ID:

dpe-mir-307

 Coordinate:

scaffold_4:1183078-1183165 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intron

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-40.9 -40.9 -40.8

Flybase annnotation

intron [Dper\GL17329-in]; Antisense to utr5 [utr5_plus_3644]; pre_miRNA [Dper\mir-307-RM]; utr3 [utr3_minus_2591]; miRNA [Dper\miR-307-RA]

No Repeatable elements found

Sense Strand Reads

AAAAAGAACAAGTGAAAACTGAAAACTGAGAAAAAGTTCGGGTCGCATTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAGCCGGACAACAGAATAGTGATTCAATATCCCAAGTGT

***********************************************(((((((((((((((.(((((((((...((.(((((((.((((.......))))..))))))).))...)))))))))))).)))))))))))).********************************************** 		Read size # Mismatch Hit Count Total Norm Total V057

head

 V050

head

 M042

female body

 V111

male body		 V042

embryo

 M021

embryo
.........................................................................................................TCACAACCTCCTTGAGTGAGCG............................................................. 22 0 1 29090.00 29090 14990 11928 1683 466 23 0
.........................................................................................................TCACAACCTCCTTGAGTGAGC.............................................................. 21 0 1 23416.00 23416 11742 10866 363 399 43 3
.........................................................................................................TCACAACCTCCTTGAGTGAGCGA............................................................ 23 0 1 12030.00 12030 5087 4249 2175 451 67 1
.........................................................................................................TCACAACCTCCTTGAGTGAG............................................................... 20 0 1 8103.00 8103 4873 3085 33 111 1 0
.........................................................................................................TCACAACCTCCTTGAGTGAGCGT............................................................ 23 1 1 3484.00 3484 2224 1084 58 118 0 0
..........................................................................................................CACAACCTCCTTGAGTGAGCG............................................................. 21 0 1 3149.00 3149 1825 1040 220 59 1 4
..........................................................................................................CACAACCTCCTTGAGTGAGCGA............................................................ 22 0 1 2834.00 2834 1239 964 561 65 4 1
..........................................................................................................CACAACCTCCTTGAGTGAGC.............................................................. 20 0 1 1990.00 1990 1346 565 42 37 0 0
...........................................................................................................ACAACCTCCTTGAGTGAGCGA............................................................ 21 0 1 921.00 921 443 300 154 21 2 1
.........................................................................................................TCACAACCTCCTTGAGTGA................................................................ 19 0 1 638.00 638 406 218 11 2 1 0
...........................................................................................................ACAACCTCCTTGAGTGAGCG............................................................. 20 0 1 350.00 350 194 133 20 2 1 0
..........................................................................................................CACAACCTCCTTGAGTGAG............................................................... 19 0 1 322.00 322 234 85 3 0 0 0
.........................................................................................................TCACAACCTCCTTGCGTGAGCG............................................................. 22 1 1 320.00 320 183 136 0 1 0 0
.........................................................................................................TCACAACCTCCTTGAGCGAGCG............................................................. 22 1 1 297.00 297 211 86 0 0 0 0
..........................................................................................................CACAACCTCCTTGAGTGAGCGAT........................................................... 23 0 1 293.00 293 166 91 27 8 1 0
..........................................................................................................CACAACCTCCTTGAGTGAGCGT............................................................ 22 1 1 282.00 282 208 60 4 10 0 0
...........................................................................................................ACAACCTCCTTGAGTGAGC.............................................................. 19 0 1 277.00 277 150 119 6 2 0 0
..............................................................ACTCACTCAACCTGGGTGTGAT........................................................................................................ 22 0 1 271.00 271 23 32 213 2 1 0
.........................................................................................................TCACAACCTCCTTGAGCGAGC.............................................................. 21 1 1 201.00 201 132 69 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGAGCGAT........................................................... 24 0 1 188.00 188 78 73 26 9 0 2
..............................................................ACTCACTCAACCTGGGTGTGATG....................................................................................................... 23 0 1 175.00 175 25 16 134 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGAGCGC............................................................ 23 1 1 171.00 171 124 42 1 4 0 0
.........................................................................................................TCACAACCTCCTTGAGAGAGCG............................................................. 22 1 1 138.00 138 93 39 2 4 0 0
.........................................................................................................TCACAACCGCCTTGAGTGAGCG............................................................. 22 1 1 132.00 132 72 6 54 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGAGCGAA........................................................... 24 1 1 121.00 121 58 46 13 4 0 0
..............................................................ACTCACTCAACCTGGGTGTGA......................................................................................................... 21 0 1 118.00 118 25 13 80 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGATCG............................................................. 22 1 1 112.00 112 82 28 1 0 1 0
.........................................................................................................TCACAACCGCCTTGAGTGAGCGA............................................................ 23 1 1 109.00 109 30 4 75 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGAGA.............................................................. 21 1 1 108.00 108 55 49 0 4 0 0
