ID:

dpe-mir-6-1

 Coordinate:

scaffold_2:8906500-8906568 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

3pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-32.8

Flybase annnotation

utr3 [utr3_minus_3615]; pre_miRNA [Dper\mir-6-1-RM]; miRNA [Dper\miR-6-1-RA]

No Repeatable elements found

mature

  1. dpe-mir-6-1  scaffold_2:8906544-8906565 +
  2. dpe-mir-6-3  scaffold_2:8906700-8906721 +
  3. dpe-mir-6-2  scaffold_2:8906841-8906862 +
star

Sense Strand Reads

CACACATGGGAAACGAAACACTCAGCGATGGAGACCACACCAGCCTTTGAAGTAGAGAGAATAGTTGCTGTGCTATATGTCCTTCGACTCTATATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGCCAAACAGCCAAGGAATCGCGTTGTGCAGTGCTTCCAGTTA

****************************************..(((((((...((((((((((((((((((((.((((((((....)))...))))).))))))))))))))))))))....))))).))..************************************** 		Read size # Mismatch Hit Count Total Norm Total M021

embryo

 V042

embryo

 M042

female body

 V111

male body		 V057

head

 V050

head
..............................................................................................TATCACAGTGGCTGTTCTTTTT..................................................... 22 0 3 146.00 438 9 0 413 15 1 0
..............................................................................................TATCACAGTGGCTGGTCTTTTT..................................................... 22 1 3 135.67 407 406 0 0 1 0 0
.......................................................AGAGAATAGTTGCTGTGCTATA............................................................................................ 22 0 1 106.00 106 1 105 0 0 0 0
..............................................................................................TATCACAGTGGCTGGTTTTTTT..................................................... 22 2 3 98.00 294 294 0 0 0 0 0
..............................................................................................TATCACAGTGGCTGGTCTTTT...................................................... 21 1 3 83.67 251 248 2 0 1 0 0
.......................................................AGAGAATAGTTGCTGTGCTAT............................................................................................. 21 0 1 53.00 53 3 45 0 2 3 0
..............................................................................................TATCACAGTGGCTGGTTTTTT...................................................... 21 2 3 25.67 77 77 0 0 0 0 0
..............................................................................................TATCACAGTGGCTGTTCTTTT...................................................... 21 0 3 25.00 75 8 0 62 5 0 0
..............................................................................................TATCACAGTGGCTGGTCTTT....................................................... 20 1 3 16.67 50 49 0 0 1 0 0
...............................................................................................ATCACAGTGGCTGTTCTTTTT..................................................... 21 0 3 14.67 44 0 0 44 0 0 0
.......................................................AGAGAATAGTTGCTGTGCTATAT........................................................................................... 23 0 1 14.00 14 0 14 0 0 0 0
..............................................................................................TATCACAGTGGCTGGTGTTTTT..................................................... 22 2 4 8.00 32 32 0 0 0 0 0
..............................................................................................TATCACAGTGGCTGTTCTTTTTG.................................................... 23 0 2 5.00 10 0 0 7 3 0 0
..............................................................................................TATCACAGTGGCTGTTCTTT....................................................... 20 0 3 5.00 15 6 0 8 1 0 0
.......................................................AGAGAATAGTTGCTGTGCTA.............................................................................................. 20 0 1 5.00 5 2 3 0 0 0 0
..............................................................................................TATCACAGGGGCTGTTCTTTTT..................................................... 22 1 3 4.67 14 0 0 14 0 0 0
..............................................................................................TATCACATTGGCTGGTCTTTTT..................................................... 22 2 3 3.67 11 11 0 0 0 0 0
..............................................................................................TATCACAGTGGCTGGGTTTTTT..................................................... 22 3 4 3.50 14 12 1 0 0 1 0
........................................................GAGAATAGTTGCTGTGCTAT............................................................................................. 20 0 1 3.00 3 0 3 0 0 0 0
...............................................................................................ATCACAGTGGCTGTTCTTTT...................................................... 20 0 3 3.00 9 0 0 9 0 0 0
..............................................................................................TATCACAGTGGCTGGTTTTT....................................................... 20 2 3 2.67 8 8 0 0 0 0 0
..............................................................................................TATCACAGTGACTGTTCTTTTT..................................................... 22 1 3 2.67 8 2 5 0 0 1 0
..............................................................................................TATCACAGTGGCTGGGCTTTTT..................................................... 22 2 3 2.67 8 8 0 0 0 0 0
..............................................................................................TATCACAGAGGCTGTTCTTTTT..................................................... 22 1 3 2.67 8 0 0 8 0 0 0
........................................................GAGAATAGTTGCTGTGCTATAT........................................................................................... 22 0 1 2.00 2 0 2 0 0 0 0
..............................................................................................TATCACAGTGGCTGGTCTTTTTTT................................................... 24 2 2 2.00 4 4 0 0 0 0 0
..............................................................................................TATCACAGTGGCTGTTCTTTTTGT................................................... 24 0 1 2.00 2 0 0 2 0 0 0
.......................................................AGAGAATAGTTGCTGTACTATA............................................................................................ 22 1 1 2.00 2 0 2 0 0 0 0
..............................................................................................TATCACAGTGGCTTTTCTTTTTG.................................................... 23 1 2 2.00 4 4 0 0 0 0 0
.......................................................AGAGAATAGTTGCTGTGCTTTT............................................................................................ 22 2 1 2.00 2 0 2 0 0 0 0
..............................................................................................TATCACAGTGGCTGTTTTTTTT..................................................... 22 1 3 1.67 5 3 0 0 2 0 0
..............................................................................................TATCACAGTGGCTGGTCTT........................................................ 19 1 3 1.67 5 4 1 0 0 0 0
..............................................................................................TATCACAGTGGCTGGTGTTTT...................................................... 21 2 4 1.50 6 4 1 0 0 1 0
..............................................................................................TATCACAGCGGCTGTTCTTTTT..................................................... 22 1 3 1.33 4 0 0 4 0 0 0
..............................................................................................TATCACAGTAGCTGTTCTTTTT..................................................... 22 1 3 1.33 4 0 4 0 0 0 0
.......................................................AGAGAATAGGTGCTGTGCTATA............................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0
.......................................................AGAGAATAGTTGCTGTGCTCT............................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0
.......................................................AGAGAATAGTTGCTGTGCTAG............................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................TATCACAGGGGCTGTTCTTTT...................................................... 21 1 3 1.00 3 0 0 3 0 0 0
.......................................................AGAGAACAGTTGCTGTGCTATA............................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0
.......................................................AGAGAATAGCTGCTGAGCTAT............................................................................................. 21 2 1 1.00 1 0 1 0 0 0 0
.......................................................AGAGAATAGGTGCTGTGCTATAT........................................................................................... 23 1 1 1.00 1 0 0 0 0 1 0
..............................................................................................TATCACAGTGGCTGTTCTT........................................................ 19 0 3 1.00 3 0 0 3 0 0 0
.......................................................AGAGAATAGTTGCTGTGATAT............................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0
.......................................................AGAGGATAGTTGCTGTGCTATA............................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0
..............................................................................................TATCACAGTGGCTGGTCTTTTTCTC.................................................. 25 3 1 1.00 1 1 0 0 0 0 0
..............................................................................................TATCACAGTGGCTGGTCT......................................................... 18 1 3 1.00 3 3 0 0 0 0 0
.......................................................AGAGAATAGTTGCTGTGCTCTA............................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0
.......................................................AGAGAATAGTTGCTGTGCTAGA............................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0
.......................................................AGAGAATAGTTGCTTTGCTTT............................................................................................. 21 2 1 1.00 1 0 1 0 0 0 0
..............................................................................................TATCACATTGGCTGTTCTTTTT..................................................... 22 1 3 1.00 3 2 0 1 0 0 0
.......................................................AGAGAATAGTTGCTGTGCCATT............................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0
.......................................................AGAGAATAGTTGCTGTGCTATT............................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0
..............................................................................................TATCACAGTGGCTGGTTTTTTTTT................................................... 24 3 3 1.00 3 3 0 0 0 0 0
.........................................................AGAATAGTTGCTGTGATATAC........................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0
.......................................................AGAGAATAGTCGCTGTGCTATA............................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0
.......................................................AGAGAATAGTTGCTGTGCTT.............................................................................................. 20 1 1 1.00 1 0 1 0 0 0 0
.......................................................AGAGTATAGCTGCTGTGCGAT............................................................................................. 21 3 1 1.00 1 0 1 0 0 0 0
.......................................................AGAGAATAGTTGCTGTGCTACA............................................................................................ 22 1 1 1.00 1 0 0 0 0 0 1
.......................................................AGAGAATAGTTGCTGCGCTCT............................................................................................. 21 2 1 1.00 1 0 1 0 0 0 0
..............................................................................................TATCACAGTTGCTGTTCTTTTT..................................................... 22 1 3 1.00 3 0 1 2 0 0 0
.......................................................AGAGAATAGTTGCTGTGGTA.............................................................................................. 20 1 1 1.00 1 0 1 0 0 0 0
.......................................................AGAGAATAGTTGCTGTGCTATATC.......................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0
.......................................................AGAGAATAGTTGCTGTGCTTTA............................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0
.......................................................AGAGAATAGTTGCTGGGCTTTAT........................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0
...............................................................................................ATCACAGTGGCTGTTCTTTTTG.................................................... 22 0 2 1.00 2 0 0 2 0 0 0
..............................................................................................TATCACAGCGGCTGTTCTTTT...................................................... 21 1 3 1.00 3 0 0 3 0 0 0
..............................................................................................GATCACAGTGGCTGTTCTTTTT..................................................... 22 1 3 1.00 3 0 0 3 0 0 0
.......................................................AGAGAATAGTTGATGTGCTATA............................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0
..............................................................................................TATCACAGTAGCTGTTCTTTT...................................................... 21 1 3 0.67 2 0 1 0 0 1 0
..............................................................................................TATCACAGTGGCTGGTCTTTTTC.................................................... 23 2 3 0.67 2 2 0 0 0 0 0
................................................................................................TCACAGTGGCTGTTCTTTTT..................................................... 20 0 3 0.67 2 0 0 2 0 0 0
