ID:

dpe-mir-31b

 Coordinate:

scaffold_13:404334-404410 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-28.0 -27.5

Flybase annnotation

pre_miRNA [Dper\mir-31b-RM]; miRNA [Dper\miR-31b-RA]

No Repeatable elements found

Sense Strand Reads

TGTGTGTGTGTGTGTGTGCGTGCGTGTGTGTGTGTCCTGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAGCAAAAAGAAGATGATTTGAAATGCGGCTATGCCTCATCTAGTCAATTGCATTCATTTGATTCTATCAACGATGAACCAATCAAACGATCAACCGATGA

**************************************..(((((((((...(((((.(((((..((.(((((((....((((..........)))).....))))))).)).))))).)))))...)))).)))))...************************************* 		Read size # Mismatch Hit Count Total Norm Total M042

female body

 V111

male body		 M021

embryo

 V057

head

 V050

head

 V042

embryo
.....................................................TGGCAAGATGTCGGAATAGCT....................................................................................................... 21 0 1 1046.00 1046 451 356 195 22 17 5
.....................................................TGGCAAGATGTCGGAATAGCTG...................................................................................................... 22 0 1 737.00 737 497 169 4 13 27 27
.....................................................TGGCAAGATGTCGGAATAGCTGA..................................................................................................... 23 0 1 717.00 717 151 319 148 21 20 58
.....................................................TGGCAAGATGTCGGAATAGC........................................................................................................ 20 0 1 211.00 211 40 65 100 1 4 1
.....................................................TGGCAAGATGTCGGAATAGCTGT..................................................................................................... 23 1 1 55.00 55 33 16 0 3 1 2
......................................................GGCAAGATGTCGGAATAGCT....................................................................................................... 20 0 1 55.00 55 54 1 0 0 0 0
......................................................GGCAAGATGTCGGAATAGCTG...................................................................................................... 21 0 1 54.00 54 53 1 0 0 0 0
.....................................................TGGCAAGATGTCGGAATAGCTGG..................................................................................................... 23 1 1 35.00 35 0 0 34 0 0 1
.....................................................TGGCAAGATGTCGGAATAGCTT...................................................................................................... 22 1 1 34.00 34 15 15 0 2 2 0
......................................................GGCAAGATGTCGGAATAGCTGA..................................................................................................... 22 0 1 19.00 19 19 0 0 0 0 0
.....................................................TGGCAAGATGTCGGAATAG......................................................................................................... 19 0 1 18.00 18 9 5 3 0 1 0
.....................................................TGGCAAGATGTCGGAATAGCC....................................................................................................... 21 1 1 14.00 14 0 0 13 0 1 0
.....................................................TGGCAAGATGTCGGTATAGCTGA..................................................................................................... 23 1 2 12.00 24 1 6 3 8 3 3
.....................................................TGGCAAGATGTCGGAATACCTGA..................................................................................................... 23 1 1 11.00 11 1 0 7 2 1 0
.....................................................TGGCAAGATGTCGGAATAGCTGAT.................................................................................................... 24 1 1 11.00 11 1 4 6 0 0 0
.....................................................TGGCAAGATGTCGGAATAGCTGATT................................................................................................... 25 2 1 10.00 10 1 5 4 0 0 0
.....................................................TGGCAAGATGTCGGAATAGCTGAA.................................................................................................... 24 1 2 10.00 20 2 1 16 0 1 0
.....................................................TGGCAAGAGGTCGGAATAGCTG...................................................................................................... 22 1 2 10.00 20 20 0 0 0 0 0
.....................................................TGGCAAGAGGTCGGAATAGCTGA..................................................................................................... 23 1 1 9.00 9 6 0 0 3 0 0
.....................................................TGGCAAGATGTCGGTATAGCTG...................................................................................................... 22 1 2 8.00 16 2 3 1 4 6 0
.....................................................TGGCAAGAGGTCGGAATAGCT....................................................................................................... 21 1 2 7.00 14 14 0 0 0 0 0
.......................................................................................................GGCTATGCCTCATCTAGTCAAT.................................................... 22 0 1 7.00 7 7 0 0 0 0 0
.....................................................TGGCAAGAAGTCGGAATAGCTG...................................................................................................... 22 1 1 7.00 7 7 0 0 0 0 0
.....................................................TGGCAAGATGTCGGTATAGCT....................................................................................................... 21 1 2 6.50 13 2 5 0 4 2 0
.....................................................TGGCAAGAAGTCGGAATAGCT....................................................................................................... 21 1 1 5.00 5 4 1 0 0 0 0
.....................................................TGGCAAGATGTCGGAATAGCG....................................................................................................... 21 1 1 5.00 5 0 0 4 1 0 0
.......................................................GCAAGATGTCGGAATAGCTGA..................................................................................................... 21 0 1 5.00 5 3 0 2 0 0 0
.....................................................TGGCAAGATGTCGGAATAGCTGTT.................................................................................................... 24 2 1 5.00 5 4 1 0 0 0 0
......................................................TGCAAGATGTCGGAATAGCTGA..................................................................................................... 22 1 1 5.00 5 0 2 3 0 0 0
.........................................................AAGATGTCGGAATAGCTGA..................................................................................................... 19 0 1 4.00 4 0 0 4 0 0 0
....................................................TTGGCAAGATGTCGGAATAGCT....................................................................................................... 22 0 1 4.00 4 3 1 0 0 0 0
.....................................................TGGCAAGATGTCGGAATATCTGA..................................................................................................... 23 1 1 4.00 4 0 0 4 0 0 0
.....................................................TGCCAAGATGTCGGAATAGCTGA..................................................................................................... 23 1 1 4.00 4 0 1 3 0 0 0
.....................................................TGGCAAGACGTCGGAATAGCTG...................................................................................................... 22 1 1 4.00 4 4 0 0 0 0 0
.......................................................GCAAGATGTCGGAATAGCTG...................................................................................................... 20 0 1 4.00 4 3 0 1 0 0 0
.....................................................TGGCAAGATGTCGGGATAGCTGA..................................................................................................... 23 1 2 3.50 7 0 2 1 1 1 2
.....................................................TGGCAAGATGTCGGAATAGCTGAC.................................................................................................... 24 1 1 3.00 3 0 0 3 0 0 0
.....................................................TGGCAAGATGTCGGAATAGCTGAGA................................................................................................... 25 0 1 3.00 3 0 0 3 0 0 0
.....................................................TGGCAAGATGACGGAATAGCTGA..................................................................................................... 23 1 1 3.00 3 0 0 0 2 1 0
.....................................................TGGCAAGATGTCGGAACAGCT....................................................................................................... 21 1 1 3.00 3 0 2 1 0 0 0
.....................................................TGGCAAGATGTCAGAATAGC........................................................................................................ 20 1 1 3.00 3 0 1 2 0 0 0
...................................................TTTGGCAAGATGTCGGAATAGCT....................................................................................................... 23 0 1 3.00 3 0 3 0 0 0 0
.....................................................TGGCAAGATGTCGGAATAGCTTT..................................................................................................... 23 2 1 3.00 3 3 0 0 0 0 0
......................................................GGCAAGATGTCGGAATAGC........................................................................................................ 19 0 1 3.00 3 3 0 0 0 0 0
.......................................................GCAAGATGTCGGAATAGCT....................................................................................................... 19 0 1 3.00 3 2 0 0 0 1 0
....................................................CTGGCAAGATGTCGGAATAGCT....................................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0
....................................................TTGGCAAGATGTCGGAATAGCTG...................................................................................................... 23 0 1 3.00 3 1 0 2 0 0 0
.....................................................TGGCAAGACGTCGGAATAGCT....................................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0
.....................................................TGGCAAGATGTCGGCATAGCTGAG.................................................................................................... 24 1 2 2.50 5 1 2 0 1 1 0
.....................................................TGGCAAGATGTCGAAATAGCT....................................................................................................... 21 1 1 2.00 2 0 0 1 1 0 0
.....................................................TGGCAAGATGTCGGAATAGCTGAGAGCA................................................................................................ 28 0 1 2.00 2 0 0 2 0 0 0
.....................................................TGGCAAGATGTCGGAATAGCTGAGAGC................................................................................................. 27 0 1 2.00 2 0 0 2 0 0 0
......................................................TGCAAGATGTCGGAATAGCT....................................................................................................... 20 1 1 2.00 2 0 0 2 0 0 0
.....................................................TGGCAAGATGTCGGAATAGAT....................................................................................................... 21 1 1 2.00 2 1 0 0 0 1 0
.....................................................TGGCAAGGTGTCGGAATAGC........................................................................................................ 20 1 1 2.00 2 0 0 0 1 1 0
.....................................................TGGCAAGATGTCGGAGTAGCTGA..................................................................................................... 23 1 1 2.00 2 1 1 0 0 0 0
.....................................................TGGCAAGATGTCGGAATGGCT....................................................................................................... 21 1 1 2.00 2 0 1 0 1 0 0
.....................................................TGGCAAGATGTCGGAATAGCTGC..................................................................................................... 23 1 1 2.00 2 0 0 1 0 1 0
.....................................................TTGCAAGATGTCGGAATAGCT....................................................................................................... 21 1 1 2.00 2 1 0 0 1 0 0
.....................................................TGTCAAGATGTCGGAATAGCT....................................................................................................... 21 1 1 2.00 2 0 1 1 0 0 0
.....................................................TCTCAAGATGTCGGAATAGCTGA..................................................................................................... 23 2 1 2.00 2 0 0 2 0 0 0
.....................................................TGGCAAGATGTCGGAATAACT....................................................................................................... 21 1 1 2.00 2 1 0 0 0 0 1
.....................................................TGGCAAGATGTCGGAATT.......................................................................................................... 18 1 1 2.00 2 1 0 0 1 0 0
.....................................................TGGCAAGATGCCGGAATAGCT....................................................................................................... 21 1 1 2.00 2 0 0 1 1 0 0
.....................................................TGGCAAGATGTCTGAATAGCTG...................................................................................................... 22 1 1 2.00 2 0 0 2 0 0 0
.....................................................TGGCAAGATGTCGGAATATCT....................................................................................................... 21 1 1 2.00 2 1 0 0 1 0 0
......................................................GGCAAGATGTCGGAATAGCTGT..................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0
.....................................................TGGCAAGATGTCGGAATAGCTGAGG................................................................................................... 25 1 1 2.00 2 0 0 2 0 0 0
.....................................................TGGCAAGAAGTCGGAATAGCTGA..................................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0
.....................................................TCGCAAGATGTCGGAATAGCTGA..................................................................................................... 23 1 1 2.00 2 0 0 2 0 0 0
.....................................................TGGCAAGATGTCGGAATAGCTC...................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0
.....................................................TGGCAAGATGCCGGAATAGCTGA..................................................................................................... 23 1 1 2.00 2 0 0 0 1 1 0
.....................................................TGGCAAGATGACGGAATAGCT....................................................................................................... 21 1 1 2.00 2 0 0 0 2 0 0
.....................................................AGGCAAGATGTCGGAATAGCTGA..................................................................................................... 23 1 1 2.00 2 0 1 0 1 0 0
.....................................................TGGCAAGATGCCGGAATAGCTG...................................................................................................... 22 1 1 2.00 2 0 0 0 2 0 0
......................................................GGCAAGATATCGGAATAGCT....................................................................................................... 20 1 1 2.00 2 2 0 0 0 0 0
.....................................................TGACAAGATGTCGGAATAGCG....................................................................................................... 21 2 1 2.00 2 0 0 0 2 0 0
.....................................................TGGCAAGATGTCGCAATAGCTG...................................................................................................... 22 1 1 2.00 2 0 0 0 2 0 0
.....................................................TGGCAAGACGTCGGAATAGCTGA..................................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0
.....................................................TGGCAAGATGTCGGCATAGCTGATA................................................................................................... 25 2 2 1.50 3 0 2 0 0 0 1
.....................................................TGACAAGATCTCGGAATAGCTGC..................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATTTCGGAATAGGTGT..................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0
.....................................................TGCCAAGATGTCGGAATAGCTG...................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
.....................................................TGGCACGATGTCGGAATAGTTGA..................................................................................................... 23 2 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGGAATCGC........................................................................................................ 20 1 1 1.00 1 0 1 0 0 0 0
.....................................................TGACAAGATCTCGGAATAGCTG...................................................................................................... 22 2 1 1.00 1 0 0 0 0 1 0
.....................................................TGGCAAGATGTCGGAAGAGCTG...................................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCACGATGTCGGATTAGCT....................................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0
.........................................................................................................CTATGCCTCATCTAGTCAAT.................................................... 20 0 1 1.00 1 0 0 0 0 0 1
.....................................................TGGCAGGATGTCGGATTAGCTG...................................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0
.....................................................TGGGAAGATGTCACAATAGCTGA..................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGGCGGAATAGCT....................................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0
......................................................GTCAAGATGTCGGAATAGCTGT..................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAAGATGTCGCAATAGCTGA..................................................................................................... 23 1 1 1.00 1 0 0 0 0 0 1
.....................................................TCGCAAGATGCCGGAATAGCTGA..................................................................................................... 23 2 1 1.00 1 0 0 0 0 1 0
.....................................................TGGCAAGATTTCGGAATAGCTGA..................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
.....................................................TGGCAAGATGTCGCAATAGCGG...................................................................................................... 22 2 1 1.00 1 0 0 0 0 1 0
......................................................GGCAAGATGTCGGAATATCTG...................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCACGATGTCGGAATAGCA....................................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGGAATAGCA....................................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0
....................................................CTGGCAAGATGTCGTAATAGCTGA..................................................................................................... 24 2 1 1.00 1 0 0 0 0 0 1
.....................................................AGGCAAGATGGCGGAATAGCCGA..................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0
................................................CCATCTGGCAAGATGTCGGAATAGCT....................................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0
.....................................................TAGCAAGATGTCGGAATAGCGGA..................................................................................................... 23 2 1 1.00 1 0 0 0 1 0 0
.....................................................TGGTAAGATGTCGGAATAGCT....................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
.....................................................TTGCAAGATGTCGGAATAGC........................................................................................................ 20 1 1 1.00 1 0 0 1 0 0 0
.....................................................TGGCAAGATGTCGGAATCGCTGA..................................................................................................... 23 1 1 1.00 1 0 0 0 0 1 0
.....................................................TAGCAAGATGTCGGAATACCT....................................................................................................... 21 2 1 1.00 1 0 0 0 0 1 0
.....................................................TGTCAAGATGTCGGAATAGCTGG..................................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0
.....................................................TGGCAATATGTCGGAATAGCTGA..................................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0
.....................................................TGGCAAGATGTCGGAATCGCGG...................................................................................................... 22 2 1 1.00 1 0 0 0 0 1 0
......................................................GGCAAGATCTCGGAATAGCTT...................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAAGATGTCCGAATAGCT....................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0
.....................................................TGGCAAGATGTCGTAATAGCTG...................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
.....................................................CGGCAAGATGTCGCAATAGCTG...................................................................................................... 22 2 1 1.00 1 0 0 0 0 1 0
.....................................................TGGCAAGAGGTCGGAATAGCTGT..................................................................................................... 23 2 2 1.00 2 2 0 0 0 0 0
.....................................................TGGCAAGATGTCGGAAAAGCGTA..................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGGAATAGCTGAGAG.................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0
.....................................................TGGCAAGTTGCCGGAATAGCTG...................................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATCTCGGAATAGCT....................................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGGATTAGTTGA..................................................................................................... 23 2 1 1.00 1 0 0 0 0 0 1
.....................................................TGGCAGGGTGTCGGAGTAGCTGA..................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGACGTCGGAATAGC........................................................................................................ 20 1 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAAGATGTCGGAATAGCTGATA................................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0
.....................................................TGGCAAGATGTCGGAATAGCGG...................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAAGATGTCGGAATAGCTGAAA................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0
.....................................................TAGCAAGATGACGGAATAGCTGA..................................................................................................... 23 2 1 1.00 1 0 0 0 0 1 0
....................................................GTGGCAAGATGTCGGAATAGCTT...................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAAGATGTAGGAATAGCT....................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0
....................................................TTGGCAAGATGTCGGAATAGC........................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAAGATGTCGGGATAGCT....................................................................................................... 21 1 2 1.00 2 0 1 0 0 1 0
.....................................................TGGCAAGATGGCGGACTAGCTG...................................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGGAATGGCTG...................................................................................................... 22 1 1 1.00 1 0 0 0 0 1 0
.....................................................CGGCAAGATGTCGCAACAGCTGA..................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATCTCGGAATGGCTGA..................................................................................................... 23 2 1 1.00 1 0 0 0 1 0 0
.....................................................TGACAAGATGTCGGAATAGCT....................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.....................................................TGGAAAGATGTAGGAATAGCTGA..................................................................................................... 23 2 1 1.00 1 0 0 0 0 0 1
.....................................................TGGCAACATGTCGGAATAGCTCA..................................................................................................... 23 2 1 1.00 1 0 0 0 1 0 0
.....................................................TGACAAGATGGCGGAATAGCTGG..................................................................................................... 23 3 1 1.00 1 0 0 0 0 1 0
.....................................................TGGCAAGATGACGGAAGAGTTGA..................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGAATTAGCT....................................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAGGATGTCGGAACAGCT....................................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0
.....................................................GGGCAAGATGTCGGAATAGCTG...................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAAGATGACGGAATAGCCG...................................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0
