ID:

dpe-mir-33

 Coordinate:

scaffold_47:414007-414096 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intron

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-35.2

Flybase annnotation

intron [Dper\GL15732-in]; utr5 [utr5_plus_8693]; pre_miRNA [Dper\mir-33-RM]; miRNA [Dper\miR-33-RA]

No Repeatable elements found

Sense Strand Reads

GAGAGAGTGTAACAATCTGCATTTGATCAAAAAACCAAACCAAACACTCCCGGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTCCATCTTGATTTCAGGCAATACAACTGCAGTGCAAGCTCTGTGCATTTCATAAATCAACGCCGTCCAATGTCGCTGGTCCAGTTTCAGTCCCTGCCCCGG

***************************************************.((((((.((((.((.(((((((((((...((((((((.............))))))))...)))))))))))..)).))))))))))....*********************************************** 		Read size # Mismatch Hit Count Total Norm Total M042

female body

 V057

head

 M021

embryo

 V111

male body		 V050

head

 V042

embryo
..................................................................GTGCATTGTAGTCGCATTGTC....................................................................................................... 21 0 1 62345.00 62345 26126 11689 12410 6848 4901 371
..................................................................GTGCATTGTAGTCGCATTGT........................................................................................................ 20 0 1 16285.00 16285 5532 5146 82 4137 1311 77
..................................................................GTGCATTGTAGTCGCATTGTCA...................................................................................................... 22 1 1 2572.00 2572 2015 177 66 103 73 138
..................................................................GTGCATTGTAGTCGCATTGTCT...................................................................................................... 22 0 1 2464.00 2464 1483 425 66 369 109 12
..................................................................GTGCATTGTAGTCGCATTG......................................................................................................... 19 0 1 2199.00 2199 1735 197 35 146 68 18
...................................................................TGCATTGTAGTCGCATTGTC....................................................................................................... 20 0 1 1951.00 1951 1919 5 17 5 5 0
..................................................................GTGCATTGGAGTCGCATTGTC....................................................................................................... 21 1 1 1136.00 1136 1064 62 5 5 0 0
..........................................................................................................CAATACAACTGCAGTGCAAGCT.............................................................. 22 0 1 626.00 626 304 126 12 73 81 30
..................................................................GTGCATTGAAGTCGCATTGTC....................................................................................................... 21 1 1 491.00 491 438 31 1 13 8 0
..................................................................GTGCATTGTAGTCGCATTGTT....................................................................................................... 21 1 1 435.00 435 139 133 4 128 31 0
...................................................................TGCATTGTAGTCGCATTGT........................................................................................................ 19 0 1 418.00 418 414 2 0 1 1 0
..................................................................GTGCATTGTAGTCGCATTGTA....................................................................................................... 21 1 1 340.00 340 177 42 64 29 19 9
..................................................................GGGCATTGTAGTCGCATTGTC....................................................................................................... 21 1 1 310.00 310 14 256 8 2 29 1
..................................................................GTGCATTGGAGTCGCATTGT........................................................................................................ 20 1 1 290.00 290 244 37 0 7 2 0
..................................................................GTGCATTGTAGTCGCATTGTCAA..................................................................................................... 23 2 1 286.00 286 222 19 1 11 11 22
..................................................................GTGCATTGCAGTCGCATTGTC....................................................................................................... 21 1 1 263.00 263 204 44 6 6 3 0
..................................................................GTGCATTGTAGTCGCATTGTCC...................................................................................................... 22 1 1 248.00 248 155 46 5 11 25 6
..........................................................................................................CAATACAACTGCAGTGCAAGC............................................................... 21 0 1 244.00 244 164 37 6 12 21 4
..................................................................GTGCATTGTAGTCGCATT.......................................................................................................... 18 0 1 228.00 228 121 82 11 3 11 0
..................................................................GTGCATTGTAGTCGCATTTTC....................................................................................................... 21 1 1 223.00 223 16 162 1 0 43 1
....................................................................GCATTGTAGTCGCATTGTC....................................................................................................... 19 0 1 205.00 205 103 3 92 6 0 1
..................................................................GCGCATTGTAGTCGCATTGTC....................................................................................................... 21 1 1 180.00 180 20 121 9 13 15 2
..................................................................GTGCATTGTAGCCGCATTGTC....................................................................................................... 21 1 1 172.00 172 10 111 15 14 22 0
..................................................................GTGCATTGTAGTCGCATTGTCTG..................................................................................................... 23 0 1 167.00 167 100 27 2 24 12 2
..................................................................GTGCATTGTAGTCGCATTGCC....................................................................................................... 21 1 1 159.00 159 8 102 16 3 30 0
...................................................................TGCATTGTAGTCGCATTG......................................................................................................... 18 0 1 149.00 149 149 0 0 0 0 0
..................................................................GAGCATTGTAGTCGCATTGTC....................................................................................................... 21 1 1 149.00 149 18 117 3 1 9 1
...................................................................TGCATTGTAGTCGCATTGTCA...................................................................................................... 21 1 1 147.00 147 147 0 0 0 0 0
..................................................................TTGCATTGTAGTCGCATTGTC....................................................................................................... 21 1 1 137.00 137 50 13 69 0 5 0
..................................................................GTGCATTGTAGTCGCATTGTAA...................................................................................................... 22 2 1 131.00 131 70 30 3 14 10 4
..................................................................GGGCATTGTAGTCGCATTGT........................................................................................................ 20 1 1 121.00 121 7 108 0 0 5 1
..................................................................GTGCATTGAAGTCGCATTGT........................................................................................................ 20 1 1 120.00 120 100 14 0 5 1 0
...................................................................TGCATTGTAGTCGCATTGTCT...................................................................................................... 21 0 1 110.00 110 110 0 0 0 0 0
..................................................................GTGCATTGTAGTCGCCTTGTC....................................................................................................... 21 1 1 99.00 99 0 87 0 0 9 3
.......................................................................................TGTCCATCTTGATTTCAGG.................................................................................... 19 0 1 94.00 94 61 3 3 0 2 25
..................................................................GTGCATTGTAGGCGCATTGTC....................................................................................................... 21 1 1 88.00 88 0 82 2 0 4 0
..................................................................GTGCATTGTAGTAGCATTGTC....................................................................................................... 21 1 1 86.00 86 7 33 39 0 6 1
..................................................................GTGCATTGTAGTCTCATTGTC....................................................................................................... 21 1 1 78.00 78 11 29 19 9 10 0
..................................................................GTGCATTGCAGTCGCATTGT........................................................................................................ 20 1 1 77.00 77 45 27 0 4 1 0
..................................................................GTGCATTGGAGTCGCATTGTCA...................................................................................................... 22 2 1 76.00 76 75 1 0 0 0 0
..................................................................GTGCATTGTAGTCGCATTGTCG...................................................................................................... 22 1 1 75.00 75 27 33 4 7 3 1
..................................................................ATGCATTGTAGTCGCATTGTC....................................................................................................... 21 1 1 75.00 75 31 21 11 2 9 1
...................................................................TGCATTGTGGTCGCATTGTC....................................................................................................... 20 1 1 75.00 75 75 0 0 0 0 0
..................................................................GTGCATTGGAGTCGCATTGTCT...................................................................................................... 22 1 1 70.00 70 66 4 0 0 0 0
..................................................................GTGCATTGTAGTCGCATTGGC....................................................................................................... 21 1 1 69.00 69 10 45 9 1 4 0
..................................................................GTGCATTGTAGTCGCATTGTAAA..................................................................................................... 23 3 1 68.00 68 50 8 3 4 1 2
..................................................................GTGCATTGTAGTCGCATTCTC....................................................................................................... 21 1 1 65.00 65 5 48 0 0 12 0
..................................................................GAGCATTGTAGTCGCATTGT........................................................................................................ 20 1 1 64.00 64 4 51 0 4 5 0
..................................................................GTGCATTGTAGTCCCATTGTC....................................................................................................... 21 1 1 60.00 60 14 31 11 1 3 0
..................................................................GTGCGTTGTAGTCGCATTGTC....................................................................................................... 21 1 1 60.00 60 8 42 0 1 8 1
..................................................................GTGCATTGTAGTCGCATTGC........................................................................................................ 20 1 1 57.00 57 1 38 0 7 10 1
.................................................................CGTGCATTGTAGTCGCATTGTC....................................................................................................... 22 1 1 54.00 54 21 20 4 0 8 1
..................................................................GTGCACTGTAGTCGCATTGTC....................................................................................................... 21 1 1 53.00 53 7 12 8 7 18 1
..................................................................GCGCATTGTAGTCGCATTGT........................................................................................................ 20 1 1 52.00 52 2 44 0 4 2 0
..................................................................GTGCATTGTAGCCGCATTGT........................................................................................................ 20 1 1 52.00 52 2 44 1 3 2 0
..................................................................GTGCATTGTAGTCGCATTGAC....................................................................................................... 21 1 1 51.00 51 1 5 40 2 3 0
..................................................................GTGCATTGTAGTCGAATTGTC....................................................................................................... 21 1 1 49.00 49 3 42 0 2 2 0
..................................................................GTGCATTGTAGTTGCATTGTC....................................................................................................... 21 1 1 49.00 49 5 30 5 2 7 0
..................................................................GTGCATTGTAGTCGCATTTT........................................................................................................ 20 1 1 48.00 48 2 39 0 0 7 0
..................................................................GTGCAGTGTAGTCGCATTGTC....................................................................................................... 21 1 1 48.00 48 0 26 0 0 21 1
..................................................................GTTCATTGTAGTCGCATTGTC....................................................................................................... 21 1 1 47.00 47 12 11 9 13 2 0
..................................................................GTGCATTGTAGTCGCCTTGT........................................................................................................ 20 1 1 47.00 47 0 43 0 0 4 0
..................................................................GTGCATTGTAGTCACATTGTC....................................................................................................... 21 1 1 47.00 47 5 25 2 7 8 0
..................................................................GTGCATTGTAGTCGCGTTGTC....................................................................................................... 21 1 1 43.00 43 3 23 3 6 5 3
..................................................................GTGCATTGTAGTCGCTTTGTC....................................................................................................... 21 1 1 42.00 42 4 23 0 11 3 1
..................................................................GTCCATTGTAGTCGCATTGTC....................................................................................................... 21 1 1 42.00 42 20 6 9 7 0 0
..................................................................GTGCATTGTAGTCGTATTGTC....................................................................................................... 21 1 1 40.00 40 1 11 2 24 2 0
..................................................................GTGCATTGTAGGCGCATTGT........................................................................................................ 20 1 1 40.00 40 1 37 0 1 1 0
..................................................................CTGCATTGTAGTCGCATTGTC....................................................................................................... 21 1 1 40.00 40 12 12 12 2 2 0
..................................................................GTGCATTGTAGTGGCATTGTC....................................................................................................... 21 1 1 39.00 39 2 5 27 1 4 0
..................................................................GTGCATTGTGGTCGCATTGTC....................................................................................................... 21 1 1 38.00 38 6 14 5 9 3 1
..................................................................GTGCATTGTACTCGCATTGTC....................................................................................................... 21 1 1 37.00 37 19 14 1 2 1 0
..................................................................GTGCATTGTATTCGCATTGTC....................................................................................................... 21 1 1 37.00 37 19 11 2 4 1 0
..................................................................GTGCATTGTAGTCGCATTGA........................................................................................................ 20 1 1 35.00 35 21 4 2 4 2 2
...........................................................................................................AATACAACTGCAGTGCAAGCT.............................................................. 21 0 1 35.00 35 33 2 0 0 0 0
..................................................................GTGCATTGTAGTCGCACTGTC....................................................................................................... 21 1 1 35.00 35 7 22 0 1 5 0
..................................................................GTGTATTGTAGTCGCATTGTC....................................................................................................... 21 1 1 34.00 34 4 20 3 5 2 0
..................................................................GTGCATTGTAGTCTCATTGT........................................................................................................ 20 1 1 34.00 34 5 19 0 6 3 1
..................................................................GTGCATTGTAGTCGCATTATC....................................................................................................... 21 1 1 33.00 33 5 13 0 3 12 0
..................................................................GTACATTGTAGTCGCATTGTC....................................................................................................... 21 1 1 33.00 33 10 10 7 3 3 0
..................................................................GTGCATTGTAGTCGCATCGTC....................................................................................................... 21 1 1 32.00 32 2 17 2 6 3 2
..................................................................GTGCATTGAAGTCGCATTGTCA...................................................................................................... 22 2 1 31.00 31 31 0 0 0 0 0
..................................................................GTGCCTTGTAGTCGCATTGTC....................................................................................................... 21 1 1 30.00 30 1 27 0 0 2 0
..................................................................GTGCATTGTAGTCGCATTGTCAAA.................................................................................................... 24 3 1 30.00 30 26 1 0 0 0 3
..........................................................................................................CAATGCAACTGCAGTGCAAGCT.............................................................. 22 1 1 30.00 30 5 12 0 5 8 0
..................................................................GTGCATTGTAGTCGCTTTGT........................................................................................................ 20 1 1 30.00 30 1 17 0 12 0 0
..................................................................GTGCATCGTAGTCGCATTGTC....................................................................................................... 21 1 1 29.00 29 6 14 3 1 5 0
..................................................................GTGCATTGTAGTCGCATTCT........................................................................................................ 20 1 1 29.00 29 3 22 0 1 3 0
..................................................................GTGCATTGTCGTCGCATTGTC....................................................................................................... 21 1 1 29.00 29 0 19 1 0 8 1
..................................................................GTGCACTGTAGTCGCATTGT........................................................................................................ 20 1 1 28.00 28 3 12 0 5 8 0
..................................................................GGGCATTGTAGTCGCCTTGTC....................................................................................................... 21 2 1 28.00 28 0 27 0 0 1 0
..........................................................................................................CAATACAACTGCAGTGCAAG................................................................ 20 0 1 27.00 27 19 3 0 4 0 1
..................................................................GTGCATTGTAATCGCATTGTC....................................................................................................... 21 1 1 27.00 27 8 10 5 4 0 0
..................................................................GTGCATTGTAGTCGCATTGG........................................................................................................ 20 1 1 27.00 27 7 12 7 1 0 0
..................................................................GTGCATTGTAGACGCATTGTC....................................................................................................... 21 1 1 26.00 26 3 18 4 1 0 0
...................................................................GTCATTGTAGTCGCATTGTC....................................................................................................... 20 2 1 25.00 25 13 0 4 8 0 0
..................................................................GTGCATTGTAGTCGTATTGT........................................................................................................ 20 1 1 24.00 24 2 3 0 17 2 0
..................................................................GTGCATTGTAGTCGCATGGTC....................................................................................................... 21 1 1 24.00 24 0 21 0 0 3 0
...................................................................TGCATTGTAGTCGCATTGTCAA..................................................................................................... 22 2 1 24.00 24 23 1 0 0 0 0
....................................................................GCATTGTAGTCGCATTGT........................................................................................................ 18 0 1 24.00 24 23 0 1 0 0 0
..................................................................GTGCGTTGTAGTCGCATTGT........................................................................................................ 20 1 1 23.00 23 1 17 0 4 1 0
..................................................................GTGCATTCTAGTCGCATTGTC....................................................................................................... 21 1 1 22.00 22 10 6 4 1 1 0
..................................................................GTGCTTTGTAGTCGCATTGTC....................................................................................................... 21 1 1 21.00 21 3 12 2 2 1 1
..................................................................GTGCATTTTAGTCGCATTGTC....................................................................................................... 21 1 1 21.00 21 9 7 2 2 1 0
..................................................................GTGCATTGTAGTAGCATTGT........................................................................................................ 20 1 1 20.00 20 2 15 0 0 2 1
..................................................................GTGCATTGTAGTCGCATTGTTT...................................................................................................... 22 1 1 20.00 20 10 4 0 5 1 0
.................................................................GGTGCATTGTAGTCGCATTGTC....................................................................................................... 22 0 1 20.00 20 20 0 0 0 0 0
..................................................................GTGCAATGTAGTCGCATTGTC....................................................................................................... 21 1 1 19.00 19 1 4 1 1 12 0
..................................................................GTGCATTATAGTCGCATTGTC....................................................................................................... 21 1 1 19.00 19 4 3 2 5 5 0
..................................................................GTGCATTGTAGTCGCATTGTG....................................................................................................... 21 1 1 19.00 19 7 10 1 1 0 0
..................................................................GTGCATTGTAGTCGCATTGTCTT..................................................................................................... 23 1 1 19.00 19 13 3 0 3 0 0
..................................................................ATGCATTGTAGTCGCATTGT........................................................................................................ 20 1 1 19.00 19 8 8 0 0 3 0
..................................................................GTGCAGTGTAGTCGCATTGT........................................................................................................ 20 1 1 18.00 18 0 12 0 0 6 0
..................................................................TTGCATTGTAGTCGCATTGT........................................................................................................ 20 1 1 18.00 18 8 4 0 3 3 0
..................................................................GTGCATTGTAGTCGAATTGT........................................................................................................ 20 1 1 17.00 17 1 12 0 3 1 0
..................................................................GTGAATTGTAGTCGCATTGTC....................................................................................................... 21 1 1 17.00 17 1 13 0 0 3 0
..................................................................GTGGATTGTAGTCGCATTGTC....................................................................................................... 21 1 1 17.00 17 1 12 1 2 0 1
...................................................................TGCATTGTAGTCGCATTGTA....................................................................................................... 20 1 1 17.00 17 17 0 0 0 0 0
..................................................................GTGCATTGAAGTCGCATTGTCT...................................................................................................... 22 1 1 16.00 16 12 1 0 2 1 0
....................................................................GCATTGTAGTCGCATTGTCA...................................................................................................... 20 1 1 16.00 16 16 0 0 0 0 0
..................................................................GAGCATTGTAGGCGCATTGTC....................................................................................................... 21 2 1 16.00 16 0 13 0 0 3 0
...................................................................TGCATTGTTGTCGCATTGTC....................................................................................................... 20 1 1 16.00 16 16 0 0 0 0 0
...................................................................TGCATTGTCGTCGCATTGTC....................................................................................................... 20 1 1 16.00 16 16 0 0 0 0 0
.................................................................CGTGCATTGTAGTCGCATTGT........................................................................................................ 21 1 1 16.00 16 7 8 0 0 1 0
..................................................................GTTCATTGTAGTCGCATTGT........................................................................................................ 20 1 1 15.00 15 3 3 0 9 0 0
..................................................................GTGCATTGTAGTCGCGTTGT........................................................................................................ 20 1 1 15.00 15 0 12 0 2 1 0
...................................................................TGCATTGTAGTCGCATTGTCC...................................................................................................... 21 1 1 14.00 14 14 0 0 0 0 0
..................................................................GTGCCTTGTAGTCGCATTGT........................................................................................................ 20 1 1 14.00 14 0 12 0 0 2 0
..................................................................GGGCATTGAAGTCGCATTGTC....................................................................................................... 21 2 1 13.00 13 0 12 0 0 1 0
..........................................................................................................CAATACAACTGCAGTGCAAGCTT............................................................. 23 1 1 13.00 13 8 3 0 0 2 0
..................................................................GGGCAGTGTAGTCGCATTGTC....................................................................................................... 21 2 1 13.00 13 0 12 0 0 1 0
.................................................................TGTGCATTGTAGTCGCATTGTC....................................................................................................... 22 1 1 13.00 13 13 0 0 0 0 0
.....................................................................CATTGTAGTCGCATTGTC....................................................................................................... 18 0 1 13.00 13 10 1 2 0 0 0
..................................................................GTGCATTGTAGTCCCATTGT........................................................................................................ 20 1 1 13.00 13 1 10 0 1 1 0
..................................................................GTGCATTGCAGTCGCATTGTCA...................................................................................................... 22 2 1 13.00 13 12 1 0 0 0 0
..................................................................GTGCATTGTAGTCGCATCGT........................................................................................................ 20 1 1 12.00 12 1 7 0 2 2 0
..................................................................GTGCATTGTAGTCGCATTT......................................................................................................... 19 1 1 12.00 12 5 6 0 0 1 0
..........................................................................................................CAATACAACTGCAGTGCAA................................................................. 19 0 1 12.00 12 8 4 0 0 0 0
..................................................................GTGCATTGTAGTCGCATGGT........................................................................................................ 20 1 1 12.00 12 0 10 0 1 1 0
..................................................................GTGCATTGCAGCCGCATTGTC....................................................................................................... 21 2 1 12.00 12 0 11 0 0 1 0
..................................................................GTGCATTGTAGTTGCATTGT........................................................................................................ 20 1 1 11.00 11 2 5 0 3 1 0
..................................................................GTGGATTGTAGTCGCATTGT........................................................................................................ 20 1 1 11.00 11 0 9 0 2 0 0
..................................................................GTGCATTGTAGTCACATTGT........................................................................................................ 20 1 1 11.00 11 0 5 0 3 3 0
..................................................................GTGCATTGTAGTCGCATTGCCT...................................................................................................... 22 1 1 11.00 11 3 7 0 1 0 0
..................................................................GTGAATTGTAGTCGCATTGT........................................................................................................ 20 1 1 11.00 11 0 8 0 2 1 0
..................................................................GTGCATTGTGGTCGCATTGT........................................................................................................ 20 1 1 11.00 11 1 6 0 4 0 0
..................................................................GTGCATTGTAGTCGCATTAT........................................................................................................ 20 1 1 10.00 10 1 5 0 3 1 0
