTAGTGATTCTGTTG...................................................................................................... 22 1 1 11.00 11 5 6 0 0 0 0
................................................................TGGAAGACTAGTGATTTTCTTG...................................................................................................... 22 1 1 11.00 11 1 9 0 1 0 0
................................................................TGGAAGCCTAGTGATTTTGTT....................................................................................................... 21 1 1 11.00 11 2 9 0 0 0 0
................................................................TGGAAGACTGGTGATTTTGTTGTT.................................................................................................... 24 1 1 11.00 11 4 6 1 0 0 0
................................................................TGAAAGACTAGTGATTTTGTTG...................................................................................................... 22 1 1 11.00 11 3 2 2 4 0 0
..................................................................GAAGACTAGTGATTTTGTTGTT.................................................................................................... 22 0 1 11.00 11 0 1 3 1 0 6
................................................................TGGAAGACTAGTGATTTGGTTG...................................................................................................... 22 1 1 11.00 11 2 9 0 0 0 0
................................................................TGGAAGACTACTGATTTTGTTG...................................................................................................... 22 1 1 10.00 10 2 5 2 1 0 0
................................................................TGGAAGACCAGTGATTTTGTTGTT.................................................................................................... 24 1 1 10.00 10 1 1 7 1 0 0
................................................................TTGAAGACTAGTGATTTTGTT....................................................................................................... 21 1 1 10.00 10 2 4 0 2 0 2
................................................................TGGAACACTAGTGATTTTGTT....................................................................................................... 21 1 1 10.00 10 6 3 1 0 0 0
..................................................................GAAGACTAGTGATTTTGTT....................................................................................................... 19 0 1 10.00 10 2 0 3 5 0 0
.........................................................................................................AATAAATCCCTTGTCTTCTTA.............................................................. 21 0 1 10.00 10 0 0 4 0 5 1
................................................................TGGAAGACTAGTGATTTTGTTGTTTT.................................................................................................. 26 1 1 10.00 10 1 1 0 8 0 0
................................................................TGGAAGTCTAGTGATTTTGTTG...................................................................................................... 22 1 1 10.00 10 3 7 0 0 0 0
................................................................GGGAAGACTAGTGATTTTGTT....................................................................................................... 21 1 1 9.00 9 2 5 2 0 0 0
................................................................TGTAAGACTAGTGATTTTGTTGT..................................................................................................... 23 1 1 9.00 9 0 1 0 7 0 1
...............................................................CTGGAAGACTAGTGATTTTGTTGTT.................................................................................................... 25 1 1 9.00 9 2 1 5 0 1 0
................................................................CGGAAGACTAGTGATTTTGTTGT..................................................................................................... 23 1 1 9.00 9 2 3 2 2 0 0
................................................................TGGAAGCCTAGTGATTTTGTTG...................................................................................................... 22 1 1 9.00 9 3 4 1 1 0 0
................................................................TGGAAGACTAGTGATTTTTTTT...................................................................................................... 22 2 1 9.00 9 2 7 0 0 0 0
................................................................TGGAAGACTGGTGATTTTGTT....................................................................................................... 21 1 1 9.00 9 0 6 1 2 0 0
................................................................TAGAAGACTAGTGATTTTGTTGTT.................................................................................................... 24 1 1 9.00 9 3 4 0 1 0 1
................................................................TGGAAGACTAGTGATTTCGTTG...................................................................................................... 22 1 1 9.00 9 5 2 2 0 0 0
................................................................TGGAAGTCTAGTGATTTTGTTGTT.................................................................................................... 24 1 1 9.00 9 2 5 0 0 2 0
................................................................TGGAAGAATAGTGATTTTGTTG...................................................................................................... 22 1 1 9.00 9 3 6 0 0 0 0
................................................................TGGAAGACTAGTTATTTTGTTG...................................................................................................... 22 1 1 9.00 9 4 3 1 1 0 0
.................................................................GGAAGACTAGTGATTTTGTTA...................................................................................................... 21 1 1 9.00 9 0 0 9 0 0 0
................................................................TGGAAGACTAGTGATTTTGTTGG..................................................................................................... 23 1 1 8.00 8 0 0 6 0 1 1
................................................................TAGAAGACTAGTGATTTTGTT....................................................................................................... 21 1 1 8.00 8 3 4 1 0 0 0
.................................................................TGAAGACTAGTGATTTTGTTGTT.................................................................................................... 23 1 1 8.00 8 0 0 0 3 0 5
................................................................TGGAAGACTAGTGATTTTATTG...................................................................................................... 22 1 1 8.00 8 5 2 0 1 0 0
................................................................TGGAAGACTAGTAATTTTGTTG...................................................................................................... 22 1 1 8.00 8 4 2 1 1 0 0
.................................................................GGAAGACTGGTGATTTTGTTGT..................................................................................................... 22 1 1 8.00 8 0 0 8 0 0 0
................................................................TGGTAGACTAGGGATTTTGTTG...................................................................................................... 22 2 1 8.00 8 2 6 0 0 0 0
................................................................TGTAAGACTAGTGATTTTGTTGTT.................................................................................................... 24 1 1 8.00 8 1 2 0 2 0 3
.................................................................GGAAGACTAGTGATTTTGTTGTTAA.................................................................................................. 25 2 1 8.00 8 0 0 8 0 0 0
................................................................TGGAAGACTAGTGATTTTGTC....................................................................................................... 21 1 1 8.00 8 1 6 0 1 0 0
................................................................TGGAAGACCAGTGATTTTGTT....................................................................................................... 21 1 1 8.00 8 1 2 5 0 0 0
................................................................TGGAAGACTAGTGCTTTTGTTGTT.................................................................................................... 24 1 1 8.00 8 2 5 0 0 1 0
................................................................AGGAAGACTAGTGATTTTGTTGT..................................................................................................... 23 1 1 7.00 7 3 1 3 0 0 0
................................................................TGGAAGACTAGTGATTTTGTA....................................................................................................... 21 1 1 7.00 7 1 5 0 1 0 0
................................................................TGGTAGACTAGTGATTTTGTTG...................................................................................................... 22 1 1 7.00 7 1 5 0 1 0 0
.................................................................GGAAGACTAGTGATTTTGTTGA..................................................................................................... 22 1 1 7.00 7 0 0 7 0 0 0
................................................................TGTAAGACTAGTGATTTTGTT....................................................................................................... 21 1 1 7.00 7 2 2 0 3 0 0
................................................................TGGAAGGCTAGTGATTTTGTTGTT.................................................................................................... 24 1 1 7.00 7 2 4 0 1 0 0
................................................................TGGAAGACTAGTGATTTTGC........................................................................................................ 20 1 1 7.00 7 2 5 0 0 0 0
................................................................TCGAAGACTAGTGATTTTGTTGTT.................................................................................................... 24 1 1 7.00 7 1 2 0 1 1 2
................................................................TGGCAGACTAGTGATTTTGTTGT..................................................................................................... 23 1 1 7.00 7 1 5 0 1 0 0
.................................................................GGAAGACTAGTGATTTTGTTGTTA................................................................................................... 24 1 1 7.00 7 0 0 7 0 0 0
................................................................TGGAAGACTAGTGCTTTTGT........................................................................................................ 20 1 1 7.00 7 2 3 0 1 1 0
................................................................TGGAAGACTAGTGTTTTTGTT....................................................................................................... 21 1 1 7.00 7 0 7 0 0 0 0
................................................................TGGAAGACGAGTGATTTTGT........................................................................................................ 20 1 1 7.00 7 0 0 7 0 0 0
................................................................TGGAAGACTAGAGATTTTGTT....................................................................................................... 21 1 1 7.00 7 3 4 0 0 0 0
................................................................TGAAAGACTAGTGATTTTGTT....................................................................................................... 21 1 1 7.00 7 3 3 1 0 0 0
................................................................TGGAGGACTAGTGATTTTGTTGT..................................................................................................... 23 1 1 7.00 7 1 4 0 2 0 0
................................................................TGGAAGACTAGTGATCTTGTT....................................................................................................... 21 1 1 7.00 7 1 5 0 1 0 0
.........................................................................................................AATAAATCCCTTGTCTTCTTAA............................................................. 22 1 1 7.00 7 0 2 4 1 0 0
................................................................TGGAAGACTAGTGATTTTTTTGTT.................................................................................................... 24 1 1 6.00 6 1 3 0 1 1 0
...............................................................CTGGAAGACTAGTGATTTTGTTGT..................................................................................................... 24 1 1 6.00 6 3 1 1 1 0 0
................................................................TGGAAGGCTAGGGATTTTGTT....................................................................................................... 21 2 1 6.00 6 1 5 0 0 0 0
................................................................TGGAAGACTAGAGATTTTGTTGTT.................................................................................................... 24 1 1 6.00 6 2 3 0 0 1 0
................................................................TGAAAGACTAGTGATTTTGTTGT..................................................................................................... 23 1 1 6.00 6 0 1 1 3 1 0
................................................................TGGGAGACTAGTGATTTTGTTGT..................................................................................................... 23 1 1 6.00 6 0 5 0 1 0 0
................................................................AGGAAGACTAGTGATTTTGTTGTT.................................................................................................... 24 1 1 6.00 6 0 5 0 1 0 0
................................................................TGGAAGACTAGTTATTTTGTT....................................................................................................... 21 1 1 6.00 6 0 6 0 0 0 0
................................................................TGGAAGACTAGTGTTTTTGTTG...................................................................................................... 22 1 1 6.00 6 1 4 0 1 0 0
................................................................TGGAAGGCTAGTGATTTTGTTGT..................................................................................................... 23 1 1 6.00 6 2 1 0 3 0 0
................................................................TGGAAGACTATTGATTTTGTTG...................................................................................................... 22 1 1 6.00 6 2 3 1 0 0 0
...................................................................AAGACTAGTGATTTTGTTG...................................................................................................... 19 0 1 6.00 6 0 3 3 0 0 0
................................................................GGGAAGACTAGTGATTTTGTTGTT.................................................................................................... 24 1 1 6.00 6 0 1 4 0 1 0
...............................................................CTGGAAGACTAGTGATTTTGT........................................................................................................ 21 1 1 6.00 6 3 3 0 0 0 0
................................................................TGGAAGACTAGTGATTTTGTTAT..................................................................................................... 23 1 1 6.00 6 0 1 3 2 0 0
................................................................TGGAACACTAGTGATTTTGTTGTT.................................................................................................... 24 1 1 6.00 6 5 1 0 0 0 0
................................................................TGGAAGAGTAGTGATTTTGTTGT..................................................................................................... 23 1 1 6.00 6 0 6 0 0 0 0
................................................................TGGAAGACTCGTGATTTTGTTG...................................................................................................... 22 1 1 6.00 6 2 2 0 1 1 0
................................................................TGGAAGACTAGTGATTTTGCTGT..................................................................................................... 23 1 1 6.00 6 0 5 0 1 0 0
..................................................................GAAGACTAGTGATTTTGT........................................................................................................ 18 0 1 6.00 6 1 0 1 0 0 4
................................................................TGGAAGACTAGTCATTTTGTTG...................................................................................................... 22 1 1 6.00 6 1 4 1 0 0 0
...................................................................AAGACTAGTGATTTTGTTGT..................................................................................................... 20 0 1 6.00 6 1 4 1 0 0 0
................................................................TGGAATACTAGTGATTTTGTTGT..................................................................................................... 23 1 1 6.00 6 2 0 0 4 0 0
................................................................TGGAAAACTAGTGATTTTGTTG...................................................................................................... 22 1 1 5.00 5 5 0 0 0 0 0
................................................................TGGAAGACGAGTGATTTTGTTA...................................................................................................... 22 2 1 5.00 5 0 0 5 0 0 0
................................................................TGGAAGACTAGGGAGTTTGTTG...................................................................................................... 22 2 1 5.00 5 2 3 0 0 0 0
................................................................TGGAAGACTAGTGATTTTGGTGT..................................................................................................... 23 1 1 5.00 5 0 4 0 0 1 0
................................................................TGGAAGACTCGTGATTTTGTTGTT.................................................................................................... 24 1 1 5.00 5 2 3 0 0 0 0
................................................................TGGAAAACTAGTGATTTTGTT....................................................................................................... 21 1 1 5.00 5 5 0 0 0 0 0
................................................................TGGAAGATTAGTGATTTTGTT....................................................................................................... 21 1 1 5.00 5 0 4 0 1 0 0
................................................................TCGAAGACTAGTGATTTTGTTGT..................................................................................................... 23 1 1 5.00 5 0 0 2 0 0 3
................................................................TGGAAGACTAGTGACTTTGTT....................................................................................................... 21 1 1 5.00 5 2 3 0 0 0 0
................................................................TGGAAGACGAGTGATTTTGTTGTTAA.................................................................................................. 26 3 1 5.00 5 0 0 5 0 0 0
................................................................TGGAAGACTAGCGATTTTGTTC...................................................................................................... 22 2 1 5.00 5 3 2 0 0 0 0
................................................................TGGAAGACTAGTGATTTTGGT....................................................................................................... 21 1 1 5.00 5 1 3 0 0 1 0
................................................................TGGAAGACTAGGGATTTTGT........................................................................................................ 20 1 1 5.00 5 0 5 0 0 0 0
................................................................TGGAAGACTAGTGATTTTGTTGTC.................................................................................................... 24 1 1 5.00 5 2 0 0 3 0 0
................................................................TGGAAGACTAGTGATTTTGTTGCT.................................................................................................... 24 1 1 5.00 5 4 0 0 1 0 0
................................................................CGGAAGACTAGTGATTTTGTT....................................................................................................... 21 1 1 5.00 5 1 2 0 1 1 0
................................................................TGGAAGACTAGTGAGTTTGTT....................................................................................................... 21 1 1 5.00 5 2 3 0 0 0 0
................................................................TGGAAGGCTAGCGATTTTGTT....................................................................................................... 21 2 1 5.00 5 3 2 0 0 0 0
................................................................TGGACGACTAGTGATTTTGTTG...................................................................................................... 22 1 1 5.00 5 0 4 0 1 0 0
................................................................TGGAAGACTAGTGATTTTGTTCC..................................................................................................... 23 2 1 5.00 5 0 0 0 5 0 0
................................................................TGGAAGACTTGTGATTTTGTT....................................................................................................... 21 1 1 5.00 5 1 3 1 0 0 0
................................................................TGGAAGACTAGTGATTCTGTT....................................................................................................... 21 1 1 5.00 5 0 3 0 2 0 0
................................................................TGGAAGACTAGTGATATTGTTG...................................................................................................... 22 1 1 5.00 5 1 2 0 1 1 0
................................................................TGGAAGACTAGTGATTTTGTTCA..................................................................................................... 23 2 1 5.00 5 0 0 0 5 0 0
................................................................TGGAAGACTAGTGATTATGTTG...................................................................................................... 22 1 1 5.00 5 1 2 1 1 0 0
................................................................TGGAAGGCTAGGGATTTTGTTG...................................................................................................... 22 2 1 5.00 5 2 3 0 0 0 0
................................................................TAGAAGACTAGTGATTTTGTTGT..................................................................................................... 23 1 1 5.00 5 3 1 1 0 0 0
................................................................TGGAAGACTAGTGATTTTATT....................................................................................................... 21 1 1 4.00 4 1 1 1 1 0 0
................................................................TGGAAGACTAGTGATTTTGATG...................................................................................................... 22 1 1 4.00 4 3 0 1 0 0 0
................................................................TGGAAGACTAATGATTTTGTTG...................................................................................................... 22 1 1 4.00 4 2 2 0 0 0 0
.....................................................................GACTAGTGATTTTGTTGTT.................................................................................................... 19 0 2 4.00 8 1 4 1 0 2 0
................................................................TGGAAGAATAGTGATTTTGTTGTT.................................................................................................... 24 1 1 4.00 4 0 3 0 0 1 0
................................................................TGGAAGACTAGTGATTGTGTTG...................................................................................................... 22 1 1 4.00 4 0 4 0 0 0 0
................................................................TGGAAGACTAGTGATTTTGTTTC..................................................................................................... 23 2 1 4.00 4 2 0 0 2 0 0
................................................................TGGAAGACTAGTGATCTTGTTGTT.................................................................................................... 24 1 1 4.00 4 1 1 2 0 0 0
................................................................TGGAAGACTAGAGATTTTGTTGT..................................................................................................... 23 1 1 4.00 4 0 4 0 0 0 0
................................................................TGGAAGACTGGTGATTTTGT........................................................................................................ 20 1 1 4.00 4 0 3 0 1 0 0
................................................................TGGAAGAATAGGGATTTTGTT....................................................................................................... 21 2 1 4.00 4 0 4 0 0 0 0
................................................................TGGAAGTCTAGGGATTTTGTTG...................................................................................................... 22 2 1 4.00 4 0 4 0 0 0 0
................................................................TGGACGACTAGTGATTTTGTTGTT.................................................................................................... 24 1 1 4.00 4 0 2 0 2 0 0
................................................................TGGAAGGCTAGCGATTTTGTTG...................................................................................................... 22 2 1 4.00 4 2 2 0 0 0 0
................................................................TGGAAGACTAGTGATTTTGATGT..................................................................................................... 23 1 1 4.00 4 1 1 1 1 0 0
................................................................TGGAAGACTAGTGATTTTGTTGTTG................................................................................................... 25 1 1 4.00 4 0 1 3 0 0 0
................................................................TGGAAGACTAGTGACTTTGT........................................................................................................ 20 1 1 4.00 4 2 2 0 0 0 0
................................................................TGGAAGAGTGGTGATTTTGTT....................................................................................................... 21 2 1 4.00 4 0 4 0 0 0 0
................................................................TAGAAGACTAGTGATTTTGT........................................................................................................ 20 1 1 4.00 4 2 1 0 1 0 0
.................................................................TGAAGACTAGTGATTTTGTT....................................................................................................... 20 1 1 4.00 4 0 0 3 0 0 1
................................................................TGGAAGACTATTGATTTTGTTGT..................................................................................................... 23 1 1 4.00 4 0 2 2 0 0 0
...............................................................GTGGAAGACTAGTGATTTTGTTGT..................................................................................................... 24 1 1 4.00 4 0 0 4 0 0 0
................................................................TCGAAGACTAGTGATTTTGTT....................................................................................................... 21 1 1 4.00 4 2 0 2 0 0 0
................................................................TGGAAGACTCGTGATTTTGTT....................................................................................................... 21 1 1 4.00 4 0 4 0 0 0 0
................................................................TGGAGGACTAGTGATTTTGT........................................................................................................ 20 1 1 4.00 4 0 1 0 3 0 0
................................................................TGGAAGACTAGTGATTTTTTGT...................................................................................................... 22 3 1 4.00 4 0 0 2 2 0 0
.........................................................................................................AATAAATCCCTTGTCTTCTTAT............................................................. 22 1 1 4.00 4 0 0 3 0 1 0
................................................................TGGATGACTAGTGATTTTGTTG...................................................................................................... 22 1 1 4.00 4 1 2 1 0 0 0
................................................................TGGGAGACTAGTGATTTTGT........................................................................................................ 20 1 1 4.00 4 1 3 0 0 0 0
................................................................TGGTAGACTAGTGATTTTGT........................................................................................................ 20 1 1 4.00 4 0 4 0 0 0 0
................................................................TGGAAGACTAGTGATTTTGTCC...................................................................................................... 22 2 1 4.00 4 1 1 0 2 0 0
................................................................TGGAAGACTAGTGCTTTTGTTGT..................................................................................................... 23 1 1 4.00 4 0 3 1 0 0 0
................................................................TGGAACACTAGTGATTTTGTTGT..................................................................................................... 23 1 1 4.00 4 3 0 0 1 0 0
................................................................TGGAGGACTAGTGATTTTGTTGTT.................................................................................................... 24 1 1 4.00 4 0 2 0 1 1 0
................................................................TGGCAGACTAGTGATTTTGTTGTT.................................................................................................... 24 1 1 4.00 4 1 3 0 0 0 0
................................................................TGGAAGACGAGGGATTTTGTTG...................................................................................................... 22 2 1 4.00 4 1 3 0 0 0 0
................................................................TGGAAGACTAGTGATTTTGTTATT.................................................................................................... 24 1 1 4.00 4 3 0 1 0 0 0
................................................................TGGAAGATTAGTGATTTTGTTGTT.................................................................................................... 24 1 1 4.00 4 0 3 0 1 0 0
................................................................TGGGAGACTAGTGATTTTGTTGTT.................................................................................................... 24 1 1 4.00 4 1 2 1 0 0 0
................................................................TGGAAGACTAGTGATTTTGTAA...................................................................................................... 22 2 1 4.00 4 1 0 2 1 0 0
................................................................TGGAAGACTAGTTATTTTGTTGTT.................................................................................................... 24 1 1 4.00 4 1 0 3 0 0 0
................................................................TGGAAGAGTAGTGATTTTGTTGTT.................................................................................................... 24 1 1 4.00 4 0 4 0 0 0 0
................................................................TGGAAGACTAGTGATTTTCTTGTT.................................................................................................... 24 1 1 4.00 4 2 0 1 1 0 0
................................................................TGGTAGACTAGTGATTTTGTT....................................................................................................... 21 1 1 4.00 4 0 4 0 0 0 0
................................................................TGGAAAACTAGTGATTTTGTTGT..................................................................................................... 23 1 1 3.00 3 2 0 1 0 0 0
................................................................TGGAAGGCTAGAGATTTTGTT....................................................................................................... 21 2 1 3.00 3 0 3 0 0 0 0
................................................................TGGCAGACTGGTGATTTTGTTG...................................................................................................... 22 2 1 3.00 3 0 2 0 0 1 0
................................................................AGGGAGACTAGTGATTTTGTTG...................................................................................................... 22 2 1 3.00 3 1 2 0 0 0 0
................................................................TGGAAGACTAGTGATTCTGTTGTT.................................................................................................... 24 1 1 3.00 3 1 2 0 0 0 0
................................................................TGGCAGACTGGTGATTTTGTT....................................................................................................... 21 2 1 3.00 3 0 3 0 0 0 0
................................................................TGGAAGACTAGTGATTTTCTTGT..................................................................................................... 23 1 1 3.00 3 0 1 1 1 0 0
................................................................TGGGAGACTAGGGATTTTGTT....................................................................................................... 21 2 1 3.00 3 1 2 0 0 0 0
................................................................TGGAAGACGAGTGATTTTGTTGTAA................................................................................................... 25 3 1 3.00 3 0 0 3 0 0 0
................................................................TGGACGACTAGTGATTTGGTTG...................................................................................................... 22 2 1 3.00 3 1 2 0 0 0 0
................................................................TGGAAGTCTAGTGATTTTGTT....................................................................................................... 21 1 1 3.00 3 0 3 0 0 0 0
................................................................TGGAAGACTAGTAATTTTGTTGT..................................................................................................... 23 1 1 3.00 3 1 2 0 0 0 0
................................................................TGGAAGACTAGTGATTTTATTGT..................................................................................................... 23 1 1 3.00 3 2 0 0 1 0 0
................................................................TGGGAGACTAGCGATTTTGTT....................................................................................................... 21 2 1 3.00 3 0 3 0 0 0 0
................................................................TGGAAGACTAGTGATCTTGT........................................................................................................ 20 1 1 3.00 3 2 1 0 0 0 0
................................................................TGGAAGACTAGTGTTTTTGTTGT..................................................................................................... 23 1 1 3.00 3 0 3 0 0 0 0
................................................................TGGAAGACGAGTGATTTTGTTGTTA................................................................................................... 25 2 1 3.00 3 0 0 3 0 0 0
.................................................................GGAAGACTAGTGATTTTGTTT...................................................................................................... 21 1 1 3.00 3 0 0 3 0 0 0
................................................................TGGAAAACTAGTGATTTTGT........................................................................................................ 20 1 1 3.00 3 2 1 0 0 0 0
................................................................TGGAAGACTAGTGATTTTGTTGTTTC.................................................................................................. 26 1 1 3.00 3 0 0 0 3 0 0
................................................................TGGAAGACAAGTGATTTTGTTA...................................................................................................... 22 2 1 3.00 3 0 0 3 0 0 0
................................................................GGGAAGACTAGTGATTTTGT........................................................................................................ 20 1 1 3.00 3 2 1 0 0 0 0
................................................................TGGAAGACTAGAGATTTTGT........................................................................................................ 20 1 1 3.00 3 1 2 0 0 0 0
................................................................TGGAAGACTAGTGATTTTGTTGTG.................................................................................................... 24 1 1 3.00 3 0 0 3 0 0 0
................................................................TGGCAGACTAGTTATTTTGTT....................................................................................................... 21 2 1 3.00 3 1 2 0 0 0 0
................................................................TGGCAGAGTAGTTATTTTGTTG...................................................................................................... 22 3 1 3.00 3 0 3 0 0 0 0
................................................................TGGAAGAATAGGGATTTTGTTG...................................................................................................... 22 2 1 3.00 3 1 2 0 0 0 0