.........................................................................................................TCACAGCCTCCTTGAGTGAGCG............................................................. 22 1 1 102.00 102 30 72 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGCGCG............................................................. 22 1 1 100.00 100 54 46 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGAGAGC.............................................................. 21 1 1 100.00 100 61 38 0 1 0 0
.........................................................................................................TCACAACCTCCTTGAGTGAGT.............................................................. 21 1 1 93.00 93 71 21 0 1 0 0
.........................................................................................................TCACAACCTCCTTGAGTGAGCGTT........................................................... 24 1 1 91.00 91 62 26 1 2 0 0
.........................................................................................................TCACAACCTCCTTGCGTGAGCGA............................................................ 23 1 1 89.00 89 52 37 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGAGCT............................................................. 22 1 1 88.00 88 58 25 3 2 0 0
.........................................................................................................TCACAGCCTCCTTGAGTGAGC.............................................................. 21 1 1 88.00 88 30 58 0 0 0 0
.........................................................................................................TCACAACCTCCTTGACTGAGC.............................................................. 21 1 1 87.00 87 70 16 0 0 1 0
.........................................................................................................TCACAACCTCCTTGCGTGAG............................................................... 20 1 1 83.00 83 47 36 0 0 0 0
...........................................................................................................ACAACCTCCTTGAGTGAG............................................................... 18 0 1 82.00 82 50 31 1 0 0 0
.........................................................................................................TCACAACCTCCTTGAGCGAGCGA............................................................ 23 1 1 78.00 78 55 21 0 1 1 0
.........................................................................................................TAACAACCTCCTTGAGTGAGCG............................................................. 22 1 1 78.00 78 64 14 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGCGAG............................................................... 20 1 1 76.00 76 53 23 0 0 0 0
.........................................................................................................TCACAACCTCCTTGGGTGAGCG............................................................. 22 1 1 76.00 76 50 24 2 0 0 0
.........................................................................................................TCACAACCTCCTTGCGTGAGC.............................................................. 21 1 1 75.00 75 44 31 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGAGCA............................................................. 22 1 1 74.00 74 38 27 6 3 0 0
.........................................................................................................TCACAACCTCCTTGAGTGATC.............................................................. 21 1 1 73.00 73 55 16 1 1 0 0
.........................................................................................................TCACAACCGCCTTGAGTGAGC.............................................................. 21 1 1 72.00 72 51 10 11 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGACCG............................................................. 22 1 1 72.00 72 51 20 1 0 0 0
.........................................................................................................TAACAACCTCCTTGAGTGAGC.............................................................. 21 1 1 71.00 71 62 9 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGGGCG............................................................. 22 1 1 70.00 70 48 21 1 0 0 0
.........................................................................................................TCACAACCTCCGTGAGTGAGC.............................................................. 21 1 1 69.00 69 56 13 0 0 0 0
..............................................................ACTCACTCAACCTGGGTGT........................................................................................................... 19 0 1 66.00 66 41 19 6 0 0 0
.........................................................................................................TCACAACCTCCTTGTGTGAGCG............................................................. 22 1 1 65.00 65 53 12 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTCAGC.............................................................. 21 1 1 65.00 65 49 15 0 1 0 0
.........................................................................................................TCACAACCTCCTTGAGTGACC.............................................................. 21 1 1 65.00 65 41 23 0 1 0 0
.........................................................................................................TCACAACCTCCGTGAGTGAGCG............................................................. 22 1 1 62.00 62 53 9 0 0 0 0
.........................................................................................................TCACAAACTCCTTGAGTGAGCG............................................................. 22 1 1 58.00 58 44 14 0 0 0 0
.........................................................................................................TCACAACCACCTTGAGTGAGCG............................................................. 22 1 1 56.00 56 21 2 33 0 0 0
.............................................................GACTCACTCAACCTGGGTGT........................................................................................................... 20 0 1 55.00 55 42 12 0 1 0 0
.........................................................................................................TCACGACCTCCTTGAGTGAGCG............................................................. 22 1 1 52.00 52 34 18 0 0 0 0
.........................................................................................................TCACAACATCCTTGAGTGAGCG............................................................. 22 1 1 51.00 51 39 12 0 0 0 0
.........................................................................................................TCACAACCTCCCTGAGTGAGC.............................................................. 21 1 1 50.00 50 34 15 0 1 0 0
.........................................................................................................TCACAACCTCCTTGAGGGAGCG............................................................. 22 1 1 49.00 49 36 13 0 0 0 0
.........................................................................................................TCACAACCTCCCTGAGTGAGCG............................................................. 22 1 1 49.00 49 33 14 0 1 1 0