.....................................................TGACAAGATGTCGGAATAGCTG...................................................................................................... 22 1 1 1.00 1 0 0 0 0 1 0
.....................................................TGGCATGATGTCGGAATAGCTGA..................................................................................................... 23 1 1 1.00 1 0 0 0 0 0 1
.......................................................GCAAGATGCCGGAATAGCTG...................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
......................................................GGCAAGATGTCGGAATAGCTT...................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.....................................................TGGTAAGATGTCGGAACAGCGG...................................................................................................... 22 3 1 1.00 1 0 0 0 0 1 0
.....................................................TGGCAAGATGTCGGAACAGCG....................................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0
.....................................................CGGCAAGATGTAGGAATAGCTGA..................................................................................................... 23 2 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGACGGAATAACTTA..................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0
......................................................GGCAAGATGTCGGAATAGCTTT..................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
........................................................CAAGATGTCGGAATAGCT....................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAAGAAGTCGGAATAGC........................................................................................................ 20 1 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAAGATGACGGCATAGCTGAGA................................................................................................... 25 2 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGGACTAGTTGA..................................................................................................... 23 2 1 1.00 1 0 0 0 0 1 0
.....................................................TGGCAAGCTGTAGGAACAGCTGA..................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0
.....................................................TGTCAAGATGTCGGAATAGCTGA..................................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0
.....................................................TGGCAAGATGACGGAATAGATGA..................................................................................................... 23 2 1 1.00 1 0 0 0 0 1 0
.....................................................TGGCAAGATGGCGGGATAGCTGA..................................................................................................... 23 2 2 1.00 2 0 0 0 2 0 0
.....................................................TGCCAAGATGTCGGAATAGCT....................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0
.....................................................TGGCAAGATCTCGGAATAACGG...................................................................................................... 22 3 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGGAATAGCTGAG.................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAAGATGTCAGAATAG......................................................................................................... 19 1 1 1.00 1 0 0 1 0 0 0
.....................................................TCACAAGATGTCGGAATAGCT....................................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAGGATTTCGGAATAGCT....................................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0
.....................................................TAGCAAGATGTCGGAATAGCTG...................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
.....................................................TGACAAGATGACGGAATAGTTG...................................................................................................... 22 3 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGGAGTAGCT....................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0
.....................................................TGGCCAGATGTCGGAATAGCT....................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
.....................................................TGGCAAGGTGTCGGAATAGCTGA..................................................................................................... 23 1 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGGTGTCGGAATGTCTGA..................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGGAATAACGG...................................................................................................... 22 2 1 1.00 1 0 0 0 0 1 0
.....................................................TGGCAAGCTGTCGGAATAGCT....................................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0
....................................................CTGGCAAGATGTCGGAATAGCTGA..................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
.....................................................TAGCAAGATGTCTGAATAGCTGA..................................................................................................... 23 2 1 1.00 1 0 0 0 0 1 0
....................................................ATGGCAAGATGTCGGAATAGCT....................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAAGATGTCGAAATAG......................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAAGATGTCGCAATAGC........................................................................................................ 20 1 1 1.00 1 0 0 1 0 0 0
.....................................................TGGCAAGATGTCGGAATA.......................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAAGATGTCGGAATATCTTT..................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCGAGATGTCGGAATAGCT....................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
.....................................................GGGCAAGATGTCGGAATAGCC....................................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGAAGTCGGAATAGCTC...................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
.....................................................GGGCAAGATGTCGGAATAGCTGA..................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
.....................................................TGACAAGATGTCGAAAGAGCT....................................................................................................... 21 3 1 1.00 1 0 0 0 0 1 0
.....................................................TGGCAAGATGGCGGAATAGCTG...................................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCAGAATAGCTGA..................................................................................................... 23 1 1 1.00 1 0 0 0 0 0 1
.....................................................TGGCAAGATGTTGGAATAGCCG...................................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATATCGGAATAGC........................................................................................................ 20 1 1 1.00 1 0 0 1 0 0 0
......................................................GGAAAGATGTCGGAATAGCT....................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAAGATGTCGGAAGAGC........................................................................................................ 20 1 1 1.00 1 0 0 0 0 1 0
....................................................ATGGCAAGATGTCGGAATAGCTGT..................................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
.....................................................TTGCAAGATGTCGGAATAGCTGC..................................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0
.....................................................CGGCAAGCTGTCGGAATATCTG...................................................................................................... 22 3 1 1.00 1 0 0 0 1 0 0
.....................................................TGGGAAGATGTCGGAATAGCTGA..................................................................................................... 23 1 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCTTAATAGCTGA..................................................................................................... 23 2 1 1.00 1 0 0 0 0 1 0
.....................................................TGGCAAGATGTCGGAATGGTT....................................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGCAATAG......................................................................................................... 19 1 1 1.00 1 0 0 0 0 1 0
.....................................................TGGCAAGATGTCGAAATAGCTGA..................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
.....................................................GGGCAAGATGTCGGAATAGCTGT..................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAGGATGTCGGAATAGC........................................................................................................ 20 1 1 1.00 1 0 0 1 0 0 0
.....................................................TGGCAAGATGTCGGGATAGCTG...................................................................................................... 22 1 2 1.00 2 1 1 0 0 0 0
.....................................................TAGCAAGATGTCGGAATAGCTGT..................................................................................................... 23 2 1 1.00 1 0 0 0 1 0 0
.......................................................................................................GGCTATGCCTCATCTAGTCAA..................................................... 21 0 1 1.00 1 1 0 0 0 0 0
.....................................................CGGCAAGATGTCGGAATAGCT....................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0
.....................................................TGGCAAGATGTCGGACTAGCT....................................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGCTGTCGGACTAGCTG...................................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATATCGGAATAGCTGAA.................................................................................................... 24 2 2 1.00 2 0 0 2 0 0 0
.....................................................TGGCAAGATGTCGAAATAGC........................................................................................................ 20 1 1 1.00 1 0 0 0 0 1 0
.....................................................TGGCATGATGTCGGAAGAGCTG...................................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAACATGTCGGAATAGCTG...................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAAGATGTCGGAATAGCTGACT................................................................................................... 25 2 1 1.00 1 0 1 0 0 0 0
.....................................................TGGCAAGATGTCGCAACAGCTCA..................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGGAAGAGCG....................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 1
.....................................................TGGGAAGATGTCGAAATAGCT....................................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0
.....................................................TGGGAAGATGTCGGAAGAGCTT...................................................................................................... 22 3 1 1.00 1 0 0 0 1 0 0
.....................................................TGGAAAGATGTCGGAATAGCTG...................................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0
.....................................................TTGCAAGATGTCGGAATAGCTG...................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.....................................................AGGCAAGATGTCGGAATAGC........................................................................................................ 20 1 1 1.00 1 1 0 0 0 0 0
.....................................................CGGCAATATGTCGGAATAGCTGA..................................................................................................... 23 2 1 1.00 1 0 0 0 1 0 0
.....................................................TAGCAAGATGTCGGAATAGCTGA..................................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0
.....................................................TGGCAAGATGTCGGGATAGC........................................................................................................ 20 1 2 1.00 2 0 0 0 0 2 0
.....................................................TGGCAAGATGACGGAATAGCAGC..................................................................................................... 23 3 1 1.00 1 0 0 0 0 0 1
.....................................................TGGCACGATGTCGGAATAGCTGC..................................................................................................... 23 2 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAATATGTCGGAATAGCTGG..................................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0
.....................................................TGGCAAGAAGTCGCAATAGCTTA..................................................................................................... 23 3 1 1.00 1 0 0 0 0 0 1
.............................................................................AGCAAAAAGAAGATGATTTGAAATGC.......................................................................... 26 0 1 1.00 1 0 0 1 0 0 0
.....................................................TGGCAGGATGGCGGAATAGCTG...................................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGGAATAGTTG...................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAAGATGTCGGAATCGCTGT..................................................................................................... 23 2 1 1.00 1 0 0 0 0 0 1
.....................................................TGGCTAGATGTCGGAATAGCGGA..................................................................................................... 23 2 1 1.00 1 0 0 0 0 1 0
.....................................................TGGCAAGAGCGCGGAATAGCTGA..................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0
.....................................................TGACAAGATGTCGGAAGAGCT....................................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATCTCGGAATAGCGG...................................................................................................... 22 2 1 1.00 1 0 0 0 0 1 0
.....................................................TGGCAAGGTCTCGGAATAACTG...................................................................................................... 22 3 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCACGATGTCAGACTAGCTGA..................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0
......................................................GGCAAGATGTCGGAATAG......................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAAGATGTCGGCATAGCTGAGA................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAAGGTGTCGGAATAGCT....................................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAGGATGTCGGAATAGCTG...................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAAGATGTCGGAATATATGA..................................................................................................... 23 2 1 1.00 1 0 0 0 0 0 1
.....................................................TTGCAAGATGTCGGAATAGCTGG..................................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0
.....................................................TGGCAAGATCTCGGAATAGCTGAT.................................................................................................... 24 2 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCAGATTAGCTG...................................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1
.....................................................TGGCAAGATGTCGGAATCGCT....................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0
.....................................................TGGCAGGAGGTCGGAATAGCGGA..................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGGCTGAATAGCTGA..................................................................................................... 23 2 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGGAATAGCGA...................................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0
.....................................................TGGCAAGATGTCGGAAGAGCTGA..................................................................................................... 23 1 1 1.00 1 0 0 0 0 1 0
......................................................GGCAAGATGTCGGAATAGCTGATT................................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAAGATGTCGGAATAGCTA...................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.....................................................TGACAAGATGTCGGAATAGCTGA..................................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0
.....................................................TGGCAAGATGTTGGTCTAGCTGA..................................................................................................... 23 3 2 0.50 1 0 0 0 0 1 0
.....................................................TGACAAGATGTCGGAATGGCG....................................................................................................... 21 3 2 0.50 1 0 0 0 0 1 0
.....................................................TGGAAAGATGTCGGGATAGCTGA..................................................................................................... 23 2 2 0.50 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGGTATAGCCGA..................................................................................................... 23 2 2 0.50 1 0 0 0 0 0 1
.....................................................TGGTAAGATGACGGTATAGCTGA..................................................................................................... 23 3 2 0.50 1 0 0 0 0 0 1
.....................................................TGGCAAGATGTCGGGATGGGT....................................................................................................... 21 3 2 0.50 1 0 0 0 1 0 0
.....................................................TGGCAAGATGCCGGGATAGCTT...................................................................................................... 22 3 2 0.50 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGGAATAGCTACC.................................................................................................... 24 3 2 0.50 1 0 1 0 0 0 0
.....................................................TGGCAAGATGTCGGCATAGCTGCTA................................................................................................... 25 3 2 0.50 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGGAATCTCTT...................................................................................................... 22 3 2 0.50 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGGTATTGCTGA..................................................................................................... 23 2 2 0.50 1 0 0 0 0 0 1
.....................................................TGGCAAGATGACGGGATAGCT....................................................................................................... 21 2 2 0.50 1 0 0 0 1 0 0
.....................................................TGGCAAGATGGCGGTATCGCTGA..................................................................................................... 23 3 2 0.50 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCTGGATAGCTGA..................................................................................................... 23 2 2 0.50 1 0 0 0 0 0 1
.....................................................TGGCAAGATGTCGGAATAGCTGTA.................................................................................................... 24 2 2 0.50 1 0 1 0 0 0 0
.....................................................CGGTATGATGTCGGAATAGCT....................................................................................................... 21 3 2 0.50 1 0 0 0 1 0 0
.....................................................TCACAAGATGTCGGGATAGCTGA..................................................................................................... 23 3 2 0.50 1 0 0 0 1 0 0
.....................................................TGGCAAGACGTCTGAATACCT....................................................................................................... 21 3 2 0.50 1 0 0 0 0 1 0
.....................................................TGGCAAGATGTCTGTATAGCTGT..................................................................................................... 23 3 2 0.50 1 0 0 0 0 1 0
.................................................GATGTGGCAAGATGTCGGCATAGCT....................................................................................................... 25 3 2 0.50 1 1 0 0 0 0 0
.....................................................TGGCAAGATGTCGGTATAGC........................................................................................................ 20 1 2 0.50 1 0 1 0 0 0 0
.....................................................TGGAAAGATGTCGGCATAGCTGCG.................................................................................................... 24 3 2 0.50 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGGCATAGCTCTG.................................................................................................... 24 3 2 0.50 1 0 0 0 0 1 0
.....................................................TGGCAAGATTTCGGAATATCTT...................................................................................................... 22 3 2 0.50 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGTCATAGCTGCG.................................................................................................... 24 3 2 0.50 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGGCATAGCTGATAA.................................................................................................. 26 3 2 0.50 1 0 1 0 0 0 0
.....................................................TGGCAAGATGTCGGCATAGCTGAGC................................................................................................... 25 2 2 0.50 1 1 0 0 0 0 0
...................................................TCTGGCAAGATGTCGGCATAGCTGA..................................................................................................... 25 2 2 0.50 1 0 1 0 0 0 0
.....................................................TGGCAAGATCTCGGAATT.......................................................................................................... 18 2 2 0.50 1 0 0 0 1 0 0
.....................................................TGGCAAGAGGTCGGAATAGCTC...................................................................................................... 22 2 2 0.50 1 1 0 0 0 0 0
...................................................ATTGGCAAGATGTCGGAATAGCTGA..................................................................................................... 25 1 2 0.50 1 1 0 0 0 0 0
.....................................................TGGCAAGATGGCGGGATAGCT....................................................................................................... 21 2 2 0.50 1 0 0 0 0 1 0
.....................................................TGGTAAGATGACGGAATAGCGG...................................................................................................... 22 3 2 0.50 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGGTATAGCTGT..................................................................................................... 23 2 2 0.50 1 0 0 0 1 0 0
.....................................................TGGCAAGATGACGGGATAGCTGA..................................................................................................... 23 2 2 0.50 1 0 0 0 0 0 1
.....................................................CGGCAAGATGTCGGAATGGCTT...................................................................................................... 22 3 2 0.50 1 0 0 0 0 1 0
.....................................................TGTCAAGATGTCGGTCTAGCTGA..................................................................................................... 23 3 2 0.50 1 0 0 0 0 0 1
.....................................................TGGCAAGATGACGGGATAGCTG...................................................................................................... 22 2 2 0.50 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGGGATAGCG....................................................................................................... 21 2 2 0.50 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGGTATAGCA....................................................................................................... 21 2 2 0.50 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGGAATAGCTGCA.................................................................................................... 24 2 2 0.50 1 0 0 1 0 0 0
.....................................................TGGCAAGATGGCGGGATAGCTG...................................................................................................... 22 2 2 0.50 1 0 0 0 1 0 0
.....................................................TGGCAAGAAGTCTGGATAGCTGA..................................................................................................... 23 3 2 0.50 1 0 0 0 1 0 0
.....................................................TGGCAAGAGGTCGGAATAGCTCT..................................................................................................... 23 3 2 0.50 1 0 0 0 1 0 0
.....................................................TGTCAAGATGTCGGTATAGCT....................................................................................................... 21 2 2 0.50 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGGGATGGCTGT..................................................................................................... 23 3 2 0.50 1 0 0 0 1 0 0
.....................................................TTGCAAGATGTCGGGATAGCTGA..................................................................................................... 23 2 2 0.50 1 0 1 0 0 0 0