................................................................TGGAAGACTAGTGATTTTGTTGTTAT.................................................................................................. 26 2 1 3.00 3 0 1 2 0 0 0
................................................................TGGACGACTAGTGATTTTGT........................................................................................................ 20 1 1 3.00 3 0 2 0 0 0 1
................................................................TGGAAGAATAGTGATTTTGT........................................................................................................ 20 1 1 3.00 3 0 3 0 0 0 0
................................................................TGGAAGGCTAGGGATTTTGTTGTT.................................................................................................... 24 2 1 3.00 3 0 3 0 0 0 0
................................................................TGAAAGACTAGTGATTTTGT........................................................................................................ 20 1 1 3.00 3 0 3 0 0 0 0
................................................................TGGAAGACTAGTGATTTTGTTCTT.................................................................................................... 24 1 1 3.00 3 1 2 0 0 0 0
................................................................TGGATGACTAGCGATTTTGTTG...................................................................................................... 22 2 1 3.00 3 0 2 0 0 1 0
................................................................TGGAAGACTAGTGATTTGGTT....................................................................................................... 21 1 1 3.00 3 0 3 0 0 0 0
................................................................TGGAAGACTAGTGATTTTTTG....................................................................................................... 21 2 1 3.00 3 0 0 2 1 0 0
................................................................TGGAAGACTAGGGTTTTTGTTG...................................................................................................... 22 2 1 3.00 3 1 2 0 0 0 0
................................................................TGGAAGACTAGGGATTTTGTTT...................................................................................................... 22 2 1 3.00 3 0 3 0 0 0 0
.................................................................CGAAGACTAGTGATTTTGTTG...................................................................................................... 21 1 1 3.00 3 0 0 1 2 0 0
................................................................TGGAAGACTAGCGATTTTGTTT...................................................................................................... 22 2 1 3.00 3 0 3 0 0 0 0
................................................................TGGCAGACTAGTGATTTTGT........................................................................................................ 20 1 1 3.00 3 0 2 0 0 1 0
................................................................TGGAAGACTAGTGGTTTTGTTGT..................................................................................................... 23 1 1 3.00 3 1 2 0 0 0 0
................................................................TGGAAGACTAGTGTTTTTGT........................................................................................................ 20 1 1 3.00 3 1 1 0 1 0 0
................................................................TGGAAGACTAGTAATTTTGTT....................................................................................................... 21 1 1 3.00 3 0 3 0 0 0 0
................................................................TGGAAGACGAGTGATTTTGTTTT..................................................................................................... 23 2 1 3.00 3 0 0 3 0 0 0
................................................................GGGAAGACTAGCGATTTTGTTG...................................................................................................... 22 2 1 3.00 3 2 1 0 0 0 0
................................................................TGGAAGACTAGTGATTTGTT........................................................................................................ 20 2 1 3.00 3 1 0 0 2 0 0
................................................................TCGAAGACTAGCGATTTTGTTG...................................................................................................... 22 2 1 3.00 3 1 2 0 0 0 0
................................................................TGGAACACTAGTGATTTTGTTT...................................................................................................... 22 2 1 3.00 3 0 3 0 0 0 0

Anti-sense strand reads

CGTTTAGTTTAGCGAGGTAGGTTTGATTGATTGGCTAACCGGAGAGGACCCTCACATAAGGCATACCTTCTGATCACTAAAACAACAAACCAGAGACGATTATTGTTATTTAGGGAACAGAAGAATGCCGCACGTAGACACGAGAAGTAAGATAGCTACCAATTGGTTTAATTTGCCTTGAGCTGTAA

***********************************************(((.(((((.(((((.(((((((.((.((((((((((((.(((....))))))))))..))))).)).)))))))))))).))))))))...************************************************* 		Read size # Mismatch Hit Count Total Norm Total V042

embryo

 V057

head
...TTAGTATAGCGAGGTACG....................................................................................................................................................................... 18 2 7 0.14 1 1 0
....................................................................................................TATTGTGATCTAGAGAACA..................................................................... 19 3 14 0.07 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droPer2 scaffold_4:2540045-2540232 - dpe-mir-7 Known_mirbase G-CAAATCA-----AATCGCTCCATCCA----------AAC--------------TAACTAAC--C--------GATTGGCCTCTCC--TGGGAGTGTATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTCTGCTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATCTG-TGCTCTTCATTC-------TA-------------------TCGATGG-T-----TAAC----------CAAAT-TAAACGGA-A-----------------------------------CTCGACATT
dp5 3:8655609-8655796 - dps-mir-7 Known_mirbase G-CAAATCA-----AATCGCTCCATCCA----------AAC--------------TAACTAAC--C--------GATTGGCCTCTCC--TGGGAGTGTATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTCTGCTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATCTG-TGCTCTTCATTC-------TA-------------------TCGATGG-T-----TAAC----------CAAAT-TAAACGGA-A-----------------------------------CTCGACATT
droWil2 scf2_1100000004513:3423527-3423678 - dwi-mir-7 Known_mirbase -------------------------------------------------------------------------------------------GGAATGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTAATAAAATTAACAATAAATCCCTTGTCTTCTTATGGCGTGTATTTAAAGCTCTTCATTTGTTGTTTGTTTGTTTGTTTTTTTTCTCCACAGTGC-GCATATTAAC----------A-----------------------------------------------------------
droVir3 scaffold_12823:2295118-2295306 - dvi-mir-7 Known_mirbase G------------------C-CAATCAA-------------TCAGCCAATGCCTCAAACTAAC--C--------G--TCGT-----C--TCCAAATGCTTTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTCTGCTAA---TAACAATAAATCCCTTGTCTTCTTATGGCGCGCAT-TC-TGCTCTTCATTTATAATAATT-------------------TCGGTGG-TGCCA-CAA------------AA--C---AATAA-ATAATAA-------TAACAA-TA---------------------A
droMoj3 scaffold_6496:1649984-1650149 - dmo-mir-7 Known_mirbase ----------------------------------------------------------CTAAC--C--------GTTCGTCG--T----ATCGAGTGCTTGCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTCTGCTAA---TAACAATAAATCCCTTGTCTTCTTATGGCTCGCAT-TG-AGCTCTTCATTTCAAATC--T--------------CGTTAACGGTGG-TGCCA-CAAC----------TAA--CTAAACTAA-A-----------------------------------T--AATACT
droGri2 scaffold_15245:15782171-15782348 + dgr-mir-7 Known_mirbase G-CAAATCATCATCA----ATCAATCAA----------TGCCTGAA-------ACTAACTATC--G--------GTT--------------TAAATGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGTTAA---TAACAATAAATCCCTTGTCTCCTAACGGCGCGCAT-TG-TGCTCTTCATTA-------TT--------------TCTTAACGGTGG-TGCCACTAAC----------AA------CAATGA----------------------------------------------
droAna3 scaffold_13266:4109319-4109487 - dan-mir-7 Known_mirbase G-A--------------------AT-----------------TAAA-------ACCAACTAAC--C-----------TGGGA-GTCCTGTGGAAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTTTATGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTCG--GCTCATCACTC-------TA-------------------TCGATGGAT-----TAAC----------CAA--TTAAACTGA-A-----------------------------------CT-ATTTTT
droBip1 scf7180000396427:2554373-2554561 - A----------------------------------------------------ACCAACTAAC--C--------GAT--------CC--TGGGAGTGCTCTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCACTTG--GCTCATCACTC-------TA------------------TTCGCTGG-T-----TAAC----------CAA--TTAAACTGTGTC-ACGGTTCATCCTCGCCCCCGACTCTGGCTCAATCT---CATT
droKik1 scf7180000302471:964154-964315 + -------------------CTCCATCCA----------G------------------ACTAAC--C--------GATTGGGT-CTCCT-TGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCACCTG-TGCTCTTCATTC-------TA-------------------TCGAT----------------------------TAAAACTGA-AC----------------------------T-----CTCGGCATT
droFic1 scf7180000454039:1798045-1798221 + G-------------------------------------------AC-------AATAACTAACTCC--------GATTGGCT-CTCC--TGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAT---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCTTCATTC-------TA-------------------TCGATGG-T-----TAAT-----------AA--TAA------------------------CACACAACTAAGCTTAA--GTCGGCATT
droEle1 scf7180000491201:759700-759894 + ----------------------CATCAAAACTCAACTCAACTCAAC-------AGTAACTAAC--CAAACCGGGGATTGGCT-CTCC--TGGGAGTGTATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCTTCATTC-------TG-------------------TCGAAGG-T-----TAAC----------CAA--TTAAACTAA-G-----------------------------------CTCGGCATT
droRho1 scf7180000780104:106010-106190 + A------------------CTCCATCCA----------AACTCAAT-------AATAACTAAC--C--------GATTGGCT-CTCC--TGGGAGTGTATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCATCATTC-------TA-------------------TCGAAGG-T-----TAAC----------CAA--TTAAACTAG-A-----------------------------------CTCGGCATT
droBia1 scf7180000302291:2793483-2793661 - -------------------CTCCATCCA----------AACTCAAC-------AATAACTAAC--C--------GATTGGCC-CTCC--TGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGATCTTCATTC-------TA-------------------TCGATGG-T-----TAAC----------CA---TAAAACTAA-A-----------------------------------CTCGGCATT
droTak1 scf7180000415401:123943-124136 + A------------------CTCCATCCA----------AACTCAAC-------AATAACTAAC--C--------GATTGGCT-CTCC--TGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCTTCATTC-------CA-------------------TCGATGG-T-----TAACAACTACTGGCTAA--TAAAACTAA-AC------------------------------AA--CACGGCATT
droEug1 scf7180000409474:1467516-1467685 - AGTAA--------------CTCCATCCAA---------AACTCAAC-------AATAACTAAC--C--------GATTGGCT-CTCC--TGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCACCTG-TGCTCTGCATTC-------TA-------------------ACGATGG-T-----TAAC----------CAA--TAA----------------------------------------------------
dm3 chr2R:16493528-16493708 + dme-mir-7 Known_mirbase A------------------CTCCATCCA----------AACTCGAT-------ATTAACTAAC--C--------GATTGGTC-CTCC--TGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCTTCATTC-------TA-------------------TCGATGG-T-----TAAC----------CAA--TAAAACTAA-A-----------------------------------CACGGCATT
droSim2 2r:17063085-17063265 + dsi-mir-7 Known_mirbase A------------------CTCCATCCA----------AACTCGAT-------ATTAACTAAC--C--------GATTGGTC-CTCC--TGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCTTCATTC-------TA-------------------TCGATGG-T-----TAAC----------CAA--TAAAACTAA-A-----------------------------------CACGGCATT
droSec2 scaffold_1:14047830-14048010 + dse-mir-7 Known_mirbase A------------------CTCCATCCA----------AACTCGAT-------ATTAACTAAC--C--------GATTGGTC-CTCC--TGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCTTCATTC-------TA-------------------TCGATGG-T-----TAAC----------CAA--TAAAACTAA-A-----------------------------------CACGGCATT
droYak3 2R:12702693-12702873 - dya-mir-7 Known_mirbase A------------------CTCCATACA----------AACTCGTT-------ATTAACTAAC--C--------GACTGGTC-CTCC--TGGGAGTGCATTTCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCTTCATTC-------TA-------------------TCGATGG-T-----TAAC----------CAG--TAAAACTAA-A-----------------------------------CACGGCATT
droEre2 scaffold_4845:10640145-10640325 + der-mir-7 Known_mirbase A------------------CCCCATCCA----------AACTCGTT-------ATTAACTAAC--C--------GATTGGTC-CTCC--TGGGAGTGTATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCTTCATTC-------TA-------------------TCGATGG-T-----TAAC----------CAA--TAAAACTAA-A-----------------------------------CCCGGCATT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
G-CAAATCA-----AATCGCTCCATCCA----------AAC--------------TAACTAAC--C--------GATTGGCCTCTCC--TGGGAGTGTATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTCTGCTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATCTG-TGCTCTTCATTC-------TA-------------------TCGATGG-T-----TAAC----------CAAAT-TAAACGGA-A-----------------------------------CTCGACATTSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
..........................................................................................................TGGAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................22115885.001588503441292478836283736
..........................................................................................................TGGAAGACTAGTGATTTTGTT..........................................................................................................................................................................................2115545.00554515475318702147927
..........................................................................................................TGGAAGACTAGTGATTTTGTTGT........................................................................................................................................................................................2314812.004812318161896686891447
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................2413828.0038286881275896877893
..........................................................................................................TGGAAGACTAGTGATTTTGT...........................................................................................................................................................................................2011329.00132929013379471374
...........................................................................................................GGAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................211309.0030903090000
..........................................................................................................TGGAAGACTAGTGATTTTGTTT.........................................................................................................................................................................................221196.001960163507948
..........................................................................................................TGGAAGACTAGTGATTTTGTTA.........................................................................................................................................................................................221176.00176010113122723
...........................................................................................................GGAAGACTAGTGATTTTGTTGT........................................................................................................................................................................................221161.0016101610000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTT......................................................................................................................................................................................251155.001553319163264
.....................................................................................................................................................CAATAAATCCCTTGTCTTCTTA..............................................................................................................................................221124.0012433106930
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAA.....................................................................................................................................................................................261121.0012101143004
..........................................................................................................TGGAAGACTAGTGATTTTGTTGA........................................................................................................................................................................................231116.001160582132122
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTA......................................................................................................................................................................................251111.0011118311349
..........................................................................................................TGGAAGACTAGTGATTTTG............................................................................................................................................................................................19196.00960150313812
...........................................................................................................GGAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................23182.00820810100
..........................................................................................................TGGAAGACTAGTGATTTTGTTAA........................................................................................................................................................................................23179.00790636226
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTAA......................................................................................................................................................................................25163.00630580113
..........................................................................................................TGGAAGACTAGTGATTTTGTTC.........................................................................................................................................................................................22158.005804091233
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAA....................................................................................................................................................................................27154.00540521001
...........................................................................................................GGAAGACTAGTGATTTTGTT..........................................................................................................................................................................................20153.00530530000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTC......................................................................................................................................................................................25143.00430031039
............................................................................................................GAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................20136.00363190419
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTA.......................................................................................................................................................................................24131.00310252112
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTAAA.....................................................................................................................................................................................26226.00520483001
..........................................................................................................TGGAAGACTAGTGATTTT.............................................................................................................................................................................................18123.00230607100
..........................................................................................................TGGAAGACTAGTGATTTTGTTAAA.......................................................................................................................................................................................24122.00220220000
.....................................................................................................................................................CAATAAATCCCTTGTCTTCTT...............................................................................................................................................21120.00200324110
............................................................................................................GAAGACTAGTGATTTTGTTGT........................................................................................................................................................................................21117.00171110302
..........................................................................................................TGGAAGACTAGTGATTTTGTTGC........................................................................................................................................................................................23114.0014010544
..........................................................................................................TGGAAGACTAGTGATTTTGTTGAA.......................................................................................................................................................................................24113.0013060016
...........................................................................................................GGAAGACTAGTGATTTTGTTAA........................................................................................................................................................................................22111.00110110000
............................................................................................................GAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................22111.0011630011
............................................................................................................GAAGACTAGTGATTTTGTT..........................................................................................................................................................................................19110.0010030205
......................................................................................................................................................AATAAATCCCTTGTCTTCTTA..............................................................................................................................................21110.0010145000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTTT.....................................................................................................................................................................................26110.0010000118
...........................................................................................................GGAAGACTAGTGATTTTGTTA.........................................................................................................................................................................................2119.009090000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGG........................................................................................................................................................................................2318.008161000
...........................................................................................................GGAAGACTAGTGATTTTGTTGTTAA.....................................................................................................................................................................................2518.008080000
..........................................................................................................TGGAAGACTAGTGATTTTGTC..........................................................................................................................................................................................2118.008000161
..........................................................................................................TGGAAGACTAGTGATTTTGTA..........................................................................................................................................................................................2117.007000151
...........................................................................................................GGAAGACTAGTGATTTTGTTGA........................................................................................................................................................................................2217.007070000
..........................................................................................................TGGAAGACTAGTGATTTTGC...........................................................................................................................................................................................2017.007000250
...........................................................................................................GGAAGACTAGTGATTTTGTTGTTA......................................................................................................................................................................................2417.007070000
......................................................................................................................................................AATAAATCCCTTGTCTTCTTAA.............................................................................................................................................2217.007040021
.............................................................................................................AAGACTAGTGATTTTGTTG.........................................................................................................................................................................................1916.006030030
............................................................................................................GAAGACTAGTGATTTTGT...........................................................................................................................................................................................1816.006410100
.............................................................................................................AAGACTAGTGATTTTGTTGT........................................................................................................................................................................................2016.006010140
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTC.......................................................................................................................................................................................2415.005000203
..........................................................................................................TGGAAGACTAGTGATTTTGTTCC........................................................................................................................................................................................2315.005000005
..........................................................................................................TGGAAGACTAGTGATTTTGTTCA........................................................................................................................................................................................2315.005000005
...............................................................................................................GACTAGTGATTTTGTTGTT.......................................................................................................................................................................................1924.008012140
..........................................................................................................TGGAAGACTAGTGATTTTGTTTC........................................................................................................................................................................................2314.004000202
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTG......................................................................................................................................................................................2514.004030010
......................................................................................................................................................AATAAATCCCTTGTCTTCTTAT.............................................................................................................................................2214.004031000
..........................................................................................................TGGAAGACTAGTGATTTTGTCC.........................................................................................................................................................................................2214.004000112
..........................................................................................................TGGAAGACTAGTGATTTTGTAA.........................................................................................................................................................................................2214.004020101
...........................................................................................................GGAAGACTAGTGATTTTGTTT.........................................................................................................................................................................................2113.003030000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTTC.....................................................................................................................................................................................2613.003000003
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTG.......................................................................................................................................................................................2413.003030000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAT.....................................................................................................................................................................................2613.003020010
dp5
G-CAAATCA-----AATCGCTCCATCCA----------AAC--------------TAACTAAC--C--------GATTGGCCTCTCC--TGGGAGTGTATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTCTGCTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATCTG-TGCTCTTCATTC-------TA-------------------TCGATGG-T-----TAAC----------CAAAT-TAAACGGA-A-----------------------------------CTCGACATTSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................24131339.00313390618117652114710318493571442483730
..........................................................................................................TGGAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................22129649.00296490175871065645920435393818712702684
..........................................................................................................TGGAAGACTAGTGATTTTGTTGT........................................................................................................................................................................................23116631.00166310840041106115876252962252081569
..........................................................................................................TGGAAGACTAGTGATTTTGTT..........................................................................................................................................................................................2118250.008250033605511301177193736339106416
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTC.......................................................................................................................................................................................2412509.0025090323541351220120
..........................................................................................................TGGAAGACTAGTGATTTTGT...........................................................................................................................................................................................2012087.002087079389280244251441561256
...........................................................................................................GGAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................2111531.0015310151901000083
.....................................................................................................................................................CAATAAATCCCTTGTCTTCTTA..............................................................................................................................................2211363.0013630315301776852037
..........................................................................................................TGGAAGACTAGTGATTTTGTTGC........................................................................................................................................................................................2311018.00101806847156260010
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTT......................................................................................................................................................................................251761.0076101873523540212522277
...........................................................................................................GGAAGACTAGTGATTTTGTTGT........................................................................................................................................................................................221721.00721071700010003
...........................................................................................................GGAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................231542.005420522122000015
..........................................................................................................TGGAAGACTAGTGATTTTGTTA.........................................................................................................................................................................................221495.00495035620430172215229
..........................................................................................................TGGAAGACTAGTGATTTTGTTT.........................................................................................................................................................................................221382.003820147145910763702712
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTA......................................................................................................................................................................................251380.003800238772257311413
..........................................................................................................TGGAAGACTAGTGATTTTGTTAA........................................................................................................................................................................................231352.003520316201335670
..........................................................................................................TGGAAGACTAGTGATTTTG............................................................................................................................................................................................191319.00319020571813283369
..........................................................................................................TGGAAGACTAGTGATTTTGTTGA........................................................................................................................................................................................231306.0030602214641582406
...........................................................................................................GGAAGACTAGTGATTTTGTT..........................................................................................................................................................................................201298.00298029700000001
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAA.....................................................................................................................................................................................261278.0027802349012031505
..........................................................................................................TGGAAGACTAGTGATTTTGTC..........................................................................................................................................................................................211256.002560094157120020
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTA.......................................................................................................................................................................................241195.0019506410615302032
..........................................................................................................TGGAAGACTAGTGATTTTGTTC.........................................................................................................................................................................................221166.0016607111104601270