..............................................................................................TATCACAGTGCCTGTTCTTTTT..................................................... 22 1 3 0.67 2 0 2 0 0 0 0
..............................................................................................TATCACAGTGGCTGGTATTTTT..................................................... 22 2 3 0.67 2 2 0 0 0 0 0
.............................................................................................ATATCACAGTGGCTGGTCTTTT...................................................... 22 1 3 0.67 2 2 0 0 0 0 0
..............................................................................................TATCACAGTGGCCGTTCTTTTT..................................................... 22 1 3 0.67 2 2 0 0 0 0 0
..............................................................................................TATCACAGTGGCTGGTCGTTTTTT................................................... 24 3 2 0.50 1 0 1 0 0 0 0
................................................................................................TCACAGTGGCTGTTCTTTTTGA................................................... 22 1 2 0.50 1 0 0 1 0 0 0
...............................................................................................ATCACAGTGGCTGGTCTTTTTG.................................................... 22 1 2 0.50 1 1 0 0 0 0 0
.......................................................AGAGTATAGTTGCTGCGTTATA............................................................................................ 22 3 2 0.50 1 0 1 0 0 0 0
..............................................................................................TATCACAGTGGCTGGTCTTTTTG.................................................... 23 1 2 0.50 1 1 0 0 0 0 0
..............................................................................................TATCACAGTGGCTAATCTTTTT..................................................... 22 2 4 0.50 2 0 2 0 0 0 0
.......................................................AGAGAAGAGTTGATGTGCTATT............................................................................................ 22 3 2 0.50 1 0 1 0 0 0 0
.........................................................................................................................................CAAGGGATCGCGTGGTGC.............. 18 2 2 0.50 1 0 0 0 0 1 0
..............................................................................................TATCACAGTGGCTGGTGTTTTTTT................................................... 24 3 2 0.50 1 0 1 0 0 0 0
.............................................................................................CTATCACAGTGGCTGGTCTT........................................................ 20 2 4 0.50 2 2 0 0 0 0 0
..............................................................................................TATCACAGTGGCTGGTAGTTTT..................................................... 22 3 3 0.33 1 0 1 0 0 0 0
..............................................................................................TATCACAGTGGCCGGTCTTTTT..................................................... 22 2 3 0.33 1 0 1 0 0 0 0
.....................................................................................................................................CAGCCAAGGGATCCCGTGGTG............... 21 3 3 0.33 1 0 0 0 0 1 0
..............................................................................................TATCACAGTGACTGTTCTTTT...................................................... 21 1 3 0.33 1 1 0 0 0 0 0
...............................................................................................ATCACAGTCGCTGTTCTTTTT..................................................... 21 1 3 0.33 1 0 0 1 0 0 0
.............................................................................................ATATCACAGTGGCTGGTTTTTTT..................................................... 23 2 3 0.33 1 1 0 0 0 0 0
................................................................................................TCACAGTGGCTGTTCTTTT...................................................... 19 0 3 0.33 1 0 0 1 0 0 0
..............................................................................................TATCACAGTGGCTGTTCTTTTA..................................................... 22 1 3 0.33 1 0 0 1 0 0 0
.............................................................................................ATATCACAGTGGCTGTTCTTTT...................................................... 22 0 3 0.33 1 0 0 1 0 0 0
..............................................................................................TATCACAGAGGCTGTTCTTTT...................................................... 21 1 3 0.33 1 0 0 1 0 0 0
..............................................................................................TATCACATTGACTGTTCTTTTT..................................................... 22 2 3 0.33 1 1 0 0 0 0 0
.......................................................AGAGAAAAGTTGCTTTGCTTTA............................................................................................ 22 3 3 0.33 1 0 1 0 0 0 0
..............................................................................................TATCACAGTGTCTGTTCTTGCT..................................................... 22 3 3 0.33 1 0 1 0 0 0 0
.............................................................................................ATATCACAGTGGCTGGTTTTTT...................................................... 22 2 3 0.33 1 1 0 0 0 0 0
..............................................................................................TATCACAGGGGCTGTTCTTT....................................................... 20 1 3 0.33 1 0 0 1 0 0 0
..............................................................................................TATCACAGTCGGTGTTCTGTTT..................................................... 22 3 3 0.33 1 0 0 0 0 1 0
..............................................................................................TATCACAGTGGCTTTTCTTTTT..................................................... 22 1 3 0.33 1 1 0 0 0 0 0
..............................................................................................TATAACAGTGGCTGGCCTTTTT..................................................... 22 3 3 0.33 1 0 1 0 0 0 0
...............................................................................................ATCACAGTGGCTGGTCTTTTT..................................................... 21 1 3 0.33 1 1 0 0 0 0 0
..............................................................................................TATCACAGCGGCTGTTCTTT....................................................... 20 1 3 0.33 1 0 0 1 0 0 0
..............................................................................................TATCACAGTGGCTTTTCT......................................................... 18 1 3 0.33 1 1 0 0 0 0 0
..............................................................................................TATCACAGTGGCCGTTCTTTT...................................................... 21 1 3 0.33 1 1 0 0 0 0 0
..............................................................................................TACCACAGTGGCTGGTCTTTTT..................................................... 22 2 3 0.33 1 1 0 0 0 0 0
...............................................................................................ATAACAGTGGCTGTTCTTTTT..................................................... 21 1 3 0.33 1 0 0 1 0 0 0
..............................................................................................TATCACAGTGGCTGTTCTTTTG..................................................... 22 1 3 0.33 1 0 0 1 0 0 0
..............................................................................................TATCACATTGGCTGTTCTTTT...................................................... 21 1 3 0.33 1 1 0 0 0 0 0
..............................................................................................TATCACAGTGGCTTTTCTT........................................................ 19 1 3 0.33 1 1 0 0 0 0 0
..............................................................................................TATCACGGTGGCTGTTCTTTT...................................................... 21 1 3 0.33 1 0 1 0 0 0 0
..............................................................................................TATCACAGTGGCTGGTCGTTTT..................................................... 22 2 3 0.33 1 0 1 0 0 0 0
............................................................................................GTTATCACAGTGGCTGTTCTTTTT..................................................... 24 2 3 0.33 1 0 0 1 0 0 0
..............................................................................................TATCACAGTGCCTGGTCTTT....................................................... 20 2 3 0.33 1 0 0 0 0 1 0
..............................................................................................TATCACAGGGGCTGTTCTTTTG..................................................... 22 2 3 0.33 1 0 0 1 0 0 0
..............................................................................................TATCACAGTGGCTGTTCTTTTTA.................................................... 23 1 3 0.33 1 0 0 1 0 0 0
..............................................................................................TATCACAGTGGCTGGGCTTT....................................................... 20 2 3 0.33 1 0 1 0 0 0 0
.................................................................................................CACAGTGGCTGTTCTTTTT..................................................... 19 0 3 0.33 1 0 0 1 0 0 0
..............................................................................................TATCACAGTGGCTGTTCTTC....................................................... 20 1 3 0.33 1 1 0 0 0 0 0
..............................................................................................TATCACGGTGGCTGTTCTTT....................................................... 20 1 3 0.33 1 0 1 0 0 0 0
..............................................................................................CATCACAGTGGTAGTTCTTTT...................................................... 21 3 3 0.33 1 0 0 0 0 1 0
..............................................................................................TATCACGGTGGCTGGTCTTTTT..................................................... 22 2 3 0.33 1 0 1 0 0 0 0
..............................................................................................TATCGCAGTGGCTGGTCTTTTT..................................................... 22 2 3 0.33 1 1 0 0 0 0 0
..............................................................................................TATCACAGTGGCTGGTATTTT...................................................... 21 2 3 0.33 1 1 0 0 0 0 0
..............................................................................................TACCACAGTGGCTGTTCTTTTT..................................................... 22 1 3 0.33 1 0 0 1 0 0 0
..............................................................................................TATCACAGTGGCTGAGCTTTTT..................................................... 22 2 4 0.25 1 0 0 0 0 1 0
..............................................................................................TATCACAGTGGCTGGGATTTTT..................................................... 22 3 4 0.25 1 0 1 0 0 0 0
..............................................................................................TATCACAGTGGCTGGTGTTT....................................................... 20 2 4 0.25 1 1 0 0 0 0 0
..............................................................................................TATCACAGCGGCTGGTCTTT....................................................... 20 2 4 0.25 1 1 0 0 0 0 0
..............................................................................................TATCACATTGGCTGTTTTTTTT..................................................... 22 2 4 0.25 1 1 0 0 0 0 0
..............................................................................................TATCACAGTGGCTGGGTTTTT...................................................... 21 3 8 0.25 2 2 0 0 0 0 0
..............................................................................................TATCACAGTGGCTGGGCTGTT...................................................... 21 3 4 0.25 1 0 1 0 0 0 0
..............................................................................................TATCACAGCGGCTGGTCTTTT...................................................... 21 2 4 0.25 1 1 0 0 0 0 0
..............................................................................................TATCACAGTGGCTGGTCCT........................................................ 19 2 5 0.20 1 0 1 0 0 0 0
..............................................................................................TATCATAGTGGCTGGTTTTTTT..................................................... 22 3 5 0.20 1 1 0 0 0 0 0
..............................................................................................TATCACAGTGGCTGGTGCTTTT..................................................... 22 3 5 0.20 1 0 1 0 0 0 0
....................................................................................................................................ACAGCCTAGGGATCGCGGT.................. 19 3 5 0.20 1 0 0 0 0 1 0
..............................................................................................TATCACAGTGGCTGGTGTT........................................................ 19 2 6 0.17 1 0 1 0 0 0 0
..............................................................................................TATCACAGTGGCTGTGCTGTG...................................................... 21 3 8 0.13 1 0 0 0 0 1 0
..............................................................................................TAGCACAGTGTGTGTTCTTTTT..................................................... 22 3 8 0.13 1 0 0 0 0 1 0
.............................................................................................ATATCACAGTCTCAGTTCTTT....................................................... 21 3 8 0.13 1 0 0 0 0 1 0
..............................................................................................TAGCACTGTGGTTGTTCTTTTT..................................................... 22 3 9 0.11 1 0 0 0 0 1 0
..............................................................................................TATCACAGTGGCTGGTGGTT....................................................... 20 3 13 0.08 1 0 1 0 0 0 0