..........................................................................................................CAATACAAGTGCAGTGCAAGCT.............................................................. 22 1 1 10.00 10 10 0 0 0 0 0
...................................................................TGCATTGTAGTCGCATTGTCTG..................................................................................................... 22 0 1 10.00 10 10 0 0 0 0 0
..................................................................GTACATTGTAGTCGCATTGT........................................................................................................ 20 1 1 10.00 10 0 7 0 3 0 0
..................................................................GTGCATCGTAGTCGCATTGT........................................................................................................ 20 1 1 10.00 10 2 6 0 1 1 0
..................................................................CTGCATTGTAGTCGCATTGT........................................................................................................ 20 1 1 10.00 10 2 7 1 0 0 0
..................................................................GGGCATTGTAGTCGCCTTGT........................................................................................................ 20 2 1 10.00 10 0 10 0 0 0 0
......................................................................ATTGTAGTCGCATTGTCT...................................................................................................... 18 0 1 10.00 10 0 0 10 0 0 0
..................................................................GTGCATTGTAGTCGCAGTGTC....................................................................................................... 21 1 1 10.00 10 0 8 0 1 1 0
..................................................................GTGTATTGTAGTCGCATTGT........................................................................................................ 20 1 1 10.00 10 0 7 0 2 1 0
..................................................................GTGCATTGTAGTCGCATTGCT....................................................................................................... 21 2 1 9.00 9 0 5 0 0 4 0
..................................................................GTGCATTGTAGTCGCCTTCTC....................................................................................................... 21 2 1 9.00 9 0 9 0 0 0 0
..................................................................GGGCATTGTAGTCGCATTGCC....................................................................................................... 21 2 1 9.00 9 0 8 0 0 1 0
..................................................................GTGCATTGTATTCGCATTGT........................................................................................................ 20 1 1 9.00 9 0 7 0 2 0 0
..................................................................GTGCATTGTAGTCGCATTGTCTGT.................................................................................................... 24 0 1 9.00 9 1 1 0 7 0 0
..................................................................GGGCATTGTAGTCGCATTGTCT...................................................................................................... 22 1 1 9.00 9 1 7 0 0 0 1
..................................................................GGGCATTGTAGTCGCTTTGTC....................................................................................................... 21 2 1 9.00 9 0 9 0 0 0 0
.................................................................AGTGCATTGTAGTCGCATTGTC....................................................................................................... 22 1 1 9.00 9 9 0 0 0 0 0
..................................................................GTGCATTGTACTCGCATTGT........................................................................................................ 20 1 1 9.00 9 1 7 0 0 1 0
..................................................................GTGCATTGTAGACGCATTGT........................................................................................................ 20 1 1 9.00 9 1 8 0 0 0 0
..................................................................GTGCATTGCAGTCGCATTGTCT...................................................................................................... 22 1 1 8.00 8 7 1 0 0 0 0
...................................................................AGCATTGTAGTCGCATTGTC....................................................................................................... 20 1 1 8.00 8 8 0 0 0 0 0
..................................................................GTGCATTGTTGTCGCATTGTC....................................................................................................... 21 1 1 8.00 8 1 4 0 1 2 0
..................................................................GAGCATTGTCGTCGCATTGTC....................................................................................................... 21 2 1 8.00 8 0 6 0 0 2 0
..................................................................GTGCATTGTCGTCGCATTGT........................................................................................................ 20 1 1 8.00 8 0 8 0 0 0 0
...........................................................................................................AATACAACTGCAGTGCAAGC............................................................... 20 0 1 8.00 8 8 0 0 0 0 0
..................................................................GCGCATTGTAGCCGCATTGTC....................................................................................................... 21 2 1 8.00 8 0 6 0 0 2 0
..................................................................GTGCATTGTAGTCACCTTGTC....................................................................................................... 21 2 1 8.00 8 0 7 0 0 1 0
..................................................................GTGCATTGTAGTCGCATAGTC....................................................................................................... 21 1 1 8.00 8 2 4 1 0 1 0
..................................................................GTGCATTGTAGTCGGATTGT........................................................................................................ 20 1 1 8.00 8 0 1 0 5 2 0
..................................................................GTGCATTGGAGTGGCATTGTC....................................................................................................... 21 2 1 8.00 8 8 0 0 0 0 0
..................................................................GTGCATTTTAGTCGCATTGT........................................................................................................ 20 1 1 8.00 8 2 6 0 0 0 0
.........................................................................................................GCAATACAACTGCAGTGCAAGC............................................................... 22 0 1 8.00 8 7 0 0 0 0 1
..................................................................GTGCATTGTAGTCGCATTTTT....................................................................................................... 21 2 1 8.00 8 2 4 0 0 1 1
..................................................................GTGCATTGTAGTCGCATTC......................................................................................................... 19 1 1 8.00 8 8 0 0 0 0 0
..........................................................................................................CAATACAACTTCAGTGCAAGCT.............................................................. 22 1 1 8.00 8 8 0 0 0 0 0
..........................................................................................................CAATACAAATGCAGTGCAAGCT.............................................................. 22 1 1 8.00 8 8 0 0 0 0 0
..................................................................GTGCATTGGAGTCGCATTGTA....................................................................................................... 21 2 1 7.00 7 7 0 0 0 0 0
..........................................................................................................CAATACAAGTGCAGTGCAAGC............................................................... 21 1 1 7.00 7 7 0 0 0 0 0
..................................................................GTGCATTGTAGTCGCACTGT........................................................................................................ 20 1 1 7.00 7 0 4 0 2 1 0
..................................................................GTGCGTTGGAGTCGCATTGTC....................................................................................................... 21 2 1 7.00 7 0 6 0 0 1 0
...................................................................TGCATTGTAGTCGCATTGTT....................................................................................................... 20 1 1 7.00 7 7 0 0 0 0 0
.........................................................................................................GCAATACAACTGCAGTGCAAG................................................................ 21 0 1 7.00 7 6 1 0 0 0 0
..................................................................GTGCATTGGAGTCGCATTGTCAA..................................................................................................... 23 3 1 7.00 7 7 0 0 0 0 0
..................................................................GTCCATTGTAGTCGCATTGT........................................................................................................ 20 1 1 7.00 7 1 6 0 0 0 0
..................................................................GTGCATTGTAGCCGCCTTGTC....................................................................................................... 21 2 1 7.00 7 0 7 0 0 0 0
..................................................................GAGCATTGTAGTCGCATTCTC....................................................................................................... 21 2 1 7.00 7 0 7 0 0 0 0
..................................................................GGGCATTGTAGTCACATTGTC....................................................................................................... 21 2 1 7.00 7 0 7 0 0 0 0
..........................................................................................................CAATACAACTGCAGTGCAAGA............................................................... 21 1 1 7.00 7 2 1 3 0 0 1
..................................................................GCGCATTGTAGTCGCATTGCC....................................................................................................... 21 2 1 7.00 7 0 6 0 0 1 0
..................................................................GTGCATGGTAGTCGCATTGTC....................................................................................................... 21 1 1 7.00 7 0 6 0 1 0 0
..................................................................GTGCATTGGAGTCGCATTGCC....................................................................................................... 21 2 1 7.00 7 0 7 0 0 0 0
..................................................................GAGCATTGTAGTCTCATTGTC....................................................................................................... 21 2 1 7.00 7 0 7 0 0 0 0
..................................................................GTGCATTGTAGTCGCCTTTTC....................................................................................................... 21 2 1 7.00 7 0 5 0 0 2 0
..................................................................TTGCATTGTAGTCGCATTGTCA...................................................................................................... 22 2 1 7.00 7 7 0 0 0 0 0
..................................................................GTGCATTGTAGGCGAATTGTC....................................................................................................... 21 2 1 7.00 7 0 7 0 0 0 0
..................................................................GTGCATTGTAGTCGCATTGTCGT..................................................................................................... 23 2 1 7.00 7 2 1 0 4 0 0
..................................................................GGGCATTGTAGCCGCATTGTC....................................................................................................... 21 2 2 6.00 12 0 9 0 0 3 0
..................................................................GGGCAGTGTAGTCGCATTGT........................................................................................................ 20 2 1 6.00 6 0 6 0 0 0 0
..................................................................GTGCATTGTAGGCGCATTGCC....................................................................................................... 21 2 1 6.00 6 0 6 0 0 0 0
..................................................................GTGCATTGTAGTCGCAATGTC....................................................................................................... 21 1 1 6.00 6 2 2 0 2 0 0
..................................................................GAGCATTGTAGTCGCATTGTCT...................................................................................................... 22 1 1 6.00 6 0 6 0 0 0 0
..........................................................................................................CAATACAACTGCAGTGCAAGCC.............................................................. 22 1 1 6.00 6 2 2 1 1 0 0
..................................................................GAGCATTGGAGTCGCATTGTC....................................................................................................... 21 2 1 6.00 6 0 6 0 0 0 0
..................................................................GTGCATTGTAGTCGCATTTTCT...................................................................................................... 22 1 1 6.00 6 2 3 0 0 1 0
..................................................................GTTCATTGTAGTCGCATTGTCA...................................................................................................... 22 2 1 6.00 6 2 0 0 4 0 0
..................................................................GGGCATTGTAGGCGCATTGTC....................................................................................................... 21 2 2 6.00 12 0 11 0 0 1 0
...................................................................TGCATTGTGGTCGCATTGTCT...................................................................................................... 21 1 1 6.00 6 6 0 0 0 0 0
..................................................................GTGCATTGAAGTCGCATTGTA....................................................................................................... 21 2 1 6.00 6 6 0 0 0 0 0
..................................................................GTGCATTGTAGCCGCTTTGTC....................................................................................................... 21 2 1 6.00 6 0 5 0 0 1 0
..................................................................GAGCATTGTAGTCGCATTGCC....................................................................................................... 21 2 1 5.00 5 0 5 0 0 0 0
..................................................................GAGCATTGTAGTCGCATTTTC....................................................................................................... 21 2 1 5.00 5 0 5 0 0 0 0
..................................................................GCGCATTGTAGTCGCATTGTCT...................................................................................................... 22 1 1 5.00 5 0 3 0 1 1 0
..................................................................GTACATTGTAGTCGCATTGTCT...................................................................................................... 22 1 1 5.00 5 0 4 0 1 0 0
..................................................................GCGCATTGAAGTCGCATTGTC....................................................................................................... 21 2 1 5.00 5 0 5 0 0 0 0
..................................................................GTGCATTGTAGTCGCCTGGT........................................................................................................ 20 2 1 5.00 5 0 4 0 0 1 0
..................................................................GGGCATTGTAGTCGCATTGTCA...................................................................................................... 22 2 1 5.00 5 1 3 0 0 1 0
..................................................................GTGCATTGTAGTCCCATTGCC....................................................................................................... 21 2 1 5.00 5 0 5 0 0 0 0
..................................................................GTGCTTTGTAGTCGCATTGT........................................................................................................ 20 1 1 5.00 5 0 5 0 0 0 0
..................................................................GGGCATTGTAGTCGCATCGTC....................................................................................................... 21 2 1 5.00 5 0 5 0 0 0 0
..................................................................GTGCATTGAAGTCGCATTGTCAA..................................................................................................... 23 3 1 5.00 5 5 0 0 0 0 0
..................................................................GTGCATTGTAGCCGCATTTTC....................................................................................................... 21 2 1 5.00 5 0 3 0 0 1 1
..................................................................GTGCATTGTAGTTGCATTG......................................................................................................... 19 1 1 5.00 5 0 2 0 2 0 1
..................................................................GTGCAGTGGAGTCGCATTGTC....................................................................................................... 21 2 1 5.00 5 0 5 0 0 0 0
..................................................................GGGCATTGTAGTCGCATTGTT....................................................................................................... 21 2 3 5.00 15 0 15 0 0 0 0
..................................................................GTGCATTGTAGTCGGATTGTC....................................................................................................... 21 1 1 5.00 5 0 2 0 2 1 0
..................................................................GTGCATTGTAGTCGCCTTG......................................................................................................... 19 1 1 5.00 5 0 3 0 0 2 0
..................................................................GTGCATTGTAGTCCCATTCTC....................................................................................................... 21 2 1 5.00 5 0 5 0 0 0 0
..................................................................GTGCATTGTAGTCGCCTTGTCT...................................................................................................... 22 1 1 5.00 5 0 5 0 0 0 0
..................................................................GGGCATTGTGGTCGCATTGTC....................................................................................................... 21 2 1 5.00 5 0 5 0 0 0 0
..................................................................GTGCATTGGAGCCGCATTGTC....................................................................................................... 21 2 2 4.50 9 0 9 0 0 0 0
..................................................................GAGCATTGTAGTCGCATTCT........................................................................................................ 20 2 1 4.00 4 0 3 0 0 1 0
..................................................................GTGCATTGTAGTCGCATTGCA....................................................................................................... 21 2 1 4.00 4 0 3 0 0 1 0
..................................................................GTGCATTGTAGTCGCATTGTAG...................................................................................................... 22 2 1 4.00 4 1 2 0 1 0 0
..................................................................GTGCATTGTAGTCGCACTGTCT...................................................................................................... 22 1 1 4.00 4 2 2 0 0 0 0
..................................................................GTGCATTGTAGTCGCATTCTCT...................................................................................................... 22 1 1 4.00 4 2 1 0 0 1 0
..................................................................GTGCATTGGAGGCGCATTGTC....................................................................................................... 21 2 1 4.00 4 0 4 0 0 0 0
...................................................................GTCATTGTAGTCGCATTGTCT...................................................................................................... 21 2 1 4.00 4 2 0 2 0 0 0
..................................................................GTGCATTGTAGTCGCCTGGTC....................................................................................................... 21 2 1 4.00 4 0 4 0 0 0 0
..................................................................GTGCATTGTAGTCGAATTGTCT...................................................................................................... 22 1 1 4.00 4 0 2 0 2 0 0
..................................................................GGGCATTGTAGTCGCATTGTCC...................................................................................................... 22 2 1 4.00 4 0 4 0 0 0 0
....................................................................GCATTGTAGTCGCATTGTCT...................................................................................................... 20 0 1 4.00 4 4 0 0 0 0 0
..................................................................GTGCATTGTAGTGGCATTGT........................................................................................................ 20 1 1 4.00 4 1 3 0 0 0 0
........................................................................................GTCCATCTTGATTTCAGG.................................................................................... 18 0 1 4.00 4 4 0 0 0 0 0
..................................................................TTGCATTGTAGTCGCATTG......................................................................................................... 19 1 1 4.00 4 3 0 0 0 1 0
..................................................................GCGCATTGTAGTCGCATTTTC....................................................................................................... 21 2 1 4.00 4 0 3 0 0 1 0
..................................................................GTGCATTGTCGGCGCATTGTC....................................................................................................... 21 2 1 4.00 4 0 4 0 0 0 0
..................................................................GTGCAGTGTAGTTGCATTGTC....................................................................................................... 21 2 1 4.00 4 0 4 0 0 0 0
..................................................................GAGCATTGTAGTCGCCTTGTC....................................................................................................... 21 2 1 4.00 4 0 4 0 0 0 0
..................................................................GTGCATTGTAGCCGCATTCTC....................................................................................................... 21 2 1 4.00 4 0 3 0 0 1 0
..................................................................GTGCATTGTAGTCGCATTTTCA...................................................................................................... 22 2 1 4.00 4 0 3 0 0 0 1
..................................................................GTGCATTGTAGTCGCCTTGTT....................................................................................................... 21 2 1 4.00 4 0 4 0 0 0 0
..................................................................GTGCATTGGAGTCGCATTGTCC...................................................................................................... 22 2 1 4.00 4 4 0 0 0 0 0
..................................................................GTGCCTTGTAGTCGCATTTTC....................................................................................................... 21 2 1 4.00 4 0 3 0 0 1 0
..................................................................GTGCGTTGTAGTCGCGTTGTC....................................................................................................... 21 2 1 4.00 4 0 4 0 0 0 0
..................................................................GTGCATTGTAGTCACATTGTCA...................................................................................................... 22 2 1 4.00 4 1 1 0 0 0 2
..................................................................GTGCATTGGAGTCGCATTGTCG...................................................................................................... 22 2 1 4.00 4 4 0 0 0 0 0
..................................................................GCGCATTGTAGTCGCATTGTT....................................................................................................... 21 2 1 4.00 4 0 4 0 0 0 0
..................................................................ATGCATTGTAGTCGCATTGTCT...................................................................................................... 22 1 1 4.00 4 2 1 0 0 1 0
..................................................................GTGCATTGGAGTCGCATTGTCTG..................................................................................................... 23 1 1 4.00 4 4 0 0 0 0 0
..................................................................GTGCATTGGAGACGCATTGTC....................................................................................................... 21 2 1 4.00 4 0 4 0 0 0 0
..................................................................GTGCATTGTAGTCGCATTGTCAG..................................................................................................... 23 1 1 4.00 4 4 0 0 0 0 0
..................................................................GTGCATTGTACTCGCATTGTCT...................................................................................................... 22 1 1 4.00 4 1 2 0 1 0 0
..................................................................GTGCATTCTAGTCGCATTGT........................................................................................................ 20 1 1 4.00 4 1 3 0 0 0 0
..................................................................GAGCATTGTAGTCGCATTGTCA...................................................................................................... 22 2 1 4.00 4 3 1 0 0 0 0
..................................................................ATGCATTGTAGTCGCATTG......................................................................................................... 19 1 1 4.00 4 1 1 0 0 2 0
..................................................................GGGCATTGTAGTCGCTTTGT........................................................................................................ 20 2 1 4.00 4 0 4 0 0 0 0
..................................................................GTGCATTGTAGCAGCATTGTC....................................................................................................... 21 2 1 4.00 4 0 4 0 0 0 0
..................................................................GAGCATTGTAGTAGCATTGTC....................................................................................................... 21 2 1 4.00 4 0 4 0 0 0 0
..................................................................GTGCATTGTAGCCGCATTGTCT...................................................................................................... 22 1 1 4.00 4 0 3 0 1 0 0
..................................................................GTGCAGTGTAGTCGCCTTGTC....................................................................................................... 21 2 1 4.00 4 0 4 0 0 0 0
..................................................................GGGCATTGTAGTCACCTTGTC....................................................................................................... 21 3 2 4.00 8 0 8 0 0 0 0
..................................................................GTGCATTGTAGTCCCACTGTC....................................................................................................... 21 2 1 4.00 4 0 4 0 0 0 0
..................................................................GGGCATTGTAGTCGCATTTTC....................................................................................................... 21 2 2 4.00 8 0 7 0 0 1 0
..................................................................GTGCATGGGAGTCGCATTGTC....................................................................................................... 21 2 1 4.00 4 0 4 0 0 0 0
..................................................................GCGCATTGTAGTCACATTGTC....................................................................................................... 21 2 1 4.00 4 0 4 0 0 0 0
..................................................................GTGCATTGTAGGCGCTTTGTC....................................................................................................... 21 2 1 4.00 4 0 4 0 0 0 0
..................................................................GTGCATTGTAGTCGCATTTC........................................................................................................ 20 2 1 4.00 4 3 1 0 0 0 0
..................................................................GTGCATTGTAGTCGCATTGAA....................................................................................................... 21 2 2 3.50 7 3 0 1 2 1 0
...................................................................GTCATTGTAGTCGCATTGT........................................................................................................ 19 2 2 3.50 7 5 0 0 2 0 0
..................................................................GGGCATTGTAGTAGCATTGTC....................................................................................................... 21 2 1 3.00 3 0 3 0 0 0 0
..................................................................GTGCATTGTAGGCGCATTGTCT...................................................................................................... 22 1 1 3.00 3 0 2 0 0 1 0
..................................................................GGGCATTGTAGTCGCATTGGC....................................................................................................... 21 2 2 3.00 6 0 5 0 0 1 0
..................................................................GTGCATTGTAGTCCCATTGC........................................................................................................ 20 2 1 3.00 3 0 3 0 0 0 0
..................................................................GTGCATTCTAGTCGCATTCTC....................................................................................................... 21 2 1 3.00 3 0 2 0 0 1 0
..................................................................GAGCGTTGTAGTCGCATTGTC....................................................................................................... 21 2 1 3.00 3 0 3 0 0 0 0
..................................................................GTGCATTGTAGCCGAATTGTC....................................................................................................... 21 2 1 3.00 3 0 3 0 0 0 0
..................................................................GTGCATTGAAGTCGCATTCTC....................................................................................................... 21 2 1 3.00 3 0 2 0 0 1 0
..................................................................GTGCATTGCAGTCGCATTGTT....................................................................................................... 21 2 1 3.00 3 1 2 0 0 0 0
..................................................................GTGCATTGCAGTCGCATTGTCTG..................................................................................................... 23 1 1 3.00 3 3 0 0 0 0 0
..................................................................GTGCATTGAAGTGGCATTGTC....................................................................................................... 21 2 1 3.00 3 2 1 0 0 0 0
..................................................................GTGCATTGTAGCCGCATTG......................................................................................................... 19 1 1 3.00 3 0 2 0 0 0 1
..................................................................GTGCATTGTAGTACCATTGTC....................................................................................................... 21 2 1 3.00 3 0 3 0 0 0 0
..................................................................GCGCATTGTAGTCGCACTGTC....................................................................................................... 21 2 1 3.00 3 0 2 0 0 1 0
..................................................................GTGCATTGTAGGAGCATTGTC....................................................................................................... 21 2 1 3.00 3 0 3 0 0 0 0