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTAA......................................................................................................................................................................................251163.00163015800200210
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAA....................................................................................................................................................................................271158.00158015320101010
..........................................................................................................TGGAAGACTAGTGATTTTGTTAAA.......................................................................................................................................................................................241144.00144013400304210
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTAAA.....................................................................................................................................................................................261120.00120011010102600
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTC......................................................................................................................................................................................25197.00970959310100150
..........................................................................................................TGGAAGACTAGTGATTTTGC...........................................................................................................................................................................................20196.0096012767010000
......................................................................................................................................................AATAAATCCCTTGTCTTCTTA..............................................................................................................................................21188.00880173113600021
.................................................................................................................CTAGTGATTTTGTTGTT.......................................................................................................................................................................................17279.00158000000015152
............................................................................................................GAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................20178.007807701000000
.................................................................................................................CTAGTGATTTTGTTG.........................................................................................................................................................................................15271.501430000000218123
...........................................................................................................GGAAGACTAGTGATTTTGT...........................................................................................................................................................................................19171.007106900000002
................................................................................................................ACTAGTGATTTTGTTGTT.......................................................................................................................................................................................18270.50141020000014134
................................................................................................................ACTAGTGATTTTGTTG.........................................................................................................................................................................................16253.50107000000031292
.....................................................................................................................................................CAATAAATCCCTTGTCTTCTT...............................................................................................................................................21147.0047018167600000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGAA.......................................................................................................................................................................................24146.0046034000001110
............................................................................................................GAAGACTAGTGATTTTGTTGT........................................................................................................................................................................................21139.003903720000000
.................................................................................................................CTAGTGATTTTGTTGT........................................................................................................................................................................................16236.007200000001368
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTG.......................................................................................................................................................................................24133.003308240010000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGAC.......................................................................................................................................................................................24130.003000273000000
................................................................................................................ACTAGTGATTTTGTTGT........................................................................................................................................................................................17229.005800000001453
......................................................................................................................................................AATAAATCCCTTGTCTTCTTAA.............................................................................................................................................22129.00290931801061
......................................................................................................................................................AATAAATCCCTTGTCTTCTTAT.............................................................................................................................................22127.002701360511010
..........................................................................................................TGGAAGACTAGTGATTTT.............................................................................................................................................................................................18127.0027012010100112
...........................................................................................................GGAAGACTAGTGATTTTGTTA.........................................................................................................................................................................................21126.002602600000000
..............................................................................................................AGACTAGTGATTTTGTTG.........................................................................................................................................................................................18225.0050011000000930
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTTT.....................................................................................................................................................................................26124.002406121001013
............................................................................................................GAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................22124.002402310000000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGG........................................................................................................................................................................................23123.002301452110000
...........................................................................................................GGAAGACTAGTGATTTTGTTGTTA......................................................................................................................................................................................24122.002202200000000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGAAA......................................................................................................................................................................................25220.504103900000110
...........................................................................................................GGAAGACTAGTGATTTTGTTT.........................................................................................................................................................................................21120.002002000000000
...........................................................................................................GGAAGACTAGTGATTTTGTTGTTAA.....................................................................................................................................................................................25120.002002000000000
..........................................................................................................TGGAAGACTAGTGATTTTGTTCA........................................................................................................................................................................................23119.001900000010180
.........................................................................................................ATGGAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................23118.001801400000031
...........................................................................................................GGAAGACTAGTGATTTTGTTGA........................................................................................................................................................................................22118.001801800000000
...........................................................................................................GGAAGACTAGTGATTTTG............................................................................................................................................................................................18117.001701700000000
..............................................................................................................AGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................20216.503301000000131
..........................................................................................................TGGAAGACTAGTGATTTTGA...........................................................................................................................................................................................20116.001601000110121
...........................................................................................................GGAAGACTAGTGATTTTGTTGTAA......................................................................................................................................................................................24116.001601600000000
......................................................................................................................................................AATAAATCCCTTGTCTTCTT...............................................................................................................................................20116.001601020400000
..........................................................................................................TGGAAGACTAGTGATTTTGTTCC........................................................................................................................................................................................23115.001502010010110
...........................................................................................................GGAAGACTAGTGATTTTGTTGTTT......................................................................................................................................................................................24115.001501500000000
............................................................................................................GAAGACTAGTGATTTTGTT..........................................................................................................................................................................................19115.001501401000000
...........................................................................................................GGAAGACTAGTGATTTTGTTAA........................................................................................................................................................................................22114.001401400000000
.............................................................................................................AAGACTAGTGATTTTGTTG.........................................................................................................................................................................................19114.001401000020002
...............................................................................................................GACTAGTGATTTTGTTG.........................................................................................................................................................................................17213.002600000000323
.....................................................................................................................................................CAATAAATCCCTTGTCTTCT................................................................................................................................................20113.00130462010000
..........................................................................................................TGGAAGACTAGTGATTTTGTA..........................................................................................................................................................................................21112.00120314121000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTG......................................................................................................................................................................................25110.00100621010000
..........................................................................................................TGGAAGACTAGTGATT...............................................................................................................................................................................................1619.0090000000414
.........................................................................................................ATGGAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................2519.0090400000410
............................................................................................................GAAGACTAGTGATTTTGT...........................................................................................................................................................................................1818.0080800000000
.....................................................................................................................................................CAATAAATCCCTTGTCTTCTTT..............................................................................................................................................2218.0080031400000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTCC......................................................................................................................................................................................2518.0080100004030
.............................................................................................................AAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................2118.0080330000011
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAT.....................................................................................................................................................................................2617.0070520000000
......................................................................................................................................................AATAAATCCCTTGTCTTCTTAC.............................................................................................................................................2217.0070061000000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGCC.......................................................................................................................................................................................2417.0070070000000
.......................................................................................................................................................ATAAATCCCTTGTCTTCTTA..............................................................................................................................................2017.0070421000000
..............................................................................................................AGACTAGTGATTTTGTTGT........................................................................................................................................................................................1927.001402000001011
..........................................................................................................TGGAAGACTAGTGATTTTGTAAA........................................................................................................................................................................................2317.0070600001000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGGC.......................................................................................................................................................................................2417.0070160000000
...............................................................................................................GACTAGTGATTTTGTTGT........................................................................................................................................................................................1826.50130400100017
......................................................................................................................................................AATAAATCCCTTGTCTTCTTAAA............................................................................................................................................2316.0060300100020
...........................................................................................................GGAAGACTAGTGATTTTGTTGAA.......................................................................................................................................................................................2316.0060600000000
droWil2
-------------------------------------------------------------------------------------------GGAATGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTAATAAAATTAACAATAAATCCCTTGTCTTCTTATGGCGTGTATTTAAAGCTCTTCATTTGTTGTTTGTTTGTTTGTTTTTTTTCTCCACAGTGC-GCATATTAAC----------A-----------------------------------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
..........................................................................................................TGGAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................22122820.0022820562521885700612352
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................24122073.0022073532219412162333156
..........................................................................................................TGGAAGACTAGTGATTTTGTT..........................................................................................................................................................................................21112162.001216273111460616908679
..........................................................................................................TGGAAGACTAGTGATTTTGTTGT........................................................................................................................................................................................2317314.0073142890022234872677
..........................................................................................................TGGAAGACTAGTGATTTTGT...........................................................................................................................................................................................2015436.005436362652242664645
.....................................................................................................................................................CAATAAATCCCTTGTCTTCTTA..............................................................................................................................................2213332.00333261213017296
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTT......................................................................................................................................................................................2511155.00115537438813227
..........................................................................................................TGGAAGACTAGTGATTTTGTTA.........................................................................................................................................................................................221572.0057205721280214
..........................................................................................................TGGAAGACTAGTGATTTTGTTT.........................................................................................................................................................................................221364.003644193538268
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTA......................................................................................................................................................................................251359.00359059426135
..........................................................................................................TGGAAGACTAGTGATTTTGTTAA........................................................................................................................................................................................231350.00350066326516
...........................................................................................................GGAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................211225.002256216012
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAA.....................................................................................................................................................................................261206.0020604511582
...........................................................................................................GGAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................231188.001882186000
..........................................................................................................TGGAAGACTAGTGATTTTG............................................................................................................................................................................................191128.0012833616568
..........................................................................................................TGGAAGACTAGTGATTTTGTTGA........................................................................................................................................................................................231116.0011602345633
...........................................................................................................GGAAGACTAGTGATTTTGTT..........................................................................................................................................................................................201103.00103497002
.....................................................................................................................................................CAATAAATCCCTTGTCTTCTT...............................................................................................................................................21193.00930904440
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAA....................................................................................................................................................................................27190.00900340560
...........................................................................................................GGAAGACTAGTGATTTTGTTGT........................................................................................................................................................................................22183.0083082010
..........................................................................................................TGGAAGACTAGTGATTTTGTTAAA.......................................................................................................................................................................................24183.00830201611
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTC......................................................................................................................................................................................25168.00680962726
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTAA......................................................................................................................................................................................25165.00650150500
............................................................................................................GAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................20162.006230122711
............................................................................................................GAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................22158.005829140141
..........................................................................................................TGGAAGACTAGTGATTTTGTTC.........................................................................................................................................................................................22155.005501025119
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTAAA.....................................................................................................................................................................................26149.00490210280
......................................................................................................................................................AATAAATCCCTTGTCTTCTTA..............................................................................................................................................21147.0047020405
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTTT.....................................................................................................................................................................................26141.0041020318
............................................................................................................GAAGACTAGTGATTTTGTT..........................................................................................................................................................................................19140.0040257008
.............................................................................................................AAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................21137.0037920242
..............................................................................................................AGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................20133.0033330270
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTA.......................................................................................................................................................................................24133.0033050253
......................................................................................................................................................AATAAATCCCTTGTCTTCTTAT.............................................................................................................................................22131.0031030217
...........................................................................................................GGAAGACTAGTGATTTTGT...........................................................................................................................................................................................19128.0028225001
..........................................................................................................TGGAAGACTAGTGATTTTGTA..........................................................................................................................................................................................21127.0027000522
..........................................................................................................TGGAAGACTAGTGATTTT.............................................................................................................................................................................................18127.0027060318
............................................................................................................GAAGACTAGTGATTTTGTTGT........................................................................................................................................................................................21126.0026163052
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTC.......................................................................................................................................................................................24125.0025142162
..................................................................................................................................TGGTCTTTAATAAAATTAA....................................................................................................................................................................19121.0021000201
......................................................................................................................................................AATAAATCCCTTGTCTTCTTAA.............................................................................................................................................22119.0019000154
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTG......................................................................................................................................................................................25118.0018001161
.............................................................................................................AAGACTAGTGATTTTGTT..........................................................................................................................................................................................18117.0017151001
..........................................................................................................TGGAAGACTAGTGATTTTGA...........................................................................................................................................................................................20116.0016011014
.....................................................................................................................................................CAATAAATCCCTTGTCTTCT................................................................................................................................................20115.001551018
............................................................................................................GAAGACTAGTGATTTTGT...........................................................................................................................................................................................18114.0014111011
................................................................................................................ACTAGTGATTTTGTTGTT.......................................................................................................................................................................................18113.001322081
..........................................................................................................TGGAAGACTAGTGATTTTGTC..........................................................................................................................................................................................21113.001300139
.............................................................................................................AAGACTAGTGATTTTGTTG.........................................................................................................................................................................................19113.001361015
..........................................................................................................TGGAAGACTAGTGATTTTGTTGAAA......................................................................................................................................................................................25111.001107040
..........................................................................................................TGGAAGACTAGTGATTTTGTTGAA.......................................................................................................................................................................................24110.001003160
..........................................................................................................TGGAAGACTAGTGATTTTGC...........................................................................................................................................................................................20110.001031006
..........................................................................................................TGGAAGACTAGTGATTTTGTTGC........................................................................................................................................................................................23110.001011044
..............................................................................................................AGACTAGTGATTTTGTTG.........................................................................................................................................................................................1819.00911025
..........................................................................................................TGGAAGACTAGTGATTTTGTAA.........................................................................................................................................................................................2218.00801061
...........................................................................................................GGAAGACTAGTGATTTTGTTGTTT......................................................................................................................................................................................2417.00706010
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAT.....................................................................................................................................................................................2617.00701060
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAT....................................................................................................................................................................................2717.00700070
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTTA.....................................................................................................................................................................................2617.00701060
..............................................................................................................AGACTAGTGATTTTGTTGT........................................................................................................................................................................................1917.00710042
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTCC.....................................................................................................................................................................................2616.00602103
..........................................................................................................TGGAAGACTAGTGATTTTGTTCC........................................................................................................................................................................................2316.00604200