Anti-sense strand reads

GTGTGTACCCTTTGCTTTGTGAGTCGCTACCTCTGGTGTGGTCGGAAACTTCATCTCTCTTATCAACGACACGATATACAGGAAGCTGAGATATATAGTGTCACCGACAAGAAAAACATGGATTTCACGGTTTGTCGGTTCCTTAGCGCAACACGTCACGAAGGTCAAT

**************************************..(((((((...((((((((((((((((((((.((((((((....)))...))))).))))))))))))))))))))....))))).))..**************************************** 		Read size # Mismatch Hit Count Total Norm Total

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droPer2 scaffold_2:8906450-8906618 + dpe-mir-6-1 Known_mirbase --CACAC-ATGGGAAACGAAA---CACTCAGCGATG--------------------------------G------------------------------AGA--------CCACACCAGCCTTTGAAGTAGAGAGAATAGTTGCTGTGCTATATGTCCTTCG-AC--TCTATATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CAAACAGCCAAGG-------AATCGCGTT------------------------------------------------GTGCAGTGCTTCCAGT----TA
dp5 3:12677054-12677222 - dps-mir-6-1 Known_mirbase --CACAC-ATGGGAAACGAAA---CGCTCAGCGGTG--------------------------------G------------------------------AGA--------CCACACCAGCCTTTGAAGTAGAGAGAATAGTTGCTGTGCTATATGTCCTTCG-AC--TCTATATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CAAACAGCCAAGG-------AATCGCGTT------------------------------------------------GTGCAGTGCTTCCAGT----TA
droWil2 scf2_1100000004514:1651288-1651444 - dwi-mir-6-1 Known_mirbase AA-CAAT-A--TCCAGCAAAG---TTTTCA--AGTG-----------------------------------GTTT-----------------------------------TC-AACCAGCCTTTAAAGTAGAGAGAATAGTTGCTGTGTTTTATGCCCTTTT--C-AATTTCATATCACAGTGGCTGTTCTTTTTGTGCCTAAAGTGC--CCCACAACAACAAC--AA------------CA----ACA--------------------------------------------CA-TTCAAAA----TA
droVir3 scaffold_12875:4112555-4112757 + dvi-mir-6-1 Known_mirbase AA-CACC-ACATACGAT-CTA---TATCCA--TGTCTATATAGACTTAAAACTATATCGCCC-AGTTATCTGT----------------------------------------TTATAGCCTTTAAAGTAGAGAGAATAGACGCTGTGCTGTATGTTTTGCG--TATGGTCTATATCACAGTGGCTGTTCTTTTTGTACCTGAAGCGC--CGTACAACGTTGAT--TT-----------CTTAAATTGTGAA-----------------------------AATTGA-------ATAAATATT----TG
droMoj3 scaffold_6496:20936242-20936447 - dmo-mir-6-1 Known_mirbase TA-CAAT-A--TGAATGTGAA---TATTTATAAGTGTATATA--------------------TAT---TTATTTC---------------TCTAGTGTT--------------TTTTCGCCTTTAAAGTAGAGAGAATAGATGCTGTGA-----GTATATCT-GTTGCATTTATATCACAGTGGCTGTTCTTTTTGTACCTAAATGGC--CAGACAGCATTATT--T---------------------------TTCGCCAATTGCCAAATATAAAGTGAAACATGAGCACAGTA---TTCGC----AG
droGri2 scaffold_5621:3389-3508 + dgr-mir-6-4 Known_mirbase ---------------------------------------------------------------------------------------------------------------------AGCCTTTAATGTAAAGAGAATAGATGCTGTGCTGTATGTTGAACG--TATTGTCTATATCACAGTGGCTGTTCTTTTTGTACCAAAAGTGC--CGTACAACAAAATG--AG------------TA--------------------------------------------------ATGTTATCAAC----CG
droAna3 scaffold_13266:9731767-9731936 + dan-mir-6-1 Known_mirbase ATGCATC-AAAA---ATAACG---AGTTAGGTG-----------------------------------ACAG---------------------------GACTCGCAGG---ATACCCGCCTTTAAAGTAGAGAGAATAGTGGCTGTGCTGTAAGTTTCA------AAATCTATATCACAGTGGCTGTTCTTTTTGCACCTAAAGTGC--CAAACAGCCAAACC--CGAGAAT---GTT--C----TGT--------------------------------------------GATTTTTCGT----TA
droBip1 scf7180000396427:874719-874896 + ATTCATC-AGAG---AT--CG---AGT-TAGTG--------------------------------------ACTT-----G---------------AAGGAGTCGCAGG---ATACCCGCCTTTAAAGTAGAGAGAATAGTGGCTGTGCTGTATGTTACCA-------TTCTATATCACAGTGGCTGTTCTTTTTGCACCTAAAGTGC--CAAACAGCCAAGAC-CCAAGAAT-------------TGTGATTTTTCGCCATCCG---------------------------------ACAGA----TA
droKik1 scf7180000302679:88921-89085 - AA-GATT-C--------------------AACGATT----------------------GATC-AGTTCT----------AAGGTTCTATGAGCA------------AGGATC-ACACAGCCTTTAAAGTAGAGAGAATAGCTGCTGCGCTGTATGTTTGC-------CATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--GAAACACCAAGGCT--CA------------TT----TG---------------------------------------------GGTTTATATT----TT
droFic1 scf7180000454039:847610-847787 - --TCATC-AAAGGAAAAAA-------------------------------------CA----------------TACTTAAAGTTACAATTTTAGTGATGAA-----------TCACAGCCTTTAAAGTAGAGGGAATAGTTGCTGTGCTGTAAGTTATTTATCAAAAATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CAAACATCAATGTT-TT-----------TGTT----T----------------------------------------------TTCTTTTCGTTCGTAT
droEle1 scf7180000491201:2013549-2013718 - ---CATCGATGGGAAATAC-------------------------------------AATCCAAAA---ACAGTT------------------CTGTGCCGAA-----------TCTCAGCCTTTAAAGTAGAGGGAATAGTTGCTGTGCTGTAAGTAACTAA-ACTATACCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CAAACATCAAAGCGGCCA-----------ATA----TT---------------------------------------------TGTTTTCATT----TT
droRho1 scf7180000780066:74036-74201 + --TCATC-GAGGGAAATAA-------------------------------------GATTCGAAATTATCAGTT------------------CTGTGCCAAA-----------TCACAGCCTTTAAAGTAGAGGGAATAGTTGCTGTGCTGTAAGTTACTAA--CTATACCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CAAACATCAAAGCT-CT-----------AGTT----T----------------------------------------------T----ATTTT----TC
droBia1 scf7180000302143:3059383-3059547 - --TCATC-AAGGGAAATAC-------------------------------------CATCCGAAATTACCTGTC------------------CAATGCTGAA-----------ACACAGCCTTTAAAGTAGAGGGAATAGTTGCTGTGCTGTAAGTTACCAA-GCTATATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CTGACATCAGACGT-TT-----------AGT--------------------------------------------------------TCTCCC----TG
droTak1 scf7180000415384:84432-84579 + A-ACATC-AAGGGATATAC------TATTAA----------------------------CCA-AG---------------------------------TAAA-----------ACATAGCCTTTAAAGTAGAGGGAATAGTTGCTGTGCTGTAAGTTACTAA-GCTATATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CTAACACCAGTC------------------------------------------------------------------------G-TTTTAGT----TT
droEug1 scf7180000409474:2397217-2397379 + --TCATC-AAGGTTATTAAACTAATAC----------------------------------------------T------------------CAGTGCCAAA-----------TCACAGCCTTTAAAGTAGAGGGAATAGTTGCTGTGTTGTATGCTACTTA-ACAATATCTATATCACAGTGGCTGTTCTTTTTGCATCTAAAGTGA--CTAACATCATTCGT-TT-----------TGTT----TT--------------------------------------------TTGT-TTTATA----TT
dm3 chr2R:15548471-15548644 - dme-mir-6-1 Known_mirbase --TCATC-AAGGAAAATGA-------------------------------------AAGTCAAAGTTGGCAGCTTACTTAA---------------ACTTAA-----------TCACAGCCTTTAATGTAGAGGGAATAGTTGCTGTGCTGTAAGTTAATAT-ACCATATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CTAACATCATTATT--TA-----------ATT----TT---------------------------------------------TTTTTTTTTT----GG
droSim2 2r:16195756-16195916 - dsi-mir-6-1 Known_mirbase --TCATC-AAGGAAAATGA-------------------------------------AAGCCA-AGTTGGCAGCTTACT-AA---------------ACTTAA-----------TCACAGCCTTTAAAGTAGAGGGAATAGTTGCTGTGCTGTAAGTTTATAT-ACCGTATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAG-GCATTTTACATCATTAT--------------------------------------------------------------------------TTAATT----TA
droSec2 scaffold_1:13063204-13063373 - dse-mir-6-1 Known_mirbase --TCATC-AAGGAAAATTA--------------------------------------AGCCA-AGTTGGCAGCTTACT-AA---------------ACTTAA-----------TCACAGCCTTTAAAGTAGAGGGAATAGTTGCTGTGCTGTAAGTTAATAT-ACCATATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAG-GCATTTTACATCATTATT--TA-----------ATT---------------------------------------------------TACTTTTTTT----TG
droYak3 2R:13624147-13624318 + dya-mir-6-1 Known_mirbase --TCATC-AAGGGAAATGA-------------------------------------AAGCCAAAGTCGGCATCTCACT-AA---------------GTTTAA-----------TCACAGCCTTTAACGTAGAGGGAATAGTTGCTGTGCTGTAAGTTAATAA-CAAATATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CTAACATCATTAAT--AA------------TT----TGT--------------------------------------------TGC-TTTTTT----TG
droEre2 scaffold_4845:9748725-9748894 - der-mir-6-1 Known_mirbase ---CATCAATGGGAAATGA-------------------------------------AAGCCAAAGTTGCCAGCTTACT-TA---------------GCTAAA-----------TCGCAGCCTTTAAAGTAGAGGGAATAGTTGCCGTGCTGTAAGTTAATAT-ATCATATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CTAACATCATCATT--T-----------TGT----------------------------------------------------TGCCTTATTT----TG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
--CACAC-ATGGGAAACGAAA---CACTCAGCGATG--------------------------------G------------------------------AGA--------CCACACCAGCCTTTGAAGTAGAGAGAATAGTTGCTGTGCTATATGTCCTTCG-AC--TCTATATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CAAACAGCCAAGG-------AATCGCGTT------------------------------------------------GTGCAGTGCTTCCAGT----TASizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT..................................................................................................................223146.00438941300115
...................................................................................................................................AGAGAATAGTTGCTGTGCTATA............................................................................................................................................................221106.0010610105000
...................................................................................................................................AGAGAATAGTTGCTGTGCTAT.............................................................................................................................................................21153.00533045032
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTT...................................................................................................................21325.00758620005
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT..................................................................................................................21314.67440440000
...................................................................................................................................AGAGAATAGTTGCTGTGCTATAT...........................................................................................................................................................23114.00140014000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG.................................................................................................................2325.0010070003
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTT....................................................................................................................2035.0015680001
...................................................................................................................................AGAGAATAGTTGCTGTGCTA..............................................................................................................................................................2015.005203000
....................................................................................................................................GAGAATAGTTGCTGTGCTAT.............................................................................................................................................................2013.003003000
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTT...................................................................................................................2033.009090000
....................................................................................................................................GAGAATAGTTGCTGTGCTATAT...........................................................................................................................................................2212.002002000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGT................................................................................................................2412.002020000
...................................................................................................................................AGAGAATAGTTGCTGTGCTAG.............................................................................................................................................................2111.001100000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTT.....................................................................................................................1931.003030000
...................................................................................................................................AGAGAATAGTTGCTGTGCTATT............................................................................................................................................................2211.001001000
...................................................................................................................................AGAGAATAGTTGCTGTGCTT..............................................................................................................................................................2011.001001000
...................................................................................................................................AGAGAATAGTTGCTGTGCTATATC..........................................................................................................................................................2411.001001000
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG.................................................................................................................2221.002020000
...............................................................................................................................................................................TCACAGTGGCTGTTCTTTTT..................................................................................................................2030.672020000
...............................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGA................................................................................................................2220.501010000
...............................................................................................................................................................................TCACAGTGGCTGTTCTTTT...................................................................................................................1930.331010000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA..................................................................................................................2230.331010000
............................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT...................................................................................................................2230.331010000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG..................................................................................................................2230.331010000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA.................................................................................................................2330.331010000
................................................................................................................................................................................CACAGTGGCTGTTCTTTTT..................................................................................................................1930.331010000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTC....................................................................................................................2030.331100000
dp5
--CACAC-ATGGGAAACGAAA---CGCTCAGCGGTG--------------------------------G------------------------------AGA--------CCACACCAGCCTTTGAAGTAGAGAGAATAGTTGCTGTGCTATATGTCCTTCG-AC--TCTATATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CAAACAGCCAAGG-------AATCGCGTT------------------------------------------------GTGCAGTGCTTCCAGT----TASizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT..................................................................................................................22338201.331146040681510770178307000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTT...................................................................................................................2136091.0018273012371700029205000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC..................................................................................................................2231760.0052800452724000000
...................................................................................................................................AGAGAATAGTTGCTGTGCTATA............................................................................................................................................................221867.0086705123073900000
...................................................................................................................................AGAGAATAGTTGCTGTGCTAT.............................................................................................................................................................211486.00486010214026200000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTT....................................................................................................................203403.001209013410741000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG.................................................................................................................232249.004980794190000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGT................................................................................................................241242.002420232190000000
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT..................................................................................................................213194.005820505770000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTC...................................................................................................................213169.33508025060000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC.................................................................................................................233159.004770124641000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA.................................................................................................................233100.003000222770001000
...................................................................................................................................AGAGAATAGTTGCTGTGCTAC.............................................................................................................................................................21170.007000700000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTC....................................................................................................................20362.00186001842000000
...................................................................................................................................AGAGAATAGTTGCTGTGCTATAT...........................................................................................................................................................23151.005100304800000
...................................................................................................................................AGAGAATAGTTGCTGTGCTA..............................................................................................................................................................20150.0050012302600000
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTT...................................................................................................................20340.001200106140000000
............................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT...................................................................................................................22330.339107840000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTT.....................................................................................................................19327.6783024590000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC................................................................................................................24226.505300530000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA..................................................................................................................22324.677406680000000
....................................................................................................................................GAGAATAGTTGCTGTGCTATAT...........................................................................................................................................................22118.001801101600000
...............................................................................................................................................................................TCACAGTGGCTGTTCTTTTT..................................................................................................................20317.0051032190000000
...................................................................................................................................AGAGAATAGTTGCTGTGCTATT............................................................................................................................................................22114.001400101300000
............................................................................................................................................................................ATATCACAGTGGCTGTTCTTTTT..................................................................................................................23313.674108330000000
....................................................................................................................................GAGAATAGTTGCTGTGCTAT.............................................................................................................................................................20113.00130150700000
...............................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGT................................................................................................................22112.001201110000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCC................................................................................................................24310.673206260000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG..................................................................................................................22310.333109220000000
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTT....................................................................................................................1938.332502230000000
....................................................................................................................................GAGAATAGTTGCTGTGCTATA............................................................................................................................................................2118.0080020600000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTG...................................................................................................................2138.002401230000000
................................................................................................................................................................................CACAGTGGCTGTTCTTTTT..................................................................................................................1937.6723010130000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCT......................................................................................................................1837.002108130000000
...................................................................................................................................AGAGAATAGTTGCTGTGCTATC............................................................................................................................................................2217.0070010600000
............................................................................................................................................................................ATATCACAGTGGCTGTTCTTT....................................................................................................................2135.331600160000000
.................................................................................................................................................................................ACAGTGGCTGTTCTTTTT..................................................................................................................1835.001503120000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGA................................................................................................................2424.5090090000000
...................................................................................................................................AGAGAATAGTTGCTGTGCTATAAA..........................................................................................................................................................2414.0040010300000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA................................................................................................................2434.001202100000000
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG.................................................................................................................2224.0080710000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGTA...............................................................................................................2513.0030030000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTCC.................................................................................................................2333.0090180000000
...................................................................................................................................AGAGAATAGTTGCTGTGCTATAAAA.........................................................................................................................................................2513.0030000300000