Anti-sense strand reads

CTCTCTCACATTGTTAGACGTAAACTAGTTTTTTGGTTTGGTTTGTGAGGGCCTCTACTGTGCGTCCACGTAACATCAGCGTAACAGACAGGTAGAACTAAAGTCCGTTATGTTGACGTCACGTTCGAGACACGTAAAGTATTTAGTTGCGGCAGGTTACAGCGACCAGGTCAAAGTCAGGGACGGGGCC

***********************************************.((((((.((((.((.(((((((((((...((((((((.............))))))))...)))))))))))..)).))))))))))....*************************************************** 		Read size # Mismatch Hit Count Total Norm Total V057

head

 V042

embryo

 M042

female body

 V111

male body
...........................................................................TCAGCGGAACAGACAGGG................................................................................................. 18 2 5 0.20 1 1 0 0 0
............................................................................................................TCTTTAGACGTCACGTTCGA.............................................................. 20 3 12 0.08 1 0 1 0 0
.................................TGGTTTTGTTTGTGTGGACCT........................................................................................................................................ 21 3 20 0.05 1 0 0 1 0
......................................TTCTTTGTGAGGGCCTCGA..................................................................................................................................... 19 3 20 0.05 1 0 0 0 1
.............................................TGGGGGCGTCTACTGGGCG.............................................................................................................................. 19 3 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droPer2 scaffold_47:413957-414146 + dpe-mir-33 Known_mirbase GAGAGAGTGTAACAATCTGCATTTGATCAAAAAACCA--------------------------AAC---CAAACA-----------CTC-CCGGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTCC-------------------AT--CTT--GA-TTTCAGGCAATACAACTGCAGTGCAAGCTCTGTGCATTTCATAAATCAACGCCGTCCAATGTC------GCTGGTCCAGTT--TCAGTCCC--------------------------------------------TGCCCC----G-G---
dp5 XR_group6:5913780-5913969 + dps-mir-33 Known_mirbase GAGAGAGTGTAACAATCTGCATTTGATCAAAAAACCA--------------------------AAC---CAAACA-----------CTC-CCGGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTCC-------------------AT--CTT--GA-TTTCAGGCAATACAACTGCAATGCAAGCTCTGTGCATTTCATAAATCAACGCCGTCCAATGTC------GCTGGTCCAGTT--TCAGTCCC--------------------------------------------TGCCCC----G-G---
droWil2 scf2_1100000004511:8572459-8572673 + dwi-mir-33 Known_mirbase AAGCCACATTAAAGATCA--------------------------CATCGAGTAGACGGAACCTAAA---CAAA------------------TTGAAGTTACACGAAGGTGCATTGTAGTCGCATTGTCTGTGCTCCAAAAAAAAAAAACCCCCA--GTT--TCTATTCAGGCAATACAACTGCAGTGCAAGCTTCGTGTGACTTATAAG-CAACGGCA---AATAGG------TT---C--------------------AAAGG--------ATATTCTCAACTAGAAACAAACTCGAATTCCTCA-----G---
droVir3 scaffold_13049:22941073-22941253 - dvi-mir-33 Known_mirbase AAGCTGGAATACTTC-AA------AATTCAAGCCCAA--------------------------AAT---CCGAC---A--------TCT-CTGGAGCTGTTACGGAGGTGCATTGTAGTCGCATTGTCTGTCT-------------------CAAATTT--GC--CCGCGGCAATACAACTGCAGTGCAAGCTCCGTGCAGTTCACACG-CAACGTCG---GAAGTT------ACCTGCA-------------------GAAAGTCAACAAGATGT--------------------------C----AAG-A---
droMoj3 scaffold_6680:17552792-17552973 - dmo-mir-33 Known_mirbase AAGCTGGAGCACTGCCCC------GTTTATGCAGCAT----------------------------T---CCGAC---A--------TCT-TTGGAGCTGTGACGGAGGTGCATTGTAGTCGCATTGTCTGTAT-------------------CC--TTTATTC-TCTGCGGCAATACAACTGCAGTGCAAGCTCCGTGCAGTTCACTCG-CAACGTCG---GACACC------TTAGAA--------------------TAAAGATAATGTATGTT------------------------ATC----AAG-A---
droGri2 scaffold_15110:18214423-18214619 - dgr-mir-33 Known_mirbase AAGCAGCTCGATGGAT-G---GCTGATAGAT----TCCTCTGCACAGTTAG-------------GG---CAGACA-----------TCTCCAGGAGCTGTCACGAAGGTGCATTGTAGTCGCATTGTCTGTCC-------------------AAAAATT--GC--ATGCGGCAATACAACTGCAGTGCAAGCTCCGTGCAGTTCACTAG-CAACAACT-CTTTGATC------GCTGATCGATCTGATCTCTCCC--------------------------------------------TTCGCT----C-C---
droAna3 scaffold_13337:19456748-19456953 - dan-mir-33 Known_mirbase AAGAGATTCTGCTGATTAGCGT--------A-------------CAGTGAGGTGGCCGAATACCAG---CAGACACTATACACCCGCCC-TCGGAGATGTCACGCAGGTGCATTGTAGTCGCATTGTCTGTCC-------------------CA--CTT--GC--TCCAGGCAATACAACTGCAGTGCAAGCTCTGTGCATTTCACAAA-CAACGCCA---ACTTTCACTGACACTGGC--------------------ATACGGTGCCGGAACTG-------------------------TG--A--A------
droBip1 scf7180000396360:652004-652213 - AAGAAAGTTTGAAGATTT---TTTGAT------------------AGTGAGGTGACCGAATACCAG---CAGACACTATTCACCCGCCT-TCGGAGATGTCACGCAGGTGCATTGTAGTCGCATTGTCTGTCC-------------------CG--CTT--GC--TCCAGGCAATACAACTGCAGTGCAAGCTCTGTGCATTTCACAAA-CAACGCCA---CCTGTC------ACTGGC--------------------ATAAGGTGCCGGAACTCTCCAAACT-----------------AATCA-----G---
droKik1 scf7180000302391:683531-683724 - AAGATC-----------ACG----------GCA-----------GAGTGAGTT----GAGTGACACCCACAGAA--CG--------CCT-CCGGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTTTCCCAAT--------------A--TAT--CC--TCCAGGCAATACAACTGCAGTGCAAGCTCTGTGCATTTCACAAG-CAACAATG---CT-------------CTTTCCTTT--TTAGTTTTTGGGAAACCGTGTATG---CC------------------------TTA----AAT-C---
droFic1 scf7180000454113:2506691-2506879 - AAGAAAGTCTGCATC-CT------GACAAAT----TCA-----------TGGTGACCGAATGCCAG---AGGACTCTT--------CCA-ACGGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTCC-------------------CA--ATT--GC--TTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACAAA-CAACGTCA---ATTGTC------GCTGGC--------------------AAAAGTCGCCAAGTTTT-----------------------------AG--------
droEle1 scf7180000491193:4070880-4071065 + AAGAAAGACTGCACC-CT------AATACACCAGCCAG-----------TGGTGACCGGATGCCAG---CAGACTCTT--------CCT-CCAGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTCC-------------------CA--CTT--GC--CTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACAAA-CATCGTCG---ACCGTC------GCTGGC--------------------AAAGGTCGCCTG--------------------------------------------
droRho1 scf7180000773422:131603-131788 - AAGACAGTCTAAACC-CC------GATCAACCAGCCAA-----------TGGTGACCGAATGCCAG---CAGACTACT--------CCT-TCAGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTCC-------------------CA--CTT--GC--TTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTTACAAG-CAACGCCG---ACTGTC------TCTGGC--------------------AAAAGTCGCCAG--------------------------------------------
droBia1 scf7180000302193:5876327-5876519 - AAGAAAGTCTGCAGC-CC------GATCAGTTAGCCAA-----------TGGTGACCGATTGCCAG---CAGACTCCT--------CAT-CCAGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTTC-------------------CA--CTT--GC--CTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACAAA-CAACGCCG---ACTGTC------TCTGGC--------------------AAAAGTCACCAAGTTTT-----------------------------AG--------
droTak1 scf7180000415773:734752-734945 + AAGAAAGTCTGCACC-CC------GATCAGGCAGCCCA-----------TGGTGACCGAATGCCAG---TTGACTCCT--------CATCCCAGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCC-------------------CA--CTC--GC--TTCAGGCAATACAACTTCAGTGCAAGCTCCGAGCATTTCACAAA-CAACGCCG---ACAGTC------GCTGGC--------------------AAAAGTCACCAAGTTTC-----------------------------AG--------
droEug1 scf7180000409466:5133780-5133976 - AAGAAAGTCTGCTCC-CC------GATTAAACAGCTAT-----------TGGTGACCGAATGCCAG---CAGGCTCTA--------TCT-CCAGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTTC-------------------CA--CTT--GC--TTCAGGCAATACAACTTCAGTGCAAACTCTGTGCATTTCACAAA-CAACGCCG---ACGGCC------TCTGGC--------------------AAAAGTCGCCAAGTCTG-------------------------CA----AAG-G---
dm3 chr3L:19791009-19791200 + dme-mir-33 Known_mirbase AAGAATGTGTGCACC-CC------GAACAATCAGTTTT-----------TGGCGACTGAGTGCCAC---CAGACTCTT--------CCT-CTGGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCC-------------------CA--ATT--GC--TTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACATA-CAACGCCG---AATGTC------TCTGGC--------------------AAAAGTCGCCAAGTTTT-----------------------------A---------
droSim2 3l:19400351-19400548 + dsi-mir-33 Known_mirbase AAGAATGTGTGCACC-CC------AAACAATCAGTCAT-----------TGGCGACTGAGTGCCAC---CAGACTCCT--------CCT-CCGGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCC-------------------CA--ATT--GC--TTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACACA-CAACGCCG---AATGTC------TCTGGC--------------------AAAAGTCGCCAAGTTTT-----------------------------AGAAGCG---
droSec2 scaffold_29:452705-452905 + dse-mir-33 Known_mirbase AAGAATGTGTGCACC-CC------GAACAATCAGTCAT-----------TGGCGACTGAGTGCCAC---CAGACTCTT--------CCT-CCGGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCC-------------------CA--ATT--GC--TTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACACA-CAACGCCG---AATGTC------TCTGGC--------------------AAAAGTCGACAAGTTTT-----------------------------AGAAGCGCAC
droYak3 3L:20771282-20771480 - dya-mir-33 Known_mirbase AAGAATGTGTGCACC-CC------GATCAATCGGTCAA-----------TTGCGACTGAGTGCCAC---CAGACTCTT--------ACT-CCAGAGATGTCACGAAGGTGCATTGTAGTCGCATTGTCTGTCC-------------------CA--ATT--GC--TTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACAAA-CAACGCCG---AGTGTC------TCTGGC--------------------AAAAGTCGACCAGTTTT-----------------------------AGAAGCA--C
droEre2 scaffold_4784:19550526-19550726 + der-mir-33 Known_mirbase AAGAATGTGTGCACC-CC------GATCAATCAGTCAA-----------TTGCGACTGAGTGCCAC---CAGACTCTC--------ACT-CCAGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCC-------------------CA--ATT--GC--TTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACAAA-CAACGCCG---AGTGTT------CCTGGC--------------------AAAAGTCGACAAGCTTT-----------------------------ATAAGCACAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
GAGAGAGTGTAACAATCTGCATTTGATCAAAAAACCA--------------------------AAC---CAAACA-----------CTC-CCGGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTCC-------------------AT--CTT--GA-TTTCAGGCAATACAACTGCAGTGCAAGCTCTGTGCATTTCATAAATCAACGCCGTCCAATGTC------GCTGGTCCAGTT--TCAGTCCC--------------------------------------------TGCCCC----G-G---SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
...........................................................................................................GTGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................21162345.006234512410261263714901116896848
...........................................................................................................GTGCATTGTAGTCGCATTGT............................................................................................................................................................................................20116285.001628582553277131151464137
...........................................................................................................GTGCATTGTAGTCGCATTGTCA..........................................................................................................................................................................................2212572.00257266201513873177103
...........................................................................................................GTGCATTGTAGTCGCATTGTCT..........................................................................................................................................................................................2212464.00246466148312109425369
...........................................................................................................GTGCATTGTAGTCGCATTG.............................................................................................................................................................................................1912199.0021993517351868197146
............................................................................................................TGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................2011951.0019511719190555
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCT..........................................................................................................................221626.0062612304308112673
...........................................................................................................GTGCATTGTAGTCGCATTGTT...........................................................................................................................................................................................211435.004354139031133128
............................................................................................................TGCATTGTAGTCGCATTGT............................................................................................................................................................................................191418.0041804140121
...........................................................................................................GTGCATTGTAGTCGCATTGTA...........................................................................................................................................................................................211340.00340641779194229
...........................................................................................................GTGCATTGTAGTCGCATTGTCAA.........................................................................................................................................................................................231286.00286122222111911
...........................................................................................................GTGCATTGTAGTCGCATTGTCC..........................................................................................................................................................................................221248.0024851556254611
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGC...........................................................................................................................211244.0024461644213712
...........................................................................................................GTGCATTGTAGTCGCATT..............................................................................................................................................................................................181228.0022811121011823
.............................................................................................................GCATTGTAGTCGCATTGTC...........................................................................................................................................................................................191205.00205921031036
...........................................................................................................GTGCATTGTAGTCGCATTGTCTG.........................................................................................................................................................................................231167.0016721002122724
............................................................................................................TGCATTGTAGTCGCATTG.............................................................................................................................................................................................181149.0014901490000
............................................................................................................TGCATTGTAGTCGCATTGTCA..........................................................................................................................................................................................211147.0014701470000
...........................................................................................................GTGCATTGTAGTCGCATTGTAA..........................................................................................................................................................................................221131.001313704103014
............................................................................................................TGCATTGTAGTCGCATTGTCT..........................................................................................................................................................................................211110.0011001100000
................................................................................................................................TGTCC-------------------AT--CTT--GA-TTTCAGG................................................................................................................................................19194.009436125230
...........................................................................................................GTGCATTGTAGTCGCATTGTCG..........................................................................................................................................................................................22175.007542713337
...........................................................................................................GTGCATTGTAGTCGCATTGTAAA.........................................................................................................................................................................................23168.00683502184
...........................................................................................................GTGCATTGTAGTCGCATTGC............................................................................................................................................................................................20157.005701110387
...........................................................................................................GTGCATTGTAGTCGCATTGA............................................................................................................................................................................................20135.00352212244
............................................................................................................................................................................AATACAACTGCAGTGCAAGCT..........................................................................................................................21135.00350330020
...........................................................................................................GTGCATTGTAGTCGCATTGTCAAA........................................................................................................................................................................................24130.00300263010
...........................................................................................................................................................................CAATACAACTGCAGTGCAAG............................................................................................................................20127.00270191034
...........................................................................................................GTGCATTGTAGTCGCATTGG............................................................................................................................................................................................20127.00277700121
............................................................................................................TGCATTGTAGTCGCATTGTCAA.........................................................................................................................................................................................22124.00240230010
.............................................................................................................GCATTGTAGTCGCATTGT............................................................................................................................................................................................18124.00241230000
..........................................................................................................GGTGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................22120.00200200000
...........................................................................................................GTGCATTGTAGTCGCATTGTG...........................................................................................................................................................................................21119.00191700101
...........................................................................................................GTGCATTGTAGTCGCATTGTCTT.........................................................................................................................................................................................23119.00190130033
............................................................................................................TGCATTGTAGTCGCATTGTA...........................................................................................................................................................................................20117.00170170000
.............................................................................................................GCATTGTAGTCGCATTGTCA..........................................................................................................................................................................................20116.00160160000
............................................................................................................TGCATTGTAGTCGCATTGTCC..........................................................................................................................................................................................21114.00140140000
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCTT.........................................................................................................................23113.0013080230
..............................................................................................................CATTGTAGTCGCATTGTC...........................................................................................................................................................................................18113.00132100010
...........................................................................................................GTGCATTGTAGTCGCATTT.............................................................................................................................................................................................19112.0012050160
...........................................................................................................................................................................CAATACAACTGCAGTGCAA.............................................................................................................................19112.0012080040
............................................................................................................TGCATTGTAGTCGCATTGTCTG.........................................................................................................................................................................................22110.00100100000
...............................................................................................................ATTGTAGTCGCATTGTCT..........................................................................................................................................................................................18110.00101000000
...........................................................................................................GTGCATTGTAGTCGCATTGCT...........................................................................................................................................................................................2119.009000450
...........................................................................................................GTGCATTGTAGTCGCATTGTCTGT........................................................................................................................................................................................2419.009010017
............................................................................................................................................................................AATACAACTGCAGTGCAAGC...........................................................................................................................2018.008080000
..........................................................................................................................................................................GCAATACAACTGCAGTGCAAGC...........................................................................................................................2218.008071000
...........................................................................................................GTGCATTGTAGTCGCATTC.............................................................................................................................................................................................1918.008080000
............................................................................................................TGCATTGTAGTCGCATTGTT...........................................................................................................................................................................................2017.007070000
..........................................................................................................................................................................GCAATACAACTGCAGTGCAAG............................................................................................................................2117.007060010
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGA...........................................................................................................................2117.007321010
...........................................................................................................GTGCATTGTAGTCGCATTGTCGT.........................................................................................................................................................................................2317.007020014
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCC..........................................................................................................................2216.006120021
...........................................................................................................GTGCATTGTAGTCGCATTGCA...........................................................................................................................................................................................2114.004000130
...........................................................................................................GTGCATTGTAGTCGCATTGTAG..........................................................................................................................................................................................2214.004010021
.............................................................................................................GCATTGTAGTCGCATTGTCT..........................................................................................................................................................................................2014.004040000
.................................................................................................................................GTCC-------------------AT--CTT--GA-TTTCAGG................................................................................................................................................1814.004040000
...........................................................................................................GTGCATTGTAGTCGCATTTC............................................................................................................................................................................................2014.004030010
...........................................................................................................GTGCATTGTAGTCGCATTGAA...........................................................................................................................................................................................2123.507130102
dp5
GAGAGAGTGTAACAATCTGCATTTGATCAAAAAACCA--------------------------AAC---CAAACA-----------CTC-CCGGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTCC-------------------AT--CTT--GA-TTTCAGGCAATACAACTGCAATGCAAGCTCTGTGCATTTCATAAATCAACGCCGTCCAATGTC------GCTGGTCCAGTT--TCAGTCCC--------------------------------------------TGCCCC----G-G---SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
...........................................................................................................GTGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................211188132.0018813299041534021169894369879393934978766399
...........................................................................................................GTGCATTGTAGTCGCATTGT............................................................................................................................................................................................20125204.002520412820057332771482073189034018474
...........................................................................................................GTGCATTGTAGTCGCATTG.............................................................................................................................................................................................19113688.00136887713222314391977326334
............................................................................................................TGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................20111872.001187231186204021000
...........................................................................................................GTGCATTGTAGTCGCATTGTCA..........................................................................................................................................................................................2219222.009222688497204926211274127121
...........................................................................................................GTGCATTGTAGTCGCATTGTCT..........................................................................................................................................................................................2217398.0073982576163354672615518841588
...........................................................................................................................................................................CAATACAACTGCAATGCAAGCT..........................................................................................................................2215747.005747338401483754223310805183
...........................................................................................................GTGCATTGTAGTCGCATTGTCC..........................................................................................................................................................................................2211957.0019572113621244737918870
...........................................................................................................GTGCATTGTAGTCGCATTGTA...........................................................................................................................................................................................2111641.00164192137211622935191830
............................................................................................................TGCATTGTAGTCGCATTGT............................................................................................................................................................................................1911500.0015000150000000000
...........................................................................................................GTGCATTGTAGTCGCATTGTT...........................................................................................................................................................................................2111474.001474531193222182986152
............................................................................................................TGCATTGTAGTCGCATTG.............................................................................................................................................................................................1811127.0011270112700000000
...........................................................................................................................................................................CAATACAACTGCAATGCAAGC...........................................................................................................................2111078.0010781813441855980112
............................................................................................................TGCATTGTAGTCGCATTGTCA..........................................................................................................................................................................................211622.00622062101000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCAA.........................................................................................................................................................................................231608.00608053261291452001
.............................................................................................................GCATTGTAGTCGCATTGTC...........................................................................................................................................................................................191547.00547753610021000
............................................................................................................TGCATTGTAGTCGCATTGTCT..........................................................................................................................................................................................211467.00467046600001000
................................................................................................................................TGTCC-------------------AT--CTT--GA-TTTCAGG................................................................................................................................................191404.004040310736641625
...........................................................................................................GTGCATTGTAGTCGCATTGTCTG.........................................................................................................................................................................................231383.003832353011147140
...........................................................................................................GTGCATTGTAGTCGCATT..............................................................................................................................................................................................181347.00347212710120390310
............................................................................................................................................................................AATACAACTGCAATGCAAGCT..........................................................................................................................211347.003470320180216000
...........................................................................................................GTGCATTGTAGTCGCATTGTAA..........................................................................................................................................................................................221257.00257319410820112000
...........................................................................................................GTGCATTGTAGTCGCATTT.............................................................................................................................................................................................191215.00215020701060010
...........................................................................................................................................................................CAATACAACTGCAATGCAAGCC..........................................................................................................................221157.0015701638101002000
...........................................................................................................GTGCATTGTAGTCGCATTGTCTT.........................................................................................................................................................................................231155.00155014710014020
...........................................................................................................GTGCATTGTAGTCGCATTGTCG..........................................................................................................................................................................................221150.001502123105143200
...........................................................................................................................................................................CAATACAACTGCAATGCAAG............................................................................................................................201133.001330107254510000
..........................................................................................................GGTGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................221123.00123411015120000
............................................................................................................TGCATTGTAGTCGCATTGTCC..........................................................................................................................................................................................211115.00115011500000000
...........................................................................................................GTGCATTGTAGTCGCATTGA............................................................................................................................................................................................201105.0010519701320001
............................................................................................................TGCATTGTAGTCGCATTGTA...........................................................................................................................................................................................20193.009309300000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCAAA........................................................................................................................................................................................24186.008607820000600
...........................................................................................................GTGCATTGTAGTCGCATTGC............................................................................................................................................................................................20186.0086495530114000
.............................................................................................................GCATTGTAGTCGCATTGT............................................................................................................................................................................................18182.008208200000000
............................................................................................................................................................................AATACAACTGCAATGCAAGC...........................................................................................................................20173.007306526000000
..............................................................................................................CATTGTAGTCGCATTGTC...........................................................................................................................................................................................18173.007365906002000
...........................................................................................................GTGCATTGTAGTCGCATTGTCCC.........................................................................................................................................................................................23162.00620160280310140
...........................................................................................................GTGCATTGTAGTCGCATTGTAAA.........................................................................................................................................................................................23251.50103081011321500
...........................................................................................................................................................................CAATACAACTGCAATGCAAGCTT.........................................................................................................................23147.004703013157000
............................................................................................................TGCATTGTAGTCGCATTGTCAA.........................................................................................................................................................................................22146.004604600000000
............................................................................................................TGCATTGTAGTCGCATTGTT...........................................................................................................................................................................................20244.008808800000000
...........................................................................................................GTGCATTGTAGTCGCATTGTG...........................................................................................................................................................................................21135.003502215070000
............................................................................................................TGCATTGTAGTCGCATTGTCTG.........................................................................................................................................................................................22132.003203200000000
...........................................................................................................GTGCATTGTAGTCGCATTGG............................................................................................................................................................................................20130.003022601010000
.............................................................................................................GCATTGTAGTCGCATTGTCA..........................................................................................................................................................................................20127.002702700000000
.............................................................................................................................................................................ATACAACTGCAATGCAAGCT..........................................................................................................................20127.002702501010000
.................................................................................................................................GTCC-------------------AT--CTT--GA-TTTCAGG................................................................................................................................................18126.002602500100000
.............................................................................................................GCATTGTAGTCGCATTGTCT..........................................................................................................................................................................................20125.002502500000000
..........................................................................................................GGTGCATTGTAGTCGCATTGT............................................................................................................................................................................................21121.002102000010000
...........................................................................................................................................................................CAATACAACTGCAATGCAAGCA..........................................................................................................................22120.002001521101000
............................................................................................................TGCATTGTAGTCGCATTT.............................................................................................................................................................................................18119.001901900000000
..........................................................................................................................................................................GCAATACAACTGCAATGCAAGC...........................................................................................................................22118.001801620000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCCT.........................................................................................................................................................................................23117.001701005010010
...........................................................................................................................................................................CAATACAACTGCAATGCAA.............................................................................................................................19116.00160900061000
...........................................................................................................GTGCATTGTAGTCGCATTGTCGAG........................................................................................................................................................................................24115.001500000001500
...........................................................................................................GTGCATTGTAGTCGCATTGTCTGT........................................................................................................................................................................................24115.001501200101010
...........................................................................................................GTGCATTGTAGTCGCATTGTCTA.........................................................................................................................................................................................23113.001301000000300
............................................................................................................TGCATTGTAGTCGCATTGTCG..........................................................................................................................................................................................21112.001201200000000
...........................................................................................................GTGCATTGTAGTCGCATTGTTA..........................................................................................................................................................................................22111.001101100000000
............................................................................................................TGCATTGTAGTCGCATTGA............................................................................................................................................................................................19111.001101100000000
.............................................................................................................GCATTGTAGTCGCATTGTA...........................................................................................................................................................................................19111.001101100000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCCA.........................................................................................................................................................................................23110.00100700300000
............................................................................................................TGCATTGTAGTCGCATTGTCTT.........................................................................................................................................................................................2219.0090900000000
...........................................................................................................................................................................CAATACAACTGCAATGCAAGCTA.........................................................................................................................2318.0080610001000
...........................................................................................................................................................................CAATACAACTGCAATGCAAGT...........................................................................................................................2118.0080401030000
.............................................................................................................................................................................ATACAACTGCAATGCAAGC...........................................................................................................................1917.0070601000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCTTG........................................................................................................................................................................................2417.0070700000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCAT.........................................................................................................................................................................................2317.0071600000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCTC.........................................................................................................................................................................................2317.0070401010010
............................................................................................................................................................................AATACAACTGCAATGCAAG............................................................................................................................1917.0070700000000
.........................................................................................................................................................................GGCAATACAACTGCAATGCAAG............................................................................................................................2217.0070700000000
..........................................................................................................GGTGCATTGTAGTCGCATTG.............................................................................................................................................................................................2017.0070700000000
............................................................................................................TGCATTGTAGTCGCATTGTAA..........................................................................................................................................................................................2117.0070700000000
.............................................................................................................GCATTGTAGTCGCATTGTCC..........................................................................................................................................................................................2016.0060600000000
......................................................................................CTC-CCGGAGATGACACGCAG................................................................................................................................................................................................................2016.0060101013000
...............................................................................................................ATTGTAGTCGCATTGTCT..........................................................................................................................................................................................1816.0060600000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCAC.........................................................................................................................................................................................2316.0060600000000