...............................................................................................................GACTAGTGATTTTGTTGTT.......................................................................................................................................................................................1916.00600051
...........................................................................................................GGAAGACTAGTGATTTTGTTGTTA......................................................................................................................................................................................2415.00504010
..........................................................................................................TGGAAGACTAGTGATTTTA............................................................................................................................................................................................1915.00500104
..........................................................................................................TGGAAGACTAGTGATTTTGTTGG........................................................................................................................................................................................2315.00501022
.......................................................................................................................................................ATAAATCCCTTGTCTTCTTA..............................................................................................................................................2015.00500050
droVir3
G------------------C-CAATCAA-------------TCAGCCAATGCCTCAAACTAAC--C--------G--TCGT-----C--TCCAAATGCTTTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTCTGCTAA---TAACAATAAATCCCTTGTCTTCTTATGGCGCGCAT-TC-TGCTCTTCATTTATAATAATT-------------------TCGGTGG-TGCCA-CAA------------AA--C---AATAA-ATAATAA-------TAACAA-TA---------------------ASizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
..........................................................................................................TGGAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................221122595.001225952112319507314136714572937332952441492433162510661678106269518306108671702638165063799490422482092775978832774804610336079221015191211113421386211105710410139271512131324103138139839661412811313825573106260313113338031585173853725602
..........................................................................................................TGGAAGACTAGTGATTTTGTTGT........................................................................................................................................................................................23177980.007798011075014462241634561040332590726691854103307434862699323075001363268723095765781788144965861322559153354398883706547203140204828292671766011613724621012915712814754385183863195315767801025892766428141510811537442253247358726306
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................24166252.00662522421276553535230495388273373622289512214218553911579829900132745184861080912113127298910891242432113012014180394322176279298111034450353143111551215241415082759118379580260385801441081439137443721673912559167991488331633203225870479470559677
..........................................................................................................TGGAAGACTAGTGATTTTGTT..........................................................................................................................................................................................21140959.00409590221035433146192393325893683632304716427851596116024531078141211514972411237267274811863771877337867118551251791251116615451056413461731574445433414814420510448804832147372148913661808101197135111626729610431097
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTC......................................................................................................................................................................................25124215.002421500228711364044511685961571213192121236311106522254758501866180168616914193060115417295849226197103289055511941434261413238358146252823941834978221242719372617312212522217191826
..........................................................................................................TGGAAGACTAGTGATTTTGTTAA........................................................................................................................................................................................23113809.001380900891418124980742361626641521412325105912831431324619181013925346018254001110100000000100003011202179730362664143500000080826928311051298
..........................................................................................................TGGAAGACTAGTGATTTTGT...........................................................................................................................................................................................2018654.00865401234562137329192255197213202662379262162334166137202023902831237663366623521623232230193234522485121915261912151634995029161530874353833754201420212578199292311
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAA.....................................................................................................................................................................................2617879.0078790021811031411136491220121301388517139931391831728702464474392384123300000011000100017110684711551015754002110468156175523629
..........................................................................................................TGGAAGACTAGTGATTTTGTTC.........................................................................................................................................................................................2217867.00786703132116305016636325132018374314353586143823374231133212714811241311904161429631303422112822151626404115191610301411618156033348289661204134928265262
..........................................................................................................TGGAAGACTAGTGATTTTGTTA.........................................................................................................................................................................................2217860.007860006715248548921976136811582842211173311161211233073881782236098318595310310417411218102351123131813110001136418087109846832926110232577138150588614
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAA....................................................................................................................................................................................2716175.006175002053010260141035800000000004111228720223052160215301354175400110100000000000000200060331063861603000000363114103395536
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTA......................................................................................................................................................................................2514787.00478700341325723813211681611620912113113311154910427028526481451143180224199108212435151477677124133000211611136414704114860031012898283274314
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTT......................................................................................................................................................................................2513643.00364300742662291227135651183227592523465238722802024601881698310237116235960283014171009952443494511417250475942369404052239431071211060003506719275876
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTAA......................................................................................................................................................................................2513614.0036140012450209078375120110000648421268571017108087168178103700000000000000000000300030166986523460000001686171217275
..........................................................................................................TGGAAGACTAGTGATTTTGTTAAA.......................................................................................................................................................................................2413236.00323600605402337136119018000000001439241033812025714161158443800000000001000000000300091355985302780000001768078211274
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTC.......................................................................................................................................................................................2412961.00296100256635977057077302205131041353643473409134310347060365871211239611012181138702442552921311495624012002829232133
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTAAA.....................................................................................................................................................................................2612902.0029020083500018011133200000000002433116392202690519011362600000000000000000000401029145755192660000001576175234277
..........................................................................................................TGGAAGACTAGTGATTTTGTTGA........................................................................................................................................................................................2312582.002582001520512418232423312715154229651422511173719638134572071538602612600000000001100000002384113165133892230000001344059146216
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTCC......................................................................................................................................................................................2512301.002301001211411710091000000001127022052049453317646109800000133134214343210351201712103014402001000001000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTA.......................................................................................................................................................................................2411753.0017530043610136557193110122312391736301113822301161503143110502223362313001323003163072651982001001263348124172
..........................................................................................................TGGAAGACTAGTGATTTTGTTT.........................................................................................................................................................................................2211514.0015140247262810604779275814503022672442253251144419293051164154641184903130111330323402126371394601015605941000000351163535
..........................................................................................................TGGAAGACTAGTGATTTTG............................................................................................................................................................................................1911049.00104900724191093193020534817393321152765571115274311353533551130010011011000100010015814151236373920000230852634
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTCC.....................................................................................................................................................................................261838.0083800185342600800000400132201200644160183671550270000062000000200412000000100534700034233200000
.....................................................................................................................................................CAATAAATCCCTTGTCTTCTTA..............................................................................................................................................221645.006450055581795620100129114633350971016104211111170266309500064441414162221010328420646001119157261410001
..........................................................................................................TGGAAGACTAGTGATTTTGTTCA........................................................................................................................................................................................231642.006420091417130036781013000000140042453596319501521513104161210001031111010001204034534639000000148101424
..........................................................................................................TGGAAGACTAGTGATTTTGTTCC........................................................................................................................................................................................231554.0055400321480700220000000013210550317578248104200007360120000000100000022001800600001110000000
......................................................................................................................................................AATAAATCCCTTGTCTTCTTAT.............................................................................................................................................221521.00521003824164300021141210733851323285035271792793138132121000000100000000000011020264638221312420102
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTCA.....................................................................................................................................................................................261458.004580012153112001320000016001238390982679272191611019002101000200000000200300332100001000121
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAT.....................................................................................................................................................................................261426.0042600112010010000100011000154161621141006201371001100001000000000000000116273430000002613143539
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTCA......................................................................................................................................................................................251353.0035300220610002286000000300122313923123201072958131010100001100000150101143351500000011914209
..........................................................................................................TGGAAGACTAGTGATTTTGTTGC........................................................................................................................................................................................231330.0033001122700115250002011002121200200132010000201001001000000000001400221831200000074233
..........................................................................................................TGGAAGACTAGTGATTTTGTTGAA.......................................................................................................................................................................................241311.0031100240110050132200000111131753637517721310000000000000000000011004258522300000094102022
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTTT.....................................................................................................................................................................................261301.00301003142217191112010220222001013118211410306710500000105388296454000425311312131100000063558
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTCT.....................................................................................................................................................................................261298.0029800164210010000000011261210100384427550200000120010152475189272100800204010000000001001
..........................................................................................................TGGAAGACTAGTGATTTTGTTGAAA......................................................................................................................................................................................251284.002840019100011021200000000001411241102402411040000000001000000000000005156641700000011352023
...........................................................................................................GGAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................211241.00241012181000000000100000000000000001000000000000000000000000000000000032300010000064
..........................................................................................................TGGAAGACTAGTGATTTTGTC..........................................................................................................................................................................................211236.002360210511332371022142104634211401521617020011030000010001000100026011500125600000010332
..........................................................................................................TGGAAGACTAGTGATTTTGTAA.........................................................................................................................................................................................221231.0023100401020303036200201301022730000103311110000000000000000000019204242411000000017431516
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTTAA....................................................................................................................................................................................271221.0022100100000101020000000000105131002016014271212100000000000000000000000020322621000000522715
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTTA.....................................................................................................................................................................................261217.0021700100000211230110000100113124180550713950001101001111000000001000122528180000009231618
......................................................................................................................................................AATAAATCCCTTGTCTTCTTA..............................................................................................................................................211200.002000016112017101201031423203045657261981823122024000000001000010000032200400010012000000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAT....................................................................................................................................................................................271193.001930000000000002000000000000042000040357500001000100100000000000000245391900000012391316
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTTAAA...................................................................................................................................................................................281192.00192003100001000100000000000004300002003140000000000000000000000000205444200000009511816
..........................................................................................................TGGAAGACTAGTGATTTT.............................................................................................................................................................................................181189.0018900604774411201011615463167335471128041320120000000000000000000011021234500000021033
...........................................................................................................GGAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................231186.00186001692000000000000000000000000000000000000000000000000000000000040200111210101010
..........................................................................................................TGGAAGACTAGTGATTTTGTCC.........................................................................................................................................................................................221180.0018000161111000700000000011900110112224933040000013000000001010000000100400330000000000101
......................................................................................................................................................AATAAATCCCTTGTCTTCTTAA.............................................................................................................................................221144.00144008200121000100301100227691212154513212321030000000000010000000000051000010501000000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTTC.....................................................................................................................................................................................261141.001410001211001110200000200001111088360100010100013472991510723000900200010100010000101
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTCCC....................................................................................................................................................................................271130.0013000201100000000000000001320131233772602000007000000000000000000000130000000000000000
..........................................................................................................TGGAAGACTAGTGATTTTGTAAA........................................................................................................................................................................................231118.001180030100001202200000000005130000020019010000000000000000000000002121191500000052479
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTG......................................................................................................................................................................................251116.001160037001056300010110000001748051340112100000000012113121000101201356400000021147
................................................................................................................ACTAGTGATTTTGTTGTT.......................................................................................................................................................................................181112.0011200311213531121800020010000200110100000000036000000000000000000002031000010001100000
..........................................................................................................TGGAAGACTAGTGATTTTGTA..........................................................................................................................................................................................211110.001100000000001112204130110302011440100111000000000000010000000004201115141300000052376
..............................................................................................................AGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................201110.001100011751111142100032530010250114000001000033000000000000000000026100100002010100000
...........................................................................................................GGAAGACTAGTGATTTTGTT..........................................................................................................................................................................................201109.00109021030000000000000000000000000000000000000000000000000000000000020000000002000000
.............................................................................................................AAGACTAGTGATTTTGTTG.........................................................................................................................................................................................191104.00104031013588153124000000110112131321213100015000000000000000000002000301002020100000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTATA....................................................................................................................................................................................27199.0099000000000000100000000000003200002005130001100000000000000000000001514160000001023812
..........................................................................................................TGGAAGACTAGTGATTTTGTTCAA.......................................................................................................................................................................................24193.0093001000000003100000000001022041218110520100000000000000000000001052129200000020456
.....................................................................................................................................................CAATAAATCCCTTGTCTTCTT...............................................................................................................................................21191.009120160000000000034022413212162643710020102000000010000000000014301001011001000000
..........................................................................................................TGGAAGACTAGTGATTTTGTTCCC.......................................................................................................................................................................................24190.00901070018000000000000008101001171051205000016000000000000000000000220200000000000000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTCAA....................................................................................................................................................................................27189.0089002000000000000000000000232199552021431001000000000000000000000005054400000000010
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTCCA.....................................................................................................................................................................................26186.008600001000000000000000300001101817526010000011000000000000000000000110000000000000000
...........................................................................................................GGAAGACTAGTGATTTTGTTGT........................................................................................................................................................................................22186.008600690000010200000000000000000000000000000000000000010000000000000020110000021123
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTCAA.....................................................................................................................................................................................26185.00850020001000000000000000000122661920041700000000000000000000010004269500000014117
............................................................................................................GAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................20184.008418150112026233400000040001011290102000002000000000000000000001100001003000700000
......................................................................................................................................................AATAAATCCCTTGTCTTCTT...............................................................................................................................................20182.0082001001231000000400023122224615511011100002000000000110000000011100100201010000000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAC....................................................................................................................................................................................27179.007900010000000000000000000000000000101310001200010000000000000000001131014000000811713
...............................................................................................................GACTAGTGATTTTGTTGT........................................................................................................................................................................................18173.007300002373210800001000010070013000000000032000000000000000000003080000000000000000
..........................................................................................................TGGAAGACTAGTGATTT..............................................................................................................................................................................................17168.00680000000000000000000000000000000000000000000001001110210006300000171116000000111221
............................................................................................................GAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................22164.006409113113020300001000010100011000000000000000000000000000010000000000165321700000
.............................................................................................................AAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................21161.006104111200304000010010100110020000010010020000000000000000100010011000471141300000
......................................................................................................................................................AATAAATCCCTTGTCTTCTTAAA............................................................................................................................................23160.006000501100000000000000000024632220402125300000000000000000000010010200000100001000
.............................................................................................................AAGACTAGTGATTTTGTTGT........................................................................................................................................................................................20158.0058001020351021300000010110101020010002200021000000000000000000001100000020200000100
..........................................................................................................TGGAAGACTAGTGATTTTGTTAG........................................................................................................................................................................................23154.0054000000100000000000000000000010000011201000000000000000000000000101455000000411610
...............................................................................................................GACTAGTGATTTTGTTGTT.......................................................................................................................................................................................19154.005400224640504000110000100300110000000000320000000000000000000040100000000000000000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTCCC.....................................................................................................................................................................................26151.0051001003000000000000003000000011144701000007000000000000000000000000000000000000000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTACA....................................................................................................................................................................................27149.0049000000000000100000000000000100000041217500000000000000000000000000032100000010011
.............................................................................................................AAGACTAGTGATTTTGTT..........................................................................................................................................................................................18147.00471601011073200020010100110000000000000010000000000000000000003000000024013500000
..........................................................................................................TGGAAGACTAGTGATTTTGC...........................................................................................................................................................................................20147.0047000220000100000010000101000000000000000000000000000000000000018200000100000000000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGG........................................................................................................................................................................................23146.00460133000001200000010020000010000000000001000002000000000001301001057200000031041
......................................................................................................................................................AATAAATCCCTTGTCTTCTTATC............................................................................................................................................23146.004600530000000000000100000010001223400000003010000000000000000000000500010003200000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTG.......................................................................................................................................................................................24142.00420011001110100000000000001101200010011000000101100011010000013011043100000020024
..............................................................................................................AGACTAGTGATTTTGTTGT........................................................................................................................................................................................19142.00420021016361600111210000020000000011100001000000000000000000002000010000010000000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAC.....................................................................................................................................................................................26142.00420000100000000000000010010012100010010100000000000010000000000000152600000011078
.................................................................................................................CTAGTGATTTTGTTGTTC......................................................................................................................................................................................18140.00400100053003000000000010000000010003000007000000000000000000000000000004073200000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTTAT....................................................................................................................................................................................27139.00390010001000001000000000000031100120320100000000010000000000000000146200000021230
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTCTC....................................................................................................................................................................................27139.003900000100000000000000100000017112300000002100001200004200000000100000000000000000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTCCT.....................................................................................................................................................................................26137.0037000001000000000000000000000171011402000000000000000010000000000000000000000000000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTAG......................................................................................................................................................................................25137.00370000000000000000000000000110100010110100000000000000000000000000094600000013232
..........................................................................................................TGGAAGACTAGTGATTTTGTTTA........................................................................................................................................................................................23137.00370000000010300100000000100011230210212100000000000000000000001001025200000000112
............................................................................................................GAAGACTAGTGATTTTGTTGT........................................................................................................................................................................................21137.00370060001260301000001000010010010000000000000000000000000000010200000103100600000
..............................................................................................................AGACTAGTGATTTTGTTG.........................................................................................................................................................................................18135.00350000131060001201010030010010212002010011000000000000000000100000000000020010000
............................................................................................................GAAGACTAGTGATTTTGTT..........................................................................................................................................................................................19135.00352990000010000000010000100000010000000000000000000000000000001000200013012100000
...........................................................................................................GGAAGACTAGTGATTTTGTTGTTC......................................................................................................................................................................................24134.0034001900000000000000000000000000000000000000000000000000000000000100000011000300000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTCCA....................................................................................................................................................................................27134.00340010000000000000000000000200692600000002000000000000000000000060000000000000000
..........................................................................................................TGGAAGACTAGTGATTTTGTTTAA.......................................................................................................................................................................................24233.0066000010001000100000000000202410012030220000000000000000000000000001515400000050122