...........................................................................................................ACAACCTCCTTGAGTGAGCGT............................................................ 21 1 1 46.00 46 29 16 1 0 0 0
.........................................................................................................TCACAACCTCCTCGAGTGAGCG............................................................. 22 1 1 46.00 46 31 15 0 0 0 0
.........................................................................................................TCACAACCTCCTCGAGTGAGC.............................................................. 21 1 1 45.00 45 34 11 0 0 0 0
.........................................................................................................CCACAACCTCCTTGAGTGAGCG............................................................. 22 1 1 45.00 45 32 10 2 1 0 0
..............................................................ACTCACTCAACCTGGGTGTG.......................................................................................................... 20 0 1 44.00 44 7 5 32 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGAGAG............................................................. 22 1 1 44.00 44 15 29 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGAGCC............................................................. 22 1 1 44.00 44 31 13 0 0 0 0
.........................................................................................................TCACAACCTCCTTCAGTGAGC.............................................................. 21 1 1 44.00 44 34 8 0 2 0 0
.........................................................................................................TCACAGCCTCCTTGAGTGAGCGA............................................................ 23 1 1 42.00 42 21 20 0 1 0 0
.........................................................................................................TCACAAACTCCTTGAGTGAGC.............................................................. 21 1 1 41.00 41 30 11 0 0 0 0
.........................................................................................................TCACAACCTCCTTGACTGAGCG............................................................. 22 1 1 41.00 41 29 12 0 0 0 0
.........................................................................................................TCACAACCCCCTTGAGTGAGCG............................................................. 22 1 1 40.00 40 24 7 9 0 0 0
..........................................................................................................CACAACCTCCTTGAGCGAGCG............................................................. 21 1 1 39.00 39 29 9 0 1 0 0
.........................................................................................................ACACAACCTCCTTGAGTGAGCG............................................................. 22 1 1 39.00 39 27 9 3 0 0 0
.........................................................................................................TCACAACCACCTTGAGTGAGCGA............................................................ 23 1 1 38.00 38 2 2 34 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGCGC.............................................................. 21 1 1 38.00 38 22 16 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGAGCGG............................................................ 23 1 1 38.00 38 23 12 3 0 0 0
.........................................................................................................TCACAATCTCCTTGAGTGAGCG............................................................. 22 1 1 38.00 38 26 11 0 1 0 0
.........................................................................................................TCACAACCTCCTTGCGTGAGCGT............................................................ 23 2 1 37.00 37 33 4 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGAGAG............................................................... 20 1 1 37.00 37 23 13 0 1 0 0
.........................................................................................................CCACAACCTCCTTGAGTGAGC.............................................................. 21 1 1 37.00 37 17 19 0 1 0 0
.........................................................................................................TCACAACCTCCTTGAGTGCGCGA............................................................ 23 1 1 37.00 37 24 13 0 0 0 0
.........................................................................................................TCACACCCTCCTTGAGTGAGCG............................................................. 22 1 1 36.00 36 12 24 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGTGCG............................................................. 22 1 1 36.00 36 27 9 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGAGAGCGA............................................................ 23 1 1 35.00 35 24 10 0 1 0 0
.........................................................................................................TCACAACCTCCTTGAGTTAGCG............................................................. 22 1 1 35.00 35 18 17 0 0 0 0
.........................................................................................................TCACAACCGCCTTGAGTGAG............................................................... 20 1 1 35.00 35 32 2 1 0 0 0
.........................................................................................................TCACAACATCCTTGAGTGAGC.............................................................. 21 1 1 34.00 34 29 5 0 0 0 0
.........................................................................................................TCACAACCTCATTGAGTGAGCG............................................................. 22 1 1 34.00 34 26 7 0 1 0 0
.........................................................................................................TCACAACCTCATTGAGTGAGC.............................................................. 21 1 1 34.00 34 24 10 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGGGAGC.............................................................. 21 1 1 34.00 34 27 7 0 0 0 0
.........................................................................................................ACACAACCTCCTTGAGTGAGC.............................................................. 21 1 1 34.00 34 28 4 1 1 0 0
.........................................................................................................TCGCAACCTCCTTGAGTGAGC.............................................................. 21 1 1 33.00 33 21 12 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTTAGC.............................................................. 21 1 1 33.00 33 23 10 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTAAGCG............................................................. 22 1 1 32.00 32 15 16 0 1 0 0