...................................................................................................................................AGAGAATAGTTGCTGTGC................................................................................................................................................................1813.0030030000000
...................................................................................................................................AGAGAATAGTTGCTGTGCTATAA...........................................................................................................................................................2313.0030020100000
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTGT................................................................................................................2313.0030210000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAA.................................................................................................................2332.0060230001000
...................................................................................................................................AGAGAATAGTTGCTGTGCTATAC...........................................................................................................................................................2312.0020010100000
...................................................................................................................................AGAGAATAGTTGCTGTGCTATG............................................................................................................................................................2212.0020010100000
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTC..................................................................................................................2132.0060150000000
...................................................................................................................................AGAGAATAGTTGCTGTGCT...............................................................................................................................................................1912.0020010100000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGTC...............................................................................................................2512.0020020000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTC.....................................................................................................................1931.6750050000000
..............................................................................................................................................................................ATCACAGTGGCTGTTCTT.....................................................................................................................1831.6750500000000
...............................................................................................................................................................................TCACAGTGGCTGTTCTTTTTG.................................................................................................................2121.5030120000000
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTC.................................................................................................................2231.3340310000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTCC..................................................................................................................2231.3340040000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCCC...............................................................................................................2531.3340040000000
droWil2
AA-CAAT-A--TCCAGCAAAG---TTTTCA--AGTG-----------------------------------GTTT-----------------------------------TC-AACCAGCCTTTAAAGTAGAGAGAATAGTTGCTGTGTTTTATGCCCTTTT--C-AATTTCATATCACAGTGGCTGTTCTTTTTGTGCCTAAAGTGC--CCCACAACAACAAC--AA------------CA----ACA--------------------------------------------CA-TTCAAAA----TASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT..................................................................................................................22335155.671054670180701036555
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTT...................................................................................................................2138217.002465103441243042
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTT....................................................................................................................2031168.673506059534411
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA.................................................................................................................2331099.333298010032880
...................................................................................................................................AGAGAATAGTTGCTGTGTTTTATG..........................................................................................................................................................241379.003790003790
.............................................................................................................................................................................TATCACAGTGGCTGTTCTT.....................................................................................................................193320.009600609504
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA................................................................................................................243217.006510506460
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA..................................................................................................................223189.675690405650
.............................................................................................................................................................................TATCACAGTGGCTGTTCT......................................................................................................................183128.333850303820
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG.................................................................................................................23283.501670601610
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT..................................................................................................................21370.3321101430680
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAAA...............................................................................................................25346.001380001380
.................................................................................................................................................................................ACAGTGGCTGTTCTTTTT..................................................................................................................18345.001350101340
...................................................................................................................................AGAGAATAGTTGCTGTGTTTT.............................................................................................................................................................21145.0045000450
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAA.................................................................................................................23341.671250001250
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC..................................................................................................................22340.331210101200
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC.................................................................................................................23332.3397000970
...................................................................................................................................AGAGAATAGTTGCTGTGTTTTATGA.........................................................................................................................................................25121.0021000210
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG..................................................................................................................22318.6756000560
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTT...................................................................................................................20316.00480310170
...................................................................................................................................AGAGAATAGTTGCTGTGTTTTAT...........................................................................................................................................................23116.0016000160
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGT................................................................................................................24112.001205070
...................................................................................................................................AGAGAATAGTTGCTGTGTTTTA............................................................................................................................................................22111.0011000110
...............................................................................................................................................................................TCACAGTGGCTGTTCTTTTT..................................................................................................................20310.33310120190
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTA...................................................................................................................2139.3328010270
............................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT...................................................................................................................2238.6726000260
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAAA................................................................................................................2437.3322000220
...................................................................................................................................AGAGAATAGTTGCTGTGTTTTATGAA........................................................................................................................................................2617.00700070
................................................................................................................................................................................CACAGTGGCTGTTCTTTTT..................................................................................................................1936.0018000180
............................................................................................................................................................................ATATCACAGTGGCTGTTCTTT....................................................................................................................2134.6714000140
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTC...................................................................................................................2134.3313000130
...................................................................................................................................AGAGAATAGTTGCTGTGTTT..............................................................................................................................................................2014.00400040
...................................................................................................................................AGAGAATAGTTGCTGTGTTTTATA..........................................................................................................................................................2414.00400040
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCC................................................................................................................2433.6711000110
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGA................................................................................................................2423.50700070
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTAA..................................................................................................................2243.2513000130
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTT....................................................................................................................1932.67807010
.................................................................................................................................................................................ACAGTGGCTGTTCTTTTTA.................................................................................................................1932.67800080
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG.................................................................................................................2222.50500050
.......................................................................................................................................AATAGTTGCTGTGTTTTATG..........................................................................................................................................................2012.00200020
...............................................................................................................................................................................TCACAGTGGCTGTTCTTTT...................................................................................................................1932.00600060
....................................................................................................................................GAGAATAGTTGCTGTGTTTTATG..........................................................................................................................................................2312.00200020
................................................................................................................................................................................CACAGTGGCTGTTCTTTT...................................................................................................................1831.67500050
............................................................................................................................................................................ATATCACAGTGGCTGTTCTTTTT..................................................................................................................2331.33402020
............................................................................................................................................................................ATATCACAGTGGCTGTTCTT.....................................................................................................................2031.33400040
...............................................................................................................................................................................TCACAGTGGCTGTTCTTTTTAA................................................................................................................2231.33400040
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAC................................................................................................................2431.00301020
...............................................................................................................................................................................TCACAGTGGCTGTTCTTTTTG.................................................................................................................2121.00200020
...................................................................................................................................AGAGAATAGTTGCTGTGTTTTATT..........................................................................................................................................................2411.00100010
...................................................................................................................................AGAGAATAGTTGCTGTGTTTTATGC.........................................................................................................................................................2511.00100010
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTGT................................................................................................................2311.00100010
...............................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGT................................................................................................................2211.00101000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTG...................................................................................................................2131.00300030
...............................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGTG...............................................................................................................2311.00100010
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAAC...............................................................................................................2531.00300030
...................................................................................................................................AGAGAATAGTTGCTGTGTTTTATGAAA.......................................................................................................................................................2711.00100010
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTGA.................................................................................................................2330.67200020
.................................................................................................................................................................................ACAGTGGCTGTTCTTTTA..................................................................................................................1830.67200020
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTCC.................................................................................................................2330.67200020
droVir3
AA-CACC-ACATACGAT-CTA---TATCCA--TGTCTATATAGACTTAAAACTATATCGCCC-AGTTATCTGT----------------------------------------TTATAGCCTTTAAAGTAGAGAGAATAGACGCTGTGCTGTATGTTTTGCG--TATGGTCTATATCACAGTGGCTGTTCTTTTTGTACCTGAAGCGC--CGTACAACGTTGAT--TT-----------CTTAAATTGTGAA-----------------------------AATTGA-------ATAAATATT----TGSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT..................................................................................................................22334949.671048490030299170000000000000000000000000000000000001433193312825233385284224634757247948683020205523572021149061432062301156613991044884415060934242427422502272
...................................................................................................................................AGAGAATAGACGCTGTGCTGTA............................................................................................................................................................2218730.0087300002390000000012870000000000000000004802583138354004942413529262011996745853003640000020722718592322141305346346276295
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTT...................................................................................................................2135932.671779800754630000000000000000000000000000000000004141814512435630533860650910478455998076453301979104008216197622010020370688662600610
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC.................................................................................................................2333316.00994800132000000000000000000000000000000000000001271159533527618240242077764140150644411018770020102435340001012146562221
...................................................................................................................................AGAGAATAGACGCTGTGCTGT.............................................................................................................................................................2111208.001208000560000000023300000000000000000020141019001155243200252026332231221716141002612000001110580100004759603238
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGT................................................................................................................241806.00806000850000000000000000000000000000000000001034342305626522151201212800033000000149761000017249431927
...................................................................................................................................AGAGAATAGACGCTGTGCTG..............................................................................................................................................................201697.0069700070000000000000000000000000000001228001120200146241710217810123000710000046540000003534252218
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCC................................................................................................................243570.00171000045100000000000000000000000000000000000001118204955194976180126759060000392000000625010000715453
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTT....................................................................................................................203518.001554006361000000000000000000000000000000000000135111015161836316666384439000199000000273343000000369284137137
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC..................................................................................................................223494.671484000109600000000000000000000000000000000000000041101311918233616281800015100100046900010158906
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG.................................................................................................................232359.007180001670000000000000000000000000000000000000011511152472715352218151200039000000151398200000664232819
................................................................................................................................TAGAGAGAATAGACGCTGTGCT...............................................................................................................................................................221292.0029200060000000000000000000000000000000402000053125191613259155111050006200000131300000011242623
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA.................................................................................................................233179.3353800164000000000000000000000000000000000000001710221517251013134760002200000014191120000005435251824
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGTC...............................................................................................................251178.0017800013000000000000000000000000000000000000000165162381710187578010900000031200000015300
...................................................................................................................................AGAGAATAGACGCTGTGCTGTAA...........................................................................................................................................................231176.00176000200000000100000000000000000001012418001092522141411200000021000001126000000222966
...................................................................................................................................AGAGAATAGACGCTGTGC................................................................................................................................................................181150.001500003000000000000000000000000000000000000001946474102050000000000000002800000072103
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCCC...............................................................................................................253126.6738000027000000000000000000000000000000000000000851212442949532731190009200000000500100110000
...................................................................................................................................AGAGAATAGACGCTGTGCTGTAAA..........................................................................................................................................................24178.00780000000000000000000000000000000000012100001124612000000000001000000011200000062521
.............................................................................................................................................................................TATCACAGTGGCTGTTCTT.....................................................................................................................19350.33151001180000000000000000000000000000000000000002221356410994010170010001260000006822110
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTC...................................................................................................................21335.3310600098000000000000000000000000000000000000000000000001001000510000000000000000000
...............................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGT................................................................................................................22133.00330004000000000000000000000000000000000000000010231103110000300000022300000020400
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA................................................................................................................24329.33880001000000000000000000000000000000000000000013244123102000000000052190000011413334
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTCC.................................................................................................................23328.3385001440000000000000000000000000000000000000100011120362330001300000000000000021100