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTTTT....................................................................................................................................................................................27133.00330001000020100000100100000010030210101100000000000010121000110400100200000011001
..........................................................................................................TGGAAGACTAGTGATTTTGTCA.........................................................................................................................................................................................22131.00310020020001001100000030000021120100000000000000000000000000000000025100000010203
......................................................................................................................................................AATAAATCCCTTGTCTTCTTATA............................................................................................................................................23131.00310000000000100000000000011131110100001210001000000000000000000009000000020130000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTAAT.....................................................................................................................................................................................26130.00300001000010000000000000000120000000203100000000000000000000000000025300000022032
............................................................................................................GAAGACTAGTGATTTTGTTGTTC......................................................................................................................................................................................23129.00290020000000000000000010000000110000000000000000000000000000000000000042163800000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTTTA....................................................................................................................................................................................27128.00280000000000000100000000000010000010241200000000000000000000010000044300000010021
...........................................................................................................GGAAGACTAGTGATTTTGT...........................................................................................................................................................................................19127.002700270000000000000000000000000000000000000000000000000000000000000000000000000000
droMoj3
----------------------------------------------------------CTAAC--C--------GTTCGTCG--T----ATCGAGTGCTTGCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTCTGCTAA---TAACAATAAATCCCTTGTCTTCTTATGGCTCGCAT-TG-AGCTCTTCATTTCAAATC--T--------------CGTTAACGGTGG-TGCCA-CAAC----------TAA--CTAAACTAA-A-----------------------------------T--AATACTSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................241135582.001355824889286959211391250211072
..........................................................................................................TGGAAGACTAGTGATTTTGTTGT........................................................................................................................................................................................23128983.0028983214392545279524278390
..........................................................................................................TGGAAGACTAGTGATTTTGTT..........................................................................................................................................................................................21118326.001832659142933299549019551375
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTC.......................................................................................................................................................................................24112176.0012176364121206766
..........................................................................................................TGGAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................22111740.00117403187981167626712379846
..........................................................................................................TGGAAGACTAGTGATTTTGT...........................................................................................................................................................................................2018617.008617262425915412286965942
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTT......................................................................................................................................................................................2517181.0071811443113761654880
..........................................................................................................TGGAAGACTAGTGATTTTGTTGC........................................................................................................................................................................................2314426.00442629113436824
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTC......................................................................................................................................................................................2511845.0018452662711121237292
.....................................................................................................................................................CAATAAATCCCTTGTCTTCTTA..............................................................................................................................................2211686.001686103460413109313
..........................................................................................................TGGAAGACTAGTGATTTTG............................................................................................................................................................................................191941.00941517121371777325
..........................................................................................................TGGAAGACTAGTGATTTTGTTA.........................................................................................................................................................................................221897.00897411139446218358
..........................................................................................................TGGAAGACTAGTGATTTTGTTAA........................................................................................................................................................................................231862.0086248914281216051
..........................................................................................................TGGAAGACTAGTGATTTTGTTT.........................................................................................................................................................................................221676.0067696920021310652
...........................................................................................................GGAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................231581.005814110001700
...........................................................................................................GGAAGACTAGTGATTTTGTT..........................................................................................................................................................................................201528.0052852600020
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTA......................................................................................................................................................................................251524.00524140555929322
..........................................................................................................TGGAAGACTAGTGATTTTGTTAAA.......................................................................................................................................................................................241400.0040032317103623
..........................................................................................................TGGAAGACTAGTGATTTTGTTC.........................................................................................................................................................................................221396.003962243131829109
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTA.......................................................................................................................................................................................241365.00365192133373
..........................................................................................................TGGAAGACTAGTGATTTTGTC..........................................................................................................................................................................................211360.0036055171426419
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTTT.....................................................................................................................................................................................261349.00349827223055
..........................................................................................................TGGAAGACTAGTGATTTTGTAA.........................................................................................................................................................................................221294.0029417355452928
...........................................................................................................GGAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................211279.0027927600030
..........................................................................................................TGGAAGACTAGTGATTTTGC...........................................................................................................................................................................................201270.00270102102552
......................................................................................................................................................AATAAATCCCTTGTCTTCTTA..............................................................................................................................................211256.002565146231459
...........................................................................................................GGAAGACTAGTGATTTTGT...........................................................................................................................................................................................191230.0023022900010
......................................................................................................................................................AATAAATCCCTTGTCTTCTTAT.............................................................................................................................................221225.0022510923037713
...........................................................................................................GGAAGACTAGTGATTTTGTTGT........................................................................................................................................................................................221200.00200169000310
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAA.....................................................................................................................................................................................261197.001971341801368
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAA....................................................................................................................................................................................271140.00140123200105
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTTC.....................................................................................................................................................................................261111.00111162037218
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTG......................................................................................................................................................................................251106.001065613892
..........................................................................................................TGGAAGACTAGTGATTTTGTTGA........................................................................................................................................................................................23192.00922811320291
..........................................................................................................TGGAAGACTAGTGATTTTGTAAA........................................................................................................................................................................................23388.002642127002223
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTG.......................................................................................................................................................................................24182.00821122760
..........................................................................................................TGGAAGACTAGTGATTTTGTA..........................................................................................................................................................................................21181.0081341187183
.....................................................................................................................................................CAATAAATCCCTTGTCTTCTT...............................................................................................................................................21175.007517528421
..........................................................................................................TGGAAGACTAGTGATTTT.............................................................................................................................................................................................18173.0073190213120
............................................................................................................GAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................22169.006921000471
......................................................................................................................................................AATAAATCCCTTGTCTTCTT...............................................................................................................................................20163.006331514211
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTAAA.....................................................................................................................................................................................26162.00625230025
......................................................................................................................................................AATAAATCCCTTGTCTTCTTAA.............................................................................................................................................22158.0058241322143
.................................................................................G--T----ATCGAGTGCTTGCCGTA...............................................................................................................................................................................................................19156.005611700380
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTAA......................................................................................................................................................................................25150.005023813132
..........................................................................................................TGGAAGACTAGTGATTTTGTTGAC.......................................................................................................................................................................................24146.00461000450
...........................................................................................................GGAAGACTAGTGATTTTGTTAA........................................................................................................................................................................................22143.00434300000
...........................................................................................................GGAAGACTAGTGATTTTGTTA.........................................................................................................................................................................................21142.00424200000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTTTT....................................................................................................................................................................................27133.00331100310
................................................................................CG--T----ATCGAGTGCTTGCCGTA...............................................................................................................................................................................................................20132.003201201190
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTTA.....................................................................................................................................................................................26130.00302000262
....................................................................................T----ATCGAGTGCTTGCCGTA...............................................................................................................................................................................................................18130.003011400150
...........................................................................................................GGAAGACTAGTGATTTTGTTAAA.......................................................................................................................................................................................23129.00292900000
...........................................................................................................GGAAGACTAGTGATTTTGTTGTTC......................................................................................................................................................................................24128.00282600020
...............................................................................................................GACTAGTGATTTTGTTGTT.......................................................................................................................................................................................19128.00284212181
...........................................................................................................GGAAGACTAGTGATTTTG............................................................................................................................................................................................18127.00272700000
..............................................................................................................AGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................20125.00258213110
..........................................................................................................TGGAAGACTAGTGATTTTGA...........................................................................................................................................................................................20124.0024708621
............................................................................................................GAAGACTAGTGATTTTGTT..........................................................................................................................................................................................19123.00231400252
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAT.....................................................................................................................................................................................26123.00233300161
...........................................................................................................GGAAGACTAGTGATTTTGTTGTC.......................................................................................................................................................................................23122.00221000210
............................................................................................................GAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................20122.00221800013
.............................................................................................................AAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................21121.00213011160
..........................................................................................................TGGAAGACTAGTGATTTTGTTGG........................................................................................................................................................................................23121.00211000200
...........................................................................................................GGAAGACTAGTGATTTTGTTGTTT......................................................................................................................................................................................24120.00201100090
droGri2
G-CAAATCATCATCA----ATCAATCAA----------TGCCTGAA-------ACTAACTATC--G--------GTT--------------TAAATGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGTTAA---TAACAATAAATCCCTTGTCTCCTAACGGCGCGCAT-TG-TGCTCTTCATTA-------TT--------------TCTTAACGGTGG-TGCCACTAAC----------AA------CAATGA----------------------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
..........................................................................................................TGGAAGACTAGTGATTTTGTT..........................................................................................................................................................................................211368.00368232136
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................241321.0032124378
..........................................................................................................TGGAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................221297.00297181116
..........................................................................................................TGGAAGACTAGTGATTTTGTTGT........................................................................................................................................................................................23189.00896029
..........................................................................................................TGGAAGACTAGTGATTTTGT...........................................................................................................................................................................................20188.00884246
...........................................................................................................GGAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................23131.0031310
...........................................................................................................GGAAGACTAGTGATTTTGTT..........................................................................................................................................................................................20121.0021210
...........................................................................................................GGAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................21119.0019190
..........................................................................................................TGGAAGACTAGTGATTTTGTTT.........................................................................................................................................................................................22114.0014104
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTT......................................................................................................................................................................................25110.001055
...........................................................................................................GGAAGACTAGTGATTTTGTTGT........................................................................................................................................................................................2215.00550
..........................................................................................................TGGAAGACTAGTGATTTTGTTA.........................................................................................................................................................................................2214.00413
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTA......................................................................................................................................................................................2513.00330
.....................................................................................................................................................CAATAAATCCCTTGTCTCCTAA..............................................................................................................................................2213.00330
..........................................................................................................TGGAAGACTAGTGATTTTG............................................................................................................................................................................................1912.00211
...........................................................................................................GGAAGACTAGTGATTTTGT...........................................................................................................................................................................................1912.00220
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTC.......................................................................................................................................................................................2412.00202
.......................................................................................................................................................ATAAATCCCTTGTCTCCTAAT.............................................................................................................................................2111.00110
.....................................................................................................................................................CAATAAATCCCTTGTCTCCTA...............................................................................................................................................2111.00110
...........................................................................................................GGAAGACTAGTGATTTTG............................................................................................................................................................................................1811.00110
......................................................................................................................................................AATAAATCCCTTGTCTCCTAA..............................................................................................................................................2111.00110
............................................................................................................GAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................2211.00110
..........................................................................................................TGGAAGACTAGTGATTTTGTAA.........................................................................................................................................................................................2211.00101
..........................................................................................................TGGAAGACTAGTGATTTTGTTGGCA......................................................................................................................................................................................2511.00110
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTG......................................................................................................................................................................................2511.00110
..........................................................................................................TGGAAGACTAGTGATTTTGTAAA........................................................................................................................................................................................2311.00110
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAA....................................................................................................................................................................................2711.00110
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAA.....................................................................................................................................................................................2611.00110
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTA.......................................................................................................................................................................................2411.00110
.............................................................................................................AAGACTAGTGATTTTGTT..........................................................................................................................................................................................1811.00110
...........................................................................................................GGAAGACTAGTGATTTTGTTA.........................................................................................................................................................................................2111.00110
......................................................................................................................................................AATAAATCCCTTGTCTCCT................................................................................................................................................1911.00110
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTAA......................................................................................................................................................................................2511.00110
.............................................................................................................AAGACTAGTGATTTTGTTG.........................................................................................................................................................................................1911.00110
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTTT.....................................................................................................................................................................................2611.00110
.........................................................................................................ATGGAAGACTAGTGATTTTGTT..........................................................................................................................................................................................2211.00110
..................................................................................................................................................TAACAATAAATCCCTTGTCTCCT................................................................................................................................................2311.00110
..........................................................................................................TGGAAGACTAGTGATTTTGTTC.........................................................................................................................................................................................2211.00101
...........................................................................................................GGAAGACTAGTGATTTTGTTGTC.......................................................................................................................................................................................2311.00110
...............................................................................................................GACTAGTGATTTTGTTGTT.......................................................................................................................................................................................1920.50110
droAna3
G-A--------------------AT-----------------TAAA-------ACCAACTAAC--C-----------TGGGA-GTCCTGTGGAAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTTTATGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTCG--GCTCATCACTC-------TA-------------------TCGATGGAT-----TAAC----------CAA--TTAAACTGA-A-----------------------------------CT-ATTTTTSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
..........................................................................................................TGGAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................22117639.0017639208013292312434141610149
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................24115179.00151792968729514382310352915
..........................................................................................................TGGAAGACTAGTGATTTTGTT..........................................................................................................................................................................................21112759.0012759125141030232710017740
..........................................................................................................TGGAAGACTAGTGATTTTGTTGT........................................................................................................................................................................................23110715.0010715130653361366366532648
..........................................................................................................TGGAAGACTAGTGATTTTGT...........................................................................................................................................................................................2016433.006433389135227747114402
..........................................................................................................TGGAAGACTAGTGATTTTGTTT.........................................................................................................................................................................................2211289.001289991229162160827
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTT......................................................................................................................................................................................2511259.0012592834401041189296
..........................................................................................................TGGAAGACTAGTGATTTTGTTGC........................................................................................................................................................................................2311177.001177311671204
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTC.......................................................................................................................................................................................241909.0090998811396
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTA......................................................................................................................................................................................251624.0062463502343616
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAA.....................................................................................................................................................................................261568.005684549721005
..........................................................................................................TGGAAGACTAGTGATTTTGTTA.........................................................................................................................................................................................221339.0033924100342415142
...........................................................................................................GGAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................231267.00267251150001
..........................................................................................................TGGAAGACTAGTGATTTTG............................................................................................................................................................................................191260.002606460633295