.........................................................................................................TCACAACCTCCTTGAGTGCG............................................................... 20 1 1 32.00 32 22 10 0 0 0 0
.........................................................................................................TCGCAACCTCCTTGAGTGAGCG............................................................. 22 1 1 32.00 32 20 9 3 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGGGC.............................................................. 21 1 1 31.00 31 18 12 0 0 1 0
.........................................................................................................TCACAACCTCCTTAAGTGAGC.............................................................. 21 1 1 31.00 31 17 14 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTCAGCG............................................................. 22 1 1 31.00 31 26 5 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGAGTG............................................................. 22 1 1 31.00 31 22 9 0 0 0 0
.........................................................................................................TCACAGCCTCCTTGAGTGAG............................................................... 20 1 1 30.00 30 10 20 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGCGAGCGT............................................................ 23 2 1 30.00 30 20 10 0 0 0 0
.........................................................................................................TCACAACCTACTTGAGTGAGCG............................................................. 22 1 1 30.00 30 16 14 0 0 0 0
..........................................................................................................CACAACCTCCTTGAGTGAGCGAA........................................................... 23 1 1 30.00 30 21 8 0 1 0 0
.........................................................................................................TCACAACCTCCTTGATTGAGCG............................................................. 22 1 1 29.00 29 21 6 0 2 0 0
.........................................................................................................TCACAACCTCCTTCAGTGAGCG............................................................. 22 1 1 29.00 29 20 9 0 0 0 0
.........................................................................................................GCACAACCTCCTTGAGTGAGC.............................................................. 21 1 1 29.00 29 19 7 3 0 0 0
.........................................................................................................TTACAACCTCCTTGAGTGAGCG............................................................. 22 1 1 29.00 29 20 9 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTAAGC.............................................................. 21 1 1 29.00 29 8 20 0 1 0 0
.........................................................................................................GCACAACCTCCTTGAGTGAGCG............................................................. 22 1 1 28.00 28 23 3 2 0 0 0
.........................................................................................................TAACAACCTCCTTGAGTGAGCGA............................................................ 23 1 1 28.00 28 21 7 0 0 0 0
.........................................................................................................TCACAACCTCCTTTAGTGAGCG............................................................. 22 1 1 28.00 28 14 10 3 1 0 0
.........................................................................................................TCACAACCTCCTTGATTGAGC.............................................................. 21 1 1 28.00 28 20 8 0 0 0 0
........................................................................................................CTCACAACCTCCTTGAGTGAGC.............................................................. 22 1 1 27.00 27 16 11 0 0 0 0
.........................................................................................................TCAAAACCTCCTTGAGTGAGC.............................................................. 21 1 1 27.00 27 24 3 0 0 0 0
.........................................................................................................CCACAACCTCCTTGAGTGAGCGA............................................................ 23 1 1 26.00 26 17 6 3 0 0 0
..........................................................................................................CACAACCTGCTTGAGTGAGCGA............................................................ 22 1 1 26.00 26 0 0 26 0 0 0
..........................................................................................................CACAACCTCCTTGAGCGAGC.............................................................. 20 1 1 26.00 26 25 1 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTCAG............................................................... 20 1 1 26.00 26 20 6 0 0 0 0
.........................................................................................................TCACAACCCCCTTGAGTGAGCGA............................................................ 23 1 1 26.00 26 7 4 15 0 0 0
.........................................................................................................TCACAACCTCCTTGACTGAG............................................................... 20 1 1 26.00 26 23 3 0 0 0 0
.........................................................................................................TCACAACCTCCTTGGGTGAGC.............................................................. 21 1 1 26.00 26 11 15 0 0 0 0
.........................................................................................................TCACAACCTCTTTGAGTGAGC.............................................................. 21 1 1 25.00 25 9 16 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGCGACCG............................................................. 22 2 1 25.00 25 18 7 0 0 0 0
.........................................................................................................TCACAACCTCCTTAAGTGAGCG............................................................. 22 1 1 25.00 25 14 11 0 0 0 0
.........................................................................................................CCACAACCTCCTTGAGTGAG............................................................... 20 1 1 25.00 25 19 6 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGAGCGAAA.......................................................... 25 1 1 24.00 24 15 6 0 3 0 0
.........................................................................................................TCACGACCTCCTTGAGTGAGC.............................................................. 21 1 1 24.00 24 13 11 0 0 0 0
.........................................................................................................TCAAAACCTCCTTGAGTGAGCG............................................................. 22 1 1 24.00 24 16 8 0 0 0 0
.........................................................................................................TCACAAACTCCTTGAGTGAG............................................................... 20 1 1 23.00 23 19 4 0 0 0 0