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA..................................................................................................................22326.0078000140000000000000000000000000000000000000001103120510120000000000421300000067924
...................................................................................................................................AGAGAATAGACGCTGTGCTGTC............................................................................................................................................................22125.0025000000000000000000000000000000000000000000002000000000000000000001011000000110000
.............................................................................................................................................................................TATCACAGTGGCTGTTCT......................................................................................................................18321.0063000500000000000000000000000000000000000000010000142112200020000001013000000102268
.....................................................................................................................................AGAATAGACGCTGTGCTGTATG..........................................................................................................................................................22120.00200000000000000000000000000000000000010000000510001200002000000000000300000030101
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTC....................................................................................................................20317.005100050000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG..................................................................................................................22316.334900080000000000000000000000000000000000000000220220100210006000000013000000210052
...................................................................................................................................AGAGAATAGACGCTGTGCTGC.............................................................................................................................................................21116.001600011000000000000000000000000000000000000000310010000000000000000000000000000000
....................................................................................................................................GAGAATAGACGCTGTGCTGTA............................................................................................................................................................21114.00140000000000000000000000000000000000000000000450000000000000000000000100000010012
...................................................................................................................................AGAGAATAGACGCTGTGCTGTAT...........................................................................................................................................................23114.00140001000000000000000000000000000000010200000100000101101000110000000000000011100
...................................................................................................................................AGAGAATAGACGCTGTGCT...............................................................................................................................................................19113.00130001000000000000000000000000000000000100000101010010000000010000000300000011001
...................................................................................................................................AGAGAATAGACGCTGTGCTGTAAAA.........................................................................................................................................................25113.00130001000000000000000000000000000000000000002200000000000000000000010100000020013
................................................................................................................................TAGAGAGAATAGACGCTGTGC................................................................................................................................................................21112.00120001000000000000000000000000000000000000000011010010000000100000000300000002010
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT..................................................................................................................21311.333400321000000000000000000000000000000000000000200001010100000200000000100000020000
.................................................................................................................................AGAGAGAATAGACGCTGTGCTG..............................................................................................................................................................22111.00110000000000000000000000000000000000000000002310012100000000000000000100000000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC................................................................................................................2429.501900018000000000000000000000000000000000000000000000000000000000000000100000000000
...................................................................................................................................AGAGAATAGACGCTGTGCTGTT............................................................................................................................................................2219.0090001000000000000000000000000000000000000000100001012000000200000000000000000100
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCA................................................................................................................2439.00270003000000000000000000000000000000000000000221112032020000500000000000000001110
...................................................................................................................................AGAGAATAGACGCTGTGCTGTAG...........................................................................................................................................................2318.0080000000000000000000000000000000000000000000010200000000000100000000300000000001
................................................................................................................................................................................CACAGTGGCTGTTCTTTTTGTACC.............................................................................................................2418.0080000000000000000000000000000000000000000001101000000000000000000000300000000002
...............................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGTC...............................................................................................................2318.0080000000000000000000000000000000000000000000002011010100000200000000000000000000
............................................................................................................................................................................ATATCACAGTGGCTGTTCTTTTT..................................................................................................................2337.67230010000000000000000000000000000000000000010031213121003010100000000100000000100
................................................................................................................................TAGAGAGAATAGACGCTGTGCTC..............................................................................................................................................................2317.0070000000000000000000000000000000000000000000112011100000000000000000000000000000
.................................................................................................................................................................................ACAGTGGCTGTTCTTTTT..................................................................................................................1837.00210006000000000000000000000000000000000000000010000010010000010000011400000031010
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGA................................................................................................................2426.50130002000000000000000000000000000000000000000000001000000000000000002400000003010
....................................................................................................................................GAGAATAGACGCTGTGCTGT.............................................................................................................................................................2016.0060000000000000000000000000000000000000000000200010000000000300000000000000000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGTCA..............................................................................................................2616.0060000000000000000000000000000000000000000000101002200000000000000000000000000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTCCC................................................................................................................2436.00180008000000000000000000000000000000000000000000200011101000100000000000003000000
.............................................................................................................................................................................TATCACAGTGGCTGTTC.......................................................................................................................1735.67170000000000000000000000000000000000000000000000000010001000000000002400000030222
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG.................................................................................................................2225.50110006000000000000000000000000000000000000000000010000000000000000000300000010000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAA.................................................................................................................2335.33160002000000000000000000000000000000000000000001000010010000000000031100000102021
...........................................................................................................................................................................TATATCACAGTGGCTGTTCTTT....................................................................................................................2225.00100001000000000000000000000000000000000000000110000000100000000000000200000011200
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTGT................................................................................................................2315.0050001000000000000000000000000000000000000000000000001000000000000000100000010001
...................................................................................................................................AGAGAATAGACGCTGTGCTGG.............................................................................................................................................................2115.0050000000000000000000000000000000000000000000020000020000000000000000100000000000
...............................................................................................................................................................................TCACAGTGGCTGTTCTTTTT..................................................................................................................2035.00150007000000000000000000000000000000000000000010100000000000000000000100000011102
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGTT...............................................................................................................2524.5090001000000000000000000000000000000000000000102002100100000100000000000000000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAAA................................................................................................................2434.00120000000000000000000000000000000000000000000000000000000000000000033000000110121
......................................................................................................................................GAATAGACGCTGTGCTGTA............................................................................................................................................................1914.0040000000000000000000000000000000000000000000100000000000000000000010100000010000
.........................................................................................................................................................TGTTTTGCG--TATGGTCTA........................................................................................................................................1814.0040000000000000200000000000000000000000000000000000000000000000000000100000010000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGTCT..............................................................................................................2624.0080000000000000000000000000000000000000000000002001101101000100000000000000000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAC................................................................................................................2433.67110000000000000000000000000000000000000000000031100012001000200000000000000000000
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTT...................................................................................................................2033.0090005000000000000000000000000000000000000000010000000000000100000000000000001001
.................................................................................................................................AGAGAGAATAGACGCTGTGCT...............................................................................................................................................................2113.0030000000000000000000000000000000000000000000000100000000000100000000000000000100
................................................................................................................................TAGAGAGAATAGACGCTGTGCG...............................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000001010000000000000000000001000
...................................................................................................................................AGAGAATAGACGCTGTGCTGTATG..........................................................................................................................................................2413.0030000000000000000000000000000000000000000000010000000000000000000000100000000100
.....................................................................................................................................AGAATAGACGCTGTGCTGTA............................................................................................................................................................2013.0030000000000000000000000000000000000010100000000000000000000010000000000000000000
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTC.................................................................................................................2233.0090008000000000000000000000000000000000000000000000000001000000000000000000000000
...................................................................................................................................AGAGAATAGACGCTGTGCTGTG............................................................................................................................................................2212.0020000000000000000000000000000000000000000000010000000000000000000000000000001000
droMoj3
TA-CAAT-A--TGAATGTGAA---TATTTATAAGTGTATATA--------------------TAT---TTATTTC---------------TCTAGTGTT--------------TTTTCGCCTTTAAAGTAGAGAGAATAGATGCTGTGA-----GTATATCT-GTTGCATTTATATCACAGTGGCTGTTCTTTTTGTACCTAAATGGC--CAGACAGCATTATT--T---------------------------TTCGCCAATTGCCAAATATAAAGTGAAACATGAGCACAGTA---TTCGC----AGSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT..................................................................................................................223175659.67526979301005269462
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTT...................................................................................................................21371420.67214262141002142425
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC.................................................................................................................2339565.33286966000286900
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTT....................................................................................................................2035461.67163853000163802
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC..................................................................................................................2234979.00149371000149360
...................................................................................................................................AGAGAATAGATGCTGTGA-----GTAT.......................................................................................................................................................2211583.00158313550012261
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTC...................................................................................................................2131153.673461000034610
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCC................................................................................................................243749.332248000022480
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG.................................................................................................................232623.501247100012442
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTC....................................................................................................................203612.001836000018360
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT..................................................................................................................213393.671181200011790
.............................................................................................................................................................................TATCACAGTGGCTGTTCTT.....................................................................................................................193276.6783001008281
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA.................................................................................................................233230.3369100006910
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGT................................................................................................................241191.0019100001910
...................................................................................................................................AGAGAATAGATGCTGTGA-----GTATA......................................................................................................................................................231164.00164012001520
...................................................................................................................................AGAGAATAGATGCTGTGA-----GTAC.......................................................................................................................................................221147.0014702001450
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTT...................................................................................................................203132.3339710003960
...................................................................................................................................AGAGAATAGATGCTGTGA-----GTA........................................................................................................................................................211126.0012604001220
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG.................................................................................................................22295.5019100001910
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA..................................................................................................................22389.6726900002690
...............................................................................................................................................................................TCACAGTGGCTGTTCTTTTT..................................................................................................................20389.6726900002690
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTCC.................................................................................................................23368.6720600002060
................................................................................................................................................................................CACAGTGGCTGTTCTTTTT..................................................................................................................19365.3319600001960
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCCC...............................................................................................................25353.6716100001610
.................................................................................................................................................................................ACAGTGGCTGTTCTTTTT..................................................................................................................18347.6714300001430
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTG...................................................................................................................21346.6714000001400
...................................................................................................................................AGAGAATAGATGCTGTGA-----GT.........................................................................................................................................................20136.00360400320
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC................................................................................................................24234.50690000690
...............................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGT................................................................................................................22133.00330000330
............................................................................................................................................................................ATATCACAGTGGCTGTTCTTT....................................................................................................................21331.33940000940
...............................................................................................................................................................................TCACAGTGGCTGTTCTTTT...................................................................................................................19331.33940000940
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG..................................................................................................................22328.67860000860
................................................................................................................................................................................CACAGTGGCTGTTCTTTT...................................................................................................................18328.33850000850
.............................................................................................................................................................................TATCACAGTGGCTGTTCT......................................................................................................................18326.33790000790
...................................................................................................................................AGAGAATAGATGCTGTGA-----GC.........................................................................................................................................................20118.00180000180
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGTC...............................................................................................................25118.00180000180
...................................................................................................................................AGAGAATAGATGCTGTGA-----GTATT......................................................................................................................................................23117.00170400130
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTC.................................................................................................................22316.00480000480
.............................................................................................................................................................................TATCACAGTGGCTGTTCTC.....................................................................................................................19314.67440000440
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTT....................................................................................................................19311.00330000330
....................................................................................................................................GAGAATAGATGCTGTGA-----GTAT.......................................................................................................................................................21111.00110100100
...............................................................................................................................................................................TCACAGTGGCTGTTCTTTTTG.................................................................................................................21210.50210000210