.....................................................................................................................................................CAATAAATCCCTTGTCTTCTTA..............................................................................................................................................221215.002153759316280
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAA....................................................................................................................................................................................271199.00199291655000
...........................................................................................................GGAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................211186.0018618230001
..........................................................................................................TGGAAGACTAGTGATTTTGTTGA........................................................................................................................................................................................231155.0015515413181167
..........................................................................................................TGGAAGACTAGTGATTTTGTTAA........................................................................................................................................................................................231151.001511578304321
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTTT.....................................................................................................................................................................................261144.001443225064536
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTC......................................................................................................................................................................................251136.001363955011922
...........................................................................................................GGAAGACTAGTGATTTTGTTGT........................................................................................................................................................................................221125.0012511490002
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTAA......................................................................................................................................................................................251124.0012491105000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTA.......................................................................................................................................................................................241120.001208966136
...........................................................................................................GGAAGACTAGTGATTTTGTT..........................................................................................................................................................................................201107.0010710510100
..........................................................................................................TGGAAGACTAGTGATTTTGTC..........................................................................................................................................................................................21192.009206305420
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAT.....................................................................................................................................................................................26184.00843782010
..........................................................................................................TGGAAGACTAGTGATTTTGTA..........................................................................................................................................................................................21166.00661012656
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTAAA.....................................................................................................................................................................................26160.006013443000
......................................................................................................................................................AATAAATCCCTTGTCTTCTTA..............................................................................................................................................21157.005725515417
.....................................................................................................................................................CAATAAATCCCTTGTCTTCTT...............................................................................................................................................21145.0045171011016
..........................................................................................................TGGAAGACTAGTGATTTT.............................................................................................................................................................................................18144.004463014021
..........................................................................................................TGGAAGACTAGTGATTTTGC...........................................................................................................................................................................................20138.00380320303
...........................................................................................................GGAAGACTAGTGATTTTGTTGTTT......................................................................................................................................................................................24135.00353500000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTG......................................................................................................................................................................................25134.003451611011
..........................................................................................................TGGAAGACTAGTGATTTTGTG..........................................................................................................................................................................................21131.00310203719
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAC.....................................................................................................................................................................................26131.00312270020
............................................................................................................GAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................20130.003017000211
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAT....................................................................................................................................................................................27130.00300290001
..........................................................................................................TGGAAGACTAGTGATTTTGTTC.........................................................................................................................................................................................22129.00293319310
............................................................................................................GAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................22125.00251920022
...........................................................................................................GGAAGACTAGTGATTTTGT...........................................................................................................................................................................................19125.00252300011
......................................................................................................................................................AATAAATCCCTTGTCTTCTT...............................................................................................................................................20121.0021841224
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTG.......................................................................................................................................................................................24121.00211050231
..........................................................................................................TGGAAGACTAGTGATTTTGTTAAA.......................................................................................................................................................................................24120.00203133001
............................................................................................................GAAGACTAGTGATTTTGTTGT........................................................................................................................................................................................21118.0018600039
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAC....................................................................................................................................................................................27118.00181170000
......................................................................................................................................................AATAAATCCCTTGTCTTCTTAA.............................................................................................................................................22117.0017322028
............................................................................................................GAAGACTAGTGATTTTGTT..........................................................................................................................................................................................19116.00165000011
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTTA.....................................................................................................................................................................................26115.0015471021
..........................................................................................................TGGAAGACTAGTGATTTTGTTGG........................................................................................................................................................................................23114.0014280103
..........................................................................................................TGGAAGACTAGTGATTTTGTAA.........................................................................................................................................................................................22114.0014020237
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTTC.....................................................................................................................................................................................26112.0012330141
..........................................................................................................TGGAAGACTAGTGATTTTGTTGAA.......................................................................................................................................................................................24112.0012241104
............................................................................................................GAAGACTAGTGATTTTGT...........................................................................................................................................................................................18112.00122000010
.............................................................................................................AAGACTAGTGATTTTGTTGT........................................................................................................................................................................................20111.0011121403
......................................................................................................................................................AATAAATCCCTTGTCTTCTTAT.............................................................................................................................................22110.0010512002
..........................................................................................................TGGAAGACTAGTGATTTTGTAT.........................................................................................................................................................................................2219.009001026
.......................................................................................................................................................ATAAATCCCTTGTCTTCTTA..............................................................................................................................................2019.009410103
.............................................................................................................AAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................2119.009520200
..........................................................................................................TGGAAGACTAGTGATTTTGTTGAC.......................................................................................................................................................................................2419.009080010
...............................................................................................................GACTAGTGATTTTGTTGT........................................................................................................................................................................................1819.009000405
..........................................................................................................TGGAAGACTAGTGATTTTGA...........................................................................................................................................................................................2019.009000504
...........................................................................................................GGAAGACTAGTGATTTTGTTGTTA......................................................................................................................................................................................2418.008710000
droBip1
A----------------------------------------------------ACCAACTAAC--C--------GAT--------CC--TGGGAGTGCTCTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCACTTG--GCTCATCACTC-------TA------------------TTCGCTGG-T-----TAAC----------CAA--TTAAACTGTGTC-ACGGTTCATCCTCGCCCCCGACTCTGGCTCAATCT---CATTSizeHit CountTotal NormTotal
No Reads
droKik1
-------------------CTCCATCCA----------G------------------ACTAAC--C--------GATTGGGT-CTCCT-TGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCACCTG-TGCTCTTCATTC-------TA-------------------TCGAT----------------------------TAAAACTGA-AC----------------------------T-----CTCGGCATTSizeHit CountTotal NormTotal
No Reads
droFic1
G-------------------------------------------AC-------AATAACTAACTCC--------GATTGGCT-CTCC--TGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAT---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCTTCATTC-------TA-------------------TCGATGG-T-----TAAT-----------AA--TAA------------------------CACACAACTAAGCTTAA--GTCGGCATTSizeHit CountTotal NormTotal
No Reads
droEle1
----------------------CATCAAAACTCAACTCAACTCAAC-------AGTAACTAAC--CAAACCGGGGATTGGCT-CTCC--TGGGAGTGTATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCTTCATTC-------TG-------------------TCGAAGG-T-----TAAC----------CAA--TTAAACTAA-G-----------------------------------CTCGGCATTSizeHit CountTotal NormTotal
No Reads
droRho1
A------------------CTCCATCCA----------AACTCAAT-------AATAACTAAC--C--------GATTGGCT-CTCC--TGGGAGTGTATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCATCATTC-------TA-------------------TCGAAGG-T-----TAAC----------CAA--TTAAACTAG-A-----------------------------------CTCGGCATTSizeHit CountTotal NormTotal
No Reads
droBia1
-------------------CTCCATCCA----------AACTCAAC-------AATAACTAAC--C--------GATTGGCC-CTCC--TGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGATCTTCATTC-------TA-------------------TCGATGG-T-----TAAC----------CA---TAAAACTAA-A-----------------------------------CTCGGCATTSizeHit CountTotal NormTotal
No Reads
droTak1
A------------------CTCCATCCA----------AACTCAAC-------AATAACTAAC--C--------GATTGGCT-CTCC--TGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCTTCATTC-------CA-------------------TCGATGG-T-----TAACAACTACTGGCTAA--TAAAACTAA-AC------------------------------AA--CACGGCATTSizeHit CountTotal NormTotal
No Reads
droEug1
AGTAA--------------CTCCATCCAA---------AACTCAAC-------AATAACTAAC--C--------GATTGGCT-CTCC--TGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCACCTG-TGCTCTGCATTC-------TA-------------------ACGATGG-T-----TAAC----------CAA--TAA----------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
A------------------CTCCATCCA----------AACTCGAT-------ATTAACTAAC--C--------GATTGGTC-CTCC--TGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCTTCATTC-------TA-------------------TCGATGG-T-----TAAC----------CAA--TAAAACTAA-A-----------------------------------CACGGCATTSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
..........................................................................................................TGGAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................221730460.0073046010101809235438348708262510271703692822017860363530180237716971801009537549934492154750789427554373476544148501121357752553630673501118152510270000000000000000021187818660956682487358181964992069484162310041845432819377289379450146119669111595573826611923459804504413409625339434853525826728398344640862023305000139400000249138713892122138657461164775843162942674176440300000140890100100361458401040948366591889828081542061277215918827166321013471616000421354412710101415259413782476488141007861603163557032261294222153992723271185854738374412039215151641599114864009815801713811183733158403381848472616996198698097117668116418171465291142132241374263286279696133492574020961226237073174822121655134621149239382207392113217396272881269275474017229228115674170118586700203111255026510389164442251027126001965022263891284155825652656650454612678148178641269283019112832193524261657440742296281
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................241712821.0071282120001671540258238422411816176330163048630399006761513211539054361404116949564855825234270319693532167809366964165071277410425173000531413296000000000000000005715444583611004990995546537646622081287815060646899945203740426333143713591965301422505402712238156732185717551733218183037632432704615721617890613216791172331148900004953120097992232533003193551619480127139683246710121073649000001547116876056804025569904355311531504848124414814846085275345690445331063266861921541296854342330371433727354928151011221992142115796261320350439981729389424172314205538148132475508634331313368522432834424061211002473122437111440003675281282438519111921737612001983537608891491914266451191058032801844115428270020092816105927938237842819712607172456536659489534364229177714654901333610791556389781492954119432426180936044814581127657493220083404158943117088150010610116591884316816424518481137025229932103500150361743345743210131082992757213581912101452949256621045645663
..........................................................................................................TGGAAGACTAGTGATTTTGTTGT........................................................................................................................................................................................231371066.0037106600001016122535131541765520750226138916012549747128122931343471236205519181209431752492281374121114468203892734152130420674704421000000000000000008795846797384677184353148160317617442043544135823326326911510716533312913018614410279635602218323245170162135872813492212811650866714414691072457120100003120111054419561758473257466304473184240233430448244101003618181592413536542403703281025073350813032814179316818427062781127589115913567863721672510719842914775410925134172561702058860140412526421173623038108316252692405020181997436810661127956105005023313177341341571184156347910642534528551891412071518237555723666102850825304915852462143811615223201693411236883253420836206315279508362981602156398699253136815571835511595986708439320290364619141284552220417161495153323857011458118001264457198153235032310761118286105910090212354105494817391453132453864839102328453
..........................................................................................................TGGAAGACTAGTGATTTTGTT..........................................................................................................................................................................................211176519.0017651900003801652090049701000645237480222313797422142380525873595213757731667666860871914722517283150805221052835000000000000000000353326134172196278292031020976704383036421319429602216134612513711332107180716182311113920935405168162314519191206000029000123110184274242401287211041116101157278144000006012270945025752032422313180126527823458951174663583811021816824450768053597700106121070621060661632972045200845246626449692186465153327569757943761803160051300018611616124350140237873591609143544691319509525358531229814816627278212010817186064494345208360747805123511620950512686851556758208607242593769340962288806210715844415367426204234592724618463053261129375438581263441181611822411507106355322483693133173221323199558
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..........................................................................................................TGGAAGACTAGTGATTTTGTTGTA.......................................................................................................................................................................................2413568.003568000010111891153030000033000000000000625121205080102811235500000000000000000000000000102112571200101204402000000002070044101045408082251501270000200000151923958744342050000000000021180900317113012018013001020301980000158220000013190300000001331113288148102630019244006308201000240001100610011210300301041280814323552815003100152119253419330203110469174142182606125170223111301402040552672937262015101
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..........................................................................................................TGGAAGACTAGTGATTTTGTC..........................................................................................................................................................................................211300.0030000001000010000100000000000000000000000100000000000001000000000000000000000000000000000000002000000000000000000000000420302212010130000000000000000000000000000000000001113030115404090151000003700000000000000000000000000000000000000000000000000030000030100000200001000200000041415030201002168818110200314111045101121000000000001310000002010
.........................................................................................................ATGGAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................251285.0028500000004300110000000000000000000000000000000000010000000000000000000000000000000017525302000010098100046000140000130020100000000100100000000000000001000010000000000000020000000000001000000100000000000000000000000000000000010000010010000110000000000000031000000010201100002052400000000304393001002000000331100000000000001001000000058
.....................................................................................................................................................CAATAAATCCCTTGTCTTCT................................................................................................................................................201284.00284000000000000000000000000000000000040000000000000000000001000000000000000000012200000000000000000000000000100000000006100000001002000000000000202001000000000000000100727010020220701950060040001000100000000000000000000001755142344200000010001101013001101100000000010222000000021024005191211000000110000002001025201001002006102002134320
droSim2
A------------------CTCCATCCA----------AACTCGAT-------ATTAACTAAC--C--------GATTGGTC-CTCC--TGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCTTCATTC-------TA-------------------TCGATGG-T-----TAAC----------CAA--TAAAACTAA-A-----------------------------------CACGGCATTSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................241310760.0031076026211104266578744031274661135743160321682453728783234030575
..........................................................................................................TGGAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................221207191.0020719121282220421221890656323524805504026459266610611475891104
..........................................................................................................TGGAAGACTAGTGATTTTGTTGT........................................................................................................................................................................................231140125.00140125134015113041031103917736878365191938423655631842111359
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAA.....................................................................................................................................................................................261135838.00135838001275002714325816574632473733254160001
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAA....................................................................................................................................................................................27161409.00614090003420015300140922243890751414152000
..........................................................................................................TGGAAGACTAGTGATTTTGTT..........................................................................................................................................................................................21142488.00424881501052463832565131091334669044290113618335122112
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTA......................................................................................................................................................................................25128514.0028514004147009608781069123450436131133000
..........................................................................................................TGGAAGACTAGTGATTTTGTTAA........................................................................................................................................................................................23114368.0014368300410031312771542528461182544000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTAA......................................................................................................................................................................................25113613.00136130004400215823506310268256931000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTAAA.....................................................................................................................................................................................2617265.0072650006700144914263046121851242000
..........................................................................................................TGGAAGACTAGTGATTTTGTTA.........................................................................................................................................................................................2216772.00677250026002115173016171010195421616000
..........................................................................................................TGGAAGACTAGTGATTTTGT...........................................................................................................................................................................................2015160.005160663347368233258476838222426931873020
..........................................................................................................TGGAAGACTAGTGATTTTG............................................................................................................................................................................................1914741.0047418034546351015815681501290294000
..........................................................................................................TGGAAGACTAGTGATTTT.............................................................................................................................................................................................1814296.0042961002464355010242024197004000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTA.......................................................................................................................................................................................2414185.004185100170010059991412707281024000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTT......................................................................................................................................................................................2513843.003843302603863151512185062875940448000
..........................................................................................................TGGAAGACTAGTGATTTTGTTAAA.......................................................................................................................................................................................2413476.0034760002200834685126862039620000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGA........................................................................................................................................................................................2311686.0016862001600334263639386284113000
..............................................................................................................AGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................2011646.00164660400114091618300000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAT.....................................................................................................................................................................................2611640.0016400006003083716083387101000
...............................................................................................................GACTAGTGATTTTGTTGT........................................................................................................................................................................................1811364.00136400000100141358000000
...............................................................................................................GACTAGTGATTTTGTTGTT.......................................................................................................................................................................................1911216.00121612100109391189100000
.................................................................................................................CTAGTGATTTTGTTGTT.......................................................................................................................................................................................171939.0093900000064724898000000
................................................................................................................ACTAGTGATTTTGTTGT........................................................................................................................................................................................171899.0089900000058119866000000
................................................................................................................ACTAGTGATTTTGTTGTT.......................................................................................................................................................................................181869.008695030008734837200000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTTAA....................................................................................................................................................................................271768.00768000100101973871810010000
.....................................................................................................................................................CAATAAATCCCTTGTCTTCTTA..............................................................................................................................................221763.0076391121342946761422490920000
..........................................................................................................TGGAAGACTAGTGATT...............................................................................................................................................................................................161569.0056900000014202251462000000
..............................................................................................................AGACTAGTGATTTTGTTGT........................................................................................................................................................................................191561.005611000000118550000000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTG......................................................................................................................................................................................251535.00535000400154148155693101000
..........................................................................................................TGGAAGACTAGTGATTTTGTTT.........................................................................................................................................................................................221519.0051919211800932444939106137000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTTAAA...................................................................................................................................................................................281498.00498000700136123184471000000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTTA.....................................................................................................................................................................................261403.0040300020010282143731000000
.............................................................................................................AAGACTAGTGATTTTGTTGT........................................................................................................................................................................................201364.0036411000111131344100000
...........................................................................................................GGAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................231363.003639022157313245591061000
.............................................................................................................AAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................211349.0034930392312293285000000
.................................................................................................................CTAGTGATTTTGTTGT........................................................................................................................................................................................161339.0033900000041514315000000
............................................................................................................GAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................221322.003221645701201181211821000000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGAA.......................................................................................................................................................................................241318.003181002005256137635002000
..........................................................................................................TGGAAGACTAGTGATTTTGTAA.........................................................................................................................................................................................221259.00259000000646585404001000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGAAA......................................................................................................................................................................................251250.002500005005141105462000000
...........................................................................................................GGAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................211235.0023540014696313240012000
..................................................................................................................TAGTGATTTTGTTGTT.......................................................................................................................................................................................162233.5046700000030514445000000