...........................................................................................................GTGCATTGTAGTCGCATTC.............................................................................................................................................................................................1916.0060302010000
...........................................................................................................GTGCATTGTAGTCGCATTGTCCCC........................................................................................................................................................................................2416.0060104000010
...........................................................................................................GTGCATTGTAGTCGCATTTC............................................................................................................................................................................................2016.0060600000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCTGTCC-------------------...................................................................................................................................................................2615.0050320000000
...............................................................................................................ATTGTAGTCGCATTGTCA..........................................................................................................................................................................................1815.0051400000000
............................................................................................................................................................................AATACAACTGCAATGCAAGCC..........................................................................................................................2115.0050113000000
...............................................................................................................................................................................ACAACTGCAATGCAAGCT..........................................................................................................................1815.0050302000000
..............................................................................................................CATTGTAGTCGCATTGTCT..........................................................................................................................................................................................1915.0052300000000
...........................................................................................................GTGCATTGTAGTCGCATTGAA...........................................................................................................................................................................................2124.5090800010000
droWil2
AAGCCACATTAAAGATCA--------------------------CATCGAGTAGACGGAACCTAAA---CAAA------------------TTGAAGTTACACGAAGGTGCATTGTAGTCGCATTGTCTGTGCTCCAAAAAAAAAAAACCCCCA--GTT--TCTATTCAGGCAATACAACTGCAGTGCAAGCTTCGTGTGACTTATAAG-CAACGGCA---AATAGG------TT---C--------------------AAAGG--------ATATTCTCAACTAGAAACAAACTCGAATTCCTCA-----G---SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
...........................................................................................................GTGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................211232621.002326211980932223664534558192
...........................................................................................................GTGCATTGTAGTCGCATTGT............................................................................................................................................................................................20111148.0011148213244136686603275
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCT..........................................................................................................................2215700.0057001602204305432763
...........................................................................................................GTGCATTGTAGTCGCATTG.............................................................................................................................................................................................1915022.0050221616285034115407
...........................................................................................................GTGCATTGTAGTCGCATTGTCT..........................................................................................................................................................................................2213997.003997233690432121604
............................................................................................................TGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................2011880.0018801591714025
...........................................................................................................GTGCATTGTAGTCGCATTGTCC..........................................................................................................................................................................................2211375.001375607541313211
...........................................................................................................GTGCATTGTAGTCGCATTGTCA..........................................................................................................................................................................................2211231.001231259524535489
...........................................................................................................GTGCATTGTAGTCGCATTGTA...........................................................................................................................................................................................211910.0091069311504260
...........................................................................................................GTGCATTGTAGTCGCATTGTT...........................................................................................................................................................................................211825.00825489207205104
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGC...........................................................................................................................211687.00687124417426116
............................................................................................................TGCATTGTAGTCGCATTGT............................................................................................................................................................................................191355.003551353001
...........................................................................................................GTGCATTGTAGTCGCATT..............................................................................................................................................................................................181285.0028513211101131
............................................................................................................TGCATTGTAGTCGCATTG.............................................................................................................................................................................................181247.002475240011
...........................................................................................................GTGCATTGTAGTCGCATTGTCTG.........................................................................................................................................................................................231225.002254711531941
...........................................................................................................GTGCATTGTAGTCGCATTGTCAA.........................................................................................................................................................................................231222.0022205301663
.............................................................................................................GCATTGTAGTCGCATTGTC...........................................................................................................................................................................................191219.0021990112467
............................................................................................................................................................................AATACAACTGCAGTGCAAGCT..........................................................................................................................211211.0021121780724
...........................................................................................................GTGCATTGTAGTCGCATTGG............................................................................................................................................................................................201138.001381332003
...........................................................................................................GTGCATTGTAGTCGCATTGC............................................................................................................................................................................................201114.001149923010
..............................................................................................................CATTGTAGTCGCATTGTC...........................................................................................................................................................................................181106.001068224000
...........................................................................................................GTGCATTGTAGTCGCATTGTAA..........................................................................................................................................................................................221100.001005150764
............................................................................................................TGCATTGTAGTCGCATTGTCT..........................................................................................................................................................................................21177.0077671000
...........................................................................................................GTGCATTGTAGTCGCATTGTCG..........................................................................................................................................................................................22175.00754386513
...........................................................................................................................................................................CAATACAACTGCAGTGCAAG............................................................................................................................20168.0068446099
...........................................................................................................GTGCATTGTAGTCGCATTGTCCC.........................................................................................................................................................................................23163.006313380012
.........................................................................................................AGGTGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................23150.00502960510
............................................................................................................TGCATTGTAGTCGCATTGTCA..........................................................................................................................................................................................21142.0042041010
............................................................................................................TGCATTGTAGTCGCATTGTCC..........................................................................................................................................................................................21138.0038236000
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCTC.........................................................................................................................23137.0037219007
..........................................................................................................................................................................GCAATACAACTGCAGTGCAAGC...........................................................................................................................22136.0036033003
...........................................................................................................GTGCATTGTAGTCGCATTGA............................................................................................................................................................................................20134.0034519055
............................................................................................................................................................................AATACAACTGCAGTGCAAGC...........................................................................................................................20133.0033032001
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCTT.........................................................................................................................23131.00314120114
.............................................................................................................GCATTGTAGTCGCATTGT............................................................................................................................................................................................18131.0031029002
..........................................................................................................GGTGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................22127.00271213002
...........................................................................................................GTGCATTGTAGTCGCATTGTG...........................................................................................................................................................................................21126.0026195002
...........................................................................................................GTGCATTGTAGTCGCATTGTAAA.........................................................................................................................................................................................23226.0052090430
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCC..........................................................................................................................22126.0026168002
...........................................................................................................GTGCATTGTAGTCGCATTGTCTT.........................................................................................................................................................................................23125.0025419011
.........................................................................................................AGGTGCATTGTAGTCGCATTGT............................................................................................................................................................................................22123.0023210515
.............................................................................................................................................................................ATACAACTGCAGTGCAAGCT..........................................................................................................................20122.0022217030
..........................................................................................................................................................................GCAATACAACTGCAGTGCAAG............................................................................................................................21119.0019017011
...........................................................................................................GTGCATTGTAGTCGCATTT.............................................................................................................................................................................................19119.0019116011
...........................................................................................................GTGCATTGTAGTCGCATTGTCTC.........................................................................................................................................................................................23118.0018143001
...........................................................................................................GTGCATTGTAGTCGCATTGTTC..........................................................................................................................................................................................22117.001798000
..............................................................................................................CATTGTAGTCGCATTGTCT..........................................................................................................................................................................................19116.0016141001
............................................................................................................TGCATTGTAGTCGCATTGTT...........................................................................................................................................................................................20116.0016016000
............................................................................................................TGCATTGTAGTCGCATTGTCTG.........................................................................................................................................................................................22114.0014014000
...........................................................................................................GTGCATTGTAGTCGCATTGTCCT.........................................................................................................................................................................................23114.001484002
...............................................................................................................ATTGTAGTCGCATTGTCT..........................................................................................................................................................................................18113.0013130000
...........................................................................................................GTGCATTGTAGTCGCATTC.............................................................................................................................................................................................19112.0012010002
...........................................................................................................................................................................CAATACAACTGCAGTGCAA.............................................................................................................................19111.001108021
............................................................................................................TGCATTGTAGTCGCATTGTCAA.........................................................................................................................................................................................2219.00909000
...........................................................................................................GTGCATTGTAGTCGCATTGTCAAA........................................................................................................................................................................................2417.00703040
.............................................................................................................GCATTGTAGTCGCATTGTCT..........................................................................................................................................................................................2017.00734000
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCG..........................................................................................................................2217.00751001
..............................................................................................................................................................................TACAACTGCAGTGCAAGCT..........................................................................................................................1916.00605001
...........................................................................................................................................................................CAATACAACTGCAGTGCA..............................................................................................................................1816.00614010
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGT...........................................................................................................................2115.00502021
...........................................................................................................GTGCATTGTAGTCGCATTGTCCA.........................................................................................................................................................................................2315.00504001
...............................................................................................................................................................................ACAACTGCAGTGCAAGCT..........................................................................................................................1815.00504001
............................................................................................................................................................................AATACAACTGCAGTGCAAG............................................................................................................................1915.00504001
.............................................................................................................................................................................ATACAACTGCAGTGCAAGC...........................................................................................................................1915.00505000
...........................................................................................................GTGCATTGTAGTCGCATTGTCTGT........................................................................................................................................................................................2415.00503011
...............................................................................................................ATTGTAGTCGCATTGTCC..........................................................................................................................................................................................1815.00550000
......................................................................AAA------------------TTGAAGTTACACGAAG................................................................................................................................................................................................................1924.50900081
.........................................................................................................AGGTGCATTGTAGTCGCATTG.............................................................................................................................................................................................2114.00420002
.............................................................................................................GCATTGTAGTCGCATTGTT...........................................................................................................................................................................................1914.00431000
............................................................................................................TGCATTGTAGTCGCATTGTCCC.........................................................................................................................................................................................2214.00404000
..........................................................................................................GGTGCATTGTAGTCGCATTGT............................................................................................................................................................................................2114.00403001
............................................................................................................TGCATTGTAGTCGCATTGTA...........................................................................................................................................................................................2014.00404000
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCA..........................................................................................................................2214.00403001
............................................................................................................TGCATTGTAGTCGCATTGTCTT.........................................................................................................................................................................................2214.00404000
...........................................................................................................GTGCATTGTAGTCGCATG..............................................................................................................................................................................................1814.00440000
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCTTT........................................................................................................................2414.00404000
..............................................................................................................CATTGTAGTCGCATTGTCC..........................................................................................................................................................................................1913.00330000
...........................................................................................................GTGCATTGTAGTCGCATTGTTAA.........................................................................................................................................................................................2313.00300030
..........................................................................................................................................................................GCAATACAACTGCAGTGCAAGCT..........................................................................................................................2313.00303000
...........................................................................................................GTGCATTGTAGTCGCATTGTTCC.........................................................................................................................................................................................2313.00312000
.............................................................................................................GCATTGTAGTCGCATTGTCC..........................................................................................................................................................................................2013.00321000
...........................................................................................................GTGCATTGTAGTCGCATTGTCGA.........................................................................................................................................................................................2313.00330000
...........................................................................................................GTGCATTGTAGTCGCATTGAAA..........................................................................................................................................................................................2223.00602040
droVir3
AAGCTGGAATACTTC-AA------AATTCAAGCCCAA--------------------------AAT---CCGAC---A--------TCT-CTGGAGCTGTTACGGAGGTGCATTGTAGTCGCATTGTCTGTCT-------------------CAAATTT--GC--CCGCGGCAATACAACTGCAGTGCAAGCTCCGTGCAGTTCACACG-CAACGTCG---GAAGTT------ACCTGCA-------------------GAAAGTCAACAAGATGT--------------------------C----AAG-A---SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
...........................................................................................................GTGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................211511067.00511067215275909231113147731164351296833250344716771433330435711292375232012199321943884749861340834661792970656849864338441194751237885678153224153587562041835823262723173218444041413841434612303582587016233015637317892222252324546446970318793758149482493782705064168178
...........................................................................................................GTGCATTGTAGTCGCATTGT............................................................................................................................................................................................20149539.00495392055105526389891941121680174138725830330502293709585291108658811492098109812322209175813492691115132094901809816907527383179424021101141011000011673356029001261023277107115683893462812614623404317194267
...........................................................................................................GTGCATTGTAGTCGCATTGTCC..........................................................................................................................................................................................22120748.002074861787943366737205250012300029264584216305309256597733104788515711216371565764220541453538293061022030011011007620110319170186928786303053514495977374192835202923
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCT..........................................................................................................................22119963.0019963541238414376759176217000155142835052233217310242473899217190330203878985445105310212111599872650000000000010231015182427120513571012101816246917013001
...........................................................................................................GTGCATTGTAGTCGCATTGTCA..........................................................................................................................................................................................22119656.0019656126295173026461033484747632444953277038331462108673364036985801061404916744724779811708506862013140322223111110227282270502558160154911662174411841312142915298417155576
...........................................................................................................GTGCATTGTAGTCGCATTGTCT..........................................................................................................................................................................................22119333.0019333393750110255401103119253011134147175762021409693220241851321252661983647682377765190741071045676151715151181527109119412941291232912253710197155263273182168316991465111319791558132453893132
...........................................................................................................GTGCATTGTAGTCGCATTG.............................................................................................................................................................................................1918786.008786982942749229874048322424021829661111666610810412895116992071203965812076467811416210511685651230011002010100002115373424202160653511793637710799191271430
...........................................................................................................GTGCATTGTAGTCGCATTGTCAA.........................................................................................................................................................................................2316476.00647620135101901700005353321050215878287223580247911413481157770210065171150111201020100100000018320507325666719384834373043221582924
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGC...........................................................................................................................2114306.004306731921628174821000010123101677963361310711516414157331141618214715259136314290110000100000013382296510196926699117567212210571497
...........................................................................................................GTGCATTGTAGTCGCATTGTA...........................................................................................................................................................................................2113401.0034011145052131831211007233310466525813111920312014114132013636222472686899646210430630215330113215373032288357273249297298275132438
............................................................................................................TGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................2012666.002666721251703440001000210002750831392123218010055000000000000000100002210300042345200000
...........................................................................................................GTGCATTGTAGTCGCATTGTT...........................................................................................................................................................................................2111523.00152361176189452554480000161991822133229392781226252344235614296422441000000000000000020111274104711155585426424920000
...........................................................................................................GTGCATTGTAGTCGCATTGTAA..........................................................................................................................................................................................2211431.0014313727074602111619330220352063411105946114821153136236922400000000000000000001522701204781161213868580144
...........................................................................................................GTGCATTGTAGTCGCATT..............................................................................................................................................................................................1811080.0010808231630416247113310101722721171126181897106871530215270222235570000010000000004000013290318000121396171000000
............................................................................................................................................................................AATACAACTGCAGTGCAAGCT..........................................................................................................................211889.0088900772010000000002413403420131068370100000100000000000000000000260312200000000100000
...........................................................................................................GTGCATTGTAGTCGCATTGTAAA.........................................................................................................................................................................................231814.0081402201201010004200001010010249541500014013646106341600000000000000000000350010863357117021202121082127
...........................................................................................................................................................................CAATACAACTGCAGTGCAAG............................................................................................................................201647.006474523930010000111231291215492210313918111723274042485712000000000000000000011110011443135463232423
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCTC.........................................................................................................................231522.00522272016212400000000302947496102323232341412361300001700000000000000000000480147000234108400000
............................................................................................................TGCATTGTAGTCGCATTGT............................................................................................................................................................................................191485.00485004670000001000000000000001020151201010001000000000000000000000000100000000100000
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCTT.........................................................................................................................231484.004848351920010000000018166953161714321151221101200006600000000000000000100134009500074322600000
...........................................................................................................GTGCATTGTAGTCGCATTGTCAAA........................................................................................................................................................................................241481.00481003061000000051000000100215739400001609225015700000000010000000001200041305046155411711079137
...........................................................................................................GTGCATTGTAGTCGCATTGTCG..........................................................................................................................................................................................221420.004201642261111802002221201121261455151368314410185164138000010000000000000052512035125278955934136
............................................................................................................TGCATTGTAGTCGCATTGTCC..........................................................................................................................................................................................211404.00404103920000000000004000000101000010001000011000000000000000000000000000000000000001
............................................................................................................TGCATTGTAGTCGCATTG.............................................................................................................................................................................................181256.00256022510000000000000000010100000010000000000000000000000000000000000000000000000000
.............................................................................................................GCATTGTAGTCGCATTGTC...........................................................................................................................................................................................191207.002071311974022000000012031213061333170102100003000000000000000510002100000023384500000
...........................................................................................................GTGCATTGTAGTCGCATTGTCCC.........................................................................................................................................................................................231184.00184811340010000000046014224500010412618010000020000000000000000000003000000947179900000
...........................................................................................................................................................................CAATACAACTGCAGTGCAA.............................................................................................................................191184.00184014010000000000992973010321251101271541312111000000000000000000008000003000302300101
..............................................................................................................CATTGTAGTCGCATTGTC...........................................................................................................................................................................................181176.001765253024011000000013010220194222254203000046000000000000000010000103200089394310000
............................................................................................................................................................................AATACAACTGCAGTGCAAGC...........................................................................................................................201167.00167001360000000000010023100202100323100000001000000000000000000001101600000000000000
...........................................................................................................GTGCATTGTAGTCGCATTGA............................................................................................................................................................................................201158.00158243401201000000210111011530606108113233130000000000000000000012500197302002031258
............................................................................................................TGCATTGTAGTCGCATTGTCA..........................................................................................................................................................................................211158.00158001520010200000000000000010000000001100000000000000000000000000000000000000000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCCT.........................................................................................................................................................................................231157.00157392100100000001331013036002001512413020000011010002110000000012002100016020766120001
...........................................................................................................GTGCATTGTAGTCGCATTGC............................................................................................................................................................................................201137.00137635181320000000020020500812001013151011260000000000000000000130400300000000010000
...........................................................................................................GTGCATTGTAGTCGCATTGTCTT.........................................................................................................................................................................................231118.0011833210001000000032064321510066395620012301010000000000000000004203020022011100000
...........................................................................................................GTGCATTGTAGTCGCATTGTTC..........................................................................................................................................................................................221116.001166171900100000000530100213000116103900100005000000000000100100004000110000205600001
...........................................................................................................GTGCATTGTAGTCGCATTGTG...........................................................................................................................................................................................211105.001052149101120120000171100101200003100210012000000000000000000000017000013042314300001
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCC..........................................................................................................................22197.0097217263000000000022040203500121342301000001000000000000000000000302100000221200000
..........................................................................................................GGTGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................22196.009644240000000000000000001100000000100000000010001001001000010000000000081212221100000
...........................................................................................................GTGCATTGTAGTCGCATTGTCCA.........................................................................................................................................................................................23195.00950090100000001000010010100231150320112121050000000000000000000020003445022000010010
...........................................................................................................GTGCATTGTAGTCGCATTGG............................................................................................................................................................................................20191.0091184750111100100000000000000000010101000000000000000000000000005200101110101000000
......................................................................................TCT-CTGGAGCTGTTACGGAG................................................................................................................................................................................................................20188.00880020212292200001010021421533554801000023000000000000000000003100100002200600000
............................................................................................................TGCATTGTAGTCGCATTGTCT..........................................................................................................................................................................................21186.008600640000000000000000000000000110100000000000000000000000000000000000035081200000
.............................................................................................................................................................................ATACAACTGCAGTGCAAGCT..........................................................................................................................20175.007501670000000000000000000000020000100000000000000000000000000011000200000000000000
...........................................................................................................................................................................CAATACAACTGCAGTGCT..............................................................................................................................18167.006706600000000000000000000010000000000000000000000000000000000000000000000000000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCTA.........................................................................................................................................................................................23164.00640080000000000000000001100241000030276100000001000000000000000000054053200322010
...........................................................................................................................................................................CAATACAACTGCAGTGCA..............................................................................................................................18159.005931530110000000000010032620000342204000001000000000000000000001000000000004010000
................................................................................................................................TGTCT-------------------CAAATTT--GC--CCGCGG................................................................................................................................................20152.005200110323000100000000020051141232000011011000000000000000000002101001011000000000
.............................................................................................................GCATTGTAGTCGCATTGT............................................................................................................................................................................................18147.004700250002000010000000100112010231202002001000000000000000000000000000000000000000
...........................................................................................................GTGCATTGTAGTCGCATTGTTA..........................................................................................................................................................................................22145.00450031000000000000000010003420140000252310000000000000000000012101100011201200000
...........................................................................................................GTGCATTGTAGTCGCAT...............................................................................................................................................................................................17143.004300000000000000000000000000000000000000000110011010200201324600000000000000000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCAT.........................................................................................................................................................................................23140.00400040000000000010000120201200000040434110000000000000000000001003300120000000000
.............................................................................................................GCATTGTAGTCGCATTGTCC..........................................................................................................................................................................................20139.003901280000000000010011001100000140000000000000000000000000000000000000000000000000
...............................................................................................................................................................................ACAACTGCAGTGCAAGCT..........................................................................................................................18134.003400280000000000000000002000000100000000000000000000000000000000001200000000000000
...........................................................................................................GTGCATTGTAGTCGCATTGAA...........................................................................................................................................................................................21133.00330440000000000000010000000001000020005010000000000000000000002000322010000000140
...........................................................................................................GTGCATTGTAGTCGCATTT.............................................................................................................................................................................................19130.003001100000000000000001011020010020403000010000000000000000000002100000000000000000
...............................................................................................................ATTGTAGTCGCATTGTCA..........................................................................................................................................................................................18128.00280000025000000000000000021020120111212000000000000000000000000001000021010000000
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGT...........................................................................................................................21126.00260020000000000002101000310001001310000002000000000001000000002300000000000001100
............................................................................................................................................................................AATACAACTGCAGTGCAAGCTT.........................................................................................................................22126.002600210000000000000000000200000000000000001000000000000000000000100100000000000000
...........................................................................................................GTGCATTGTAGTCGCATTGAAA..........................................................................................................................................................................................22224.004800300000000000000000000020220000000091000000000000000000000000021117100000011014
..............................................................................................................................................................................TACAACTGCAGTGCAAGCT..........................................................................................................................19123.002300210000000000000000000000100000000000000000000000000000000000001000000000000000