............................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT...................................................................................................................22310.00300000300
................................................................................................................................................................................CACAGTGGCTGTTCTTTTTC.................................................................................................................2039.33280000280
...............................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGC................................................................................................................2229.00180000180
droGri2
---------------------------------------------------------------------------------------------------------------------AGCCTTTAATGTAAAGAGAATAGATGCTGTGCTGTATGTTGAACG--TATTGTCTATATCACAGTGGCTGTTCTTTTTGTACCAAAAGTGC--CGTACAACAAAATG--AG------------TA--------------------------------------------------ATGTTATCAAC----CGSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT..................................................................................................................2262.5015105
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTT...................................................................................................................2161.831129
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTT....................................................................................................................2060.33202
droAna3
ATGCATC-AAAA---ATAACG---AGTTAGGTG-----------------------------------ACAG---------------------------GACTCGCAGG---ATACCCGCCTTTAAAGTAGAGAGAATAGTGGCTGTGCTGTAAGTTTCA------AAATCTATATCACAGTGGCTGTTCTTTTTGCACCTAAAGTGC--CAAACAGCCAAACC--CGAGAAT---GTT--C----TGT--------------------------------------------GATTTTTCGT----TASizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT..................................................................................................................22315043.3345130367447520074
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTT...................................................................................................................2133049.3391489790392028
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC..................................................................................................................223462.001386013860000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTT....................................................................................................................203276.00828267920082
...................................................................................................................................AGAGAATAGTGGCTGTGCTGTA............................................................................................................................................................22172.00720720000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTC...................................................................................................................21357.6717301720001
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTC....................................................................................................................20337.0011101110000
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT..................................................................................................................21335.6710740670000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC.................................................................................................................23334.6710401040000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA.................................................................................................................23333.671013980000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTT.....................................................................................................................19317.33528390023
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG.................................................................................................................23214.00282240011
...............................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGC................................................................................................................22112.00120120000
................................................................................................................................................................................CACAGTGGCTGTTCTTTTT..................................................................................................................1938.67260260000
...............................................................................................................................................................................TCACAGTGGCTGTTCTTTTT..................................................................................................................2038.00245190000
...................................................................................................................................AGAGAATAGTGGCTGTGCTGT.............................................................................................................................................................2117.007070000
.............................................................................................................................................................................TATCACAGTGGCTGTTCT......................................................................................................................1836.00180180000
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTT...................................................................................................................2036.00187110000
.................................................................................................................................................................................ACAGTGGCTGTTCTTTTT..................................................................................................................1836.00180180000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA..................................................................................................................2235.33160150001
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC................................................................................................................2415.005050000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTG...................................................................................................................2134.33130130000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG..................................................................................................................2233.3310190000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA................................................................................................................2433.009170010
...................................................................................................................................AGAGAATAGTGGCTGTGCTGC.............................................................................................................................................................2113.003030000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGT................................................................................................................2422.505050000
....................................................................................................................................GAGAATAGTGGCTGTGCTGTA............................................................................................................................................................2112.002110000
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTT....................................................................................................................1932.006330000
...............................................................................................................................................................................TCACAGTGGCTGTTCTTTT...................................................................................................................1931.675050000
............................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT...................................................................................................................2231.675050000
...................................................................................................................................AGAGAATAGTGGCTGTGCTG..............................................................................................................................................................2011.001010000
..........................................................................................................................TTAAAGTAGAGAGAATAGTGGCT....................................................................................................................................................................2311.001010000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTC.....................................................................................................................1931.003030000
...................................................................................................................................AGAGAATAGTGGCTGTGCT...............................................................................................................................................................1911.001010000
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTC..................................................................................................................2131.003030000
...................................................................................................................................AGAGAATAGTGGCTGTGCTGTC............................................................................................................................................................2211.001010000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAA.................................................................................................................2330.672020000
............................................................................................................................................................................ATATCACAGTGGCTGTTCTTT....................................................................................................................2130.672020000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTAC..................................................................................................................2230.672020000
................................................................................................................................................................................CACAGTGGCTGTTCTTTT...................................................................................................................1830.672020000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGA................................................................................................................2420.501010000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTGA.................................................................................................................2330.331010000
droBip1
ATTCATC-AGAG---AT--CG---AGT-TAGTG--------------------------------------ACTT-----G---------------AAGGAGTCGCAGG---ATACCCGCCTTTAAAGTAGAGAGAATAGTGGCTGTGCTGTATGTTACCA-------TTCTATATCACAGTGGCTGTTCTTTTTGCACCTAAAGTGC--CAAACAGCCAAGAC-CCAAGAAT-------------TGTGATTTTTCGCCATCCG---------------------------------ACAGA----TASizeHit CountTotal NormTotal
No Reads
droKik1
AA-GATT-C--------------------AACGATT----------------------GATC-AGTTCT----------AAGGTTCTATGAGCA------------AGGATC-ACACAGCCTTTAAAGTAGAGAGAATAGCTGCTGCGCTGTATGTTTGC-------CATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--GAAACACCAAGGCT--CA------------TT----TG---------------------------------------------GGTTTATATT----TTSizeHit CountTotal NormTotal
No Reads
droFic1
--TCATC-AAAGGAAAAAA-------------------------------------CA----------------TACTTAAAGTTACAATTTTAGTGATGAA-----------TCACAGCCTTTAAAGTAGAGGGAATAGTTGCTGTGCTGTAAGTTATTTATCAAAAATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CAAACATCAATGTT-TT-----------TGTT----T----------------------------------------------TTCTTTTCGTTCGTATSizeHit CountTotal NormTotal
No Reads
droEle1
---CATCGATGGGAAATAC-------------------------------------AATCCAAAA---ACAGTT------------------CTGTGCCGAA-----------TCTCAGCCTTTAAAGTAGAGGGAATAGTTGCTGTGCTGTAAGTAACTAA-ACTATACCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CAAACATCAAAGCGGCCA-----------ATA----TT---------------------------------------------TGTTTTCATT----TTSizeHit CountTotal NormTotal
No Reads
droRho1
--TCATC-GAGGGAAATAA-------------------------------------GATTCGAAATTATCAGTT------------------CTGTGCCAAA-----------TCACAGCCTTTAAAGTAGAGGGAATAGTTGCTGTGCTGTAAGTTACTAA--CTATACCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CAAACATCAAAGCT-CT-----------AGTT----T----------------------------------------------T----ATTTT----TCSizeHit CountTotal NormTotal
No Reads
droBia1
--TCATC-AAGGGAAATAC-------------------------------------CATCCGAAATTACCTGTC------------------CAATGCTGAA-----------ACACAGCCTTTAAAGTAGAGGGAATAGTTGCTGTGCTGTAAGTTACCAA-GCTATATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CTGACATCAGACGT-TT-----------AGT--------------------------------------------------------TCTCCC----TGSizeHit CountTotal NormTotal
No Reads
droTak1
A-ACATC-AAGGGATATAC------TATTAA----------------------------CCA-AG---------------------------------TAAA-----------ACATAGCCTTTAAAGTAGAGGGAATAGTTGCTGTGCTGTAAGTTACTAA-GCTATATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CTAACACCAGTC------------------------------------------------------------------------G-TTTTAGT----TTSizeHit CountTotal NormTotal
No Reads
droEug1
--TCATC-AAGGTTATTAAACTAATAC----------------------------------------------T------------------CAGTGCCAAA-----------TCACAGCCTTTAAAGTAGAGGGAATAGTTGCTGTGTTGTATGCTACTTA-ACAATATCTATATCACAGTGGCTGTTCTTTTTGCATCTAAAGTGA--CTAACATCATTCGT-TT-----------TGTT----TT--------------------------------------------TTGT-TTTATA----TTSizeHit CountTotal NormTotal
No Reads
dm3
--TCATC-AAGGAAAATGA-------------------------------------AAGTCAAAGTTGGCAGCTTACTTAA---------------ACTTAA-----------TCACAGCCTTTAATGTAGAGGGAATAGTTGCTGTGCTGTAAGTTAATAT-ACCATATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CTAACATCATTATT--TA-----------ATT----TT---------------------------------------------TTTTTTTTTT----GGSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT..................................................................................................................22320801.006240300008135722249235251300000010000000000000000000000000000000000000500000000000000000000000020472170000000000000000000000000110000000000000000000000000000100000000000000000000000010000000000000000000000100000000000000000000000010015459211244212162759343046154161800002000000000000000000000000000000000197080077012300000000637004648179130060059000010003175384212536104243868269366685913240
...................................................................................................................................AGGGAATAGTTGCTGTGCTGTA............................................................................................................................................................22119494.0019494000000751581800000000000000000000000020500000001000000000000000000000000000000000000003076389733929474110110000000311210711417442800205692920010000000000000000000005105309273530000000000000000000000000000001000000000000001000000000000000000000000100100215013600000004127000010100000000000000000000000000000000000000000010123402500200000000002104030001100002120010000
...................................................................................................................................AGGGAATAGTTGCTGTGCTG..............................................................................................................................................................2015013.0050130000001710000000000000000000000000416600000000000000000000000000000000000000000000008110052800000000000001000000134600600120000000000000000000000003597921500002000000000000000000000000000000000000000000000000000000000100000000000000000000000000330000000000000000000000000000000000110000000000000490100200000000000000000000100000000000000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTT...................................................................................................................2134534.671360400003046283290234340100000000000000000000000000000000000001000020000000000000000000000000015020000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000010000000000000000110033120213534787185631510020300000000000000000000000000000000000000043028028049000000004601738273180020016000000014114203192122726892863001423102157210
...................................................................................................................................AGGGAATAGTTGCTGTGCTGT.............................................................................................................................................................2111791.0017910000005900000000000000000000000000164000000000000000000000000000000000000000000000018338154243000000000000000100120321760016204100000000000000000000000067410240900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000530000000000000000000001000000000000000000000000000763000000000000000000000000000000000000000000
....................................................................................................................................GGGAATAGTTGCTGTGCTGTA............................................................................................................................................................2111069.0010690000001012100000000000000000000000003000000000000000000000000000000000000000000000025442106414200010001010000200003296200274052000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000010000000000000000000000000000000000000000000000000092000000000000000000000000000000000000000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTT....................................................................................................................203778.672336000000415183400000000000000000000000000000000000000000000001000000000000000000000000001410000100000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000300000000000000000000000000116410359327647014400000000000000000000000000000000000000117050705000010004796813404002000000031024081110015011117437113172927090
.............................................................................................................................................................................TATCACAGTGGCTGTTCTT.....................................................................................................................193418.331255000000000000000000000000000000000000000000000000000000001000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000100205110201100080000000000000000000000000000000000000003010310000000003846242015000010000011000100100000002641223295323030
...................................................................................................................................AGGGAATAGTTGCTGTGCTGTAA...........................................................................................................................................................231372.003720000001000000000000000000000000000200000000000000000000000000000000000000000000000291400480000000000000000000058000200400000000000000000000000004627500000000000000000000000000000000000000000000000000000000000000000000000000000000100000000110000000000000000000000000000000000000000000000000195000000000000000010000000000000000000000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG.................................................................................................................232281.005620000003121360000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004203249014500200000000000000000000000000000000000000010002000000000003298700000000000000001003000030000003690011010
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGT................................................................................................................241193.00193000000052200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030270820000000000000000000000000000000000000000000000001000000000128900000000000000000000000000000000130001010
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC.................................................................................................................233152.334570000000901000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003014002000000000000000000000000000000000000000201010000000000112630600000000000000000000000000000000000000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA..................................................................................................................223125.00375000020241847730000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000140004063004000000000000000000000000000000000000000301040200000000011300000101000000001101000010000101200000010
...................................................................................................................................AGGGAATAGTTGCTGTGCT...............................................................................................................................................................19197.00970000000000000000000000000000000000240000000000000000000000000000000000000000000000150122200000000000000000000000003002000000000000000000000000054800000000000000000000000000000000000000000000000000000000000000000000000000000001000000000021000000000000000000000000000000000000000000000000013100200000000000000000000000000000000000000
....................................................................................................................................GGGAATAGTTGCTGTGCTGT.............................................................................................................................................................20188.008800000002000000000000000000000000005300000000000000000000000000000000000000000000008000120000000000000000000033000100100000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000
...................................................................................................................................AGGGAATAGTTGCTGTGCTGTT............................................................................................................................................................22179.00790000000100000000000000000000000000000000000000000000000000000000000000000000000001351170000000000000003000021000000040000000000000000000000001102100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000010000000000000000000015000000000000000000000000000000000000000000
...................................................................................................................................AGGGAATAGTTGCTGTGCTGTC............................................................................................................................................................22172.00720000000000000000000000000000000000000000000000000000000000000000000000000000000004000400000000000000010000010000000000000000000000000000000023430000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000049000100000000000000000000000000000000000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA.................................................................................................................23371.0021300000012894000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000251133034410008000000000000000000000000000000000000000100101001300000000016200000300000000000000000000000001170000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC..................................................................................................................22370.332110000001459311310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000130500010000000000000000000000000000000000000001000000000000000571400000000000000000000000000000000110000000
...................................................................................................................................AGGGAATAGTTGCTGTGCTGTAAA..........................................................................................................................................................24165.0065000000000000000000000000000000000010000000000000000000000000000000000000000000000116001000000000000000000000000001000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000035000000000000000000000000000000000000000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCT......................................................................................................................18350.33151000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200200000000000000000000000000000000000000010000010000000001112310000000000000000000000000000011240000000
.................................................................................................................................................................................ACAGTGGCTGTTCTTTTT..................................................................................................................18347.67143000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003010150800000000000000000000000000000000000000000000000101000000000971400000000000000000000000000000000110000000