.........................................................................................................TCACAACCTCCTTGGGTGAGCGA............................................................ 23 1 1 23.00 23 19 4 0 0 0 0
.........................................................................................................TCACAATCTCCTTGAGTGAGC.............................................................. 21 1 1 23.00 23 12 10 1 0 0 0
.........................................................................................................TCACAACCTCCGTGAGTGAG............................................................... 20 1 1 23.00 23 21 2 0 0 0 0
..........................................................................................................CACAACCTCCTTGAGTGAGCGC............................................................ 22 1 1 23.00 23 18 5 0 0 0 0
.........................................................................................................TCACAACATCCTTGAGTGAGCGA............................................................ 23 1 1 22.00 22 12 9 1 0 0 0
..........................................................................................................TACAACCTCCTTGAGTGAGCG............................................................. 21 1 1 22.00 22 21 1 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGGGAGCGA............................................................ 23 1 1 22.00 22 18 1 2 1 0 0
.........................................................................................................TCACATCCTCCTTGAGTGAGCG............................................................. 22 1 1 22.00 22 3 19 0 0 0 0
.........................................................................................................TCATAACCTCCTTGAGTGAGC.............................................................. 21 1 1 22.00 22 11 11 0 0 0 0
..........................................................................................................CACAACCTCCTTGCGTGAGCG............................................................. 21 1 1 22.00 22 19 3 0 0 0 0
.........................................................................................................TCACAACCTCCGTGAGTGAGCGA............................................................ 23 1 1 22.00 22 19 3 0 0 0 0
..........................................................................................................AACAACCTCCTTGAGTGAGCGA............................................................ 22 1 1 21.00 21 16 4 1 0 0 0
.........................................................................................................TTACAACCTCCTTGAGTGAGC.............................................................. 21 1 1 21.00 21 15 6 0 0 0 0
.........................................................................................................TCACATCCTCCTTGAGTGAGC.............................................................. 21 1 1 21.00 21 2 19 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGGG............................................................... 20 1 1 21.00 21 16 5 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGGGCGA............................................................ 23 1 1 21.00 21 11 7 2 1 0 0
.........................................................................................................TCACAACCTCCTTGTGTGAGCGA............................................................ 23 1 1 21.00 21 16 5 0 0 0 0
..........................................................................................................CACAACCTCCTTGAGCGAGCGA............................................................ 22 1 1 21.00 21 18 2 0 1 0 0
.........................................................................................................TAACAACCTCCTTGAGTGAG............................................................... 20 1 1 21.00 21 19 2 0 0 0 0
..........................................................................................................CACAACCTCCTTGAGTGCGCG............................................................. 21 1 1 21.00 21 9 12 0 0 0 0
.........................................................................................................TCACAACCCCCTTGAGTGAGC.............................................................. 21 1 1 21.00 21 16 4 1 0 0 0
.........................................................................................................TCACAACCACCTTGAGTGAGC.............................................................. 21 1 1 21.00 21 14 3 4 0 0 0
.........................................................................................................TCACACCCTCCTTGAGTGAGC.............................................................. 21 1 1 21.00 21 7 14 0 0 0 0
.........................................................................................................TCACAACCTCCCTGAGTGAG............................................................... 20 1 1 20.00 20 13 7 0 0 0 0
.........................................................................................................TCACAACCTCCTGGAGTGAGC.............................................................. 21 1 1 20.00 20 15 4 0 0 0 1
..........................................................................................................CACAACCTCCTTGCGTGAGCGA............................................................ 22 1 1 20.00 20 14 6 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTTAG............................................................... 20 1 1 20.00 20 16 4 0 0 0 0
..........................................................................................................AACAACCTCCTTGAGTGAGCG............................................................. 21 1 1 20.00 20 15 5 0 0 0 0
.........................................................................................................TCACAACGTCCTTGAGTGAGCG............................................................. 22 1 1 20.00 20 16 4 0 0 0 0
.........................................................................................................TCGCAACCTCCTTGAGTGAGCGA............................................................ 23 1 1 20.00 20 14 5 1 0 0 0
.........................................................................................................TCACAACCTCCTTGCGCGAGCG............................................................. 22 2 1 20.00 20 16 4 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGGGAG............................................................... 20 1 1 20.00 20 19 0 0 1 0 0
.........................................................................................................TCACAAGCTCCTTGAGTGAGCG............................................................. 22 1 1 19.00 19 17 1 0 0 1 0
.........................................................................................................TCACAACCTCATTGAGTGAGCGA............................................................ 23 1 1 19.00 19 15 3 0 1 0 0