.............................................................................................................................................................................ATACAACTGCAGTGCAAGC...........................................................................................................................19123.002300200000000000000000000000000100100000000000000000000000010000000000000000000000
...........................................................................................................GTGCATTGTAGTCGCATTGTAG..........................................................................................................................................................................................22122.00222000000000000000000000001100000010112100000000000000000000002000024110000010001
...........................................................................................................GTGCATTGTAGTCGCATTGTCTAA........................................................................................................................................................................................24122.00220100000000001000000000011020112010103110000000000000000000000002101000000000001
...........................................................................................................................................................................CAATACAACTGCAGTGCAT.............................................................................................................................19122.00220520000000000010000000200010000100000000000000000000000000007000000000002100000
............................................................................................................................................................................AATACAACTGCAGTGCAAG............................................................................................................................19121.002100170000000000000000002000000100000000001000000000000000000000000000000000000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCTAAA.......................................................................................................................................................................................25120.00200000000000000000000000001000001020102100000010000000000000000001022000310000101
...........................................................................................................GTGCATTGTAGTCGCATTGTCCCC........................................................................................................................................................................................24120.00200220000000000001000000100100100300000000000000000000000000000020000030020200000
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCTA.........................................................................................................................23120.00200030000000000000010001000010313600100000000000000000000000000000000000000000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCTC.........................................................................................................................................................................................23119.00193030000000000000000001100000120300000001000000000000000000000100000000102000000
...........................................................................................................GTGCATTGTAGTCGCATTA.............................................................................................................................................................................................19119.00190010000000000000000010010010211401022001000000000000000000000000000000001000000
.............................................................................................................GCATTGTAGTCGCATTGTCT..........................................................................................................................................................................................20118.001800111000000000000000000000000000100010000000000000000000010000000000000101100000
...............................................................................................................ATTGTAGTCGCATTGTCT..........................................................................................................................................................................................18118.00185420001001000000010000100000000101000000000000000000000000000000000001000000000
............................................................................................................................................................................AATACAACTGCAGTGCAAGCTC.........................................................................................................................22118.001800120000000000000000000100000010001000000000000000000000000001001000000100000000
............................................................................................................TGCATTGTAGTCGCATTGTA...........................................................................................................................................................................................20118.001800180000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................CATTGTAGTCGCATTGTCC..........................................................................................................................................................................................19117.00170170000000000000001010100010030100000000000000000000000000000000000000100000000
...........................................................................................................GTGCATTGTAGTCGCATTGTTAA.........................................................................................................................................................................................23117.00170001000000000000000000001011000020011110100000000000000000000001001101000000002
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCG..........................................................................................................................22116.00161400000000000010000000000100101100000000000000000000000000000200200001010000000
...............................................................................................................ATTGTAGTCGCATTGTCC..........................................................................................................................................................................................18116.00161110210000000001000010301100000101000001000000000000000000000000000000000000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCTG.........................................................................................................................................................................................23116.00161080000000000000000000000000000000000100000000000000000000001000000100001030000
..............................................................................................................CATTGTAGTCGCATTGTCT..........................................................................................................................................................................................19115.00152310000000000000010000010000000000000000000000000000000000001000000000111300000
...........................................................................................................GTGCATTGTAGTCGCATTGTCTGTCT-------------------...................................................................................................................................................................26113.00131020000000000000000000000000000000000000000000000000000000000100000004112100000
...........................................................................................................GTGCATTGTAGTCGCATTGTCAC.........................................................................................................................................................................................23113.00130101100000001000000000020000000000000050000000000000000000000000100000000100000
..........................................................................................................................................................................GCAATACAACTGCAGTGCAAGCT..........................................................................................................................23113.001300130000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGA...........................................................................................................................21112.00120030000000000100000000000001100000000000000000000000000000002000000000000001201
droMoj3
AAGCTGGAGCACTGCCCC------GTTTATGCAGCAT----------------------------T---CCGAC---A--------TCT-TTGGAGCTGTGACGGAGGTGCATTGTAGTCGCATTGTCTGTAT-------------------CC--TTTATTC-TCTGCGGCAATACAACTGCAGTGCAAGCTCCGTGCAGTTCACTCG-CAACGTCG---GACACC------TTAGAA--------------------TAAAGATAATGTATGTT------------------------ATC----AAG-A---SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
...........................................................................................................GTGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................211168612.00168612129700443104541400848429165
...........................................................................................................GTGCATTGTAGTCGCATTGT............................................................................................................................................................................................20151029.0051029297735859378002847175
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCT..........................................................................................................................22136330.00363303081259106414675122416
............................................................................................................TGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................2019871.009871986012341
...........................................................................................................GTGCATTGTAGTCGCATTG.............................................................................................................................................................................................1918490.0084907453203534269229
...........................................................................................................GTGCATTGTAGTCGCATTGTCT..........................................................................................................................................................................................2215352.005352387522395562152346
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGC...........................................................................................................................2114036.00403635731510213415359
...........................................................................................................GTGCATTGTAGTCGCATTGTCC..........................................................................................................................................................................................2213484.0034842942615216660158
...........................................................................................................GTGCATTGTAGTCGCATTGTCA..........................................................................................................................................................................................2213342.003342286014377987490
............................................................................................................................................................................AATACAACTGCAGTGCAAGCT..........................................................................................................................2112764.0027642725098121
............................................................................................................TGCATTGTAGTCGCATTGT............................................................................................................................................................................................1912295.002295229500000
...........................................................................................................GTGCATTGTAGTCGCATTGTT...........................................................................................................................................................................................2111878.0018781165219728912213
.............................................................................................................GCATTGTAGTCGCATTGTC...........................................................................................................................................................................................191643.00643620025115
...........................................................................................................GTGCATTGTAGTCGCATTGTA...........................................................................................................................................................................................211638.006384842226275326
............................................................................................................TGCATTGTAGTCGCATTG.............................................................................................................................................................................................181613.0061361300000
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCTT.........................................................................................................................231592.0059240804163476
...........................................................................................................GTGCATTGTAGTCGCATT..............................................................................................................................................................................................181565.0056543406154115
...........................................................................................................GTGCATTGTAGTCGCATTGTCTC.........................................................................................................................................................................................231399.003993700101405
............................................................................................................TGCATTGTAGTCGCATTGTCT..........................................................................................................................................................................................211346.0034634600000
............................................................................................................................................................................AATACAACTGCAGTGCAAGC...........................................................................................................................201315.0031531103100
.............................................................................................................................................................................ATACAACTGCAGTGCAAGCT..........................................................................................................................201258.0025824900018
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCTC.........................................................................................................................231244.0024421818836
............................................................................................................TGCATTGTAGTCGCATTGTCA..........................................................................................................................................................................................211239.0023923900000
............................................................................................................TGCATTGTAGTCGCATTGTCC..........................................................................................................................................................................................211220.0022022000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCG..........................................................................................................................................................................................221218.002187204575026
...........................................................................................................................................................................CAATACAACTGCAGTGCAAG............................................................................................................................201205.002051621613617
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCC..........................................................................................................................221180.00180540441153
...........................................................................................................GTGCATTGTAGTCGCATTGTCAA.........................................................................................................................................................................................231174.001741083246168
...........................................................................................................GTGCATTGTAGTCGCATTGA............................................................................................................................................................................................201145.00145115381306
..........................................................................................................GGTGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................221134.0013411224943
...........................................................................................................GTGCATTGTAGTCGCATTGC............................................................................................................................................................................................201113.001131301941319
.............................................................................................................GCATTGTAGTCGCATTGT............................................................................................................................................................................................181109.0010910701100
...........................................................................................................GTGCATTGTAGTCGCATTGTAA..........................................................................................................................................................................................221107.0010763591947
............................................................................................................TGCATTGTAGTCGCATTGTT...........................................................................................................................................................................................20198.00989700001
...........................................................................................................GTGCATTGTAGTCGCATTGTTC..........................................................................................................................................................................................22287.00174156021006
...........................................................................................................GTGCATTGTAGTCGCATTGTCTT.........................................................................................................................................................................................23157.00575201121
...........................................................................................................................................................................CAATACAACTGCAGTGCAA.............................................................................................................................19156.00565300201
..............................................................................................................CATTGTAGTCGCATTGTC...........................................................................................................................................................................................18156.00564801052
...........................................................................................................GTGCATTGTAGTCGCATTGTCCC.........................................................................................................................................................................................23148.00484202004
...............................................................................................................................................................................ACAACTGCAGTGCAAGCT..........................................................................................................................18144.00444400000
...........................................................................................................GTGCATTGTAGTCGCATTT.............................................................................................................................................................................................19143.004318015703
............................................................................................................TGCATTGTAGTCGCATTGTCTC.........................................................................................................................................................................................22139.00393900000
............................................................................................................TGCATTGTAGTCGCATTGTA...........................................................................................................................................................................................20139.00393900000
..............................................................................................................................................................................TACAACTGCAGTGCAAGCT..........................................................................................................................19136.00363501000
...........................................................................................................GTGCATTGTAGTCGCATTGG............................................................................................................................................................................................20136.003617081001
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGT...........................................................................................................................21134.00342201605
...........................................................................................................GTGCATTGTAGTCGCATTGTCCT.........................................................................................................................................................................................23131.00312701300
............................................................................................................................................................................AATACAACTGCAGTGCAAGCTT.........................................................................................................................22130.00302801001
..........................................................................................................GGTGCATTGTAGTCGCATTGT............................................................................................................................................................................................21129.00291702109
................................................................................................................................TGTAT-------------------CC--TTTATTC-TCTGCGG................................................................................................................................................21128.00281404145
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCTA.........................................................................................................................23127.00272300040
...........................................................................................................GTGCATTGTAGTCGCATTC.............................................................................................................................................................................................19126.00262100302
...........................................................................................................GTGCATTGTAGTCGCATTGTG...........................................................................................................................................................................................21225.00503405821
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCA..........................................................................................................................22125.00251902031
.............................................................................................................................................................................ATACAACTGCAGTGCAAGC...........................................................................................................................19124.00242400000
..........................................................................................................................................................................GCAATACAACTGCAGTGCAAGCT..........................................................................................................................23123.00232300000
...........................................................................................................GTGCATTGTAGTCGCATTGTCAAA........................................................................................................................................................................................24121.00211430040
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCTG.........................................................................................................................23119.00191900000
.............................................................................................................GCATTGTAGTCGCATTGTCT..........................................................................................................................................................................................20119.00191800001
............................................................................................................................................................................AATACAACTGCAGTGCAAG............................................................................................................................19119.00191701001
...........................................................................................................GTGCATTGTAGTCGCATTGAA...........................................................................................................................................................................................21116.0016413422
...........................................................................................................GTGCATTGTAGTCGCATTGTCTG.........................................................................................................................................................................................23115.00151100400
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCTTT........................................................................................................................24115.00151202100
............................................................................................................................................................................AATACAACTGCAGTGCAAGCTC.........................................................................................................................22115.00151400001
...........................................................................................................................................................................CAATACAACTGCAGTGCATC............................................................................................................................20214.50291705304
...........................................................................................................GTGCATTGTAGTCGCATTGTCTCC........................................................................................................................................................................................24114.00141400000
.............................................................................................................GCATTGTAGTCGCATTGTCA..........................................................................................................................................................................................20113.00131300000
...........................................................................................................GTGCATTGTAGTCGCATTGTTA..........................................................................................................................................................................................22112.0012900111
.............................................................................................................GCATTGTAGTCGCATTGTT...........................................................................................................................................................................................19112.00121100001
...........................................................................................................................................................................CAATACAACTGCAGTGCAT.............................................................................................................................19112.0012700500
............................................................................................................TGCATTGTAGTCGCATTGA............................................................................................................................................................................................19111.00111100000
............................................................................................................TGCATTGTAGTCGCATTGTCAA.........................................................................................................................................................................................22111.00111100000
...........................................................................................................GTGCATTGTAGTCGCATTGTAAA.........................................................................................................................................................................................23411.00443231503
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCG..........................................................................................................................22110.0010312202
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCTTTT.......................................................................................................................2519.009800001
...........................................................................................................GTGCATTGTAGTCGCATTA.............................................................................................................................................................................................1919.009501201
.............................................................................................................GCATTGTAGTCGCATTGTCC..........................................................................................................................................................................................2019.009900000
...........................................................................................................GTGCATTGTAGTCGCATTGTCAT.........................................................................................................................................................................................2319.009510111
..........................................................................................................GGTGCATTGTAGTCGCATTG.............................................................................................................................................................................................2018.008700001
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCTTG........................................................................................................................2418.008800000
......................................................................................TCT-TTGGAGCTGTGACGGAG................................................................................................................................................................................................................2018.008510101
...........................................................................................................................................................................CAATACAACTGCAGTGCA..............................................................................................................................1818.008501200
droGri2
AAGCAGCTCGATGGAT-G---GCTGATAGAT----TCCTCTGCACAGTTAG-------------GG---CAGACA-----------TCTCCAGGAGCTGTCACGAAGGTGCATTGTAGTCGCATTGTCTGTCC-------------------AAAAATT--GC--ATGCGGCAATACAACTGCAGTGCAAGCTCCGTGCAGTTCACTAG-CAACAACT-CTTTGATC------GCTGATCGATCTGATCTCTCCC--------------------------------------------TTCGCT----C-C---SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
...........................................................................................................GTGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................2112855.0028552704151
...........................................................................................................GTGCATTGTAGTCGCATTGT............................................................................................................................................................................................2011094.001094937157
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCT..........................................................................................................................221923.00923797126
...........................................................................................................GTGCATTGTAGTCGCATTG.............................................................................................................................................................................................191375.003753714
............................................................................................................TGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................201211.002112110
...........................................................................................................GTGCATTGTAGTCGCATTGTCT..........................................................................................................................................................................................221209.002092018
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGC...........................................................................................................................211114.001141131
............................................................................................................TGCATTGTAGTCGCATTGT............................................................................................................................................................................................19179.0079790
...........................................................................................................GTGCATTGTAGTCGCATT..............................................................................................................................................................................................18170.0070691
............................................................................................................................................................................AATACAACTGCAGTGCAAGCT..........................................................................................................................21170.0070700
...........................................................................................................GTGCATTGTAGTCGCATTGTCA..........................................................................................................................................................................................22159.0059572
...........................................................................................................GTGCATTGTAGTCGCATTGTT...........................................................................................................................................................................................21148.0048435
............................................................................................................TGCATTGTAGTCGCATTG.............................................................................................................................................................................................18129.0029290
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCTT.........................................................................................................................23124.0024204
.............................................................................................................GCATTGTAGTCGCATTGTC...........................................................................................................................................................................................19116.0016151
............................................................................................................TGCATTGTAGTCGCATTGTCT..........................................................................................................................................................................................21113.0013130
...........................................................................................................................................................................CAATACAACTGCAGTGCAAG............................................................................................................................20110.001091
............................................................................................................................................................................AATACAACTGCAGTGCAAGC...........................................................................................................................2019.00990
...........................................................................................................GTGCATTGTAGTCGCATTGTA...........................................................................................................................................................................................2117.00752
............................................................................................................TGCATTGTAGTCGCATTGTT...........................................................................................................................................................................................2017.00770
............................................................................................................................................................................AATACAACTGCAGTGCAAGCTT.........................................................................................................................2215.00550
...........................................................................................................................................................................CAATACAACTGCAGTGCA..............................................................................................................................1815.00550
...........................................................................................................................................................................CAATACAACTGCAGTGCAA.............................................................................................................................1914.00440
.............................................................................................................GCATTGTAGTCGCATTGT............................................................................................................................................................................................1814.00440
...........................................................................................................GTGCATTGTAGTCGCATTGTCC..........................................................................................................................................................................................2213.00330
...........................................................................................................GTGCATTGTAGTCGCATTGTG...........................................................................................................................................................................................2113.00330
...........................................................................................................GTGCATTGTAGTCGCATTGG............................................................................................................................................................................................2013.00330
...............................................................................................................................................................................ACAACTGCAGTGCAAGCT..........................................................................................................................1813.00330
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCC..........................................................................................................................2213.00330
...........................................................................................................GTGCATTGTAGTCGCATTGTAC..........................................................................................................................................................................................2213.00330
...........................................................................................................GTGCATTGTAGTCGCATTGTTG..........................................................................................................................................................................................2212.00220
...........................................................................................................GTGCATTGTAGTCGCATTGTCG..........................................................................................................................................................................................2212.00220
................................................................................................................................TGTCC-------------------AAAAATT--GC--ATGCGG................................................................................................................................................2012.00211
...........................................................................................................GTGCATTGTAGTCGCATTGTCAA.........................................................................................................................................................................................2312.00220
.............................................................................................................GCATTGTAGTCGCATTGTCT..........................................................................................................................................................................................2012.00220
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCTA.........................................................................................................................2312.00220
.............................................................................................................................................................................ATACAACTGCAGTGCAAGCT..........................................................................................................................2012.00220
............................................................................................................TGCATTGTAGTCGCATTGTCA..........................................................................................................................................................................................2112.00220
..........................................................................................................GGTGCATTGTAGTCGCATTGT............................................................................................................................................................................................2112.00220
..............................................................................................................CATTGTAGTCGCATTGTC...........................................................................................................................................................................................1812.00220
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCTG.........................................................................................................................2311.00110
..............................................................................................................................................................................TACAACTGCAGTGCAAGCT..........................................................................................................................1911.00110
...........................................................................................................GTGCATTGTAGTCGCATTGTTGC.........................................................................................................................................................................................2311.00110
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCTAA........................................................................................................................2411.00110
.............................................................................................................................................................................ATACAACTGCAGTGCAAGC...........................................................................................................................1911.00110
...........................................................................................................GTGCATTGTAGTCGCATTGTCTGGT.......................................................................................................................................................................................2511.00110
..........................................................................................................GGTGCATTGTAGTCGCATTG.............................................................................................................................................................................................2011.00110
...........................................................................................................GTGCATTGTAGTCGCATTGTCTTG........................................................................................................................................................................................2411.00110
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGT...........................................................................................................................2111.00110
............................................................................................................TGCATTGTAGTCGCATTGTCG..........................................................................................................................................................................................2111.00110
...........................................................................................................GTGCATTGTAGTCGCATTGTCATG........................................................................................................................................................................................2411.00110
...........................................................................................................................................................................CAATACAACTGCAGTGCAAC............................................................................................................................2011.00110
............................................................................................................................................................................AATACAACTGCAGTGCAAGCTA.........................................................................................................................2211.00110
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCTC.........................................................................................................................2311.00110
...........................................................................................................GTGCATTGTAGTCGCATTGTTA..........................................................................................................................................................................................2211.00110
...........................................................................................................GTGCATTGTAGTCGCATTGTCTT.........................................................................................................................................................................................2311.00110
............................................................................................................................................................................AATACAACTGCAGTGCAA.............................................................................................................................1811.00110
...........................................................................................................GTGCATTGTAGTCGCATTGTCTGG........................................................................................................................................................................................2411.00110
............................................................................................................TGCATTGTAGTCGCATTGTCTC.........................................................................................................................................................................................2211.00110
...........................................................................................................GTGCATTGTAGTCGCATTGTGGC.........................................................................................................................................................................................2311.00110
...........................................................................................................GTGCATTGTAGTCGCATTGTGA..........................................................................................................................................................................................2211.00110
...........................................................................................................................................................................CAATACAACTGCAGTGCT..............................................................................................................................1811.00110
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCTTT........................................................................................................................2411.00110