Anti-sense strand reads

ACACACACACACACACACGCACGCACACACACACAGGACTGTTTATTACTTAAACCGTTCTACAGCCTTATCGACTCTCGTTTTTCTTCTACTAAACTTTACGCCGATACGGAGTAGATCAGTTAACGTAAGTAAACTAAGATAGTTGCTACTTGGTTAGTTTGCTAGTTGGCTACT

*************************************..(((((((((...(((((.(((((..((.(((((((....((((..........)))).....))))))).)).))))).)))))...)))).)))))...************************************** 		Read size # Mismatch Hit Count Total Norm Total V111

male body		 V042

embryo
..............................................................................................................................................GAGTTGCTACGTGGTTAGT................ 19 2 3 0.33 1 1 0
.........................................................................................................................................................TGGTTAGGTTGCTAGAAGGC.... 20 3 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droPer2 scaffold_13:404284-404460 + dpe-mir-31b Known_mirbase TGTGT--------------GTGTGTG------TGTGTGC-------GTG----------------------------CGTGTGTGT-------------------------------GTGT-CCT----------------GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CAAA----------------------------------------------------------------AA---GAAGATGATTTGAAAT--GCGGCTATGCCTCATCTAGTCAATTGCATTCATTTGATTCTATCAACGATG------------AACCAATCAAACGATCAAC--------CGATGA
dp5 XL_group1e:8162292-8162474 - dps-mir-31b Known_mirbase TGTGT--------------GTGTGTG------CGTGTGT-------GTG----------------------------CGTGTG---------------------------T------GTGT-CCT----------------GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CAAA----------------------------------------------------------------AA---GAAGATGATTTGAAAT--GCGGCTATGCCTCATCTAGTCAATTGCATTCATTTGATTCTATCAACGATG------------AACCGATCAAACGATGAACCGATCAAACGATGA
droWil2 scf2_1100000004963:794434-794646 + dwi-mir-31b Known_mirbase TATAT--------------ATACTTT------TTTTTTT-------GT-----GTGTG-----------------------TGTAAGGATC-----------ACG--AATG------TGAT-G-----A-----------AAACAACTAGTGGATTTGGCAAGATGTCGGAATAGCTGAAAGTCACACAAAATCATAAAATGTTTGCCGTTTTG-----------------------TTATTGT---TGTGAATTTTATTGATTT-CAAAAATTACGGCTATGCCTCATCTAGTCAATTGCATTAGTTTGATTAAGTCAACTGTG------------TGCCAA---------------------------
droVir3 scaffold_12963:11099373-11099533 - TGTGT--------------GTGTGTG------TGTGTGT-------GTG----------------------------TGTGTGTGTGTGTG-----------TTG--AATG-------GGA-GTGCAAC-----------TGACGAGTTATGAGATCAAGAAGATGAC---ATAAATAAGAG-AACTCAAGGCG---------------------------------------------------------------AAAG--------TGA--TTGACTAGGATATATCCTGCAAACTGCCTCGGATTGA----ACTAACAATA------------AATC-----------------------------
droMoj3 scaffold_6473:5711112-5711296 + dmo-mir-31b Known_mirbase TTTTC------------AA-------GTGTT-TCATA----------------GTGCT-------------------CGG------------------------T--AATG------TGGT-CCTCG----------------CAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAAA-TATCATAGAAT----CCAGAATTTATATTTTGTGTATT-TTATTGA-------------------------------GTACA--GCGGCTATGCCTCATCTAGTCAATTGCATTCATTTGACAGCAGCAACCAAG------------GACC-----------------------------
droGri2 scaffold_15203:6378280-6378420 - dgr-mir-31b Known_mirbase ----------------------------------------------------------------------------------------------------------------------------------------------ACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGACAG-CACAA--GATCACAA-AT----CAAGAAACTTTATTTTGTGTATTTTTATTGA-------------------------------GTACA--GCGGCTATGCCTCATCTAGTCAATTGCATTCATTTGACATCAACAA---CG------------AA-------------------------------
droAna3 scaffold_13047:712418-712599 - dan-mir-31b Known_mirbase TGTGT--------------GCAAG----------AAA----------------GTGCCCGTC---------------CC------------------------AG--GACGGGACA-GCAT-CCTCG-A-----------AGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGAGGATC--G----------AGCGAG------------------------TCATCGACCGAGACGA-----------ATTCCAAA--GCGGCTATGCCTCATCTAGTCAATTACATTACTTTGACACTTTCCACGAGG------------GA-------------------------------
droBip1 scf7180000396431:497996-498149 - AGTGT--------------GT---------------A----------------GTGCT--------------------------------------------TTGCTAGTGGGACA-TGGTCCTTC--G-----------AGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CGCAGAGGATC--G----------A---------------------------------------------------------TTCGAAA--GCGGCTATGCCTCATCTAGTCAATTACATTACTTTGACACTTTCAACGAGG------------GATC-----------------------------
droKik1 scf7180000302698:200980-201182 + AAGG--------------------------------------------------TGTCTGTGCG-----------GT-------GAACATAATATACAAAATATTAAATA----------T-CCCTGCTGGAAATATAAAACAAAACTAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGAGGATC--G----------AGCAAG-----------------------TTGATCGATCCCAAAAATGTGAAAAATTTTTGAGAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGGATTCAACAA--------------------------------------------------
droFic1 scf7180000453829:856126-856323 - TATAT--ATATTTTTTTAA-------GTGGCTTTAAA----------------GTGCA-----------------------------TT-------------TGCAAAGTT------AGCT-CCTTATT-----------AGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCGGATC--G----------AGAAAC------------------------TTATCGACCGAAAAAATGTGATTATTTTTTAAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTAATTTGACACTATCAACG------------------------------------------------
droEle1 scf7180000491006:2391276-2391459 - TG---------------------------CCC-TCAA----------------GTGTC--------------------------------------------TGCGATGTT------GGCT-CCTTATT-----------AGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCGGATC--G----------AGCCAG------------------------TTATCGACCGAAAAAATGTGAATATTTTTGAAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGACACTATCAACGCGG------------TACC-----------------------------
droRho1 scf7180000779841:401674-401867 - TG---------------------------CCC-CCAA----------------GTGTC--------------------------------------------TGCCAAGTA------AACT-CCTTGTT-----------AGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAAAG-CACAGCGGATC--G----------AGCCAC------------------------TTATCGACCGAAAATATGTGAATATTTTTTAAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTAATTTGACACTATCAACGTGAAAACAGTGACAAGA-------------------------------
droBia1 scf7180000301760:2615083-2615236 - AGT-------------------------GCCC-CCAA----------------GTGCT--------------------------------------------TGCAAAGTTACACACAGCT-CCTCGTT-----------AGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCG-------------------------------------------------------------------AATATTTTTCAAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGACACTATCAACG------------------------------------------------
droTak1 scf7180000415169:1035683-1035882 + --------------------------GTGCCC-CTTA----------------GTGTT-------------------CAG-------TT-------------TGCAAAGTT------AGCT-CCTCGTT-----------AGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCGGATC--G----------AGTCTT-----------------------TTTATCGACCGAAAAAATGTGAATATTTTTTAAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGACACCAGCAACGAGGATGAAATA--A-TAAA-----------------------------
droEug1 scf7180000408176:324215-324452 - TTTCTAAATATTTTTTTAA-------GTGCCT-TAAA----------------GTGTGTGTGTGTTTTTTTTTTGAT-------AAGCAT--------------------C------AACT-CC----T-----------AGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCGGTTC--G----------AGACTT-----------------------TTCCTCAACCGGAAAAATGTGAAAATTTTTTAAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTAATTTGACACTATCAACGTGGGAGGATTC--A----------AGAGTTTGA---------TTATTA
dm3 chrX:8887321-8887514 - dme-mir-31b Known_mirbase CCTTT--------TTTTAA-------GTGCCC-TT-T--------------GTGTGTA--------------------------------------------CCGAAAGTT------CGCT-CCACGTT-----------AGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCGGATC--G----------AACATT------------------------TTATCGTCCGAAAAAATGTGATTATTTT-TGAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGACTCTATCAGCGTTG------------GA-------------------------------
droSim2 x:8436325-8436507 - dsi-mir-31b Known_mirbase TG---------------------------CCC-TTTT--------------GAGTGTT--------------------------------------------TTGAAAGTT------CGCT-CCTCGTT-----------AGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCGGATC--G----------AGCCTC------------------------TTATCGTCCGAAAAAATGTGATTATTTT-TGAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGACGCTATCAACGTTG------------GA-------------------------------
droSec2 scaffold_34:250167-250343 - dse-mir-31b Known_mirbase TTTG--------------------------------A----------------GTGTT--------------------------------------------TTGAAAGTT------TGCT-CCTCGTT-----------AGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCGGATC--G----------AGCCTC------------------------TTATCGTCCGAAAAAATGTGATTATTTT-TGAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGACGCTATCAACGTTG------------GA-------------------------------
droYak3 X:12425636-12425838 + dya-mir-31b Known_mirbase TTTTT----------TTAA-------GTGCCC-CAAAGTCTGAAGTGTTTTGAA------------------------------------------------TGTCTCGTT------TTCT-CCTCGTT-----------AGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCGGATC--G----------AGCCTT------------------------TGATCGTCCGAAAAAATGTGAATATTTT-TTAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGACTCTATCAGCGTTG------------GA-------------------------------
droEre2 scaffold_4690:6225273-6225453 + der-mir-31b Known_mirbase TG---------------------------CCC-TTAA----------------GTGTT--------------------------------------------CCGCAAGTT------CGCT-CCTCGTT-----------AGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCGGATC--G----------AGCCTC------------------------TTATCGTCCGAAAAAATGTGAATATTTT-TGAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGACACTATCAACGTTG------------GA-------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
TGTGT--------------GTGTGTG------TGTGTGC-------GTG----------------------------CGTGTGTGT-------------------------------GTGT-CCT----------------GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CAAA----------------------------------------------------------------AA---GAAGATGATTTGAAAT--GCGGCTATGCCTCATCTAGTCAATTGCATTCATTTGATTCTATCAACGATG------------AACCAATCAAACGATCAAC--------CGATGASizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
............................................................................................................................................................TGGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................2111046.00104619545151722356
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTG................................................................................................................................................................................................221737.007374497272713169
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................231717.00717148151582021319
............................................................................................................................................................TGGCAAGATGTCGGAATAGC..................................................................................................................................................................................................201211.002111004014165
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGT...............................................................................................................................................................................................23155.005503321316
.............................................................................................................................................................GGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................20155.00550540001
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTG................................................................................................................................................................................................21154.00540530001
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGG...............................................................................................................................................................................................23135.00353401000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTT................................................................................................................................................................................................22134.003401502215
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................22119.00190190000
............................................................................................................................................................TGGCAAGATGTCGGAATAG...................................................................................................................................................................................................19118.0018390105
............................................................................................................................................................TGGCAAGATGTCGGAATAGCC.................................................................................................................................................................................................21114.00141300100
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAT..............................................................................................................................................................................................24111.0011610004
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGATT.............................................................................................................................................................................................25110.0010410005
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAA..............................................................................................................................................................................................24210.00201620101
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAAT........................................................................2217.007070000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCG.................................................................................................................................................................................................2115.005400010
..............................................................................................................................................................GCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................2115.005230000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGTT..............................................................................................................................................................................................2415.005040001
................................................................................................................................................................AAGATGTCGGAATAGCTGA...............................................................................................................................................................................................1914.004400000
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................2214.004030001
..............................................................................................................................................................GCAAGATGTCGGAATAGCTG................................................................................................................................................................................................2014.004130000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAC..............................................................................................................................................................................................2413.003300000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAGA.............................................................................................................................................................................................2513.003300000
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................2313.003000003
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTTT...............................................................................................................................................................................................2313.003030000
.............................................................................................................................................................GGCAAGATGTCGGAATAGC..................................................................................................................................................................................................1913.003030000
..............................................................................................................................................................GCAAGATGTCGGAATAGCT.................................................................................................................................................................................................1913.003020100
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCTG................................................................................................................................................................................................2313.003210000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAGAG-CA.........................................................................................................................................................................................2812.002200000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAGAG-C..........................................................................................................................................................................................2712.002200000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGC...............................................................................................................................................................................................2312.002100100
............................................................................................................................................................TGGCAAGATGTCGGAATT....................................................................................................................................................................................................1812.002010010
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGT...............................................................................................................................................................................................2212.002020000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAGG.............................................................................................................................................................................................2512.002200000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTC................................................................................................................................................................................................2212.002020000
......................................................................................................................................................................................................................................................................................CTATGCCTCATCTAGTCAAT........................................................................2011.001001000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCA.................................................................................................................................................................................................2111.001000010
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAGAG-...........................................................................................................................................................................................2611.001000001
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGC..................................................................................................................................................................................................2111.001010000
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTT................................................................................................................................................................................................2111.001010000
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTTT...............................................................................................................................................................................................2211.001010000
...............................................................................................................................................................CAAGATGTCGGAATAGCT.................................................................................................................................................................................................1811.001010000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAG..............................................................................................................................................................................................2411.001010000
............................................................................................................................................................TGGCAAGATGTCGGAATA....................................................................................................................................................................................................1811.001010000
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAA.........................................................................2111.001010000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGACT.............................................................................................................................................................................................2511.001000001
....................................................................................................................................................................................AG-CAAA----------------------------------------------------------------AA---GAAGATGATTTGAAAT--GC..............................................................................................2611.001100000
.............................................................................................................................................................GGCAAGATGTCGGAATAG...................................................................................................................................................................................................1811.001010000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCGA................................................................................................................................................................................................2211.001000001
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGATT.............................................................................................................................................................................................2411.001010000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTA................................................................................................................................................................................................2211.001010000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTACC..............................................................................................................................................................................................2420.501000001
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGTA..............................................................................................................................................................................................2420.501000001
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGCA..............................................................................................................................................................................................2420.501100000
dp5
TGTGT--------------GTGTGTG------CGTGTGT-------GTG----------------------------CGTGTG---------------------------T------GTGT-CCT----------------GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CAAA----------------------------------------------------------------AA---GAAGATGATTTGAAAT--GCGGCTATGCCTCATCTAGTCAATTGCATTCATTTGATTCTATCAACGATG------------AACCGATCAAACGATGAACCGATCAAACGATGASizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................23110068.0010068813244583345422389025664310
............................................................................................................................................................TGGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................2116373.0063733053543274513101209522420
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTG................................................................................................................................................................................................2214304.0043041254065237124853478141
............................................................................................................................................................TGGCAAGATGTCGGAATAGC..................................................................................................................................................................................................2011118.0011183646849921633412030
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGT...............................................................................................................................................................................................231549.00549025353101211711480
.............................................................................................................................................................GGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................201317.00317031501001000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTT................................................................................................................................................................................................221302.003024203010286060
............................................................................................................................................................TGGCAAGATGTCGGAATAG...................................................................................................................................................................................................191229.002291205000117050
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTG................................................................................................................................................................................................211214.00214020900001040
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................221111.00111010600000050
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGTT..............................................................................................................................................................................................24176.00760331001170240
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAT..............................................................................................................................................................................................24167.00670283036170100
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAA..............................................................................................................................................................................................24245.0090113402030670
.............................................................................................................................................................GGCAAGATGTCGGAATAGC..................................................................................................................................................................................................19139.003903900000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGTTT.............................................................................................................................................................................................25129.002901600008050
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTTT...............................................................................................................................................................................................23126.002611800007000
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................22125.002541400016000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCC.................................................................................................................................................................................................21124.002430712002000
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGT...............................................................................................................................................................................................22124.002402400000000
..............................................................................................................................................................GCAAGATGTCGGAATAGCT.................................................................................................................................................................................................19122.002212100000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGATT.............................................................................................................................................................................................25120.00202600106050
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGG...............................................................................................................................................................................................23120.00200420912020
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAAT........................................................................22120.002001631000000
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTT................................................................................................................................................................................................21118.001801800000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGC...............................................................................................................................................................................................23115.00150131523000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCA.................................................................................................................................................................................................21113.00131800004000
..............................................................................................................................................................GCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................21113.001311200000000
.............................................................................................................................................................GGCAAGATGTCGGAATAG...................................................................................................................................................................................................18113.001301300000000
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCA..........................................................................20112.001201200000000
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................23111.00110600104000
..............................................................................................................................................................GCAAGATGTCGGAATAGCTG................................................................................................................................................................................................20111.001101100000000
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGC..................................................................................................................................................................................................2119.0090600012000
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCTG................................................................................................................................................................................................2319.0090600101010
............................................................................................................................................................TGGCAAGATGTCGGAATA....................................................................................................................................................................................................1818.0080800000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAGA.............................................................................................................................................................................................2517.0070100001050
...............................................................................................................................................................CAAGATGTCGGAATAGCT.................................................................................................................................................................................................1816.0060500010000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAC..............................................................................................................................................................................................2416.0060210002010
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTA................................................................................................................................................................................................2215.0050400001000
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGTT..............................................................................................................................................................................................2315.0050500000000
............................................................................................................................................................TGGCAAGATGTCGGAATTT...................................................................................................................................................................................................1915.0050500000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGT..................................................................................................................................................................................................2015.0050500000000
................................................................................................................................................................AAGATGTCGGAATAGCTGA...............................................................................................................................................................................................1915.0050000201020