.........................................................................................................TCACAACCTCCTTGAGTGAGCTA............................................................ 23 1 1 19.00 19 9 7 3 0 0 0
.........................................................................................................TCACAACCTCTTTGAGTGAGCG............................................................. 22 1 1 19.00 19 11 8 0 0 0 0
...........................................................................................................ACAACCTCCTTGAGTGAGCGAT........................................................... 22 0 1 19.00 19 9 5 4 0 0 1
..............................................................ACTCACTCAACCTGGGTGTGT......................................................................................................... 21 1 1 19.00 19 10 6 3 0 0 0
..........................................................................................................TACAACCTCCTTGAGTGAGCGA............................................................ 22 1 1 19.00 19 15 4 0 0 0 0
.........................................................................................................TCACAACCTCCTTCAGCGAGC.............................................................. 21 2 1 18.00 18 14 4 0 0 0 0
.........................................................................................................TCACAACCTCCTGGAGTGAGCG............................................................. 22 1 1 18.00 18 13 5 0 0 0 0
.........................................................................................................TCACAACCTTCTTGAGTGAGCG............................................................. 22 1 1 18.00 18 12 6 0 0 0 0
.........................................................................................................TCACAACCTCCTTGTGTGAG............................................................... 20 1 1 18.00 18 14 4 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGAACG............................................................. 22 1 1 18.00 18 6 12 0 0 0 0
.........................................................................................................TCACAACGTCCTTGAGTGAGC.............................................................. 21 1 1 18.00 18 16 2 0 0 0 0
.........................................................................................................TCACAACCTCCTTTAGTGAGC.............................................................. 21 1 1 18.00 18 14 3 0 0 1 0
.........................................................................................................TCACAACCTCCTTGAGTGACCGA............................................................ 23 1 1 18.00 18 14 4 0 0 0 0
.........................................................................................................TCACAACCTCCTTGCGTGCGCG............................................................. 22 2 1 17.00 17 12 5 0 0 0 0
.........................................................................................................GCACAACCTCCTTGAGTGAGCGA............................................................ 23 1 1 17.00 17 9 2 6 0 0 0
.........................................................................................................TCACAACCTCCTTGACTGAGCGA............................................................ 23 1 1 17.00 17 13 4 0 0 0 0
.........................................................................................................ACACAACCTCCTTGAGTGAGCGA............................................................ 23 1 1 17.00 17 13 1 3 0 0 0
.........................................................................................................TCACAACCTCCTTGAATGAGCG............................................................. 22 1 1 17.00 17 8 9 0 0 0 0
.........................................................................................................TCACAACCGCCTTGAGAGAGCG............................................................. 22 2 1 17.00 17 14 3 0 0 0 0
........................................................................................................CTCACAACCTCCTTGAGTGAGCG............................................................. 23 1 1 17.00 17 9 7 1 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGAGCGAC........................................................... 24 1 1 17.00 17 8 3 2 0 0 4
.........................................................................................................TCACAACCTCCTTGAGTGAGCGAG........................................................... 24 1 1 17.00 17 9 5 2 1 0 0
.........................................................................................................TCACAACCTCCTTGAGTGAGCAA............................................................ 23 1 1 17.00 17 8 7 2 0 0 0
.........................................................................................................TCACAACCTCCTTGTGTGAGC.............................................................. 21 1 1 17.00 17 10 6 1 0 0 0
..........................................................................................................AACAACCTCCTTGAGTGAGC.............................................................. 20 1 1 16.00 16 13 3 0 0 0 0
..........................................................................................................CACAACCTCCTTGAGTCAGC.............................................................. 20 1 1 16.00 16 12 4 0 0 0 0
.........................................................................................................TCACAACCTCATTGAGTGAG............................................................... 20 1 1 16.00 16 15 1 0 0 0 0
.........................................................................................................TCACCACCTCCTTGAGTGAGCG............................................................. 22 1 1 16.00 16 13 3 0 0 0 0
.........................................................................................................TCACAACCTCCGTGAGAGAGCG............................................................. 22 2 1 16.00 16 14 2 0 0 0 0
..........................................................................................................CACAACCGCCTTGAGTGAGCG............................................................. 21 1 1 16.00 16 15 1 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGAGTGA............................................................ 23 1 1 15.00 15 9 4 1 1 0 0
.........................................................................................................TCACAACATCCTTGAGTGAG............................................................... 20 1 1 15.00 15 11 4 0 0 0 0
.........................................................................................................TCACAGCCTCCTTGAGTGAGCGT............................................................ 23 2 1 15.00 15 6 8 1 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGTGC.............................................................. 21 1 1 15.00 15 12 3 0 0 0 0