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGAA..........................................................................................................................2211.00110
...........................................................................................................GTGCATTGTAGTCGCATTGTCTA.........................................................................................................................................................................................2311.00110
..........................................................................................................................................................................GCAATACAACTGCAGTGCAAGCT..........................................................................................................................2311.00110
...........................................................................................................GTGCATTGTAGTCGCATTGTCTGCA.......................................................................................................................................................................................2511.00110
...........................................................................................................GTGCATTGTAGTCGCATTGTCGTG........................................................................................................................................................................................2411.00110
...........................................................................................................GTGCATTGTAGTCGCATTGTCGTA........................................................................................................................................................................................2411.00110
................................................................................................................................TGTCC-------------------AAAAATT--GC--ATGCGGT...............................................................................................................................................2111.00101
...........................................................................................................GTGCATTGTAGTCGCATTGTGG..........................................................................................................................................................................................2211.00110
...........................................................................................................GTGCATTGTAGTCGCATTGTCTC.........................................................................................................................................................................................2311.00110
...........................................................................................................GTGCATTGTAGTCGCATTGTAA..........................................................................................................................................................................................2211.00110
.........................................................................................................AGGTGCATTGTAGTCGCATTGT............................................................................................................................................................................................2211.00101
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCA..........................................................................................................................2211.00110
...........................................................................................................GTGCATTGTAGTCGCATTGCA...........................................................................................................................................................................................2120.50110
...............................................................................................................................................................................ACAACTGCAGTGCAAGCTTG........................................................................................................................2020.50110
...........................................................................................................GTGCATTGTAGTCGCATTT.............................................................................................................................................................................................1930.33110
...........................................................................................................................................................................CAATACAACTGCAGTGCATCT...........................................................................................................................2190.11101
droAna3
AAGAGATTCTGCTGATTAGCGT--------A-------------CAGTGAGGTGGCCGAATACCAG---CAGACACTATACACCCGCCC-TCGGAGATGTCACGCAGGTGCATTGTAGTCGCATTGTCTGTCC-------------------CA--CTT--GC--TCCAGGCAATACAACTGCAGTGCAAGCTCTGTGCATTTCACAAA-CAACGCCA---ACTTTCACTGACACTGGC--------------------ATACGGTGCCGGAACTG-------------------------TG--A--A------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
...........................................................................................................GTGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................21135702.00357021751412311133577167811589
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCT..........................................................................................................................22119478.0019478597413218260129211802
...........................................................................................................GTGCATTGTAGTCGCATTGT............................................................................................................................................................................................20115641.0015641338214598260129066509
...........................................................................................................GTGCATTGTAGTCGCATTGTCT..........................................................................................................................................................................................2214114.0041141645135172621661889
...........................................................................................................GTGCATTGTAGTCGCATTG.............................................................................................................................................................................................1913280.0032802153628236119738
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGC...........................................................................................................................2112754.0027541221174111611021085
...........................................................................................................GTGCATTGTAGTCGCATTGTCA..........................................................................................................................................................................................2211662.0016626741815062412265
............................................................................................................TGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................2011383.001383137710014
...........................................................................................................GTGCATTGTAGTCGCATTGTT...........................................................................................................................................................................................211889.0088927211123101391
............................................................................................................................................................................AATACAACTGCAGTGCAAGCT..........................................................................................................................211570.0057044700210111
...........................................................................................................................................................................CAATACAACTGCAGTGCAAG............................................................................................................................201452.0045225641318170
...........................................................................................................GTGCATTGTAGTCGCATTGTA...........................................................................................................................................................................................211394.003949664271626165
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCTT.........................................................................................................................231359.0035993201138215
............................................................................................................TGCATTGTAGTCGCATTGT............................................................................................................................................................................................191251.0025125100000
...........................................................................................................GTGCATTGTAGTCGCATTGTCAA.........................................................................................................................................................................................231245.0024543751150012
............................................................................................................TGCATTGTAGTCGCATTG.............................................................................................................................................................................................181189.0018918900000
...........................................................................................................GTGCATTGTAGTCGCATT..............................................................................................................................................................................................181137.00137652132631
............................................................................................................TGCATTGTAGTCGCATTGTCT..........................................................................................................................................................................................211127.0012712700000
............................................................................................................................................................................AATACAACTGCAGTGCAAGC...........................................................................................................................201102.001029010119
...........................................................................................................GTGCATTGTAGTCGCATTGTCTG.........................................................................................................................................................................................23197.00979200113
.............................................................................................................GCATTGTAGTCGCATTGTC...........................................................................................................................................................................................19189.00898220113
...........................................................................................................GTGCATTGTAGTCGCATTGTCC..........................................................................................................................................................................................22177.007715493208
...........................................................................................................GTGCATTGTAGTCGCATTGTCTT.........................................................................................................................................................................................23173.007349101121
...........................................................................................................GTGCATTGTAGTCGCATTGTCG..........................................................................................................................................................................................22172.0072244711917
...........................................................................................................GTGCATTGTAGTCGCATTGA............................................................................................................................................................................................20170.007046223215
...........................................................................................................GTGCATTGTAGTCGCATTGC............................................................................................................................................................................................20166.006623412054
.............................................................................................................................................................................ATACAACTGCAGTGCAAGCT..........................................................................................................................20156.005641001311
...........................................................................................................GTGCATTGTAGTCGCATTGTAA..........................................................................................................................................................................................22149.0049111510319
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCC..........................................................................................................................22145.004562700111
............................................................................................................TGCATTGTAGTCGCATTGTCA..........................................................................................................................................................................................21144.00444200002
...........................................................................................................GTGCATTGTAGTCGCATTGTG...........................................................................................................................................................................................21143.00437115821
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCG..........................................................................................................................22134.003418000313
...........................................................................................................GTGCATTGTAGTCGCATTT.............................................................................................................................................................................................19132.00321202459
...........................................................................................................................................................................CAATACAACTGCAGTGCAA.............................................................................................................................19131.00311810318
...........................................................................................................GTGCATTGTAGTCGCATTGTCAAA........................................................................................................................................................................................24129.00298183000
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGT...........................................................................................................................21129.00292000423
............................................................................................................................................................................AATACAACTGCAGTGCAAG............................................................................................................................19125.00252200012
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCA..........................................................................................................................22120.00201700012
.............................................................................................................GCATTGTAGTCGCATTGT............................................................................................................................................................................................18118.00181700010
...........................................................................................................GTGCATTGTAGTCGCATTGG............................................................................................................................................................................................20116.0016800710
..............................................................................................................CATTGTAGTCGCATTGTC...........................................................................................................................................................................................18116.00161510000
...........................................................................................................GTGCATTGTAGTCGCATTGTAAA.........................................................................................................................................................................................23214.50297109111
................................................................................................................................TGTCC-------------------CA--CTT--GC--TCCAGG................................................................................................................................................18114.0014264002
...........................................................................................................................................................................CAATACAACTGCAGTGCA..............................................................................................................................18114.0014700304
..........................................................................................................GGTGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................22113.00131300000
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCTA.........................................................................................................................23113.0013701014
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGA...........................................................................................................................21113.0013400216
..............................................................................................................................................................................TACAACTGCAGTGCAAGCT..........................................................................................................................19113.00131100002
............................................................................................................TGCATTGTAGTCGCATTGTA...........................................................................................................................................................................................20113.00131300000
.............................................................................................................................................................................ATACAACTGCAGTGCAAGC...........................................................................................................................19112.00121200000
...............................................................................................................................................................................ACAACTGCAGTGCAAGCT..........................................................................................................................18111.0011730010
............................................................................................................TGCATTGTAGTCGCATTGTT...........................................................................................................................................................................................20211.00222100001
...........................................................................................................GTGCATTGTAGTCGCATTGTCGT.........................................................................................................................................................................................23110.0010000037
..........................................................................................................................................................................GCAATACAACTGCAGTGCAAGC...........................................................................................................................22110.0010640000
...........................................................................................................GTGCATTGTAGTCGCATTC.............................................................................................................................................................................................1919.009600003
.............................................................................................................GCATTGTAGTCGCATTGTCT..........................................................................................................................................................................................2019.009900000
............................................................................................................................................................................AATACAACTGCAGTGCAAGCTT.........................................................................................................................2219.009700002
...........................................................................................................................................................................CAATACAACTGCAGTGCAAGCTC.........................................................................................................................2318.008300104
...........................................................................................................................................................................CAATACAACTGCAGTGCAT.............................................................................................................................1918.008200204
............................................................................................................TGCATTGTAGTCGCATTGTCTG.........................................................................................................................................................................................2218.008800000
...........................................................................................................GTGCATTGTAGTCGCATTGAA...........................................................................................................................................................................................2118.008100124
...........................................................................................................GTGCATTGTAGTCGCATTGTCTC.........................................................................................................................................................................................2316.006110103
...........................................................................................................GTGCATTGTAGTCGCATTGTCCA.........................................................................................................................................................................................2316.006015000
...........................................................................................................GTGCATTGTAGTCGCATTGTCTGT........................................................................................................................................................................................2416.006410010
...........................................................................................................GTGCATTGTAGTCGCATTGCA...........................................................................................................................................................................................2116.006021111
............................................................................................................TGCATTGTAGTCGCATTGA............................................................................................................................................................................................1915.005500000
droBip1
AAGAAAGTTTGAAGATTT---TTTGAT------------------AGTGAGGTGACCGAATACCAG---CAGACACTATTCACCCGCCT-TCGGAGATGTCACGCAGGTGCATTGTAGTCGCATTGTCTGTCC-------------------CG--CTT--GC--TCCAGGCAATACAACTGCAGTGCAAGCTCTGTGCATTTCACAAA-CAACGCCA---CCTGTC------ACTGGC--------------------ATAAGGTGCCGGAACTCTCCAAACT-----------------AATCA-----G---SizeHit CountTotal NormTotal
No Reads
droKik1
AAGATC-----------ACG----------GCA-----------GAGTGAGTT----GAGTGACACCCACAGAA--CG--------CCT-CCGGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTTTCCCAAT--------------A--TAT--CC--TCCAGGCAATACAACTGCAGTGCAAGCTCTGTGCATTTCACAAG-CAACAATG---CT-------------CTTTCCTTT--TTAGTTTTTGGGAAACCGTGTATG---CC------------------------TTA----AAT-C---SizeHit CountTotal NormTotal
No Reads
droFic1
AAGAAAGTCTGCATC-CT------GACAAAT----TCA-----------TGGTGACCGAATGCCAG---AGGACTCTT--------CCA-ACGGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTCC-------------------CA--ATT--GC--TTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACAAA-CAACGTCA---ATTGTC------GCTGGC--------------------AAAAGTCGCCAAGTTTT-----------------------------AG--------SizeHit CountTotal NormTotal
No Reads
droEle1
AAGAAAGACTGCACC-CT------AATACACCAGCCAG-----------TGGTGACCGGATGCCAG---CAGACTCTT--------CCT-CCAGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTCC-------------------CA--CTT--GC--CTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACAAA-CATCGTCG---ACCGTC------GCTGGC--------------------AAAGGTCGCCTG--------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
AAGACAGTCTAAACC-CC------GATCAACCAGCCAA-----------TGGTGACCGAATGCCAG---CAGACTACT--------CCT-TCAGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTCC-------------------CA--CTT--GC--TTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTTACAAG-CAACGCCG---ACTGTC------TCTGGC--------------------AAAAGTCGCCAG--------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
AAGAAAGTCTGCAGC-CC------GATCAGTTAGCCAA-----------TGGTGACCGATTGCCAG---CAGACTCCT--------CAT-CCAGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTTC-------------------CA--CTT--GC--CTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACAAA-CAACGCCG---ACTGTC------TCTGGC--------------------AAAAGTCACCAAGTTTT-----------------------------AG--------SizeHit CountTotal NormTotal
No Reads
droTak1
AAGAAAGTCTGCACC-CC------GATCAGGCAGCCCA-----------TGGTGACCGAATGCCAG---TTGACTCCT--------CATCCCAGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCC-------------------CA--CTC--GC--TTCAGGCAATACAACTTCAGTGCAAGCTCCGAGCATTTCACAAA-CAACGCCG---ACAGTC------GCTGGC--------------------AAAAGTCACCAAGTTTC-----------------------------AG--------SizeHit CountTotal NormTotal
No Reads
droEug1
AAGAAAGTCTGCTCC-CC------GATTAAACAGCTAT-----------TGGTGACCGAATGCCAG---CAGGCTCTA--------TCT-CCAGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTTC-------------------CA--CTT--GC--TTCAGGCAATACAACTTCAGTGCAAACTCTGTGCATTTCACAAA-CAACGCCG---ACGGCC------TCTGGC--------------------AAAAGTCGCCAAGTCTG-------------------------CA----AAG-G---SizeHit CountTotal NormTotal
No Reads
dm3
AAGAATGTGTGCACC-CC------GAACAATCAGTTTT-----------TGGCGACTGAGTGCCAC---CAGACTCTT--------CCT-CTGGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCC-------------------CA--ATT--GC--TTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACATA-CAACGCCG---AATGTC------TCTGGC--------------------AAAAGTCGCCAAGTTTT-----------------------------A---------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
...........................................................................................................GTGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................2112654162.00265416200007226912412141666662234618013016302188216193205386545022224117234618984874283792142114253168966182161046592716200149834751553126322347876349939168361743346823351261209000000000000000002108823891163982290895257361171213116017261453342313941158119938763239922063021279035412184421247657148558083642243632329549244918522145301426812315475365065875754013627469777712773672107488313921597377149223959611024281510262594174746285106963797391663534834201658612251469851735291997167172690315677112940826811663584068439742190466702255916940391971313972942830134942941113613415373568509307723988632964631149244713326215631439912413718522399361006169379427431004419342099493031388143814646870214327991624016598452763210719396155723644519330093299921449441095992104132419633196976461128241625942791256899374309554274581232285131087924015134271630723673321601461258058258747590081017335072562292131397197532412426461172311157134666328421656721412186874117192891517519344173193228414223223283019611233213501097043478405315587402464202112364741780263519139152161849345108943212625709421207661119827682536183897713430955135411281576133383574549811779510133993028201107
...........................................................................................................GTGCATTGTAGTCGCATTGT............................................................................................................................................................................................201695613.0069561300002725512011230113002705836580337581511092627234418662026664274191638173316107880381385117607261235431133743662613641404301719514140000000000000000065567287520672023215212343986393581321212527926197961603260142599211495964247719791783122210302199122431970617241924440812526186119226042673473122381611443147583228881463443557689134911998801287228159366310357251438523523172922266910993423524353121830283727314927622407783274712064844048693575341822625925211481344923911991735507621015142791341210309850223340151183213184512181963493827152617772451359270361709237192263713110588359531423001771887994232753294640142102925242445352947125857625368125113552246451127082770590231804444965188767587279025286203102053410588121753421298219437861511035222520282053277516732456471163768068796775703312330993419795523507992818687615903360621642582123822143307113231947431463061450329713727220575326884136284213512444306183650712514755208014641667149635631796272701082211
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGCT..........................................................................................................................221138451.0013845100004401011103815521900362710893438165582244239216245432480428193499356961389066809188105210761104200251114000000000000000004485043465041025501421119193104502244233880223281118122082714455211261951512107324651306156011592513591133446200250118331071547036902532331741934751591721682201211062496338137817936053210771779090612006322952725931762695133261869942081550294524896164251575411300122167170300051149002200916762558216308936452717718611552533170267110228912201148318100053631471341397092274374435842055841583014304103114282910236808771046280679262431810633821492818589336113222541194249101932218181175287356649334701490551585837101286545337494916944364153594674840346457018698283632111711009540383122222106924269841644441035527227399347326263428073311444061830
...........................................................................................................GTGCATTGTAGTCGCATTGTCATC........................................................................................................................................................................................24190524.009052400000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000004709743423000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCT..........................................................................................................................................................................................22167206.006720600000101101004003310213510092438205634225111029225920251243292997220173811627431221270401300950000000000000000096811377791013113005331152000113313110142901191012625313180130129630744210063157922833443836600310122034284612510017256373911278598510852525335455237561324726658431221060718959330560378241009228130281242099562756125115463720156241131490111134141310000111705183221760372504462924320484181868625121274229250012618226900617109552687531291569718033036799128127417672324512482363576944771459333172312306671085332161106866325233148949446478623514813928047677981249109314517340841456916528094602078673100243616325493717716514744119283113148171161685312067022110417517660420811064105729
...........................................................................................................GTGCATTGTAGTCGCATTG.............................................................................................................................................................................................19151755.00517550000000000000000050010407402513348261534123379715151254131812862924303179169436193000758428102000000000000000003543932863982174107173401730314131701112330534013415323261520179138440501618140851190109191330210002729126153268115553541272797247352323211312147165029301023590801001076012338717046631257160197354410201456132259410718700110099493000182600510066384011428791797929223440110314332413521123836308574001412619260440071160524648514732662966304149562148541235205281862836126396193747454120311208971221334132733372051127961714123346220615261381363510351591126316128235764419419867245531157114386810622251853633435112743817816943391703911069833820026133075770
...........................................................................................................GTGCATTGTAGTCGCATTGTCA..........................................................................................................................................................................................22151346.0051346000010541000000001004740900044000000011073530651924712234200322752364891853013445000000000000000000000001511591301441182331033274301000013000057042228340102002015688160592381431071220826338258101317102107854034026562574234821183240186136210581566310491011201401110127700753041298358284192798699187871910103911608151812011315411171717911002108370014100412691894761177476716898396906585132321484506296956950020140180252204680211213452104061328920151362451854722447103191501232994102755534285314426280292205111367234125566451060174148586920120021644771580158815025511531486874113183427612231478199150572622121286311216160471245977818512414518994173033599
...........................................................................................................GTGCATTGTAGTCGCATTGTCTG.........................................................................................................................................................................................23144958.004495800001000001003000010252090025621202551369322241429414351652346148828324310542101160001317531000000000000000002963672693290101022418000201650100320936911152331020134060550130252312225812877901001626212491126234253511574996885975876523141681337677082176267207024348239213075155251807512228401130675355527529552011582425400003745011100194179821052912313131404015043031501882651811392060100918949189314194192012339130068574187212177228512623630021118683644339143670410932403467530849264103748472651279606338649519058523868399207190329720211944021230103587361372873312610361182699315452520266172195165185553582621762961177423412577832313884336175186
...........................................................................................................GTGCATTGTAGTCGCATT..............................................................................................................................................................................................18114439.001443900000000000000002300304600010810594291491102571121086333561510001350000000000000000001291318115945010062532203103231014002990228365993928030173122402041101815623162314891613000022191082006837292028445002004441622181665002125502514101014421060404443370811502600118628516410079024003110771610000054272043106810740714264754798931157148731000545293451072520647884102110512336491529657110250216018420816011544115309739625343783412779661961741641578334324474071218253113271135414401230518192295216716175890
...........................................................................................................GTGCATTGTAGTCGCATTGTT...........................................................................................................................................................................................21114207.00142070000420101001100500071940014152000000002612551378877159210716672810100000000000000000000061563888910001620011000005000617157713120101000012937914402716332102103191232223058543281205520241314404914410231281210206896263079391439811066625183250114241717332474220143100321200001003120000003798128111252394370363915781171513183120031210687115171160858027858441031321815216230397462631051161996841805533392471354450272956383552865160212883170184108192305341285721361081333283522431517211203117430442125194820921467219631224202725724631192560
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGC...........................................................................................................................21113982.001398200001010000000136460010425010102010785111202270362192544121897300000000000000000000000109132881244006121216004301711500314200295453501427100143077240123041521211001101023601966125921730400382775926314261850111102344257138571244203191493543279188505000702010001000000007871721316513226755648211779332196418803391000013818211474846646180124585455721255455348208512330812975398070177774381457145791832123529991317113811421044526123163043121282614340924162511510132023298642541115721081040
...........................................................................................................GTGCATTGTAGTCGCATTGTCAA.........................................................................................................................................................................................23112037.00120370000000000000000000010245000200000000441912113361079646992132222932660000000000000000000000065360294931100000100000000000001000006001708000051509113900464445241723110325035811910545201211587135173480000100000024330210046390210230001012031259820212619000015326560030000094301922191961752465301467162002120010601874604520714414124284491882221937312314310124530619113492613518542463723318010307739567279411152208386995124450038350221732117307304711330
...........................................................................................................GTGCATTGTAGTCGCATTGTA...........................................................................................................................................................................................21111604.001160400005001000004001500172210028980000000463113813778184130958186721352000000000000000000000058634196022104911001300503000230161241462110000236688094034214803711762911112946631310151934402693314241828109361031182270112913507552164510070541316314517424542131268142476300612209031214000000412913691071439315298573425399471577130025125605010977415920111345104150321634118038417150627574161131384303174813512443236621044492465222143107571276184898337340520448024502026123328424144746172121454107218332238930133215211018157110832
................................................................................................................................TGTCC-------------------CA--ATT--GC--TTCAGG................................................................................................................................................1818645.00864500000000000000101900409080200922521000122822199186144918122362167000000000000000000000001623121021132763552464119162318214120202615384202407775181741415090163017315190000000100441012256723602637842191210132030243412260420002222593171660175139170103129161008028200000200402100020131111155346148479431624162256054122252000047571651984784855164110581328019621513927015557963365364314810016330117333128291311530107961344739599122239203510710793870410441411313119307493243030010710343512125169115300
...........................................................................................................................................................................CAATACAACTTCAGTGCAAG............................................................................................................................2015111.0051110000100000000002515000218181123964144532420100116153002300000070100000000000000000101591300000011101010010000000181941400001002272101190002200010000000011001312391646003471551010826106391090791371527515103152274393232762251100020290000011000000314537511344769417532425300000001545422534215367815322291621336193320115192193816317345392218422935542191461566271872327441013134612272147022433108102185681311917335158456441072097106142980
.............................................................................................................................................................................ATACAACTTCAGTGCAAGCT..........................................................................................................................2014471.0044710000000000000000000000000000000000000000000000000000004409000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000013000000000002100100010010000000010000000000000000000000000100000001000000101111000000000000001000101110000180103000311001100000000000000060000100000000000000000010010
...........................................................................................................GTGCATTGTAGTCGCATTGG............................................................................................................................................................................................2013669.0036690000000000000000000000000180000000400100013002301220100000000000000000000000512060000000010000010000001017126000000300641101210727211000200000005110002002301100000300100437101000910350252202201310104811831222000200000000000000004311013031142000142026000001165252714510714232139614177233099311624551053828539341097163818142221816414337205576597133027724617410101591157122170010215000011101000226100
...........................................................................................................GTGCATTGTAGTCGCATTGC............................................................................................................................................................................................2012570.00257000000000000000000000000101600000006013101203023127112000000000000000000000004841412000002000000001000100846300000001133000012090231000000000021515010705542310000030042135490221026115803068405000211534402000201000000000000005324014114121112200810000002810151779103111152253421120392216304894033262101720742214245241234534104329343060417011103429165512457843861119701442421842021023201143419160
...........................................................................................................GTGCATTGTAGTCGCATTGTG...........................................................................................................................................................................................2112568.0025680000000001010000010002200425000000000000313550002078742130000000000000000000000007132500000001000200110000030992400000000018260240721503016500211000522110102343412200000031300026210123321718824712442532000292110000410000000020000000111040548523311343100000109622753717625157121910123101072614241717863810610651229477212944180101853151510221138261711003801804462311820312202201101100220110015950
...........................................................................................................GTGCATTGTAGTCGCATTGTCG..........................................................................................................................................................................................2212473.00247300000000000000000000131000140000000052628110522905234100000000000000000000000013910800000000000000000000000032000000000060000100012220055311000941300101510173182427300000400200152407105416021316000060160103130000108000002140200001100182824125935571004210011021161502217411122334012161457174426229389171114971257211546315291338252116384454023134513691211212182110115522181316911241911240139420152713181232417220
...........................................................................................................GTGCATTGTAGTCGCATTGTCC..........................................................................................................................................................................................2212194.0021940000000000000000000022000040000000031201065514121595010430000000000000000000002625182200030130000000110000200306120000100135061303310275362701152802106072141214716110211070000030000030280130110355013141690030057110100000000000043000000200124003525203742281426302526270000053123672514113514413122650289195918121232153927122764536910101218781131097810604062181818160810304610122251214332201220613142212190
...........................................................................................................GTGCATTGTAGTCGCATTGTCTGT........................................................................................................................................................................................2411668.00166800000000000000000000011000003144001211200011020121030000321490000000000000000027341920000000200000000020000006487000000200260400110622300000010000136244212500050200000200013110130046163717110031012011100000200000002000000451232110815238137912018100010011083014331132019454121213261666615174691232853121123551224920143117111001172927515511551968255281221111838213277310282249825162231490
............................................................................................................TGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................2011554.0015540000000000000000000005010021850000001320001000000170103028010000000000000000000915760100002000100000000000033640000001010100010000032000100120100100160618005000040710706233154051589174122619465225125323761040062130000023000000482621253101053210913102000001112121206111002006062544464106441332094191272721422054951300111051801120215121131336415844617139084322127134
...........................................................................................................GTGCATTGTAGTCGCATTGTAA..........................................................................................................................................................................................2221360.002720000000000000000000007900004000000046217380151821914793510000000000000000000000049640110012000000000000000000031000020000120000110013131150020010161002047110312111418218511031000000000200515401200416021044054200000522193110000010020007390000000014011103017136561011810051100320533330213235191222114481812322224314125302058284227711519522151014215550013174710484012523355139172202022110610141131201165140
...........................................................................................................GTGCATTGTAGTCGCATTGTCAT.........................................................................................................................................................................................2311345.001345000000000000000000000000000000000000000000000000100000000000000000000000000020120003000000000000000000000000000000001000000001212000100000001400003120000000000000000450200010005040000000000000000100000011000000000000021106244181000620586000000101001300010110100101020000101010212022010010310000010100000000001000000010000100000000110
............................................................................................................................................................................AATACAACTTCAGTGCAAGCT..........................................................................................................................2111296.00129600000000000000000000000101392361160101020100312120311310000000000000000000000013181270000000000000000000000000020000000001101000000001010000000002202232146200100000170117052330018231001739141556063415000011010000010000002200000047424001555151114827333130000001035152401113432106410523603111731147343243191181743231240250000903801040133201128612525116230264222110171517260
...........................................................................................................GTGCATTGTAGTCGCATTGA............................................................................................................................................................................................2011253.0012530000100000000100000000000010000000100100101001001400100000000000000000000000627900000002400000000000110131011000000081704011240422211000000000003400012413000000000300100265301600181100403730400000201120000200700000000000001013101073132301530021020000034141174432515034011413552121781412119221070658831161610132091013190000358122131922283224341310115460311321030215780
......................................................................................CCT-CTGGAGATGACACGAAG................................................................................................................................................................................................................2011086.0010860000000000000000000001000000000000010000002000000100100002100000000000000000000000000094000000000000100971151200003001100000000000000002000000000120101113300000300100100000000000000010000000100010000000000000000192420321210000101600600001011002351110105121060131371977103831015673000000012345913710122202430310314310241010123105055573443342472260610000217144580
...........................................................................................................GTGCATTGTAGTCGCATTGTCTT.........................................................................................................................................................................................2311010.001010000002000000000000001000001000000000301013000310101320000000000000000000000011641000000020000000100000000202000000000043010102013017150030000200020001340240001002022222007540813123428581001405401100010100000024000000611000013352623800400000007910463747336832352613135135676210271940152865303010703626091213000001260012011751011001012102047100121110570
.........................................................................................................................................................................GGCAATACAACTTCAGTGCAAGC...........................................................................................................................231956.0095600000100001002000400000000002000000000000000000004020000000000000000000000002022011201389111101235001523017610819496131411001000000000000000100000000000000002102000701000010310021001000032000003000200000000000000000000000000121000010001020000000000005254202003482110610551106220251000102001021420020000823100050090020030000400000001010161730
...........................................................................................................GTGCATTGTAGTCGCATTGTCAAA........................................................................................................................................................................................241929.009290000000100000000000001000000000000030010091104011001000000000000000000000000020200000000000000010000000000000000000000000001000000000120150224556014811302020000000000002100000010100000000000701000000010000211002000000000044262921531603116300000000310000000000000000000000000000001022737338150000010105310022516000000915480000000000000031029000020