.........................................................................................................................................................AGTTAATAT-ACCATATCTA........................................................................................................................................19147.00470000000000000000000000000000000000000000000000000000000000000000000000000000000002260490000000000000000000002000100200000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA................................................................................................................24335.00105000010101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000002211310202003000000000000000000000000000000000000000809012040000000001000000301000000000000010000000000000000000
...................................................................................................................................AGGGAATAGTTGCTGTGCTGTACTG.........................................................................................................................................................25130.00300000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT..................................................................................................................21329.67890000000310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020004153002000000000000000000000000000000000000000102000000000000057400000000000000000110000000000010010000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG..................................................................................................................22325.007500001082812500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000204000000000000000000000000000000000000000000000100000000000009400000000000000000000000000000000100000000
...................................................................................................................................AGGGAATAGTTGCTGTGCTGTG............................................................................................................................................................22125.0025000000100000000000000000000000000000000000000000000000000000000000000000000000000801040000000000000001000000000100000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000000000000000000000000000000
.....................................................................................................................................GGAATAGTTGCTGTGCTGTA............................................................................................................................................................20121.0021000000000000000000000000000000000010000000000000000000000000000000000000000000000830050000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....................................................................................................................................GGGAATAGTTGCTGTGCTG..............................................................................................................................................................19120.0020000000000000000000000000000000000040000000000000000000000000000000000000000000000600010000000000000000000001000200300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000
...................................................................................................................................AGGGAATAGTTGCTGTGCTGTAAG..........................................................................................................................................................24120.00200000000000000000000000000000000000000000000000000000000000000000000000000000000002000100000000000000000000000001003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013000000000000000000000000000000000000000000
......................................................................................................................................GAATAGTTGCTGTGCTGTA............................................................................................................................................................19118.00180000000000000000000000000000000000000000000000000000000000000000000000000000000001000210000000000000000000000000001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTA...................................................................................................................21316.6750000010515131000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000004000000000000000000000000000000001000000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTC...................................................................................................................21313.67410000202427000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000015700000000000000000000000000000000000000000
...................................................................................................................................AGGGAATAGTTGCTGTGCTGTAT...........................................................................................................................................................23113.0013000000010000000000000000000000000000000000000000000000000000000000000000000000000500010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000
droSim2
--TCATC-AAGGAAAATGA-------------------------------------AAGCCA-AGTTGGCAGCTTACT-AA---------------ACTTAA-----------TCACAGCCTTTAAAGTAGAGGGAATAGTTGCTGTGCTGTAAGTTTATAT-ACCGTATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAG-GCATTTTACATCATTAT--------------------------------------------------------------------------TTAATT----TASizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT..................................................................................................................223816.00244800797972722282537553601315000
...................................................................................................................................AGGGAATAGTTGCTGTGCTGTA............................................................................................................................................................221453.0045312421000303801500000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTT...................................................................................................................213162.6748810811199451247312154104000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG.................................................................................................................23266.0013200851024018751000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTT.....................................................................................................................19361.3318400212713562641000000
...................................................................................................................................AGGGAATAGTTGCTGTGCTGTAA...........................................................................................................................................................23160.0060005700000101100000
...................................................................................................................................AGGGAATAGTTGCTGTGCTG..............................................................................................................................................................20159.0059005400000000500000
...................................................................................................................................AGGGAATAGTTGCTGTGCTGT.............................................................................................................................................................21151.0051004000000710300000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA.................................................................................................................23350.671520001009061000000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTT....................................................................................................................20350.671520033123571614952001000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA................................................................................................................24343.331300000007852000000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCT......................................................................................................................18339.001170000610514001000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGT................................................................................................................24138.00380021200128130000000
...................................................................................................................................AGGGAATAGTTGCTGTGC................................................................................................................................................................18120.0020002000000000000000
....................................................................................................................................................................................GTGGCTGTTCTTTTT..................................................................................................................15318.67560000000027281000000
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT..................................................................................................................21318.3355000550000000000000
....................................................................................................................................GGGAATAGTTGCTGTGCTGTA............................................................................................................................................................21116.0016001500000000100000
.............................................................................................................................................................................TATCACAGTGGCTGT.........................................................................................................................15315.00450000000012302010000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAA.................................................................................................................23313.33400000002119000000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAAA................................................................................................................24312.67380000002117000000000
...................................................................................................................................AGGGAATAGTTGCTGTGCTGTAAA..........................................................................................................................................................24111.0011001000000000100000
...................................................................................................................................AGGGAATAGTTGCTGTGCTGG.............................................................................................................................................................21110.0010001000000000000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA..................................................................................................................2237.3322000000128101000000
...................................................................................................................................AGGGAATAGTTGCTGTGCTGC.............................................................................................................................................................2117.00700700000000000000
....................................................................................................................................................................................GTGGCTGTTCTTTTTGT................................................................................................................1716.00600000000330000000
......................................................................................................................................GAATAGTTGCTGTGCTGTA............................................................................................................................................................1915.00500500000000000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGTAA..............................................................................................................2613.00300000021000000000
...................................................................................................................................AGGGAATAGTTGCTGTGCTGTT............................................................................................................................................................2213.00300300000000000000
...................................................................................................................................AGGGAATAGTTGCTGTGCTGTAC...........................................................................................................................................................2313.00300300000000000000
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTT...................................................................................................................2032.67800053000000000000
.............................................................................................................................................................................TATCACAGTGGCTGTT........................................................................................................................1632.67800000010052000000
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG.................................................................................................................2222.50500040001000000000
...................................................................................................................................AGGGAATAGTTGCTGTGG................................................................................................................................................................1812.00200200000000000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGTA...............................................................................................................2512.00200000011000000000
...............................................................................................................................................................................TCACAGTGGCTGTTCTTTTT..................................................................................................................2031.33400030010000000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTA...................................................................................................................2131.33400000022000000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGTT...............................................................................................................2521.00200000020000000000
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTGT................................................................................................................2311.00100010000000000000
....................................................................................................................................GGGAATAGTTGCTGTGCTGTAA...........................................................................................................................................................2211.00100100000000000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGA................................................................................................................2421.00200000011000000000
....................................................................................................................................GGGAATAGTTGCTGTGCTG..............................................................................................................................................................1911.00100000000000100000
....................................................................................................................................GGGAATAGTTGCTGTGCTGTT............................................................................................................................................................2111.00100100000000000000
.......................................................................................................................................................................TATCTATATCACAGTGGCTGTT........................................................................................................................2211.00100100000000000000
...................................................................................................................................AGGGAATAGTTGCTGTGCT...............................................................................................................................................................1911.00100000000100000000
....................................................................................................................................................................................GTGGCTGTTCTTTTTG.................................................................................................................1621.00200000000020000000
................................................................................................................................TAGAGGGAATAGTTGCTGTGCT...............................................................................................................................................................2211.00100000000000100000
...................................................................................................................................AGGGAATAGTTGCTGTGCTGTG............................................................................................................................................................2211.00100100000000000000
........................................................................................................................................ATAGTTGCTGTGCTGTAA...........................................................................................................................................................1811.00100100000000000000
.....................................................................................................................................................................................TGGCTGTTCTTTTTGT................................................................................................................1621.00200000000020000000
.........................................................................................................................................................AGTTTATAT-ACCGTATCTA........................................................................................................................................1911.00100000000010000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC..................................................................................................................2230.67200010010000000000
.................................................................................................................................................................................ACAGTGGCTGTTCTTTTT..................................................................................................................1830.67200010010000000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTC....................................................................................................................2030.67200200000000000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTG...................................................................................................................2130.67200020000000000000
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTA.................................................................................................................2230.67200000002000000000
droSec2
--TCATC-AAGGAAAATTA--------------------------------------AGCCA-AGTTGGCAGCTTACT-AA---------------ACTTAA-----------TCACAGCCTTTAAAGTAGAGGGAATAGTTGCTGTGCTGTAAGTTAATAT-ACCATATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAG-GCATTTTACATCATTATT--TA-----------ATT---------------------------------------------------TACTTTTTTT----TGSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT..................................................................................................................22327140.338142117131478922772
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTT...................................................................................................................2138065.33241962271023821138
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG.................................................................................................................2323579.5071591011697978
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTT....................................................................................................................2031417.004251233419035
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGT................................................................................................................2411338.001338390127029
.............................................................................................................................................................................TATCACAGTGGCTGTTCTT.....................................................................................................................193259.677793075719
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA.................................................................................................................233126.33379203689
.................................................................................................................................................................................ACAGTGGCTGTTCTTTTT..................................................................................................................183112.00336003342
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT..................................................................................................................21392.0027614701281
...................................................................................................................................AGGGAATAGTTGCTGTGCTGTA............................................................................................................................................................22171.007120690
.............................................................................................................................................................................TATCACAGTGGCTGTTCT......................................................................................................................18367.33202101965
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGA................................................................................................................24254.50109101080
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA..................................................................................................................22332.339720941
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC..................................................................................................................22329.008710851
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG.................................................................................................................22222.5045160290
...............................................................................................................................................................................TCACAGTGGCTGTTCTTTTT..................................................................................................................20319.6759100481
.................................................................................................................................................................................ACAGTGGCTGTTCTTTTTG.................................................................................................................19216.503300330
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA................................................................................................................24314.004200411
.................................................................................................................................................................................ACAGTGGCTGTTCTTTTTGT................................................................................................................20113.001300130
...................................................................................................................................AGGGAATAGTTGCTGTGCTG..............................................................................................................................................................20112.001210101
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTGT................................................................................................................23112.00124080
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTT...................................................................................................................20311.3334230110
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC.................................................................................................................23311.003310320
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGTT...............................................................................................................25210.002000191
...................................................................................................................................AGGGAATAGTTGCTGTGCTGT.............................................................................................................................................................2119.0090090