............................................................................................................................................................TGGCAAGATGTCGGAATAGA..................................................................................................................................................................................................2014.0040100003000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTC................................................................................................................................................................................................2214.0040110002000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAGAG-C..........................................................................................................................................................................................2714.0040000000040
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAA.........................................................................2113.0030300000000
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAG...................................................................................................................................................................................................2113.0030300000000
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTC...........................................................................1913.0030300000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTTG...............................................................................................................................................................................................2313.0030200100000
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................2413.0030300000000
.....................................................................................................................................................................................................................................................................................GCTATGCCTCATCTAGTCA..........................................................................1913.0030300000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGTC..............................................................................................................................................................................................2413.0030000000030
...............................................................................................................................................................CAAGATGTCGGAATAGCTG................................................................................................................................................................................................1913.0030300000000
...............................................................................................................................................................CAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................2013.0030200000010
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGC..................................................................................................................................................................................................2213.0030200001000
..............................................................................................................................................................GCAAGATGTCGGAATAGC..................................................................................................................................................................................................1813.0030300000000
............................................................................................................................................................TGGCAAGATGTCGGAATAT...................................................................................................................................................................................................1912.0020200000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAG..............................................................................................................................................................................................2412.0020000000020
............................................................................................................................................................TGGCAAGATGTCGGAAT.....................................................................................................................................................................................................1712.0020000000020
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGACT.............................................................................................................................................................................................2512.0020100000010
...........................................................................................................................................................TTGGCAAGATGTCGGAATAG...................................................................................................................................................................................................2012.0020200000000
................................................................................................................................................................AAGATGTCGGAATAGCTG................................................................................................................................................................................................1812.0020200000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGATG.............................................................................................................................................................................................2521.5030000000030
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAAC.............................................................................................................................................................................................2521.5030000000030
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAAT.............................................................................................................................................................................................2521.5030000000030
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGCTG................................................................................................................................................................................................2411.0010100000000
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCC.................................................................................................................................................................................................2211.0010010000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGTAT.............................................................................................................................................................................................2521.0020000000020
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGTTT.............................................................................................................................................................................................2411.0010100000000
droWil2
TATAT--------------ATACTTT------TTTTTTT-------GT-----GTGTG-----------------------TGTAAGGATC-----------ACG--AATG------TGAT-G-----A-----------AAACAACTAGTGGATTTGGCAAGATGTCGGAATAGCTGAAAGTCACACAAAATCATAAAATGTTTGCCGTTTTG-----------------------TTATTGT---TGTGAATTTTATTGATTT-CAAAAATTACGGCTATGCCTCATCTAGTCAATTGCATTAGTTTGATTAAGTCAACTGTG------------TGCCAA---------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................2316319.00631931100718453172264
............................................................................................................................................................TGGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................2113291.0032915561013147420345
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTG................................................................................................................................................................................................2212039.002039798055045547
............................................................................................................................................................TGGCAAGATGTCGGAATAGC..................................................................................................................................................................................................201729.00729981943923015
.............................................................................................................................................................GGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................201111.001111108101
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................22197.0097094021
............................................................................................................................................................TGGCAAGATGTCGGAATAG...................................................................................................................................................................................................19185.00851671502
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTG................................................................................................................................................................................................21176.0076075001
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAA..............................................................................................................................................................................................24169.006992117220
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGT...............................................................................................................................................................................................23164.00640232984
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTT................................................................................................................................................................................................22161.00615213023
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAT..............................................................................................................................................................................................24246.509372040224
............................................................................................................................................................TGGCAAGATGTCGGAATAGCC.................................................................................................................................................................................................21136.0036360000
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAAT........................................................................22115.0015015000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAC..............................................................................................................................................................................................24111.001105240
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAAA.............................................................................................................................................................................................25110.001011350
.............................................................................................................................................................GGCAAGATGTCGGAATAG...................................................................................................................................................................................................1819.00909000
.............................................................................................................................................................GGCAAGATGTCGGAATAGC..................................................................................................................................................................................................1919.00909000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGG...............................................................................................................................................................................................2318.00860110
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGC...............................................................................................................................................................................................2318.00800350
............................................................................................................................................................TGGCAAGATGTCGGAATAGCA.................................................................................................................................................................................................2118.00803500
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAA.........................................................................2118.00808000
..............................................................................................................................................................GCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................2117.00724100
............................................................................................................................................................TGGCAAGATGTCGGAATAGCG.................................................................................................................................................................................................2117.00770000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGATT.............................................................................................................................................................................................2526.501301642
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................2416.00602013
..............................................................................................................................................................GCAAGATGTCGGAATAGCT.................................................................................................................................................................................................1916.00605010
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCA..........................................................................2016.00606000
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................2316.00606000
..............................................................................................................................................................GCAAGATGTCGGAATAGCTG................................................................................................................................................................................................2015.00505000
.................................................................................................................................................................AGATGTCGGAATAGCTGA...............................................................................................................................................................................................1815.00530020
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGT...............................................................................................................................................................................................2214.00404000
...............................................................................................................................................................CAAGATGTCGGAATAGCT.................................................................................................................................................................................................1814.00413000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAAAGT...........................................................................................................................................................................................2714.00440000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGTT..............................................................................................................................................................................................2424.00813310
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAAT.............................................................................................................................................................................................2514.00402110
...............................................................................................................................................................CAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................2013.00303000
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTT................................................................................................................................................................................................2113.00303000
............................................................................................................................................................TGGCAAGATGTCGGAATA....................................................................................................................................................................................................1813.00301020
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGAA..............................................................................................................................................................................................2313.00303000
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGC..................................................................................................................................................................................................2213.00301200
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGAT..............................................................................................................................................................................................2322.50505000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGACT.............................................................................................................................................................................................2512.00202000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAAAA............................................................................................................................................................................................2612.00201010
.......................................................................................................................................................................................................................................................................................TATGCCTCATCTAGTCAAT........................................................................1912.00201010
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAG..............................................................................................................................................................................................2412.00202000
................................................................................................................................................................AAGATGTCGGAATAGCTG................................................................................................................................................................................................1812.00202000
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCTG................................................................................................................................................................................................2312.00202000
................................................................................................................................................................AAGATGTCGGAATAGCTGA...............................................................................................................................................................................................1912.00200110
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTC...........................................................................1912.00202000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAGT.............................................................................................................................................................................................2512.00200101
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCC.................................................................................................................................................................................................2211.00110000
.......................................................................................................................................................................................................ATGTTTGCCGTTTTG-----------------------TTATT................................................................................................................................2011.00100010
............................................................................................................................................................TGGCAAGATGTCGGAATAGA..................................................................................................................................................................................................2011.00101000
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAAA........................................................................2211.00101000
........................................................................................................................................................................................................................................................................................ATGCCTCATCTAGTCAAT........................................................................1811.00100010
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAAAG............................................................................................................................................................................................2611.00100100
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTTT...............................................................................................................................................................................................2311.00100100
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGC..................................................................................................................................................................................................2111.00100010
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAG...................................................................................................................................................................................................2111.00101000
.....................................................................................................................................................................................................................................................................................GCTATGCCTCATCTAGTCA..........................................................................1911.00101000
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................2211.00101000
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAATT.......................................................................2311.00101000
........................................................................................................G--AATG------TGAT-G-----A-----------AAACAACTAGTGGATT......................................................................................................................................................................................................................2711.00100010
droVir3
TGTGT--------------GTGTGTG------TGTGTGT-------GTG----------------------------TGTGTGTGTGTGTG-----------TTG--AATG-------GGA-GTGCAAC-----------TGACGAGTTATGAGATCAAGAAGATGAC---ATAAATAAGAG-AACTCAAGGCG---------------------------------------------------------------AAAG--------TGA--TTGACTAGGATATATCCTGCAAACTGCCTCGGATTGA----ACTAACAATA------------AATC-----------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
..............................................GTG----------------------------TGTGTGTGTGTGTG-----------TT..........................................................................................................................................................................................................................................................................19200.0510000000000100000000000000000000000000000000000000000000000000000000000000000000
droMoj3
TTTTC------------AA-------GTGTT-TCATA----------------GTGCT-------------------CGG------------------------T--AATG------TGGT-CCTCG----------------CAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAAA-TATCATAGAAT----CCAGAATTTATATTTTGTGTATT-TTATTGA-------------------------------GTACA--GCGGCTATGCCTCATCTAGTCAATTGCATTCATTTGACAGCAGCAACCAAG------------GACC-----------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................2314507.004507584201201919241759
............................................................................................................................................................TGGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................2112607.00260775213542391738
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTG................................................................................................................................................................................................2211467.001467625211612224569
............................................................................................................................................................TGGCAAGATGTCGGAATAGC..................................................................................................................................................................................................201672.00672820510105470
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAT..............................................................................................................................................................................................241132.00132196002978
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTT................................................................................................................................................................................................22198.009830023063
............................................................................................................................................................TGGCAAGATGTCGGAATAG...................................................................................................................................................................................................19179.007938002039
.............................................................................................................................................................GGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................20172.00727100010
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGT...............................................................................................................................................................................................23165.006518222536
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGATT.............................................................................................................................................................................................25164.00641010755
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTG................................................................................................................................................................................................21156.00565400011
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................22138.00383600011
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAA..............................................................................................................................................................................................24125.00256000514
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAAT........................................................................22119.00196000130
.............................................................................................................................................................GGCAAGATGTCGGAATAGC..................................................................................................................................................................................................19111.00111100000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGG...............................................................................................................................................................................................2319.009240021
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGC...............................................................................................................................................................................................2319.009030015
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGATTT-...........................................................................................................................................................................................2628.50170000017
............................................................................................................................................................TGGCAAGATGTCGGAATAGCA.................................................................................................................................................................................................2117.007200005
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAAT.............................................................................................................................................................................................2516.006000006
............................................................................................................................................................TGGCAAGATGTCGGAATAGCC.................................................................................................................................................................................................2125.5011100091
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCA..........................................................................2015.005500000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTTT...............................................................................................................................................................................................2315.005200003
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTC................................................................................................................................................................................................2215.005100004
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGTT..............................................................................................................................................................................................2415.005000113
............................................................................................................................................................TGGCAAGATGTCGGAATAGA..................................................................................................................................................................................................2015.005100004
............................................................................................................................................................TGGCAAGATGTCGGAATA....................................................................................................................................................................................................1824.509900000
..............................................................................................................................................................GCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................2114.004200011
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAA.........................................................................2114.004200020
..............................................................................................................................................................GCAAGATGTCGGAATAGCTG................................................................................................................................................................................................2014.004300010
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAC..............................................................................................................................................................................................2423.507000052
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGAT..............................................................................................................................................................................................2313.003300000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGATC.............................................................................................................................................................................................2513.003001002
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTA................................................................................................................................................................................................2213.003100002
..............................................................................................................................................................GCAAGATGTCGGAATAGCT.................................................................................................................................................................................................1913.003300000
.............................................................................................................................................................GGCAAGATGTCGGAATAG...................................................................................................................................................................................................1813.003300000
............................................................................................................................................................TGGCAAGATGTCGGAATAGT..................................................................................................................................................................................................2013.003000012
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGACT.............................................................................................................................................................................................2522.505000113