..............................................................................................................CATTGTAGTCGCATTGTC...........................................................................................................................................................................................181883.008830000000000000000000031000011092401000100000002103101000000000000000000000000687810000111000100200000220023010000000000000000000000024000002001003145778300000011401819892203064144112017100240811081201000500400000002000002219923631033001213520000201000220001010100070311351103111182316592124162621671661010131021532816101115210302885148484131012331122720
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGCTT.........................................................................................................................231848.00848000000000000000011000013022000000000000101001000021000000000000000000000000024210000001200110000000009010550610002000000000000100000000000003100003106020200000130500047500320481241990181001080010400401000000000000007010300401161203206320000010401370304322221001224512331131121946716291615100931464890011500100121012401116344471135607187024323231611380
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGCTA.........................................................................................................................231828.00828000000000000000000001312010000000001081121161604121200000000000000000000000022020700100200000000000000000302000000000000000000000000000000071830376611390100900000400150450100004011230010200161200001000000011100000022000106216217261841013000020100104020100310011105201244424010671979141135154121001212100115170400008132126133004010002103422831390
...........................................................................................................GTGCATTGTAGTCGCATTT.............................................................................................................................................................................................191796.00796000000000000000020000000000000000000000011000000000000000000000000000000000034350000000210000010000001301043010000000610000000607300020000001020101403300000000000210475605001113025400200074020000602000000000000001010000011310241002000000038491513514311094021201284230071837716112566100000101212105703610110200104311800013000030000013010000210030
.........................................................................................................................................................................GGCAATACAACTTCAGTGCAAG............................................................................................................................221607.006070000000000000110000000000000200000000000000000000000000000000000000000000000000000000080101000000000400333185211500003000000000000000000000000000000000000000000000456000000001001002000003100000010000000000000000000035130001000000000020000000000331111001031831000300125120221905200002000010121400010000371010011001911110110011442212000212100242110
...........................................................................................................GTGCATTGTAGTCGCATTGTCAC.........................................................................................................................................................................................231587.00587000000000000000000000000000000000001010003100101510100000000000000000000000021000000000000000000000000020000000000001000000001000002310000005221201020100000000000000110000000000000000000000000000000000001000000000000020210211001024623700000011001001000000000000000000010011302214010000010002000002110000000011000000000000000000000000
.............................................................................................................GCATTGTAGTCGCATTGTC...........................................................................................................................................................................................191569.005690000000000000001000013000021100000001100000000110201000001100000000000000000123700000000000000110000000433100000000001000000000102110000030000000221210083000311705250630111131018512422370611939122005010000000100000040123510115000100030000720113121002011004010513142634443110740832716112201320303010002122010327131521001000001000500019420
..........................................................................................................................................................................GCAATACAACTTCAGTGCAAGC...........................................................................................................................221514.005140000000000000001010000010000000000000000000001000000000000000000000000000000384123351000001214000000120000030212692231110001000000000010000000000000000100001001110000000000610000000001020000000200300010000000000000000000000000102012010023470000000000603011012311000103001051210001134030010203100410004001000100297002100020300100000000102000
...........................................................................................................GTGCATTGTAGTCGCATTGTCTC.........................................................................................................................................................................................231431.004310000000000000000000000000010000000000100000000000000000000000000000000000000242400000001000000000000000000000000000000000000010000010000000000000011010000000000000001300000000000010000040000000000000000000000000000000011010020100150185000000021010000120210022131313031040030102000010101030000003110000061000000000000000000000003000
................................................................................................................................TGTCC-------------------CA--ATT--GC--TTCAGGT...............................................................................................................................................191400.0040000000000000000000100110000000000000100031010011002111000000000000000000000000010010001000000000000010001232000010000100100000010000000000000000014120003600000000000002010020111116091050010000000000100000000000000010411012113487818526150000001001002012111003201000111000143000302130032362403200102010320100100010010010001010001212510330
...........................................................................................................GTGCATTGTAGTCGCATTGGA...........................................................................................................................................................................................211391.0039100000000000000000000000000100000000000000000000000200000000000000000000000000002000000000000000000000000100000000000010300030105000100001000000000100000100000000000051000001000132719600000300000001000000000000000000000000000000000020000000103220002021000023131231361611301152110122832361618102756700000001112321010000000000000000000000000200
...........................................................................................................................................................................CAATACAACTTCAGTGCAA.............................................................................................................................191385.0038500000000000000000000000000010000000100000000000001000000200000000000000000004226000001001000000010001018599010000100100000010001100000000000100000010000000003000205081140401031002000000010010040000000000000000100701011000100000500200001000032111230550210303413107293472010001002716731810100100100100090000201001101000300000448020
...........................................................................................................GTGCATTGTAGTCGCATTGTAAA.........................................................................................................................................................................................233382.001146000000000000000000003110000000000002173411310040041100000000000000000000000000000011000000000000000000000005000000000000001010002300003000008234511102011215011001000020000033020001030204000000314180000000000001434000000000100082411711584910000000011000000001011700000000000300020301793017211531701000411125100144290342000102136127100000000000023827002050
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGCC..........................................................................................................................221342.00342000000000000000040000000020000000000200011100040011000000000000000000000000021000000001050000000000000102100110000000000000000002000000000000100010001100000000108210116041101401227005100010000000000000000000000002050010002101000541000000102091401110111202031621016662111102050047571011330000503220150017010010131011002001000005610960
...........................................................................................................................................................................CAATACAACTTCAGTGCA..............................................................................................................................181310.0031000000000000000000000000000000105000000000000000000000000000000000000000000006627000000140010001020000004691710010010000010000001000011000000000000000000000010300001000980200061007042040000000000000000000000000000000000000000000926200000000101000120615540310004103452300000000001200232430000210000100060000000000000000000000002110
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGT...........................................................................................................................211309.003090000000000000000000000200100000000000000001000000000000000000000000000000000102200000000000000000000000000000000000000000000000000000000000101000010000000000000001000011001001120000300010200003000000000000000400000000000000000038521000001125825050011300041113100381200101005030011808123400010122000310127440041111030221090001112434100
droSim2
AAGAATGTGTGCACC-CC------AAACAATCAGTCAT-----------TGGCGACTGAGTGCCAC---CAGACTCCT--------CCT-CCGGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCC-------------------CA--ATT--GC--TTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACACA-CAACGCCG---AATGTC------TCTGGC--------------------AAAAGTCGCCAAGTTTT-----------------------------AGAAGCG---SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
...........................................................................................................GTGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................211773147.00773147475699167971481651190286741679747594236252217721291695248771100519540665
...........................................................................................................GTGCATTGTAGTCGCATTGT............................................................................................................................................................................................20128084.0028084442219272161671267610153012341888118543471571937656927889
...........................................................................................................GTGCATTGTAGTCGCATTGTCT..........................................................................................................................................................................................22117934.00179349362405420052018255269760371550525535591781313
...........................................................................................................GTGCATTGTAGTCGCATTG.............................................................................................................................................................................................19116943.00169433330161312463735187010453840314282011724121
...........................................................................................................GTGCATTGTAGTCGCATTGTCAA.........................................................................................................................................................................................23116589.00165898319135001386129876275628179742239000
...........................................................................................................GTGCATTGTAGTCGCATTGTCA..........................................................................................................................................................................................22113618.0013618261211606707430091284524912017807411739202306
...........................................................................................................GTGCATTGTAGTCGCATT..............................................................................................................................................................................................1819309.0093093331681224191237823632203529360153010
...........................................................................................................GTGCATTGTAGTCGCATTGTA...........................................................................................................................................................................................2116643.0066434058176136683004941744250254549000
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGCTC.........................................................................................................................2313552.00355200001354219800000000000
...........................................................................................................GTGCATTGTAGTCGCATTGTT...........................................................................................................................................................................................2112377.0023771399670277500238873239116000
...........................................................................................................GTGCATTGTAGTCGCATTGTCTG.........................................................................................................................................................................................2312054.00205447931767246234211197543817523207164209
...........................................................................................................................................................................CAATACAACTTCAGTGCAA.............................................................................................................................1911836.0018360001718111600001000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCC..........................................................................................................................................................................................2211812.0018121298412371800912974303000
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGCT..........................................................................................................................2211506.0015062017127351132241554520401422914138000
............................................................................................................TGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................2011499.00149939092399553841403000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCAAA........................................................................................................................................................................................2411168.0011680011400129122510363111161000
...........................................................................................................GTGCATTGTAGTCGCATTGTAA..........................................................................................................................................................................................222945.0018904118161300123938575775767613000
...........................................................................................................GTGCATTGTAGTCGCA................................................................................................................................................................................................161869.008690000001719918802000013
...........................................................................................................................................................................CAATACAACTTCAGTGCA..............................................................................................................................181850.00850000133851001000000000
................................................................................................................................TGTCC-------------------CA--ATT--GC--TTCAGG................................................................................................................................................181841.008411155204952294012133800000
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGC...........................................................................................................................211817.0081753703927540965125627000
...........................................................................................................................................................................CAATACAACTTCAGTGCAAG............................................................................................................................201772.00772530530743621042601000
...........................................................................................................GTGCATTGTAGTCGCATTGTCG..........................................................................................................................................................................................221624.006243031924250069171224572000
...........................................................................................................GTGCATTGTAGTCGCATTGG............................................................................................................................................................................................201584.005843172391640010005002000
.............................................................................................................GCATTGTAGTCGCATTGTC...........................................................................................................................................................................................191542.005421518910258691121121100000
...........................................................................................................GTGCATTGTAGTCGCATTGTAAA.........................................................................................................................................................................................233447.33134223380012612865440041121000
..............................................................................................................CATTGTAGTCGCATTGTC...........................................................................................................................................................................................181377.003772335943603001230000000
...........................................................................................................GTGCATTGTAGTCGCATTGC............................................................................................................................................................................................201337.00337234709100001118111000
...........................................................................................................GTGCATTGTAGTCGC.................................................................................................................................................................................................151336.003360000001012332000000
...............................................................................................................ATTGTAGTCGCATTGTC...........................................................................................................................................................................................171304.003040000001211299000000
...........................................................................................................GTGCATTGTAGTCGCAT...............................................................................................................................................................................................171214.002140000000513199002103
...........................................................................................................GTGCATTGTAGTCGCATTGTG...........................................................................................................................................................................................211213.00213784156000420080411000
............................................................................................................TGCATTGTAGTCGCATTGT............................................................................................................................................................................................191131.001315101190000103002000
..............................................................................................................CATTGTAGTCGCATTGTCT..........................................................................................................................................................................................191100.001007027300000000000000
...........................................................................................................GTGCATTGTAGTCGCATTGA............................................................................................................................................................................................20198.009823190700101460136000
...........................................................................................................GTGCATTGTAGTCGCATTGTCTGT........................................................................................................................................................................................24197.00972202021715145111222101
...........................................................................................................GTGCATTGTAGTCGCATTGTCTT.........................................................................................................................................................................................23185.0085242201000102111221000
...............................................................................................................ATTGTAGTCGCATTGTCT..........................................................................................................................................................................................18183.00835022300000008000000
...............................................................................................................ATTGTAGTCGCATTGT............................................................................................................................................................................................16175.0075000000001074000000
............................................................................................................TGCATTGTAGTCGCATTGTCT..........................................................................................................................................................................................21174.00742761390000001000000
............................................................................................................TGCATTGTAGTCGCATTGTCA..........................................................................................................................................................................................21170.0070210640000111000000
................................................................................................................TTGTAGTCGCATTGTCA..........................................................................................................................................................................................17361.00183000000001231140000000
...............................................................................................................ATTGTAGTCGCATTGTCA..........................................................................................................................................................................................18257.001142030001026100000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCTAA........................................................................................................................................................................................24154.00540000003320270010000
................................................................................................................TTGTAGTCGCATTGTC...........................................................................................................................................................................................16253.001060000002002102000000
............................................................................................................TGCATTGTAGTCGCATTG.............................................................................................................................................................................................18151.0051410430300000000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCTGA........................................................................................................................................................................................24140.0040212030084310016000
...........................................................................................................GTGCATTGTAGTCGCATTGTCTAAA.......................................................................................................................................................................................25139.0039000000542280000000
.............................................................................................................GCATTGTAGTCGCATTGT............................................................................................................................................................................................18138.00380111510000118001000
............................................................................................................................................................................AATACAACTTCAGTGCAAGCT..........................................................................................................................21133.0033000261000014001000
...........................................................................................................GTGCATTGTAGTCGCATTGTCCA.........................................................................................................................................................................................23131.0031000100221490120000
..........................................................................................................GGTGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................22131.003192190200006020000
...........................................................................................................GTGCATTGTAGTCGCATTGAA...........................................................................................................................................................................................21130.003043000012674003000
...........................................................................................................GTGCATTGTAGTCGCATTGTCTA.........................................................................................................................................................................................23126.002625250000420033000
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGCTA.........................................................................................................................23125.002500050000145127000
............................................................................................................TGCATTGTAGTCGCATTGTCTG.........................................................................................................................................................................................22124.0024210180020001000000
...........................................................................................................GTGCATTGTAGTCGCATTGTTAA.........................................................................................................................................................................................23122.0022110000103121300000
...........................................................................................................GTGCATTGTAGTCGCATA..............................................................................................................................................................................................18121.0021132010010004000000
...........................................................................................................GTGCATTGTAGTCGCATG..............................................................................................................................................................................................18120.0020132000000005000000
................................................................................................................................TGTCC-------------------CA--ATT--GC--TTCAGGA...............................................................................................................................................19119.001910000069300000000
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGCC..........................................................................................................................22119.0019142200000001000000
...........................................................................................................GTGCATTGTAGTCGCATTT.............................................................................................................................................................................................19119.0019100500000000013000
.............................................................................................................GCATTGTAGTCGCATT..............................................................................................................................................................................................16118.0018000000000018000000
.........................................................................................................................................................................GGCAATACAACTTCAGTGCAA.............................................................................................................................21118.0018000071100000000000
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGCTG.........................................................................................................................23118.0018122310000000000000
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGCTT.........................................................................................................................23118.0018600100000001001000
...........................................................................................................GTGCATTGTAGTCGCATC..............................................................................................................................................................................................18118.0018141000000003000000
............................................................................................................TGCATTGTAGTCGCATTGTA...........................................................................................................................................................................................20118.0018411110001000000000
...........................................................................................................GTGCATTGTAGTCGCATTA.............................................................................................................................................................................................19118.001821010001436000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCAT.........................................................................................................................................................................................23117.001711000021900003000
.........................................................................................................................................................................GGCAATACAACTTCAGTGCAAGC...........................................................................................................................23115.001540032300001200000
............................................................................................................TGCATTGTAGTCGCATTGTCAA.........................................................................................................................................................................................22115.0015000130000110000000
...........................................................................................................GTGCATTGTAGTCGCATTAA............................................................................................................................................................................................20115.001500000010131009000
.............................................................................................................GCATTGTAGTCGCATTGTCT..........................................................................................................................................................................................20113.001382011000001000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCTGAA.......................................................................................................................................................................................25113.001320000022210004000
...........................................................................................................GTGCATTGTAGTCGCATTGTGAA.........................................................................................................................................................................................23112.001200010025220000000
..............................................................................................................CATTGTAGTCGCATTGTCA..........................................................................................................................................................................................19111.001121110010014000000
...........................................................................................................GTGCATTGTAGTCGCATTC.............................................................................................................................................................................................19111.001110030000002014000
...............................................................................................................ATTGTAGTCGCATTGTCC..........................................................................................................................................................................................18111.001181100000001000000
...........................................................................................................GTGCATTGTAGTCGCATTGTTA..........................................................................................................................................................................................22111.001120000010130013000
...........................................................................................................GTGCATTGTAGTCGCATTGTCAC.........................................................................................................................................................................................23110.001000100000720000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCTGAAA-------------------...................................................................................................................................................................26110.001000000022330000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCTGTAA-------------------A..................................................................................................................................................................27110.001000010013320000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCTGTAA-------------------...................................................................................................................................................................26110.001000000032410000000
.............................................................................................................GCATTGTAGTCGCATTGTCA..........................................................................................................................................................................................20110.001000020010115000000
..........................................................................................................................................................................GCAATACAACTTCAGTGCAA.............................................................................................................................2018.00800003500000000000
.........................................................................................................................................................................GGCAATACAACTTCAGTG................................................................................................................................1818.00800002600000000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCTGTA.......................................................................................................................................................................................2517.00700100020121000000
..............................................................................................................CATTGTAGTCGCATTGT............................................................................................................................................................................................1717.00700000000007000000
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGCTCT........................................................................................................................2417.00700002500000000000
.............................................................................................................GCATTGTAGTCGCATTGTCAA.........................................................................................................................................................................................2117.00700000001501000000
............................................................................................................................................................................AATACAACTTCAGTGCAAGCTC.........................................................................................................................2217.00700002200003000000
...........................................................................................................GTGCATTGTAGTCGCATTGGA...........................................................................................................................................................................................2117.00741020000000000000
...............................................................................................................ATTGTAGTCGCATTGTCTG.........................................................................................................................................................................................1917.00711000000005000000
droSec2
AAGAATGTGTGCACC-CC------GAACAATCAGTCAT-----------TGGCGACTGAGTGCCAC---CAGACTCTT--------CCT-CCGGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCC-------------------CA--ATT--GC--TTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACACA-CAACGCCG---AATGTC------TCTGGC--------------------AAAAGTCGACAAGTTTT-----------------------------AGAAGCGCACSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
...........................................................................................................GTGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................21184511.0084511545367643265519677
...........................................................................................................GTGCATTGTAGTCGCATTGT............................................................................................................................................................................................20120268.0020268960036682946706
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGCT..........................................................................................................................2217084.007084267517932512365
............................................................................................................TGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................2014363.0043634353019
...........................................................................................................GTGCATTGTAGTCGCATTGTCT..........................................................................................................................................................................................2213863.0038632403363171080
...........................................................................................................GTGCATTGTAGTCGCATTG.............................................................................................................................................................................................1913257.00325724586721711
...........................................................................................................GTGCATTGTAGTCGCATTGTCA..........................................................................................................................................................................................2212192.002192170110943339
...........................................................................................................GTGCATTGTAGTCGCATTGTCTG.........................................................................................................................................................................................2311192.00119270812442318
...........................................................................................................GTGCATTGTAGTCGCATTGTT...........................................................................................................................................................................................211755.007552741318342
............................................................................................................TGCATTGTAGTCGCATTGT............................................................................................................................................................................................191701.00701695006
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGC...........................................................................................................................211447.00447330221085
...........................................................................................................GTGCATTGTAGTCGCATTGTA...........................................................................................................................................................................................211373.0037324826495
................................................................................................................................TGTCC-------------------CA--ATT--GC--TTCAGG................................................................................................................................................181304.003043026932
.............................................................................................................GCATTGTAGTCGCATTGTC...........................................................................................................................................................................................191280.00280262774
...........................................................................................................GTGCATTGTAGTCGCATT..............................................................................................................................................................................................181237.002371601571
............................................................................................................................................................................AATACAACTTCAGTGCAAGCT..........................................................................................................................211228.0022819913214
............................................................................................................TGCATTGTAGTCGCATTG.............................................................................................................................................................................................181211.00211211000
............................................................................................................TGCATTGTAGTCGCATTGTCT..........................................................................................................................................................................................211210.00210209001
...........................................................................................................GTGCATTGTAGTCGCATTGTG...........................................................................................................................................................................................211210.00210207102
...........................................................................................................................................................................CAATACAACTTCAGTGCAAG............................................................................................................................201208.0020857244123
............................................................................................................TGCATTGTAGTCGCATTGTCA..........................................................................................................................................................................................211138.00138137001
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGCTT.........................................................................................................................231104.001044434125
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGCTA.........................................................................................................................23196.00964521129
...........................................................................................................GTGCATTGTAGTCGCATTGTCAA.........................................................................................................................................................................................23192.00925712212
...........................................................................................................GTGCATTGTAGTCGCATTGTCC..........................................................................................................................................................................................22177.0077560219
...........................................................................................................GTGCATTGTAGTCGCATTGTCG..........................................................................................................................................................................................22175.0075348330
............................................................................................................TGCATTGTAGTCGCATTGTCTG.........................................................................................................................................................................................22174.007474000
...........................................................................................................GTGCATTGTAGTCGCATTGA............................................................................................................................................................................................20161.0061443014
...........................................................................................................GTGCATTGTAGTCGCATTGTCTT.........................................................................................................................................................................................23156.005641609
...........................................................................................................GTGCATTGTAGTCGCATTC.............................................................................................................................................................................................19154.005453100
...........................................................................................................GTGCATTGTAGTCGCATTGTCTGT........................................................................................................................................................................................24149.00491620013
...........................................................................................................GTGCATTGTAGTCGCATTGG............................................................................................................................................................................................20146.004643102
...........................................................................................................GTGCATTGTAGTCGCATTGTCTGA........................................................................................................................................................................................24143.004342100
..............................................................................................................CATTGTAGTCGCATTGTC...........................................................................................................................................................................................18142.004233216
.............................................................................................................GCATTGTAGTCGCATTGT............................................................................................................................................................................................18140.004040000
...........................................................................................................GTGCATTGTAGTCGCATTGC............................................................................................................................................................................................20139.0039137118
............................................................................................................................................................................AATACAACTTCAGTGCAAGC...........................................................................................................................20132.003232000
...........................................................................................................GTGCATTGTAGTCGCATTT.............................................................................................................................................................................................19131.003130100
..........................................................................................................GGTGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................22125.002525000
...........................................................................................................GTGCATTGTAGTCGCATTGTAA..........................................................................................................................................................................................22225.0050241259