.............................................................................................................AAGACTAGTGATTTTGTTG.........................................................................................................................................................................................191221.0022120010112030193000000
..............................................................................................................AGACTAGTGATTTTGTTG.........................................................................................................................................................................................181191.0019113002211121168000000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAC.....................................................................................................................................................................................261185.00185000100384759390001000
............................................................................................................GAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................201177.00177117188116410317001000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTATA....................................................................................................................................................................................271171.00171000200383064360010000
......................................................................................................................................................AATAAATCCCTTGTCTTCTTA..............................................................................................................................................211167.0016710010141361381229124000
...............................................................................................................GACTAGTGATTTTGTTG.........................................................................................................................................................................................171162.001620000000000162000000
..........................................................................................................TGGAAGACTAGTGATTT..............................................................................................................................................................................................171157.00157000000712711120000000
.............................................................................................................AAGACTAGTGATTTTGTT..........................................................................................................................................................................................181139.001395205000001180000000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGC........................................................................................................................................................................................231138.001383012004235192014200000
...........................................................................................................GGAAGACTAGTGATTTTGTTGT........................................................................................................................................................................................221134.001344019911321331051000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAC....................................................................................................................................................................................271123.00123000100302550151001000
..........................................................................................................TGGAAGACTAGTGAT................................................................................................................................................................................................151120.00120000000311101581000000
............................................................................................................GAAGACTAGTGATTTTGTTGT........................................................................................................................................................................................211120.001207306410289215000000
.................................................................................................................CTAGTGATTTTGTTG.........................................................................................................................................................................................151119.001190000001010117000000
................................................................................................................ACTAGTGATTTTGTTG.........................................................................................................................................................................................161118.001180000000002116000000
............................................................................................................GAAGACTAGTGATTTTGTT..........................................................................................................................................................................................191117.001171010511011025000000
.....................................................................................................................................................CAATAAATCCCTTGTCTTCTT...............................................................................................................................................211114.001148201113349535101211000
..........................................................................................................TGGAAGACTAGTGATTTTGTA..........................................................................................................................................................................................211111.00111000100333626141000000
...................................................................................................................AGTGATTTTGTTGTT.......................................................................................................................................................................................154104.25417000000186812373000000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTC......................................................................................................................................................................................251104.001040003002620111624301000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAT....................................................................................................................................................................................271101.00101000300252236141000000
..........................................................................................................TGGAAGACTAGTGATTTTGTAAA........................................................................................................................................................................................231100.00100000000271833220000000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTC.......................................................................................................................................................................................24199.00993030002119171220400000
......................................................................................................................................................AATAAATCCCTTGTCTTCTTAAA............................................................................................................................................23186.0086000000171132176012000
............................................................................................................GAAGACTAGTGATTTTGT...........................................................................................................................................................................................18184.0084770000111103000000
..............................................................................................................AGACTAGTGATTTTGTT..........................................................................................................................................................................................17179.0079000000020176000000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGG........................................................................................................................................................................................23177.007713014002626016000000
...............................................................................................................GACTAGTGATTTTGTT..........................................................................................................................................................................................16174.0074000000000074000000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTACA....................................................................................................................................................................................27171.0071000000211222150010000
...........................................................................................................GGAAGACTAGTGATTTTGTT..........................................................................................................................................................................................20168.006815102432200111000000
......................................................................................................................................................AATAAATCCCTTGTCTTCTTAA.............................................................................................................................................22168.006820010013161098216000
.....................................................................................................................................................CAATAAATCCCTTGTCTTCTTACG............................................................................................................................................24165.00650000313400000000000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTGA.....................................................................................................................................................................................26164.006400000016231951000000
..................................................................................................................TAGTGATTTTGTTGT........................................................................................................................................................................................15260.0012000000023410101000000
...........................................................................................................GGAAGACTAGTGATTTTGTTGTTAA.....................................................................................................................................................................................25157.00570001900472060010000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTG.......................................................................................................................................................................................24154.0054100900889413200000
......................................................................................................................................................AATAAATCCCTTGTCTTCTTAT.............................................................................................................................................22150.00500000001057830116000
...........................................................................................................GGAAGACTAGTGATTTTGTTGTTAAA....................................................................................................................................................................................26148.0048000330004920000000
..........................................................................................................TGGAAGACTAGTGATTTTGTTTAA.......................................................................................................................................................................................24244.508900010013650190000000
..............................................................................................................AGACTAGTGATTTTGT...........................................................................................................................................................................................16143.0043000000000043000000
...........................................................................................................GGAAGACTAGTGATTTTGT...........................................................................................................................................................................................19142.0042600172800000000000
...............................................................................................................GACTAGTGATTTTGT...........................................................................................................................................................................................15139.0039000000000039000000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTCAA.....................................................................................................................................................................................26136.00360001003317120000000
................................................................................................................ACTAGTGATTTTGTT..........................................................................................................................................................................................15236.0072000000111267000000
...........................................................................................................GGAAGACTAGTGATTTTG............................................................................................................................................................................................18135.0035100162700000000000
..........................................................................................................TGGAAGACTAGTGATTTTGTTC.........................................................................................................................................................................................22135.0035000100106656100000
.....................................................................................................................................................CAATAAATCCCTTGTCTTCT................................................................................................................................................20135.0035213281400103001000
.............................................................................................................AAGACTAGTGATTTTGT...........................................................................................................................................................................................17133.0033000000000132000000
............................................................................................................GAAGACTAGTGATTTTGTTGTTAA.....................................................................................................................................................................................24130.0030000000131493000000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTGAA....................................................................................................................................................................................27130.0030000000155541000000
......................................................................................................................................................AATAAATCCCTTGTCTTCTT...............................................................................................................................................20130.003000011044464312000
............................................................................................................GAAGACTAGTGATTTTGTTGTTA......................................................................................................................................................................................23130.003010310045862000000
droSec2
A------------------CTCCATCCA----------AACTCGAT-------ATTAACTAAC--C--------GATTGGTC-CTCC--TGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCTTCATTC-------TA-------------------TCGATGG-T-----TAAC----------CAA--TAAAACTAA-A-----------------------------------CACGGCATTSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................24119428.00194288104135056204354
..........................................................................................................TGGAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................22119244.001924428231339164413438
..........................................................................................................TGGAAGACTAGTGATTTTGTTGT........................................................................................................................................................................................2317296.007296237469910863137
..........................................................................................................TGGAAGACTAGTGATTTTGTT..........................................................................................................................................................................................2115453.0054536563202024275
..........................................................................................................TGGAAGACTAGTGATTTTGT...........................................................................................................................................................................................2012631.002631131130402330
...........................................................................................................GGAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................231624.00624624000
..........................................................................................................TGGAAGACTAGTGATTTTGTTT.........................................................................................................................................................................................221529.0052971487403
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTA......................................................................................................................................................................................251509.00509332219066
.....................................................................................................................................................CAATAAATCCCTTGTCTTCTTA..............................................................................................................................................221509.00509548334113
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTT......................................................................................................................................................................................251493.004931607999155
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAA.....................................................................................................................................................................................261360.0036029433924
.....................................................................................................................................................CAATAAATCCCTTGTCTTCTT...............................................................................................................................................211281.00281372620198
...........................................................................................................GGAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................211246.00246246000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGA........................................................................................................................................................................................231200.0020027116156
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAA....................................................................................................................................................................................271190.001901661167
..........................................................................................................TGGAAGACTAGTGATTTTGTTA.........................................................................................................................................................................................221186.0018645622113
...........................................................................................................GGAAGACTAGTGATTTTGTTGT........................................................................................................................................................................................221165.00165165000
......................................................................................................................................................AATAAATCCCTTGTCTTCTTA..............................................................................................................................................211157.0015744123368
..........................................................................................................TGGAAGACTAGTGATTTTG............................................................................................................................................................................................191126.00126292194
......................................................................................................................................................AATAAATCCCTTGTCTTCTT...............................................................................................................................................20199.00992314656
...........................................................................................................GGAAGACTAGTGATTTTGTT..........................................................................................................................................................................................20156.005656000
..........................................................................................................TGGAAGACTAGTGATTTTGTTAA........................................................................................................................................................................................23156.00561911818
.....................................................................................................................................................CAATAAATCCCTTGTCTTCT................................................................................................................................................20156.005612350
..........................................................................................................TGGAAGACTAGTGATTTT.............................................................................................................................................................................................18154.005410350
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTAA......................................................................................................................................................................................25140.0040211117
............................................................................................................GAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................22139.003922197
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTA.......................................................................................................................................................................................24129.002910289
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTTT.....................................................................................................................................................................................26126.00267955
............................................................................................................GAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................20126.002661118
..............................................................................................................AGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................20125.002520158
...........................................................................................................GGAAGACTAGTGATTTTGTTGTTA......................................................................................................................................................................................24124.002424000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTC......................................................................................................................................................................................25122.00228266
...........................................................................................................GGAAGACTAGTGATTTTGTTGTTAA.....................................................................................................................................................................................25121.002121000
................................................................................................................ACTAGTGATTTTGTTGTT.......................................................................................................................................................................................18120.002000146
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTG.......................................................................................................................................................................................24119.001918001
..........................................................................................................TGGAAGACTAGTGATTTTGA...........................................................................................................................................................................................20117.001702015
.......................................................................................................................................................ATAAATCCCTTGTCTTCTTA..............................................................................................................................................20117.001713022
............................................................................................................GAAGACTAGTGATTTTGTTGT........................................................................................................................................................................................21117.00179215
......................................................................................................................................................AATAAATCCCTTGTCTTCTTAA.............................................................................................................................................22117.00176047
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTAAA.....................................................................................................................................................................................26117.001710232
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTC.......................................................................................................................................................................................24117.00173383
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAT.....................................................................................................................................................................................26116.001613120
...........................................................................................................GGAAGACTAGTGATTTTGTTGTTAAA....................................................................................................................................................................................26116.001616000
...............................................................................................................GACTAGTGATTTTGTTGT........................................................................................................................................................................................18115.001520310
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTG......................................................................................................................................................................................25114.001411012
....................................................................................TCC--TGGGAGTGCATTCCGTA...............................................................................................................................................................................................................20114.001401130
..........................................................................................................TGGAAGACTAGTGATTTTGTTGAA.......................................................................................................................................................................................24112.00122208
.............................................................................................................AAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................21112.00123036
.....................................................................................CC--TGGGAGTGCATTCCGTA...............................................................................................................................................................................................................19112.001210110
..........................................................................................................TGGAAGACTAGTGATTTTGTTGC........................................................................................................................................................................................23111.00114106
...........................................................................................................GGAAGACTAGTGATTTTGTTGTTT......................................................................................................................................................................................24111.001111000
......................................................................................................................................................AATAAATCCCTTGTCTTCTTAT.............................................................................................................................................22111.00117031
..........................................................................................................TGGAAGACTAGTGATTTTGTTC.........................................................................................................................................................................................22111.00111208
..........................................................................................................TGGAAGACTAGTGATTTTGTAA.........................................................................................................................................................................................2219.0090009
...........................................................................................................GGAAGACTAGTGATTTTGT...........................................................................................................................................................................................1919.0099000
......................................................................................................................................................AATAAATCCCTTGTCTTCT................................................................................................................................................1919.0090009
.............................................................................................................AAGACTAGTGATTTTGTTG.........................................................................................................................................................................................1919.0092007
..........................................................................................................TGGAAGACTAGTGATTTTGTTGG........................................................................................................................................................................................2319.0096021
...............................................................................................................GACTAGTGATTTTGTTGTT.......................................................................................................................................................................................1918.0081070
...........................................................................................................GGAAGACTAGTGATTTTGTTT.........................................................................................................................................................................................2118.0088000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAC.....................................................................................................................................................................................2618.0088000
............................................................................................................GAAGACTAGTGATTTTGTT..........................................................................................................................................................................................1918.0083005
..........................................................................................................TGGAAGACTAGTGATTTTGTA..........................................................................................................................................................................................2117.0071006
..........................................................................................................TGGAAGACTAGTGATTTTTG...........................................................................................................................................................................................2017.0070025
.............................................................................................................AAGACTAGTGATTTTGTTGT........................................................................................................................................................................................2016.0062103
..........................................................................................................TGGAAGACTAGTGATTTTGTTAAA.......................................................................................................................................................................................2416.0065001
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTTA.....................................................................................................................................................................................2616.0066000
..............................................................................................................AGACTAGTGATTTTGTTG.........................................................................................................................................................................................1816.0063021
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTTAA....................................................................................................................................................................................2715.0055000
.....................................................................................................................................................CAATAAATCCCTTGTCTT..................................................................................................................................................1815.0050005
...........................................................................................................GGAAGACTAGTGATTTTGTTGA........................................................................................................................................................................................2215.0055000
.....................................................................................................................................................CAATAAATCCCTTGTCTTC.................................................................................................................................................1915.0052003