.....................................................................................................................................................................................................................................................................................GCTATGCCTCATCTAGTCAAT........................................................................2112.002200000
...............................................................................................................................................................CAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................2012.002100010
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGAA..............................................................................................................................................................................................2312.002200000
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAAC........................................................................2212.002000020
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................2312.002002000
................................................................................................................................................................AAGATGTCGGAATAGCTGA...............................................................................................................................................................................................1912.002100001
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTT................................................................................................................................................................................................2112.002200000
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTC...........................................................................1911.001100000
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAG...................................................................................................................................................................................................2111.001100000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAGT.............................................................................................................................................................................................2511.001000001
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAG..............................................................................................................................................................................................2411.001000001
.....................................................................................................................................................................................................................................................................................GCTATGCCTCATCTAGTCA..........................................................................1911.001100000
droGri2
----------------------------------------------------------------------------------------------------------------------------------------------ACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGACAG-CACAA--GATCACAA-AT----CAAGAAACTTTATTTTGTGTATTTTTATTGA-------------------------------GTACA--GCGGCTATGCCTCATCTAGTCAATTGCATTCATTTGACATCAACAA---CG------------AA-------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................231608.00608144464
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTG................................................................................................................................................................................................221308.00308166142
............................................................................................................................................................TGGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................211303.00303110193
............................................................................................................................................................TGGCAAGATGTCGGAATAGC..................................................................................................................................................................................................20144.00441133
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAT..............................................................................................................................................................................................24125.0025718
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAA..............................................................................................................................................................................................24120.0020119
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGT...............................................................................................................................................................................................23117.0017512
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................22115.0015150
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTG................................................................................................................................................................................................21113.0013130
.............................................................................................................................................................GGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................20111.0011110
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAAT........................................................................2217.00770
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTT................................................................................................................................................................................................2216.00624
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGATT.............................................................................................................................................................................................2515.00514
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGG...............................................................................................................................................................................................2313.00303
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGC...............................................................................................................................................................................................2313.00303
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAC..............................................................................................................................................................................................2412.00211
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAAT.............................................................................................................................................................................................2512.00202
............................................................................................................................................................TGGCAAGATGTCGGAATAG...................................................................................................................................................................................................1912.00202
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGCT..............................................................................................................................................................................................2412.00202
.............................................................................................................................................................GGCAAGATGTCGGAATAGC..................................................................................................................................................................................................1912.00220
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGAA..............................................................................................................................................................................................2311.00110
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................2211.00101
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGC..................................................................................................................................................................................................2111.00101
..............................................................................................................................................................GCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................2111.00110
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGTTT.............................................................................................................................................................................................2511.00110
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGATT.............................................................................................................................................................................................2411.00110
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGATTT-...........................................................................................................................................................................................2621.00202
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTA................................................................................................................................................................................................2211.00101
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAAG.............................................................................................................................................................................................2520.50110
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGATG.............................................................................................................................................................................................2520.50101
droAna3
TGTGT--------------GCAAG----------AAA----------------GTGCCCGTC---------------CC------------------------AG--GACGGGACA-GCAT-CCTCG-A-----------AGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGAGGATC--G----------AGCGAG------------------------TCATCGACCGAGACGA-----------ATTCCAAA--GCGGCTATGCCTCATCTAGTCAATTACATTACTTTGACACTTTCCACGAGG------------GA-------------------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................2312162.002162543226401091091153
............................................................................................................................................................TGGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................2111778.00177859618259107033
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTG................................................................................................................................................................................................2211458.0014587565847254424
............................................................................................................................................................TGGCAAGATGTCGGAATAGC..................................................................................................................................................................................................201410.00410102351112565
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTT................................................................................................................................................................................................221207.00207791071146
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................231126.001263028311522
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAT..............................................................................................................................................................................................241109.0010930206656
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGT...............................................................................................................................................................................................231105.00105350013570
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGC..................................................................................................................................................................................................22175.00757206582
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTG................................................................................................................................................................................................21172.00727000020
............................................................................................................................................................TGGCAAGATGTCGGAATAG...................................................................................................................................................................................................19161.006125000342
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................22152.00525200000
.............................................................................................................................................................GGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................20151.00515100000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGATT.............................................................................................................................................................................................25149.00494011376
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAA..............................................................................................................................................................................................24135.003511412152
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGTT..............................................................................................................................................................................................24130.003015003102
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTTT...............................................................................................................................................................................................23126.002610000151
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................22117.0017900080
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAG...................................................................................................................................................................................................21113.0013900040
............................................................................................................................................................TGGCAAGATGTCGGAATAGCC.................................................................................................................................................................................................21113.0013080050
............................................................................................................................................................TGGCAAGATGTCGGAATAGCA.................................................................................................................................................................................................21113.00132000101
............................................................................................................................................................TGGCAAGATGTCGGAATAGCG.................................................................................................................................................................................................21113.00130000130
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGTTT.............................................................................................................................................................................................25112.0012300090
.............................................................................................................................................................GGCAAGATGTCGGAATAGC..................................................................................................................................................................................................19112.00121200000
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGCTT................................................................................................................................................................................................24112.0012600240
..............................................................................................................................................................GCAAGATGTCGGAATAGCTG................................................................................................................................................................................................20110.00101000000
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGC..................................................................................................................................................................................................21110.0010300061
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCTG................................................................................................................................................................................................23110.0010210160
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAAT........................................................................2219.009720000
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGAT..............................................................................................................................................................................................2318.008800000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTTTT..............................................................................................................................................................................................2417.007300040
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTT................................................................................................................................................................................................2117.007700000
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGCC.................................................................................................................................................................................................2317.007070000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGG...............................................................................................................................................................................................2316.006103020
..............................................................................................................................................................GCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................2116.006500010
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGC...............................................................................................................................................................................................2315.005120110
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGATTT-...........................................................................................................................................................................................2624.509200070
..........................................................................................................................................................TTTGGCAAGATGTCGGAAT.....................................................................................................................................................................................................1914.004100030
............................................................................................................................................................TGGCAAGATGTCGGAATT....................................................................................................................................................................................................1814.004400000
...............................................................................................................................................................CAAGATGTCGGAATAGCT.................................................................................................................................................................................................1814.004200002
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGT...............................................................................................................................................................................................2214.004400000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAAT.............................................................................................................................................................................................2513.003000030
............................................................................................................................................................TGGCAAGATGTCGGAATAGCAT................................................................................................................................................................................................2213.003000030
..............................................................................................................................................................GCAAGATGTCGGAATAGCT.................................................................................................................................................................................................1913.003300000
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCA..........................................................................2013.003300000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTC................................................................................................................................................................................................2213.003200100
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTA................................................................................................................................................................................................2213.003100020
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAC..............................................................................................................................................................................................2423.006310020
............................................................................................................................................................TGGCAAGATGTCGGAATAGA..................................................................................................................................................................................................2012.002000011
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAAC.............................................................................................................................................................................................2512.002010010
...........................................................................................................................................................TTGGCAAGATGTCGGAATAG...................................................................................................................................................................................................2012.002100010
.....................................................................................................................................................................................................................................................................................GCTATGCCTCATCTAGTCAAT........................................................................2111.001100000
............................................................................................................................................................TGGCAAGATGTCGGAATAT...................................................................................................................................................................................................1911.001000010
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGAC.................................................................................................................................................................................................2311.001010000
..............................................................................................................................................................GCAAGATGTCGGAATAGCTT................................................................................................................................................................................................2011.001100000
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCTTT...............................................................................................................................................................................................2411.001100000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGTAT.............................................................................................................................................................................................2511.001000010
............................................................................................................................................................TGGCAAGATGTCGGAATAGCCT................................................................................................................................................................................................2211.001000010
............................................................................................................................................................TGGCAAGATGTCGGAATAGCGT................................................................................................................................................................................................2211.001000010
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGTT..............................................................................................................................................................................................2311.001100000
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................2411.001010000
droBip1
AGTGT--------------GT---------------A----------------GTGCT--------------------------------------------TTGCTAGTGGGACA-TGGTCCTTC--G-----------AGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CGCAGAGGATC--G----------A---------------------------------------------------------TTCGAAA--GCGGCTATGCCTCATCTAGTCAATTACATTACTTTGACACTTTCAACGAGG------------GATC-----------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
AAGG--------------------------------------------------TGTCTGTGCG-----------GT-------GAACATAATATACAAAATATTAAATA----------T-CCCTGCTGGAAATATAAAACAAAACTAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGAGGATC--G----------AGCAAG-----------------------TTGATCGATCCCAAAAATGTGAAAAATTTTTGAGAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGGATTCAACAA--------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TATAT--ATATTTTTTTAA-------GTGGCTTTAAA----------------GTGCA-----------------------------TT-------------TGCAAAGTT------AGCT-CCTTATT-----------AGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCGGATC--G----------AGAAAC------------------------TTATCGACCGAAAAAATGTGATTATTTTTTAAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTAATTTGACACTATCAACG------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TG---------------------------CCC-TCAA----------------GTGTC--------------------------------------------TGCGATGTT------GGCT-CCTTATT-----------AGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCGGATC--G----------AGCCAG------------------------TTATCGACCGAAAAAATGTGAATATTTTTGAAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGACACTATCAACGCGG------------TACC-----------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TG---------------------------CCC-CCAA----------------GTGTC--------------------------------------------TGCCAAGTA------AACT-CCTTGTT-----------AGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAAAG-CACAGCGGATC--G----------AGCCAC------------------------TTATCGACCGAAAATATGTGAATATTTTTTAAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTAATTTGACACTATCAACGTGAAAACAGTGACAAGA-------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
AGT-------------------------GCCC-CCAA----------------GTGCT--------------------------------------------TGCAAAGTTACACACAGCT-CCTCGTT-----------AGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCG-------------------------------------------------------------------AATATTTTTCAAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGACACTATCAACG------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
--------------------------GTGCCC-CTTA----------------GTGTT-------------------CAG-------TT-------------TGCAAAGTT------AGCT-CCTCGTT-----------AGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCGGATC--G----------AGTCTT-----------------------TTTATCGACCGAAAAAATGTGAATATTTTTTAAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGACACCAGCAACGAGGATGAAATA--A-TAAA-----------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
TTTCTAAATATTTTTTTAA-------GTGCCT-TAAA----------------GTGTGTGTGTGTTTTTTTTTTGAT-------AAGCAT--------------------C------AACT-CC----T-----------AGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCGGTTC--G----------AGACTT-----------------------TTCCTCAACCGGAAAAATGTGAAAATTTTTTAAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTAATTTGACACTATCAACGTGGGAGGATTC--A----------AGAGTTTGA---------TTATTASizeHit CountTotal NormTotal
No Reads
dm3
CCTTT--------TTTTAA-------GTGCCC-TT-T--------------GTGTGTA--------------------------------------------CCGAAAGTT------CGCT-CCACGTT-----------AGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCGGATC--G----------AACATT------------------------TTATCGTCCGAAAAAATGTGATTATTTT-TGAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGACTCTATCAGCGTTG------------GA-------------------------------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................231164230.0016423000000251274211161600000108721051101101000001921820681135133516913918858252112181188250300238460101021621000000000000000000100293911787831012925547420165825643776641123661663692295053441697115563391614060063004024001021605950821166123174332277593764310147331940329031889333621000315004069010001057213115010600020292643207262063814415796193569225636251356213763181661215101109410121934207657144661044217857369542764238172003692630012729251154415411799213314460883782920179216441541054223005533907180210878121210374105480522298081923072082118265058746446956417115158326910871196123187231105556701842428726441721715850132327892632867181518701682184822146249
............................................................................................................................................................TGGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................21177695.007769500000706254330000000828235901100000001332282835195474918624015144153106278000256346100000000000000000000002091631130130391352412548525880188260163010421243201629147187010403021905027030401101220966911411195242102891878322532371253900000000100151601100446019010018100010291042285105525040012617135951714948108316611119101000282316355226381495718321687074188000262002042000192503221684228467301656124001301446243218200285221166639054163597202189702102279108982991090033019618113159555671752365722844306302111172157038761960117628031155301146671259425553146361523061272
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTG................................................................................................................................................................................................22168032.0068032000011022610548010000063920371010000000082981138068791292756937954564738715854100001392031000000000000000000010078455363901485218333357226423146125532280011141461940463213310110170180039010610001213815310174138189115226341243180432163249707022794100000000005901300751018160820051021125634914352891711143791323579625022636523138705108040000628519334434798111602043379733805828031301612200384384070305212234010792201921118811260157328524175002481982643392846336633522455017215841867571120124152135313095011545788273513890147416090319170125501764233074216012212373913897471377937102241112417
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGATC.............................................................................................................................................................................................25114901.0014901000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000010000000000000000000000000000000000000000000000001010000092215671000000000000000000000000000000000000001000000000000000000000002000000000000000000000010000000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGC..................................................................................................................................................................................................20110370.0010370000000001000000000002314900000000001534668024527122491921000861290000000000000000000000010000003310010390022000000011200020010100000000000816200000304119203378249156122000000000000002010002010301100000059245320000720491321121180700210000024282922353112512761900008400121703110010373049162050112001028011142000151174229918235913904100881109088714012352683451923581286360003891426907002720301385261413548441664777200070
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAATC-...........................................................................................................................................................................................2619661.009661000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000066942967000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAA..............................................................................................................................................................................................2418016.008016000010050120000000001113000000000000116454501062394676651000000000000000000000000000050179933001090003915006161400001131131110240000000000000100003616801335665438381911581110141627200000000000000000013000100000000120810380008295473582211664604100120000081272133360471462385141531863200001116580010705000003001100012300302001000001342357352174407282880100039714314465012722401705321501615002339508300001110102221520422924000000
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................2316270.00627000000000010010000000691800000000000161410103081072109716153071000181000000000000000000000000000100030000160032002000040000120000000000000100000021317142019213332237327172517431800000000000100200000000002000001133181261850073274211100217210000000003448149142132818491072253382001010063390700010100013160060013006070100500012915693452544045531902000010044156211201554176132349127079120019157221213311013306013222645215496129200070