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG..................................................................................................................2237.332220200
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGTA...............................................................................................................2517.0070061
................................................................................................................................................................................CACAGTGGCTGTTCTTTTT..................................................................................................................1936.331920170
...............................................................................................................................................................................TCACAGTGGCTGTTCTTTT...................................................................................................................1935.331620140
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC................................................................................................................2425.001000100
...............................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGT................................................................................................................2215.0051040
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTA...................................................................................................................2134.331300130
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTC...................................................................................................................2133.671100110
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAA.................................................................................................................2333.331000100
................................................................................................................................................................................CACAGTGGCTGTTCTTTT...................................................................................................................1832.3371060
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTT....................................................................................................................1932.3375020
....................................................................................................................................GGGAATAGTTGCTGTGCTGTA............................................................................................................................................................2112.0020011
...................................................................................................................................AGGGAATAGTTGCTGTGCT...............................................................................................................................................................1912.0020020
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTG...................................................................................................................2132.0062040
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTA....................................................................................................................2031.0030030
................................................................................................................................................................................CACAGTGGCTGTTCTTTTTG.................................................................................................................2021.0021010
.................................................................................................................................................................................ACAGTGGCTGTTCTTTTTGTA...............................................................................................................2111.0010010
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTA.................................................................................................................2231.0030030
................................................................................................................................TAGAGGGAATAGTTGCTGTGC................................................................................................................................................................2111.0010010
...............................................................................................................................................................................TCACAGTGGCTGTTCTTTTTG.................................................................................................................2121.0021010
...................................................................................................................................................................................AGTGGCTGTTCTTTTTGT................................................................................................................1811.0010001
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTC....................................................................................................................2031.0030021
droYak3
--TCATC-AAGGGAAATGA-------------------------------------AAGCCAAAGTCGGCATCTCACT-AA---------------GTTTAA-----------TCACAGCCTTTAACGTAGAGGGAATAGTTGCTGTGCTGTAAGTTAATAA-CAAATATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CTAACATCATTAAT--AA------------TT----TGT--------------------------------------------TGC-TTTTTT----TGSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT..................................................................................................................22388528.672655860234265335500120000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTT...................................................................................................................21315870.00476100634753810080000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC..................................................................................................................2232566.67770000770000000000
...................................................................................................................................AGGGAATAGTTGCTGTGCTGTA............................................................................................................................................................2211641.001641101583570000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTT....................................................................................................................2031006.673020015300310010000
...................................................................................................................................AGGGAATAGTTGCTGTGCTGT.............................................................................................................................................................211363.0036300348150000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTC...................................................................................................................213276.008280082800000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG.................................................................................................................232209.004180241600000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC.................................................................................................................233165.004950149400000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTC....................................................................................................................203138.334150041500000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGT................................................................................................................241135.001350113400000000
...................................................................................................................................AGGGAATAGTTGCTGTGCTGC.............................................................................................................................................................211131.001310013100000000
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT..................................................................................................................21392.002760926700000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA.................................................................................................................23390.332710226900000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTT.....................................................................................................................19362.001860218400000000
...................................................................................................................................AGGGAATAGTTGCTGTGCTG..............................................................................................................................................................20152.0052004750000000
.................................................................................................................................................................................ACAGTGGCTGTTCTTTTT..................................................................................................................18347.001410114000000000
....................................................................................................................................GGGAATAGTTGCTGTGCTGTA............................................................................................................................................................21146.0046004240000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA..................................................................................................................22331.3394009400000000
...............................................................................................................................................................................TCACAGTGGCTGTTCTTTTT..................................................................................................................20322.3367006700000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC................................................................................................................24221.5043004300000000
................................................................................................................................................................................CACAGTGGCTGTTCTTTTT..................................................................................................................19321.0063016200000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTG...................................................................................................................21316.6750005000000000
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTT...................................................................................................................20312.6738023600000000
...................................................................................................................................AGGGAATAGTTGCTGTGCTGTT............................................................................................................................................................22112.0012001020000000
...................................................................................................................................AGGGAATAGTTGCTGTGCT...............................................................................................................................................................19110.001000910000000
...................................................................................................................................AGGGAATAGTTGCTGTGCTGTAA...........................................................................................................................................................2319.00900810000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCT......................................................................................................................1837.3322012100000000
...................................................................................................................................AGGGAATAGTTGCTGTGC................................................................................................................................................................1817.00700700000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG..................................................................................................................2235.6717001700000000
............................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT...................................................................................................................2235.6717001700000000
...................................................................................................................................AGGGAATAGTTGCTGTGCTGTC............................................................................................................................................................2215.00500500000000
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTC..................................................................................................................2134.6714001400000000
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG.................................................................................................................2224.50900900000000
....................................................................................................................................GGGAATAGTTGCTGTGCTGT.............................................................................................................................................................2014.00400400000000
...................................................................................................................................AGGGAATAGTTGCTGTGCC...............................................................................................................................................................1913.00300300000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTGC..................................................................................................................2233.00900900000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTC.....................................................................................................................1932.67800800000000
................................................................................................................................................................................CACAGTGGCTGTTCTTTT...................................................................................................................1832.67800800000000
...............................................................................................................................................................................TCACAGTGGCTGTTCTTTT...................................................................................................................1932.33701600000000
droEre2
---CATCAATGGGAAATGA-------------------------------------AAGCCAAAGTTGCCAGCTTACT-TA---------------GCTAAA-----------TCGCAGCCTTTAAAGTAGAGGGAATAGTTGCCGTGCTGTAAGTTAATAT-ATCATATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CTAACATCATCATT--T-----------TGT----------------------------------------------------TGCCTTATTT----TGSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT..................................................................................................................22310965.6732897490027970056160
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTT...................................................................................................................2132527.677583713686301510
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC..................................................................................................................223198.00594958500000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTT....................................................................................................................203195.675877550501240
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT..................................................................................................................213131.673953702500000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG.................................................................................................................232114.002284518200100
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGT................................................................................................................24182.0082166600000
...................................................................................................................................AGGGAATAGTTGCCGTGCTGTA............................................................................................................................................................22128.002821808000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTC...................................................................................................................21326.007817700000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC.................................................................................................................23319.005715600000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA.................................................................................................................23318.6756163800020
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTT...................................................................................................................20317.3352411100000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTC....................................................................................................................20316.334904801000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTT.....................................................................................................................19314.3343103001110
...............................................................................................................................................................................TCACAGTGGCTGTTCTTTTT..................................................................................................................20310.673223900000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC................................................................................................................2425.501101100000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA..................................................................................................................2235.331661000000
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG.................................................................................................................2222.5052300000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTG...................................................................................................................2132.3374300000
................................................................................................................................................................................CACAGTGGCTGTTCTTTTT..................................................................................................................1932.0061500000
...............................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGT................................................................................................................2212.0021100000
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTT....................................................................................................................1932.0066000000
...................................................................................................................................AGGGAATAGTTGCCGTGCTGT.............................................................................................................................................................2112.0020101000
...................................................................................................................................AGGGAATAGTTGCCGTGCTGC.............................................................................................................................................................2112.0020200000
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTGT................................................................................................................2312.0021100000
....................................................................................................................................GGGAATAGTTGCCGTGCTGTA............................................................................................................................................................2112.0020200000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCC................................................................................................................2431.6750500000
.................................................................................................................................................................................ACAGTGGCTGTTCTTTTT..................................................................................................................1831.3340400000
............................................................................................................................................................................ATATCACAGTGGCTGTTCTTTTT..................................................................................................................2331.3342200000
............................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT...................................................................................................................2231.3341300000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTA...................................................................................................................2131.0030300000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTCC..................................................................................................................2231.0030300000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGTA...............................................................................................................2511.0011000000
.................................................................................................................................AGAGGGAATAGTTGCCGTGCT...............................................................................................................................................................2111.0010100000
.............................................................................................................................................................................TATCACAGTGGCTGTTCT......................................................................................................................1831.0032100000
....................................................................................................................................GGGAATAGTTGCCGTGCTGT.............................................................................................................................................................2011.0011000000
...............................................................................................................................................................................TCACAGTGGCTGTTCTTTT...................................................................................................................1930.6720200000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTCC.................................................................................................................2330.6720200000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG..................................................................................................................2230.6722000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA................................................................................................................2430.6722000000
................................................................................................................................................................................CACAGTGGCTGTTCTTTT...................................................................................................................1830.6720200000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTACC.................................................................................................................2330.6720200000
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTG..................................................................................................................2130.6722000000
.............................................................................................................................................................................TATCACAGTGGCTGTTCTTTGC..................................................................................................................2230.3310100000
..............................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTA.................................................................................................................2230.3311000000

Generated: 10/20/2015 at 10:15 PM