..........................................................................................................CACAGCCTCCTTGAGTGAGCG............................................................. 21 1 1 15.00 15 11 2 0 2 0 0
.........................................................................................................TAACAACCTCCGTGAGTGAGCG............................................................. 22 2 1 15.00 15 12 3 0 0 0 0
.........................................................................................................TCACAACCGCCTTGAGTGAGCGT............................................................ 23 2 1 15.00 15 14 1 0 0 0 0
.........................................................................................................TCACAACCTCCTTAAGTGAG............................................................... 20 1 1 14.00 14 8 6 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGAGAGA............................................................ 23 1 1 14.00 14 3 11 0 0 0 0
.........................................................................................................TCACAACCTCCTTCAGCGAGCG............................................................. 22 2 1 14.00 14 12 2 0 0 0 0
.........................................................................................................TCACAACCTACTTGAGTGAGC.............................................................. 21 1 1 14.00 14 9 5 0 0 0 0
.........................................................................................................TCATAACCTCCTTGAGTGAGCG............................................................. 22 1 1 14.00 14 9 4 0 1 0 0
.........................................................................................................TCACAACCGCCTTGAGAGAGC.............................................................. 21 2 1 14.00 14 11 3 0 0 0 0
.........................................................................................................TCACAACCTCCTTGCGTGATCG............................................................. 22 2 1 14.00 14 9 5 0 0 0 0
..........................................................................................................CACAGCCTCCTTGAGTGAGCGA............................................................ 22 1 1 14.00 14 9 4 1 0 0 0
..........................................................................................................CACAACCTCCTTGAGTGAGCGATT.......................................................... 24 1 1 14.00 14 8 3 2 1 0 0
.........................................................................................................TCACAACCTCCTTGAGTGGGCGT............................................................ 23 2 1 14.00 14 11 3 0 0 0 0
.........................................................................................................TCACAACCTGCTTGAGTGAGCG............................................................. 22 1 1 14.00 14 11 3 0 0 0 0
.........................................................................................................TCACGACCTCCTTGAGTGAG............................................................... 20 1 1 14.00 14 9 5 0 0 0 0
..........................................................................................................CAAAACCTCCTTGAGTGAGCG............................................................. 21 1 1 14.00 14 13 1 0 0 0 0
.........................................................................................................TCACAACCTCCTTCAGTGAG............................................................... 20 1 1 14.00 14 11 3 0 0 0 0
.........................................................................................................TCACAAGCTCCTTGAGTGAGC.............................................................. 21 1 1 14.00 14 14 0 0 0 0 0
.........................................................................................................TCACAACCTCCTTGGGTGAG............................................................... 20 1 1 14.00 14 12 2 0 0 0 0
.........................................................................................................TCACAACCTCCTTCAGTGAGCGA............................................................ 23 1 1 14.00 14 10 4 0 0 0 0
.........................................................................................................TCACAACCTCCTCGAGTGAGCGA............................................................ 23 1 1 14.00 14 7 6 1 0 0 0
.........................................................................................................TCACAACGTCCTTGAGTGAGCGT............................................................ 23 2 1 14.00 14 13 1 0 0 0 0
..........................................................................................................CACAACCTCCTTGAGAGAGCG............................................................. 21 1 1 14.00 14 10 4 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGAT............................................................... 20 1 1 13.00 13 10 3 0 0 0 0
.........................................................................................................TCACAATCTCCTTGAGTGAGCGA............................................................ 23 1 1 13.00 13 9 3 0 1 0 0
.........................................................................................................TCACAACCTCCTTGAGAGAGCGT............................................................ 23 2 1 13.00 13 11 2 0 0 0 0
.........................................................................................................ACACAACCTCCTTGAGTGAG............................................................... 20 1 1 13.00 13 11 2 0 0 0 0
.........................................................................................................TCGCAACCTCCTTGAGTGAG............................................................... 20 1 1 13.00 13 9 4 0 0 0 0
.........................................................................................................TCACAACCGCCTTGAGGGAGC.............................................................. 21 2 1 13.00 13 12 1 0 0 0 0
.........................................................................................................TCAAAACCTCCTTGAGTGAGCGA............................................................ 23 1 1 13.00 13 8 4 0 1 0 0
...............................................................CTCACTCAACCTGGGTGTGAT........................................................................................................ 21 0 1 13.00 13 0 0 13 0 0 0
.........................................................................................................TCACAACCTCCGTGAGTGAGCGT............................................................ 23 2 1 13.00 13 10 3 0 0 0 0
.........................................................................................................TAACAACCTCCTTGAGTGAGCGT............................................................ 23 2 1 13.00 13 12 1 0 0 0 0