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAT..............................................................................................................................................................................................2413726.0037260000010001000000000034000000000000181233044014525811110000000000000000000000000000211411002250020512101011000000600024010020000002000000000002260461107101311266103552000000000000000000200010010000005735412000223922875441177000200000194331338671255111205645300110483001190600000610340000440010300002000098639197281683722201000142419256458140265313160218510865501110215650100060010119159850465044000000
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGC..................................................................................................................................................................................................2213119.0031190000000000000000000012038000000000001093220450115161143100037000000000000000000000000000000001000000000000000000010002000000000000000000010000247140131611726107652280000000000000000000000000000000022842800031027101001004000000000152311798945918118120001000012901300000350012900600400101000001000018522413320134161000200020103229177013236043132960681110026692221500171040122228682143111135000080
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGT...............................................................................................................................................................................................2311731.0017310000030001011000000001000000000000043021043220141436300000000000000000000000000000200310041901215182031003000012024001000000000100001000001010011113733105946710000000000011020001000002000000062221500028052123002026000020000151980589281121449100030001212020000060067005057002050011300007251182870563030001312821318700271645165838061470001735301100320005617341392744100010
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTA................................................................................................................................................................................................2211670.0016700000023102000000000014000000000000243011040042010021000000000000000000000000000009070100000000103002200000000101003000000001000000000101030379121825278804019100000000000000100010000010000000183100003134052044935000000000431710511423132140000282000100000010000000000000000000000000011106241602824474500000000036113016124333103700600166176000000000003014132079000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTT................................................................................................................................................................................................2211493.001493000000000000000000000102000000000001221200201000001000000000000000000000000000000020010000200000400000000000000100902000000000010000000000001110304215101000000000000000000000001000000002111155000150162000001100000000001322620000012000040000102100008007100000800002001000000112122031311400000712120577104536516860535600089401000110103399201744276101101010
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAAT........................................................................2211171.00117100001230094230000000000400000000000000000000000000000000110000000000000000000000030272543401145417117463671432513331681826616018141026123216100000000000000000000000000000000002000000000000000000100010000000000000000000010000000000000000000110002201000000000000100000000000000000100000000000000000000000000000000000000200000000000000000000000010000000000
............................................................................................................................................................TGGCAAGATGTCGGAATAG...................................................................................................................................................................................................191925.009250000000000000000000010017000000000033120000060400046400000727400000000000000000000000000000030120100200021100000000000002000000000000000200100000000000312304000000000000130000010100010000002821320006070010001160100000086472911000001000000007302000002001000000400009000000000013715417016030007373977304154873401523000812000000200008514520171032000020
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGC...............................................................................................................................................................................................231898.008980000001000000000000011000000000000001151015920043181591200000000000000000000000000000000100000012000001101000010000003011010011000200001010000002133242230036000000000001000000000000000000002010000007000010000000000000024621004022000021007100000005001200202300000000100000334248390445000003851151111312441188223530241400065000000000001052813000000
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............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAAT.............................................................................................................................................................................................251572.0057200000000000000000000000000000000000001100100000011000000000000000000000000000000000001000000010000000000000000000000000000000000000000001001248113002000002000000000000000000000000000000001003000000931052220020000000311534761041110001668000000000000000000000000000000000000007415123314000000010175010057111710320001129000000000005106442000000
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGCATC...............................................................................................................................................................................................251429.004290000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000324105000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAGA.............................................................................................................................................................................................251367.0036700000000000000000000001000000000000000000010000011000000670000000000000000000000033010000000000000000000000000020000000000000000010102111420202065102200232600000000000000100001000000000000101202000044591090000000000021001518325550000000000000000000000000000000000000000000010702010000000101610001213134400100023916000000000000001101000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCA.................................................................................................................................................................................................211348.00348000010000000000000000002000000000000000000000000000000000000000000000000000000000000000020000000000010100000000000000000000100000000000000000000100000000000000000000100000000200000000000010200001300000000000000000011850100001100001130000010000000020000000001000000000000537030100000115150010110133190111200031000000000005015017122829000000
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAG...................................................................................................................................................................................................211306.00306000000000000000000000201200000000002000110020000001000000350000000000000000000000000000002000000010001000000000000000000000000000000000001000020021131100700000000000000000001000001000000092100006030000000200000000026171601201111000000001100000003002000000100003000000000061184144140000000002211033638110430007900000000000100116937000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAC..............................................................................................................................................................................................242296.005920000000000100000000000000000000000001020031000000110000000000000000000000000000000031000000000100000000000000000000000000000000000000012000000000114121403000000000000001000000000000000000000000007031050000000000000303824121423600001086300330100000000200000110000001000000021753002702500000211010161206626123120810002218400000300003075511000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAGAG-...........................................................................................................................................................................................261283.00283000000000000000000001110000000000000000101000000100000002310000000000000000000000000000000000000000000000000000000000000000000000000061500100142101100205000000000000000000000000000000000000000200060000401000000000500013001275100000000000000000000000000000000000000000000000000000000000001900000313206000000027412000000000000001305000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGG...............................................................................................................................................................................................231271.002710000000000000000000000000000000000001010005000201120100000000000000000000000000000000100010001000011310100000110330600001010000000000000000000010000201000000000000000000000010000000000000211000020000001020000000000211080001100100000000020100000200100000400000100000000044613320210000001320291303212416101112000410000000000001073130000000
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAA.........................................................................211260.0026000000000010020000000000000000000000000000000000000000000000000000000000000000000086016900103280050184221123708100014369312300000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGATT.............................................................................................................................................................................................251250.0025000000000000000000000000000000000000010000010010010300000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000020010020000000000000000000000000000000010400002025200500000000000001120201402300001930000000000000001000001000000000000001118182900000210035000329716606100061010000010000213206574000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAG..............................................................................................................................................................................................241235.0023500000000010000000000010000000000002011000200000000000000232400000000000000000000000000100010000100100000000001000000000000000000000000030300000204011310002000000000000000000000000010000001203100010103022112000000000222250234280000000000101000000000000000000100000000000230516140000004101330101197141010001710000000000001001010000000
................................................................................................................................................................AAGATGTCGGAATAGCTGA...............................................................................................................................................................................................191219.002190000000000000000000002000000000000001000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000320005338620001000000000000000000000000000000001022100000518000000000000000071221230000100000000000500000000000000000010000000000000041507115130000000000310010113003300042000000000000050000000000
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................221199.0019900000000000100000000020100000000000000000000010000000000110000000000000000000000020000000000000010000000000000000000000000000000000000000000000000110300200000000000000000000000000000000081300008090000001000000000011991000010000000000130000000300100000000010000000000002030402000000010192100230110010120004310000000000411556612000010
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................221175.001750000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000010100000000000000000000000000000000000000050000000008101000000000000002000000002000100000003060000102300000000000000000013100021100000000000000000000000000000000000000000006253911311100000000033100023214202200046000000000003021243000000
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGCTATC..............................................................................................................................................................................................261157.00157000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012631000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGCTA................................................................................................................................................................................................241147.00147000000000000000000000000000000000000100100010000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010104301300102100000000000000000000000000000000000200000000001111000000000000060027144000011000000000000000000000000000000000000141311718000000000300000232210000001613000000000000001113000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCC.................................................................................................................................................................................................211140.00140000001000000006000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000100000000000000010000101000000000000000000100000000000000001101100010000000000000000000011050000000000000000120000000000000000000000000000000006482502000002000210108210011013800011000000000005063037000000
............................................................................................................................................................TGGCAAGATGTCGGAATA....................................................................................................................................................................................................181139.00139000000000000000000000001000000000000100100000000000000001070000000000000000000000000000000000000000000000000000000000000000000000001122800000100000000000007000000000000000000000010000000000110000050003900800000000000015700001000000000000100000000000000000000000000000000021411140000001100201020000001000012000000000000010010000000
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCTG................................................................................................................................................................................................231132.001320000000000000000000000000000000000000000010001010000000000000000000000000000000000000000000001000000000000000000100000000000000000000000000000001003010010000000000000000000000000000000005011000100000000000000000000154300370110000000039000000000000000001000000000000001005070200000000021310002259307100033000000000000002421000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAAC.............................................................................................................................................................................................251116.0011600000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010020100000000000000000000000000000000000000000000000000000000000000000000002111120200004821000000000000000000000000000000000000121307000000000004100001071000000003000000000000000000000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAGAG-C..........................................................................................................................................................................................271114.0011400000000000000000000000000000000000000000010001000000000120000000000000000000000000000000000000000000000000000000000000000000000010003120030000010232000000000000000000000000000000000000000000200000400050100000000020001014164300000000000000000000000000000000000000000000000000000000000050000003620000000206000000000000002022000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCG.................................................................................................................................................................................................211112.00112000000000000000000000001000000000000000000000000100000000000000000000000000000000000000010000000000000000000000000100000000000000000000000000000000000000000000000000000100010000030000000000000010000000000000000000001050000000000000000200000000100200000000000100000000000402001000007870010001410301207800000000000000003020001000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTC................................................................................................................................................................................................221111.0011100000000000010000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010110100000000000010000000000000000000000420000022000000100000000000210200020000000710000010000010000000001000000000000001110504030000020203102021073404100011000000000003021100000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGTT..............................................................................................................................................................................................241102.001020000000000000000000000000000000000000000001000000000000000000000000000000000000000100000000000001000000000000000000000000000000000000000000000000200101000000000000000000000000000000000006020000000100000000000000000222100010010000010000000000001000000000000000000100001002020100000123001000203214077000000000000000014084513000000
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTG................................................................................................................................................................................................21187.00870000000000000000000000010000000000001000000000000000000002000000000000000000000001000100000000000000000000000000000000000000000000000020000011000210010000000000000000000000000000100000001010000000000002000000000000136000030100000000001000000000000000000000000000000003180505020100000001110000201200300030000000000000012011000000
.............................................................................................................................................................GGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................20185.0085000000000000000000000000000000000000000000000000000000001300000000000000000000000000000000000000000500000000000000000000000000000000000000000000000011000000000000000000000010100020000000101000000200000000000000000003500000000000000000000000001000000000000001000000000090405010000000001000010101204500002000000000002070632000000
................................................................................................................................................................AAGATGTCGGAATAGCTG................................................................................................................................................................................................18183.008300000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000310001120200000000000000000000000000000000000000000001000000020000000000071151500000000000000001000000000000000000000000000000000381501230000000000000000011101200000000000000000000000000000
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCA..........................................................................20178.0078000000000100000000000000000000000000000000000000000000000200000000000000000000000100500031120041312110140110204101202200000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTTC...............................................................................................................................................................................................23173.007300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000004018000100000001000000000000000000000000000101000000000010610010010000000000000000000000000000000000
..............................................................................................................................................................GCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................21173.00730000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003030000000000000000000000001000000000001000000201000000000000000000001100100010000000032000000000000000000000000000000004241115050000000001300000003000000000000000000000011200000000
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGATC.............................................................................................................................................................................................24172.007200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004824000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAAA........................................................................22168.00680000000000000000000000000000000000000000000000000000000000000000000000000000000000006100934003136200302700121011100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGC..................................................................................................................................................................................................21166.00660000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000001000000000000000000000000000000000001010000000000000000000000000032000000000000000000000000010011000000000000000000000000040300000000002010004103041000021000000000040131313000000
.................................................................................................................................................................AGATGTCGGAATAGCTGA...............................................................................................................................................................................................18165.00650000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100001301000000000000000000000000000000000000000000000100000050000000000005135100010000000000010000000000000000000000000000000001130113030000000001110000011002300000000000000000020000000000
...............................................................................................................................................................CAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................20162.0062000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000100230220000000000000000000000000000000000000601000010030000101000000000131101003030000000000100000000000000000000000000000000060201110000000000000000012001000021000000000000020200000000
.................................................................................................................................................................AGATGTCGGAATAGCTGAA..............................................................................................................................................................................................19150.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000794201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTTT...............................................................................................................................................................................................23149.0049000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001100000000000000000000000002200000000000000000100000000000000000000000000000000010001000000010200000050000205200001000000000009043020000010
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAAG.............................................................................................................................................................................................25245.0090000000000000000000000100000000000010000000000000001000000000000000000000000000000000000000000000000000000001000100100000000000000000003000001032000000000000000000000000000000000000000000000200000080100020000000000200112005022000000000000000000000000000000000000000000022408060000000006100010236000000023000000000000000010000000
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGCTT................................................................................................................................................................................................24142.0042000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000001000000000020000000000000002020010021103300032000000100002082300000000
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCTGATC.............................................................................................................................................................................................26141.004100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGCA..............................................................................................................................................................................................24140.0040000000000000000000000100000000000000000000000000011010000000000000000000000000000000100000000000000010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100000001000000010000100000000000000000000000000000000030400130000021008000001031000100010000000000000000000000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTAT...............................................................................................................................................................................................23140.00400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000247001000000000000000000000000000000000000011000000000000000000000000000002000000000002000000000000
..........................................................................................................................................................TTTGGCAAGATGTCGGAAT.....................................................................................................................................................................................................19138.0038000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000010000000000000000000012300000000000000000000000000000000000000002000000000000011000000000000000030001000100000100000000007062113000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGA..................................................................................................................................................................................................20138.00380000000000000000000000000000000000100000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000010000000000000001000000000000000000000000000000000000100000000000200000011000000100006043112000000
................................................................................................................................................................AAGATGTCGGAATAGCT.................................................................................................................................................................................................17137.003700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030191500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGTC..............................................................................................................................................................................................24235.507100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000004125000000000000000000000000000000000000000000000000000000001000001100000000000000000000000000000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCAT................................................................................................................................................................................................22135.00350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000710000000000000000000000000000000000000200010000000001000000000000001000000000000000014021221000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTAC...............................................................................................................................................................................................23135.00350000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000256000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
droSim2
TG---------------------------CCC-TTTT--------------GAGTGTT--------------------------------------------TTGAAAGTT------CGCT-CCTCGTT-----------AGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCGGATC--G----------AGCCTC------------------------TTATCGTCCGAAAAAATGTGATTATTTT-TGAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGACGCTATCAACGTTG------------GA-------------------------------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................23164763.00647639594223511373101980513070132186708890499284845211851101
............................................................................................................................................................TGGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................21136080.003608016088892527210130216966519643731570232491163376812690610
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTG................................................................................................................................................................................................22125744.00257447627414811320290722273770237780469466682822740151
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAA..............................................................................................................................................................................................24110228.00102282422746001525985396222171234885201101
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................2315394.0053941995825441780513344508290242825993311
............................................................................................................................................................TGGCAAGATGTCGGAATAGC..................................................................................................................................................................................................2014613.0046133115501167332576444635536717065912385836
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTA................................................................................................................................................................................................2211320.00132007114001209528416130057929000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAT..............................................................................................................................................................................................2411224.0012243361031003702692351431831528000
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGC..................................................................................................................................................................................................2211028.0010282284157480203129169621102024
............................................................................................................................................................TGGCAAGATGTCGGAATAGCC.................................................................................................................................................................................................211901.009011265523200001000010000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGG...............................................................................................................................................................................................231652.006524126493100119310301000
............................................................................................................................................................TGGCAAGATGTCGGAATAG...................................................................................................................................................................................................191353.00353230238728563761328224116
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGT...............................................................................................................................................................................................231334.00334036200483043359252101012
............................................................................................................................................................TGGCAAGATGTCGGAATAGCG.................................................................................................................................................................................................211300.0030022166620068000000000
............................................................................................................................................................TGGCAAGATGTCGGAATA....................................................................................................................................................................................................181299.00299060024130450310000000
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGCC.................................................................................................................................................................................................231257.0025705819900000000000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTT................................................................................................................................................................................................221256.0025621086400219106302757021
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAAT.............................................................................................................................................................................................251244.002441212000634590301000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCA.................................................................................................................................................................................................211201.002010176110064210037000
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................221175.0017521033810074730216001
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGCTA................................................................................................................................................................................................241137.001370150001713522600230000
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCTG................................................................................................................................................................................................231126.0012603240105274101267000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGATT.............................................................................................................................................................................................251121.0012108280004631331001000
................................................................................................................................................................AAGATGTCGGAATAGCTGA...............................................................................................................................................................................................191120.001200111000234791100000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAC..............................................................................................................................................................................................242112.0022401054100664330144110000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGC...............................................................................................................................................................................................23187.0087051000012162291416001
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAG...................................................................................................................................................................................................21181.008101614109122241117110