............................................................................................................GAAGACTAGTGATTTTGT...........................................................................................................................................................................................1815.0051004
..........................................................................................................TGGAAGACTAGTGATTTTGTTTA........................................................................................................................................................................................2314.0042002
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTTAAA...................................................................................................................................................................................2814.0044000
..........................................................................................................TGGAAGACTAGTGATTTTGTC..........................................................................................................................................................................................2114.0040112
............................................................................................................GAAGACTAGTGATTTTGTTGTTA......................................................................................................................................................................................2314.0043100
......................................................................................................................................................AATAAATCCCTTGTCTTCTTAAA............................................................................................................................................2314.0042020
..........................................................................................................TGGAAGACTAGTGATTTTGTG..........................................................................................................................................................................................2114.0044000
.........................................................................................................ATGGAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................2314.0043001
..............................................................................................................AGACTAGTGATTTTGTTGT........................................................................................................................................................................................1914.0040202
......................................................................................C--TGGGAGTGCATTCCGTA...............................................................................................................................................................................................................1814.0041030
droYak3
A------------------CTCCATACA----------AACTCGTT-------ATTAACTAAC--C--------GACTGGTC-CTCC--TGGGAGTGCATTTCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCTTCATTC-------TA-------------------TCGATGG-T-----TAAC----------CAG--TAAAACTAA-A-----------------------------------CACGGCATTSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................241186148.00186148243826176135299950916246113223392
..........................................................................................................TGGAAGACTAGTGATTTTGTTGT........................................................................................................................................................................................23122082.0022082161310183854854311056345501534
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTC.......................................................................................................................................................................................24119452.0019452261943450100004
..........................................................................................................TGGAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................22111051.001105121157428465111466385576012105
..........................................................................................................TGGAAGACTAGTGATTTTGTT..........................................................................................................................................................................................2117001.007001266502185108100426124130021
..........................................................................................................TGGAAGACTAGTGATTTTGTTGC........................................................................................................................................................................................2313736.00373612372912100000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTT......................................................................................................................................................................................2513002.003002112226188128483500366
.....................................................................................................................................................CAATAAATCCCTTGTCTTCTTA..............................................................................................................................................2211900.00190044310887593210000
..........................................................................................................TGGAAGACTAGTGATTTTGT...........................................................................................................................................................................................2011520.00152017150324312346091550000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTA......................................................................................................................................................................................251472.00472013723766371000012
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTC......................................................................................................................................................................................251461.004610344690210000
...........................................................................................................GGAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................231422.0042213487300000000
..........................................................................................................TGGAAGACTAGTGATTTTGTTT.........................................................................................................................................................................................221386.00386129885118128170000
..........................................................................................................TGGAAGACTAGTGATTTTGTC..........................................................................................................................................................................................211322.003221131501400000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAA.....................................................................................................................................................................................261180.00180010945151020008
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTA.......................................................................................................................................................................................241180.0018001615640130000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTG.......................................................................................................................................................................................241165.0016502113811100003
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAA....................................................................................................................................................................................271141.0014101261220010000
..........................................................................................................TGGAAGACTAGTGATTTTG............................................................................................................................................................................................191139.00139225290304850000
...........................................................................................................GGAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................211137.001371132210100000
...........................................................................................................GGAAGACTAGTGATTTTGTTGT........................................................................................................................................................................................221123.001230115700000010
..........................................................................................................TGGAAGACTAGTGATTTTGTTA.........................................................................................................................................................................................221109.00109021331162990000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGAC.......................................................................................................................................................................................241107.001070010700000000
..........................................................................................................TGGAAGACTAGTGATTTTGC...........................................................................................................................................................................................20195.0095109100210000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGA........................................................................................................................................................................................23188.008815261103870000
............................................................................................................GAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................22180.008021144400010000
.....................................................................................................................................................CAATAAATCCCTTGTCTTCTT...............................................................................................................................................21170.0070055533400000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTTT.....................................................................................................................................................................................26166.00660539212200015
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAT.....................................................................................................................................................................................26164.00640119000000044
......................................................................................................................................................AATAAATCCCTTGTCTTCTTA..............................................................................................................................................21163.00630536201100000
...........................................................................................................GGAAGACTAGTGATTTTGTT..........................................................................................................................................................................................20157.0057156000000000
..............................................................................................................AGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................20147.0047065013100031
...............................................................................................................GACTAGTGATTTTGTTGTT.......................................................................................................................................................................................19146.00460611003300023
..........................................................................................................TGGAAGACTAGTGATTTTGTTAA........................................................................................................................................................................................23140.00400719101210000
......................................................................................C--TGGGAGTGCATTTCGTA...............................................................................................................................................................................................................18135.00350014192000000
............................................................................................................GAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................20134.00341711100410000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTG......................................................................................................................................................................................25126.0026032010110000
..........................................................................................................TGGAAGACTAGTGATTTTGTTC.........................................................................................................................................................................................22125.0025021501610000
......................................................................................................................................................AATAAATCCCTTGTCTTCTTAT.............................................................................................................................................22124.00240111030000000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGGC.......................................................................................................................................................................................24123.0023002300000000
.....................................................................................CC--TGGGAGTGCATTTCGTA...............................................................................................................................................................................................................19122.0022001380100000
.....................................................................................................................................................CAATAAATCCCTTGTCTTCT................................................................................................................................................20121.0021011601300000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAC.....................................................................................................................................................................................26121.0021002100000000
.............................................................................................................AAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................21120.0020331300100000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGG........................................................................................................................................................................................23119.0019111700000000
..........................................................................................................TGGAAGACTAGTGATTTTGTTGCC.......................................................................................................................................................................................24118.0018001800000000
..........................................................................................................TGGAAGACTAGTGATTTT.............................................................................................................................................................................................18117.001702308300001
droEre2
A------------------CCCCATCCA----------AACTCGTT-------ATTAACTAAC--C--------GATTGGTC-CTCC--TGGGAGTGTATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCTTCATTC-------TA-------------------TCGATGG-T-----TAAC----------CAA--TAAAACTAA-A-----------------------------------CCCGGCATTSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................24135672.00356729848692814258271745107904109
..........................................................................................................TGGAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................22134348.0034348411713334563321738245693
..........................................................................................................TGGAAGACTAGTGATTTTGTTGT........................................................................................................................................................................................23116350.001635031699571040211101582011757
..........................................................................................................TGGAAGACTAGTGATTTTGTT..........................................................................................................................................................................................21110600.00106008157611964047979886
..........................................................................................................TGGAAGACTAGTGATTTTGT...........................................................................................................................................................................................2013376.003376141132731514127930
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTT......................................................................................................................................................................................2511083.001083274103381613046359
...........................................................................................................GGAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................231816.00816811500000
..........................................................................................................TGGAAGACTAGTGATTTTGTTT.........................................................................................................................................................................................221627.0062795511538303440
.....................................................................................................................................................CAATAAATCCCTTGTCTTCTTA..............................................................................................................................................221515.0051549882205131562
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTC.......................................................................................................................................................................................241492.004923460201197
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTA......................................................................................................................................................................................251399.003992282531536920
...........................................................................................................GGAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................211321.00321320000010
..........................................................................................................TGGAAGACTAGTGATTTTGTTGC........................................................................................................................................................................................231301.0030131865001070
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAA.....................................................................................................................................................................................261285.002852505146190
...........................................................................................................GGAAGACTAGTGATTTTGTTGT........................................................................................................................................................................................221261.00261260000010
..........................................................................................................TGGAAGACTAGTGATTTTGTTGA........................................................................................................................................................................................231257.0025721218082080
..........................................................................................................TGGAAGACTAGTGATTTTGTTA.........................................................................................................................................................................................221226.00226421163131510
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAA....................................................................................................................................................................................271201.00201196000311
..........................................................................................................TGGAAGACTAGTGATTTTG............................................................................................................................................................................................191179.0017945121081040
................................................................................................................ACTAGTGATTTTGTTGTT.......................................................................................................................................................................................181124.001243000411106
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTA.......................................................................................................................................................................................24196.00962129415324
.................................................................................................................CTAGTGATTTTGTTGTT.......................................................................................................................................................................................17194.009400000094
...............................................................................................................GACTAGTGATTTTGTTGT........................................................................................................................................................................................18180.0080001022552
.....................................................................................................................................................CAATAAATCCCTTGTCTTCTT...............................................................................................................................................21171.0071193134410
.................................................................................................................CTAGTGATTTTGTTGT........................................................................................................................................................................................16171.007100000071
..............................................................................................................AGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................20166.0066303021840
.................................................................................................................CTAGTGATTTTGTTG.........................................................................................................................................................................................15165.006500000065
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTG.......................................................................................................................................................................................24163.00633190101111
...........................................................................................................GGAAGACTAGTGATTTTGTT..........................................................................................................................................................................................20162.006261000010
..........................................................................................................TGGAAGACTAGTGATTTTGTTGG........................................................................................................................................................................................23162.006241100560
............................................................................................................GAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................22159.005950210060
................................................................................................................ACTAGTGATTTTGTTGT........................................................................................................................................................................................17158.005800000058
..........................................................................................................TGGAAGACTAGTGATTTTGTTAA........................................................................................................................................................................................23156.0056350110190
............................................................................................................GAAGACTAGTGATTTTGTTG.........................................................................................................................................................................................20156.0056210104300
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTC......................................................................................................................................................................................25152.0052102612391
......................................................................................................................................................AATAAATCCCTTGTCTTCTTA..............................................................................................................................................21151.0051153294180
................................................................................................................ACTAGTGATTTTGTTG.........................................................................................................................................................................................16150.005000000050
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTAA......................................................................................................................................................................................25146.004639001240
.........................................................................................................ATGGAAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................25143.004310000240
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTAT.....................................................................................................................................................................................26142.0042101004423
............................................................................................................GAAGACTAGTGATTTTGTTGT........................................................................................................................................................................................21138.0038160105160
..........................................................................................................TGGAAGACTAGTGATTTT.............................................................................................................................................................................................18137.003751210280
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTTT.....................................................................................................................................................................................26134.003470008181
..........................................................................................................TGGAAGACTAGTGATTTTGTTC.........................................................................................................................................................................................22134.003461221220
...............................................................................................................GACTAGTGATTTTGTTGTT.......................................................................................................................................................................................19133.0033000131019
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTAAA.....................................................................................................................................................................................26132.003231000010
...........................................................................................................GGAAGACTAGTGATTTTGTTGTTT......................................................................................................................................................................................24128.002828000000
......................................................................................................................................................AATAAATCCCTTGTCTTCTTAA.............................................................................................................................................22126.002650101190
.....................................................................................................................................................CAATAAATCCCTTGTCTTCT................................................................................................................................................20125.002532103160
..........................................................................................................TGGAAGACTAGTGATTTTGTTGTTG......................................................................................................................................................................................25125.002520111200
..............................................................................................................AGACTAGTGATTTTGTTGT........................................................................................................................................................................................19125.002500001159
...........................................................................................................GGAAGACTAGTGATTTTGTTGTTAA.....................................................................................................................................................................................25124.002424000000
......................................................................................................................................................AATAAATCCCTTGTCTTCTTAT.............................................................................................................................................22123.00239107240
..........................................................................................................TGGAAGACTAGTGATTTTGTTAAA.......................................................................................................................................................................................24123.002321001010
...........................................................................................................GGAAGACTAGTGATTTTGTTGTTAAA....................................................................................................................................................................................26122.002222000000
..........................................................................................................TGGAAGACTAGTGATTTTGTC..........................................................................................................................................................................................21119.00190940060
.................................................................................................................CTAGTGATTTTGTTGTTT......................................................................................................................................................................................18117.001700001115
.............................................................................................................AAGACTAGTGATTTTGTTG.........................................................................................................................................................................................19117.001750001110
...........................................................................................................GGAAGACTAGTGATTTTGTTGTTA......................................................................................................................................................................................24117.001717000000
..............................................................................................................AGACTAGTGATTTTGTTG.........................................................................................................................................................................................18117.001710001105
...........................................................................................................GGAAGACTAGTGATTTTGTTT.........................................................................................................................................................................................21117.001717000000
...........................................................................................................GGAAGACTAGTGATTTTGT...........................................................................................................................................................................................19115.001515000000
............................................................................................................GAAGACTAGTGATTTTGTT..........................................................................................................................................................................................19114.001430001100
..........................................................................................................TGGAAGACTAGTGATTTTGTA..........................................................................................................................................................................................21113.001310100110
......................................................................................................................................................AATAAATCCCTTGTCTTCTT...............................................................................................................................................20112.00125020050
.............................................................................................................AAGACTAGTGATTTTGTTGTT.......................................................................................................................................................................................21112.00124000170
..........................................................................................................TGGAAGACTAGTGATTTTGC...........................................................................................................................................................................................20110.00100331030
.............................................................................................................AAGACTAGTGATTTTGTTGT........................................................................................................................................................................................20110.00100011080
..........................................................................................................TGGAAGACTAGTGATTTTGA...........................................................................................................................................................................................2019.0091020060

Generated: 10/20/2015 at 11:20 PM