...........................................................................................................GTGCATTGTAGTCGCATTTC............................................................................................................................................................................................20124.002423001
............................................................................................................TGCATTGTAGTCGCATTGTA...........................................................................................................................................................................................20118.001818000
.............................................................................................................................................................................ATACAACTTCAGTGCAAGCT..........................................................................................................................20118.001814400
..........................................................................................................................................................................GCAATACAACTTCAGTGCAAGC...........................................................................................................................22114.001414000
.............................................................................................................GCATTGTAGTCGCATTGTCT..........................................................................................................................................................................................20114.001413100
............................................................................................................TGCATTGTAGTCGCATTGTT...........................................................................................................................................................................................20212.502525000
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGCA..........................................................................................................................22111.00119101
...........................................................................................................GTGCATTGTAGTCGCATTA.............................................................................................................................................................................................19111.00115105
.........................................................................................................................................................................GGCAATACAACTTCAGTGCAAGC...........................................................................................................................23111.001111000
.............................................................................................................GCATTGTAGTCGCATTGTCA..........................................................................................................................................................................................20111.001111000
...........................................................................................................GTGCATTGTAGTCGCATTGTGA..........................................................................................................................................................................................22110.00109001
...........................................................................................................................................................................CAATACAACTTCAGTGCAA.............................................................................................................................1919.0091026
..........................................................................................................................................................................GCAATACAACTTCAGTGCAAG............................................................................................................................2118.0087100
............................................................................................................................................................................AATACAACTTCAGTGCAAGCTT.........................................................................................................................2218.0088000
...........................................................................................................GTGCATTGTAGTCGCATTGTAAA.........................................................................................................................................................................................2337.33228572
...........................................................................................................GTGCATTGTAGTCGCATA..............................................................................................................................................................................................1817.0070007
............................................................................................................TGCATTGTAGTCGCATTGTCTGA........................................................................................................................................................................................2317.0076001
...........................................................................................................GTGCATTGTAGTCGCATTGTCAAA........................................................................................................................................................................................2417.0075011
...........................................................................................................GTGCATTGTAGTCGCATTGTCTA.........................................................................................................................................................................................2317.0076001
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGCTG.........................................................................................................................2316.0066000
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGT...........................................................................................................................2116.0061104
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGCTAA........................................................................................................................2416.0060204
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGCTC.........................................................................................................................2315.0053002
...........................................................................................................GTGCATTGTAGTCGCATC..............................................................................................................................................................................................1815.0055000
............................................................................................................TGCATTGTAGTCGCATTC.............................................................................................................................................................................................1825.001010000
...........................................................................................................GTGCATTGTAGTCGCATTGTCAT.........................................................................................................................................................................................2315.0053101
...........................................................................................................GTGCATTGTAGTCGCATTGAA...........................................................................................................................................................................................2115.0052102
.............................................................................................................GCATTGTAGTCGCATTGTCTG.........................................................................................................................................................................................2115.0055000
............................................................................................................TGCATTGTAGTCGCATTGTCAA.........................................................................................................................................................................................2214.0044000
............................................................................................................TGCATTGTAGTCGCATTGTCTT.........................................................................................................................................................................................2214.0044000
.........................................................................................................AGGTGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................2314.0043001
...........................................................................................................GTGCATTGTAGTCGCATTGAT...........................................................................................................................................................................................2114.0041102
droYak3
AAGAATGTGTGCACC-CC------GATCAATCGGTCAA-----------TTGCGACTGAGTGCCAC---CAGACTCTT--------ACT-CCAGAGATGTCACGAAGGTGCATTGTAGTCGCATTGTCTGTCC-------------------CA--ATT--GC--TTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACAAA-CAACGCCG---AGTGTC------TCTGGC--------------------AAAAGTCGACCAGTTTT-----------------------------AGAAGCA--CSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
...........................................................................................................GTGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................211157070.001570701041903311162666594612676612902536385
...........................................................................................................GTGCATTGTAGTCGCATTGT............................................................................................................................................................................................2019614.00961465232831371391781264294680260
...........................................................................................................GTGCATTGTAGTCGCATTGTCT..........................................................................................................................................................................................2213554.00355414511318194271802771050020
............................................................................................................TGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................2012714.002714712631603300000
...........................................................................................................GTGCATTGTAGTCGCATTGTCA..........................................................................................................................................................................................2212560.0025603531482945333739210010
...........................................................................................................GTGCATTGTAGTCGCATTG.............................................................................................................................................................................................1912135.0021353301383726167197220030
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGCT..........................................................................................................................2211968.001968101579200193664600000
...........................................................................................................GTGCATTGTAGTCGCATTGTA...........................................................................................................................................................................................211764.00764514126663111950002
...........................................................................................................GTGCATTGTAGTCGCATTGTCTG.........................................................................................................................................................................................231731.00731974945193558220010
...........................................................................................................GTGCATTGTAGTCGCATTGTT...........................................................................................................................................................................................211433.004331551161124486190000
...........................................................................................................GTGCATTGTAGTCGCATTGTCC..........................................................................................................................................................................................221415.004152633591551600000
............................................................................................................TGCATTGTAGTCGCATTGT............................................................................................................................................................................................191239.002390238100000000
.............................................................................................................GCATTGTAGTCGCATTGTC...........................................................................................................................................................................................191187.0018722156201330000
...........................................................................................................GTGCATTGTAGTCGCATTGTCAA.........................................................................................................................................................................................231143.001432867412410000
............................................................................................................TGCATTGTAGTCGCATTG.............................................................................................................................................................................................181139.001391138000000000
............................................................................................................................................................................AATACAACTTCAGTGCAAGCT..........................................................................................................................211132.001320129201000000
...........................................................................................................GTGCATTGTAGTCGCATT..............................................................................................................................................................................................181123.00123185010153400050
............................................................................................................TGCATTGTAGTCGCATTGTCT..........................................................................................................................................................................................211121.001211120000000000
...........................................................................................................GTGCATTGTAGTCGCATTGC............................................................................................................................................................................................201115.0011550136031780000
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGC...........................................................................................................................211110.001102831914100000
............................................................................................................TGCATTGTAGTCGCATTGTCA..........................................................................................................................................................................................21196.0096096000000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCG..........................................................................................................................................................................................22178.00784517014740000
...........................................................................................................GTGCATTGTAGTCGCATTGG............................................................................................................................................................................................20155.0055403013710000
............................................................................................................TGCATTGTAGTCGCATTGTCTG.........................................................................................................................................................................................22155.0055154000000000
................................................................................................................................TGTCC-------------------CA--ATT--GC--TTCAGG................................................................................................................................................18153.0053369266300000
..............................................................................................................CATTGTAGTCGCATTGTC...........................................................................................................................................................................................18152.00523316200010000
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGCC..........................................................................................................................22152.0052015100000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCTT.........................................................................................................................................................................................23147.0047531003620000
..........................................................................................................GGTGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................22132.0032823000100000
...........................................................................................................................................................................CAATACAACTTCAGTGCAAG............................................................................................................................20124.0024113003430000
...........................................................................................................GTGCATTGTAGTCGCATTGA............................................................................................................................................................................................20122.0022211211320000
...........................................................................................................GTGCATTGTAGTCGCATTGTG...........................................................................................................................................................................................21121.002173304400000
...........................................................................................................GTGCATTGTAGTCGCATTGTCTGT........................................................................................................................................................................................24120.0020013001150000
...........................................................................................................GTGCATTGTAGTCGCATTGTAA..........................................................................................................................................................................................22219.50391126125300000
...........................................................................................................GTGCATTGTAGTCGCATA..............................................................................................................................................................................................18119.0019110071000000
.............................................................................................................................................................................ATACAACTTCAGTGCAAGCT..........................................................................................................................20116.0016013100020000
.............................................................................................................GCATTGTAGTCGCATTGT............................................................................................................................................................................................18116.0016015000100000
...........................................................................................................GTGCATTGTAGTCGCATTT.............................................................................................................................................................................................19115.001502006610000
............................................................................................................TGCATTGTAGTCGCATTGTT...........................................................................................................................................................................................20115.0015015000000000
.........................................................................................................................................................................GGCAATACAACTTCAGTGCAAGC...........................................................................................................................23115.0015014100000000
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGCTT.........................................................................................................................23113.001307401010000
............................................................................................................TGCATTGTAGTCGCATTGTA...........................................................................................................................................................................................20111.0011011000000000
..........................................................................................................................................................................GCAATACAACTTCAGTGCAAGC...........................................................................................................................22111.001107300100000
.............................................................................................................GCATTGTAGTCGCATTGTCA..........................................................................................................................................................................................20110.001009000100000
...........................................................................................................GTGCATTGTAGTCGCATG..............................................................................................................................................................................................18110.001080000200000
..............................................................................................................CATTGTAGTCGCATTGTCT..........................................................................................................................................................................................1919.00990000000000
...........................................................................................................GTGCATTGTAGTCGC.................................................................................................................................................................................................1519.00900000001080
...........................................................................................................GTGCATTGTAGTCGCATTGTCAAA........................................................................................................................................................................................2419.00906210000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCTA.........................................................................................................................................................................................2318.00834010000000
..............................................................................................................................................................................TACAACTTCAGTGCAAGCT..........................................................................................................................1918.00807100000000
...............................................................................................................ATTGTAGTCGCATTGTCT..........................................................................................................................................................................................1818.00871000000000
............................................................................................................................................................................AATACAACTTCAGTGCAAGC...........................................................................................................................2016.00606000000000
............................................................................................................TGCATTGTAGTCGCATTGTCC..........................................................................................................................................................................................2116.00606000000000
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGCTA.........................................................................................................................2316.00603110100000
.............................................................................................................GCATTGTAGTCGCATTGTCT..........................................................................................................................................................................................2016.00606000000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCTGA........................................................................................................................................................................................2416.00605100000000
...........................................................................................................GTGCATTGTAGTCGCATTGTAAA.........................................................................................................................................................................................2326.001208111100000
...........................................................................................................GTGCATTGTAGTCGCATTGTTA..........................................................................................................................................................................................2216.00602120100000
............................................................................................................TGCATTGTAGTCGCATTGTCAA.........................................................................................................................................................................................2216.00606000000000
...............................................................................................................................................................................ACAACTTCAGTGCAAGCT..........................................................................................................................1816.00606000000000
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGCG..........................................................................................................................2216.00606000000000
..........................................................................................................................................................................GCAATACAACTTCAGTGCAAGCT..........................................................................................................................2315.00505000000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCTGTCC-------------------...................................................................................................................................................................2615.00504100000000
...........................................................................................................GTGCATTGTAGTCGCATTC.............................................................................................................................................................................................1914.00404000000000
.........................................................................................................AGGTGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................2314.00412000100000
.............................................................................................................GCATTGTAGTCGCATTGTCTG.........................................................................................................................................................................................2114.00404000000000
...........................................................................................................GTGCATTGTAGTCGCA................................................................................................................................................................................................1614.00400000000040
...........................................................................................................................................................................CAATACAACTTCAGTGCAA.............................................................................................................................1914.00404000000000
droEre2
AAGAATGTGTGCACC-CC------GATCAATCAGTCAA-----------TTGCGACTGAGTGCCAC---CAGACTCTC--------ACT-CCAGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCC-------------------CA--ATT--GC--TTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACAAA-CAACGCCG---AGTGTT------CCTGGC--------------------AAAAGTCGACAAGCTTT-----------------------------ATAAGCACACSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
...........................................................................................................GTGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................211142950.0014295088427107763944022056525985100
...........................................................................................................GTGCATTGTAGTCGCATTGT............................................................................................................................................................................................20126033.0026033123357147946646057060
...........................................................................................................GTGCATTGTAGTCGCATTGTCT..........................................................................................................................................................................................2217973.00797351578249585017040
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGCT..........................................................................................................................2217968.00796854004121214786149916
............................................................................................................TGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................2017192.00719271570308222
...........................................................................................................GTGCATTGTAGTCGCATTG.............................................................................................................................................................................................1916537.0065375027014074369270
...........................................................................................................GTGCATTGTAGTCGCATTGTCA..........................................................................................................................................................................................2214538.0045383660242661835850
...........................................................................................................GTGCATTGTAGTCGCATTGTCTG.........................................................................................................................................................................................2312450.00245016181561726346035
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGC...........................................................................................................................211933.009337108220451480
............................................................................................................TGCATTGTAGTCGCATTGT............................................................................................................................................................................................191890.00890888000110
...........................................................................................................GTGCATTGTAGTCGCATTGTT...........................................................................................................................................................................................211832.0083241905331791780
...........................................................................................................GTGCATTGTAGTCGCATTGTA...........................................................................................................................................................................................211525.005253035161301700
............................................................................................................TGCATTGTAGTCGCATTG.............................................................................................................................................................................................181444.00444441000030
............................................................................................................TGCATTGTAGTCGCATTGTCT..........................................................................................................................................................................................211440.00440439000010
.............................................................................................................GCATTGTAGTCGCATTGTC...........................................................................................................................................................................................191423.0042338412115200
............................................................................................................................................................................AATACAACTTCAGTGCAAGCT..........................................................................................................................211414.004143920606100
...........................................................................................................GTGCATTGTAGTCGCATTGTG...........................................................................................................................................................................................211407.00407391240370
...........................................................................................................GTGCATTGTAGTCGCATT..............................................................................................................................................................................................181338.00338206180131100
...........................................................................................................................................................................CAATACAACTTCAGTGCAAG............................................................................................................................201325.00325740110471930
............................................................................................................TGCATTGTAGTCGCATTGTCA..........................................................................................................................................................................................211286.00286286000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCAA.........................................................................................................................................................................................231228.002281910278200
................................................................................................................................TGTCC-------------------CA--ATT--GC--TTCAGG................................................................................................................................................181222.002222932851750
...........................................................................................................GTGCATTGTAGTCGCATTGTCTT.........................................................................................................................................................................................231192.0019214004115320
...........................................................................................................GTGCATTGTAGTCGCATTGTCC..........................................................................................................................................................................................221148.0014810155010270
...........................................................................................................GTGCATTGTAGTCGCATTGTCG..........................................................................................................................................................................................221135.0013557012231330
............................................................................................................TGCATTGTAGTCGCATTGTCTG.........................................................................................................................................................................................221133.00133133000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCTGT........................................................................................................................................................................................24184.00842802034173
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGCTT.........................................................................................................................23183.0083600008150
...........................................................................................................GTGCATTGTAGTCGCATTGA............................................................................................................................................................................................20166.006648030690
...........................................................................................................GTGCATTGTAGTCGCATTT.............................................................................................................................................................................................19158.005842030580
...........................................................................................................GTGCATTGTAGTCGCATTC.............................................................................................................................................................................................19254.00108105000120
.............................................................................................................GCATTGTAGTCGCATTGT............................................................................................................................................................................................18153.005350000210
...........................................................................................................GTGCATTGTAGTCGCATTTC............................................................................................................................................................................................20153.005350001020
............................................................................................................................................................................AATACAACTTCAGTGCAAGC...........................................................................................................................20152.005251000100
..............................................................................................................CATTGTAGTCGCATTGTC...........................................................................................................................................................................................18151.0051320006130
...........................................................................................................GTGCATTGTAGTCGCATTGG............................................................................................................................................................................................20148.004840140210
...........................................................................................................GTGCATTGTAGTCGCATTGC............................................................................................................................................................................................20142.0042945010140
..........................................................................................................GGTGCATTGTAGTCGCATTGTC...........................................................................................................................................................................................22138.003836000020
...........................................................................................................GTGCATTGTAGTCGCATTGTAA..........................................................................................................................................................................................22237.00743702314180
............................................................................................................TGCATTGTAGTCGCATTGTT...........................................................................................................................................................................................20136.003636000000
.............................................................................................................................................................................ATACAACTTCAGTGCAAGCT..........................................................................................................................20129.002917010650
................................................................................................................TTGTAGTCGCATTGTCTG.........................................................................................................................................................................................18129.002900000029
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGCTA.........................................................................................................................23128.0028151000210
.........................................................................................................................................................................GGCAATACAACTTCAGTGCAAGC...........................................................................................................................23126.002622200110
...........................................................................................................GTGCATTGTAGTCGCATTGTCAAA........................................................................................................................................................................................24126.002624000200
............................................................................................................TGCATTGTAGTCGCATTGTA...........................................................................................................................................................................................20125.002525000000
...........................................................................................................................................................................CAATACAACTTCAGTGCAA.............................................................................................................................19124.002413000380
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGCC..........................................................................................................................22122.002281100210
............................................................................................................TGCATTGTAGTCGCATTGTCAA.........................................................................................................................................................................................22119.001919000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCTGA........................................................................................................................................................................................24118.001815000210
.............................................................................................................GCATTGTAGTCGCATTGTCT..........................................................................................................................................................................................20118.001817000010
...........................................................................................................................................................................CAATACAACTTCAGTGCA..............................................................................................................................18117.001720000150
...........................................................................................................GTGCATTGTAGTCGCATTGTCTA.........................................................................................................................................................................................23116.001610000150
............................................................................................................TGCATTGTAGTCGCATTGTCTT.........................................................................................................................................................................................22114.001414000000
..........................................................................................................................................................................GCAATACAACTTCAGTGCAAGC...........................................................................................................................22113.001311100010
...........................................................................................................GTGCATTGTAGTCGCATA..............................................................................................................................................................................................18113.001310100110
...........................................................................................................GTGCATTGTAGTCGCATTGTGA..........................................................................................................................................................................................22112.001212000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCAT.........................................................................................................................................................................................23112.00129000120
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGCA..........................................................................................................................22112.001211010000
.............................................................................................................GCATTGTAGTCGCATTGTCA..........................................................................................................................................................................................20110.001010000000
.............................................................................................................GCATTGTAGTCGCATTGTCTG.........................................................................................................................................................................................2119.0099000000
............................................................................................................TGCATTGTAGTCGCATTGTCC..........................................................................................................................................................................................2119.0099000000
...........................................................................................................GTGCATTGTAGTCGCATTGTCTC.........................................................................................................................................................................................2319.0094000050
............................................................................................................TGCATTGTAGTCGCATTGTCG..........................................................................................................................................................................................2119.0099000000
............................................................................................................TGCATTGTAGTCGCATTGTCTGT........................................................................................................................................................................................2318.0088000000
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGCG..........................................................................................................................2218.0085000030
..........................................................................................................................................................................GCAATACAACTTCAGTGCAAGCT..........................................................................................................................2317.0077000000
...........................................................................................................GTGCATTGTAGTCGCATC..............................................................................................................................................................................................1817.0076000010
...........................................................................................................................................................................CAATACAACTTCAGTGCAAGT...........................................................................................................................2117.0070000250
...........................................................................................................GTGCATTGTAGTCGCATTGTCTGTCC-------------------C..................................................................................................................................................................2717.0075000200

Generated: 10/20/2015 at 07:46 PM