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGCG.................................................................................................................................................................................................23174.00741185400010000000000
.............................................................................................................................................................GGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................20170.00700232100013010018030
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................22158.00580318120002532022009
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGC..................................................................................................................................................................................................21150.0050029701053211001000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAGA.............................................................................................................................................................................................25149.00490010109132021020000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAG..............................................................................................................................................................................................24144.0044002050871061041000
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAA.........................................................................21143.00430001303011250000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAAC.............................................................................................................................................................................................25141.00410040003321100000000
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................24137.0037012500100110035000
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTG................................................................................................................................................................................................21136.00360101010004020241011
................................................................................................................................................................AAGATGTCGGAATAGCTG................................................................................................................................................................................................18133.0033000000001230000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAAG.............................................................................................................................................................................................25229.005800200017519112011000
.................................................................................................................................................................AGATGTCGGAATAGCTGA...............................................................................................................................................................................................18127.0027022000131116100000
............................................................................................................................................................TGGCAAGATGTCGGAATAGA..................................................................................................................................................................................................20127.0027123020010000000000
..............................................................................................................................................................GCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................21127.0027011510033220000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAGAG-...........................................................................................................................................................................................26126.002600000059821010000
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGCA.................................................................................................................................................................................................23125.002502200062841000000
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGCTT................................................................................................................................................................................................24124.002404200033450003000
............................................................................................................................................................TGGCAAGATGTCGGAAT.....................................................................................................................................................................................................17123.0023000000126410000000
.................................................................................................................................................................AGATGTCGGAATAGCTG................................................................................................................................................................................................17122.0022000000100021000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGTT..............................................................................................................................................................................................24120.002005200003100045000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCAA................................................................................................................................................................................................22119.001908000010720001000
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAAT........................................................................22119.0019000131012110000000
..........................................................................................................................................................TTTGGCAAGATGTCGGAAT.....................................................................................................................................................................................................19118.0018015100000200000000
................................................................................................................................................................AAGATGTCGGAATAGCT.................................................................................................................................................................................................17116.0016000000010015000000
...............................................................................................................................................................CAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................20116.001601400032132000000
..............................................................................................................................................................GCAAGATGTCGGAATAGCT.................................................................................................................................................................................................19116.0016010500000001000000
............................................................................................................................................................TGGCAAGATGTCGGAA......................................................................................................................................................................................................16115.001500000046203000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTTT...............................................................................................................................................................................................23114.001406200002000013000
..................................................................................................................................................................GATGTCGGAATAGCTGA...............................................................................................................................................................................................17113.001300000008203000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTAT...............................................................................................................................................................................................23112.001200000001210080000
................................................................................................................................................................AAGATGTCGGAATAGCTGAA..............................................................................................................................................................................................20112.001200000000219000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAGAG-C..........................................................................................................................................................................................27111.001100000056000000000
...............................................................................................................................................................CAAGATGTCGGAATAGCT.................................................................................................................................................................................................18111.001107200010100000000
............................................................................................................................................................TGGCAAGATGTCGGA.......................................................................................................................................................................................................15110.001000000001045000000
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCC.................................................................................................................................................................................................22110.001007300000000000000
..........................................................................................................................................................TTTGGCAAGATGTCGGAA......................................................................................................................................................................................................1819.00905202000000000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGCA..............................................................................................................................................................................................2419.00900200020310010000
..................................................................................................................................................................GATGTCGGAATAGCTG................................................................................................................................................................................................1619.00900000000405000000
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAAA........................................................................2218.00800010000250000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGTA..............................................................................................................................................................................................2418.00800000020210012000
...................................................................................................................................................................ATGTCGGAATAGCTGA...............................................................................................................................................................................................1618.00800000010403000000
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGG...............................................................................................................................................................................................2218.00802500010000000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGACT.............................................................................................................................................................................................2527.001400200074100000000
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGCAA................................................................................................................................................................................................2417.00700200001130000000
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCTGG...............................................................................................................................................................................................2417.00700700000000000000
.............................................................................................................................................................GGCAAGATGTCGGAATAGC..................................................................................................................................................................................................1917.00701022000001000001
............................................................................................................................................................TGGCAAGATGTCGGAATT....................................................................................................................................................................................................1817.00707000000000000000
.................................................................................................................................................................AGATGTCGGAATAGCT.................................................................................................................................................................................................1616.00600000000105000000
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCA..........................................................................2016.00600000001320000000
..............................................................................................................................................................GCAAGATGTCGGAATAGCTG................................................................................................................................................................................................2016.00601020000101000010
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGAA..............................................................................................................................................................................................2316.00601100000100021000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTC................................................................................................................................................................................................2215.00501000021000001000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAGT.............................................................................................................................................................................................2515.00500000011200010000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCGA................................................................................................................................................................................................2215.00500000021100001000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAACA-...........................................................................................................................................................................................2615.00500000021200000000
droSec2
TTTG--------------------------------A----------------GTGTT--------------------------------------------TTGAAAGTT------TGCT-CCTCGTT-----------AGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCGGATC--G----------AGCCTC------------------------TTATCGTCCGAAAAAATGTGATTATTTT-TGAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGACGCTATCAACGTTG------------GA-------------------------------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................23111072.0011072239039604504218
............................................................................................................................................................TGGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................2118857.00885722635591717286
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTG................................................................................................................................................................................................2216390.00639030222287935146
............................................................................................................................................................TGGCAAGATGTCGGAATAGC..................................................................................................................................................................................................2011411.00141126210466241
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................231907.009071774552669
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGC..................................................................................................................................................................................................221443.00443593086016
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTT................................................................................................................................................................................................221357.003578326626
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTG................................................................................................................................................................................................211242.00242240200
.............................................................................................................................................................GGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................201213.00213210300
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................221212.00212209210
............................................................................................................................................................TGGCAAGATGTCGGAATAG...................................................................................................................................................................................................191186.001868981133
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAA..............................................................................................................................................................................................241178.001785727886
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGT...............................................................................................................................................................................................231166.001666479203
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAT..............................................................................................................................................................................................241156.001562779464
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................22155.0055252091
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAG...................................................................................................................................................................................................21142.0042251601
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAAT........................................................................22134.003434000
..............................................................................................................................................................GCAAGATGTCGGAATAGCTG................................................................................................................................................................................................20128.002826200
............................................................................................................................................................TGGCAAGATGTCGGAATAGCA.................................................................................................................................................................................................21127.0027131400
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGATT.............................................................................................................................................................................................25123.002311480
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCTG................................................................................................................................................................................................23123.002356120
..............................................................................................................................................................GCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................21121.002117130
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAC..............................................................................................................................................................................................24219.503979212
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGG...............................................................................................................................................................................................23117.00179440
................................................................................................................................................................AAGATGTCGGAATAGCTGA...............................................................................................................................................................................................19116.00162770
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGC...............................................................................................................................................................................................23116.001621040
.............................................................................................................................................................GGCAAGATGTCGGAATAGC..................................................................................................................................................................................................19116.001615010
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGC..................................................................................................................................................................................................21116.001651100
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGTT..............................................................................................................................................................................................24115.001531110
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTA................................................................................................................................................................................................22114.00146530
............................................................................................................................................................TGGCAAGATGTCGGAATAGCG.................................................................................................................................................................................................21113.001313000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAAT.............................................................................................................................................................................................25112.00120570
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTT................................................................................................................................................................................................21112.001211100
..........................................................................................................................................................TTTGGCAAGATGTCGGAAT.....................................................................................................................................................................................................19112.00128310
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAA.........................................................................21111.001111000
............................................................................................................................................................TGGCAAGATGTCGGAATAGA..................................................................................................................................................................................................20111.00112900
.............................................................................................................................................................GGCAAGATGTCGGAATAG...................................................................................................................................................................................................18111.001111000
..............................................................................................................................................................GCAAGATGTCGGAATAGCT.................................................................................................................................................................................................19110.001010000
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGCTT................................................................................................................................................................................................2419.0092520
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTTT...............................................................................................................................................................................................2319.0093600
...............................................................................................................................................................CAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................2019.0095130
............................................................................................................................................................TGGCAAGATGTCGGAATAGCC.................................................................................................................................................................................................2118.0081700
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................2417.0074120
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGT...............................................................................................................................................................................................2215.0055000
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCA..........................................................................2015.0055000
.......................................................................................................................................................................................................................................................................................TATGCCTCATCTAGTCAATTG......................................................................2115.0054100
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGCTA................................................................................................................................................................................................2415.0053011
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTA................................................................................................................................................................................................2114.0044000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTC................................................................................................................................................................................................2214.0042110
...............................................................................................................................................................CAAGATGTCGGAATAGCT.................................................................................................................................................................................................1814.0044000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGACT.............................................................................................................................................................................................2523.5070160
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGTTT.............................................................................................................................................................................................2513.0031110
...........................................................................................................................................................TTGGCAAGATGTCGGAATAG...................................................................................................................................................................................................2013.0031200
............................................................................................................................................................TGGCAAGATGTCGGAATA....................................................................................................................................................................................................1813.0033000
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGAT..............................................................................................................................................................................................2313.0032010
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTC...........................................................................1913.0033000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCAT................................................................................................................................................................................................2213.0030300
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGCA.................................................................................................................................................................................................2313.0030210
............................................................................................................................................................TGGCAAGATGTCGGAATAGT..................................................................................................................................................................................................2013.0030300
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTTTT..............................................................................................................................................................................................2412.0020200
.............................................................................................................................................................GGCAAGATGTCGGAATAGCA.................................................................................................................................................................................................2012.0022000
..........................................................................................................................................................TTTGGCAAGATGTCGGAATT....................................................................................................................................................................................................2012.0020200
......................................................................................................................................................................................................................................................................................CTATGCCTCATCTAGTCAAT........................................................................2012.0021010
..............................................................................................................................................................GCAAGATGTCGGAATAGCTGAA..............................................................................................................................................................................................2212.0021010
.....................................................................................................................................................................................................................................................................................GCTATGCCTCATCTAGTCAAT........................................................................2112.0022000
.................................................................................................................................................................AGATGTCGGAATAGCTGA...............................................................................................................................................................................................1812.0020020
...........................................................................................................................................................................................................................................................AATGTGATTATTTT-TGAAAA--GC..............................................................................................2212.0020020
...............................................................................................................................................................CAAGATGTCGGAATAGCTG................................................................................................................................................................................................1912.0022000
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGCC.................................................................................................................................................................................................2312.0020200
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGAA..............................................................................................................................................................................................2312.0022000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAG..............................................................................................................................................................................................2412.0020020
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGT..................................................................................................................................................................................................2212.0021100
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAAG.............................................................................................................................................................................................2521.5031020
droYak3
TTTTT----------TTAA-------GTGCCC-CAAAGTCTGAAGTGTTTTGAA------------------------------------------------TGTCTCGTT------TTCT-CCTCGTT-----------AGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCGGATC--G----------AGCCTT------------------------TGATCGTCCGAAAAAATGTGAATATTTT-TTAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGACTCTATCAGCGTTG------------GA-------------------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................2317511.0075114620842330380347225111914210
............................................................................................................................................................TGGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................2115012.0050126251398280161652215896183530
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTG................................................................................................................................................................................................2213805.003805820843264732661146266640
............................................................................................................................................................TGGCAAGATGTCGGAATAGC..................................................................................................................................................................................................201849.008498515421633336111220
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................231709.0070912313930318161085150
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTG................................................................................................................................................................................................211263.002630259100020010
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTT................................................................................................................................................................................................221241.00241158520121341010
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGC..................................................................................................................................................................................................221230.00230433165112791070
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGT...............................................................................................................................................................................................231214.0021419913345890000
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................221193.001930191100100000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCC.................................................................................................................................................................................................211156.001565709800010000
.............................................................................................................................................................GGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................201145.001450143000000020
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAT..............................................................................................................................................................................................241137.0013764126100630000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAA..............................................................................................................................................................................................241103.0010354419331210007
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGCC.................................................................................................................................................................................................23194.00941108300000000
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................22175.007518326200160010
............................................................................................................................................................TGGCAAGATGTCGGAATAG...................................................................................................................................................................................................19171.00710330000310160
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAAT........................................................................22162.0062060200000000
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCTG................................................................................................................................................................................................23148.00481152230070000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGTT..............................................................................................................................................................................................24135.00352151010160000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTTT...............................................................................................................................................................................................23132.00321191100100000
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAG...................................................................................................................................................................................................21122.0022015000070000
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGC..................................................................................................................................................................................................21121.002178000050010
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGG...............................................................................................................................................................................................23121.002164540020000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGATT.............................................................................................................................................................................................25120.0020211000160000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGC...............................................................................................................................................................................................23118.001800440550000
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGCTT................................................................................................................................................................................................24115.001507000080000
..............................................................................................................................................................GCAAGATGTCGGAATAGCTG................................................................................................................................................................................................20114.0014014000000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGTTT.............................................................................................................................................................................................25113.001336000040000
.............................................................................................................................................................GGCAAGATGTCGGAATAGC..................................................................................................................................................................................................19112.0012012000000000
..............................................................................................................................................................GCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................21112.001207210020000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTA................................................................................................................................................................................................22112.001206100140000
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................24111.001124400010000
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTT................................................................................................................................................................................................21111.0011011000000000
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAA.........................................................................21111.0011011000000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAC..............................................................................................................................................................................................24210.5021041600010000
................................................................................................................................................................AAGATGTCGGAATAGCTGA...............................................................................................................................................................................................1918.00802200040000
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGT...............................................................................................................................................................................................2218.00808000000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCG.................................................................................................................................................................................................2118.00870100000000
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCC.................................................................................................................................................................................................2217.00740300000000
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCA..........................................................................2016.00606000000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTTTT..............................................................................................................................................................................................2416.00602000040000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTC................................................................................................................................................................................................2215.00500200030000
..............................................................................................................................................................GCAAGATGTCGGAATAGCT.................................................................................................................................................................................................1915.00505000000000
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGCG.................................................................................................................................................................................................2315.00550000000000
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGAC.................................................................................................................................................................................................2315.00510400000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCA.................................................................................................................................................................................................2114.00410000030000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGCT..............................................................................................................................................................................................2414.00400000010003
...........................................................................................................................................................TTGGCAAGATGTCGGAATAG...................................................................................................................................................................................................2014.00403000010000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAG..............................................................................................................................................................................................2413.00300100110000
...............................................................................................................................................................CAAGATGTCGGAATAGCTG................................................................................................................................................................................................1913.00302100000000
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGAA..............................................................................................................................................................................................2313.00303000000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAAT.............................................................................................................................................................................................2513.00301000020000
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGAT..............................................................................................................................................................................................2313.00303000000000
................................................................................................................................................................AAGATGTCGGAATAGCTG................................................................................................................................................................................................1813.00303000000000
.....................................................................................................................................................................................................................................................................................GCTATGCCTCATCTAGTCAAT........................................................................2113.00303000000000
.........................................................................................................................................................ATTTGGCAAGATGTCGGAATAGC..................................................................................................................................................................................................2312.00201100000000
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGA..................................................................................................................................................................................................2212.00210100000000
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGCA.................................................................................................................................................................................................2312.00201000010000
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTC...........................................................................1912.00202000000000
............................................................................................................................................................TGGCAAGATGTCGGAATA....................................................................................................................................................................................................1812.00201010000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGT..................................................................................................................................................................................................2012.00200200000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGATTT-...........................................................................................................................................................................................2621.50301000020000
droEre2
TG---------------------------CCC-TTAA----------------GTGTT--------------------------------------------CCGCAAGTT------CGCT-CCTCGTT-----------AGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCGGATC--G----------AGCCTC------------------------TTATCGTCCGAAAAAATGTGAATATTTT-TGAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGACACTATCAACGTTG------------GA-------------------------------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................2316496.0064962115183551323389444178
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTG................................................................................................................................................................................................2216200.0062003526326333226025036
............................................................................................................................................................TGGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................2115721.00572121302031832722600
............................................................................................................................................................TGGCAAGATGTCGGAATAGC..................................................................................................................................................................................................201716.007161911752468330
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................231611.0061114817312403280
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTT................................................................................................................................................................................................221390.00390162020204220
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGT...............................................................................................................................................................................................231296.00296133011142118
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTG................................................................................................................................................................................................211279.00279275000400
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGC..................................................................................................................................................................................................221256.0025639512195140
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................221198.001981750004118
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................221164.001645300110190
.............................................................................................................................................................GGCAAGATGTCGGAATAGCT.................................................................................................................................................................................................201148.00148145000300
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAT..............................................................................................................................................................................................241136.001363111186124
............................................................................................................................................................TGGCAAGATGTCGGAATAG...................................................................................................................................................................................................19189.0089370005020
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCTG................................................................................................................................................................................................23179.0079290104810
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAA..............................................................................................................................................................................................24177.0077372103142
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGC..................................................................................................................................................................................................21138.003841003030
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAG...................................................................................................................................................................................................21136.0036190001700
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGTT..............................................................................................................................................................................................24130.0030180001020
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGATT.............................................................................................................................................................................................25127.002730012210
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTTT...............................................................................................................................................................................................23126.002680001710
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAAT........................................................................22124.002422200000
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGCTT................................................................................................................................................................................................24123.002360001520
............................................................................................................................................................TGGCAAGATGTCGGAATAGCG.................................................................................................................................................................................................21122.002222000000
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGAT..............................................................................................................................................................................................23118.001850000013
.............................................................................................................................................................GGCAAGATGTCGGAATAGC..................................................................................................................................................................................................19117.001716000100
..............................................................................................................................................................GCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................21116.001613000120
..............................................................................................................................................................GCAAGATGTCGGAATAGCTG................................................................................................................................................................................................20114.001414000000
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTT................................................................................................................................................................................................21113.001313000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGC...............................................................................................................................................................................................23113.00131001533
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTA................................................................................................................................................................................................22112.00129000300
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGCC.................................................................................................................................................................................................23111.001101000010
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGG...............................................................................................................................................................................................23111.00115011220
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGT...............................................................................................................................................................................................22110.00109100000
..............................................................................................................................................................GCAAGATGTCGGAATAGCT.................................................................................................................................................................................................19110.00107000210
............................................................................................................................................................TGGCAAGATGTCGGAATAGCA.................................................................................................................................................................................................21110.00103000700
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAAT.............................................................................................................................................................................................2519.0094000500
............................................................................................................................................................TGGCAAGATGTCGGAATAGCC.................................................................................................................................................................................................2119.0092210400
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAC..............................................................................................................................................................................................2428.50176200810
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCA..........................................................................2018.0088000000
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCTGT...............................................................................................................................................................................................2417.0073000400
...........................................................................................................................................................TTGGCAAGATGTCGGAATAG...................................................................................................................................................................................................2017.0077000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTC................................................................................................................................................................................................2216.0064000200
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGTTT.............................................................................................................................................................................................2516.0064000200
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAA.........................................................................2115.0055000000
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................2414.0042000200
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGTA..............................................................................................................................................................................................2414.0042000200
...............................................................................................................................................................CAAGATGTCGGAATAGCTG................................................................................................................................................................................................1914.0044000000
................................................................................................................................................................AAGATGTCGGAATAGCTGA...............................................................................................................................................................................................1914.0040000310
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGACT.............................................................................................................................................................................................2524.0081000430
..........................................................................................................................................................TTTGGCAAGATGTCGGAAT.....................................................................................................................................................................................................1913.0032000100
..............................................................................................................................................................GCAAGATGTCGGAATAGCTT................................................................................................................................................................................................2013.0033000000
....................................................................................................................................................................................................................................................................................GGCTATGCCTCATCTAGTC...........................................................................1913.0033000000
...............................................................................................................................................................CAAGATGTCGGAATAGCTGA...............................................................................................................................................................................................2013.0031000200
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGAG..............................................................................................................................................................................................2413.0030010101
............................................................................................................................................................TGGCAAGATGTCGGAATAGT..................................................................................................................................................................................................2012.0021000100
.................................................................................................................................................................AGATGTCGGAATAGCTGA...............................................................................................................................................................................................1812.0021010000
..............................................................................................................................................................GCAAGATGTCGGAATAGC..................................................................................................................................................................................................1812.0021000100
................................................................................................................................................................AAGATGTCGGAATAGCTG................................................................................................................................................................................................1812.0021000100
.............................................................................................................................................................GGCAAGATGTCGGAATAGCTGTT..............................................................................................................................................................................................2312.0022000000
...........................................................................................................................................................TTGGCAAGATGTCGGAATAGCTT................................................................................................................................................................................................2312.0021000100
..........................................................................................................................................................TTTGGCAAGATGTCGGAATAGCA.................................................................................................................................................................................................2312.0021000010
.............................................................................................................................................................GGCAAGATGTCGGAATAG...................................................................................................................................................................................................1812.0022000000
............................................................................................................................................................TGGCAAGATGTCGGAATAGCTGATTT-...........................................................................................................................................................................................2621.5030000300

Generated: 10/20/2015 at 07:38 PM