.........................................................................................................TCACAACCTCCTTAAGTGAGCGA............................................................ 23 1 1 13.00 13 6 7 0 0 0 0
.........................................................................................................TCACAACCTCCCTGAGTGAGCGA............................................................ 23 1 1 13.00 13 7 5 0 1 0 0
.........................................................................................................TCACAATCTCCTTGAGTGAG............................................................... 20 1 1 12.00 12 10 2 0 0 0 0
.........................................................................................................TCACAACTTCCTTGAGTGAGC.............................................................. 21 1 1 12.00 12 6 6 0 0 0 0
.........................................................................................................TGACAACCTCCTTGAGTGAGCG............................................................. 22 1 1 12.00 12 12 0 0 0 0 0
..........................................................................................................CACAACCTCCTTGAGTCAGCG............................................................. 21 1 1 12.00 12 12 0 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGCGCGT............................................................ 23 2 1 12.00 12 8 4 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTAAG............................................................... 20 1 1 12.00 12 6 6 0 0 0 0
.........................................................................................................TCAGAACCTCCTTGAGTGAGCG............................................................. 22 1 1 12.00 12 12 0 0 0 0 0
.........................................................................................................TCACAACCTCATTGAGAGAGCG............................................................. 22 2 1 12.00 12 9 3 0 0 0 0
..........................................................................................................CACAACCTACTTGAGTGAGCGA............................................................ 22 1 1 12.00 12 2 2 7 0 1 0
............................................................................................................CAACCTCCTTGAGTGAGCGA............................................................ 20 0 1 12.00 12 0 2 10 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGATCGA............................................................ 23 1 1 12.00 12 6 6 0 0 0 0
.........................................................................................................TCACAACCTACTTGAGTGAGCGA............................................................ 23 1 1 12.00 12 9 3 0 0 0 0
.........................................................................................................TCACAACTTCCTTGAGTGAGCG............................................................. 22 1 1 12.00 12 5 7 0 0 0 0
.........................................................................................................TCACATCCTCCTTGAGTGAGCGA............................................................ 23 1 1 12.00 12 0 12 0 0 0 0
.........................................................................................................TCACAACCTCCGTGAGCGAGC.............................................................. 21 2 1 12.00 12 11 1 0 0 0 0
.........................................................................................................TCACAAACTCCTTGAGTGAGCGA............................................................ 23 1 1 11.00 11 8 3 0 0 0 0
.........................................................................................................TCACAACCTCCTTAACTGAGC.............................................................. 21 2 1 11.00 11 4 7 0 0 0 0
.........................................................................................................TCACAACCTTCTTGAGTGAGC.............................................................. 21 1 1 11.00 11 7 4 0 0 0 0
.........................................................................................................TCTCAACCTCCTTGAGTGAGC.............................................................. 21 1 1 11.00 11 5 6 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGATCT............................................................. 22 2 1 11.00 11 8 3 0 0 0 0
.........................................................................................................TCACGACCTCCTTGAGTGAGCGA............................................................ 23 1 1 11.00 11 8 3 0 0 0 0
.........................................................................................................TAACAACCTCCTTGAGAGAGCG............................................................. 22 2 1 11.00 11 6 5 0 0 0 0
..........................................................................................................CACAACCGCCTTGAGTGAGC.............................................................. 20 1 1 11.00 11 9 2 0 0 0 0
..........................................................................................................CACAACCTACTTGAGTGAGCG............................................................. 21 1 1 11.00 11 5 2 4 0 0 0
..........................................................................................................CACAACCTCCTTGAGTGAGCGCT........................................................... 23 1 1 11.00 11 7 4 0 0 0 0
.........................................................................................................TCACAACCTCCTTGGGTGAGCGT............................................................ 23 2 1 11.00 11 11 0 0 0 0 0
........................................................................................................CTCACAACCTCCTTGAGTGAGCGA............................................................ 24 1 1 11.00 11 5 2 4 0 0 0
.........................................................................................................TAACAAACTCCTTGAGTGAGCG............................................................. 22 2 1 11.00 11 10 1 0 0 0 0
.........................................................................................................TCACAACCTCCTTGTGTGAGCGT............................................................ 23 2 1 11.00 11 10 1 0 0 0 0
..........................................................................................................CACAACATCCTTGAGTGAGCG............................................................. 21 1 1 11.00 11 9 2 0 0 0 0
.........................................................................................................TCACAACCTCCTAGAGTGAGC.............................................................. 21 1 1 11.00 11 7 4 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGAAC.............................................................. 21 1 1 11.00 11 5 6 0 0 0 0
.........................................................................................................TCACAACTTCCTTGAGTGAGCGA............................................................ 23 1 1 11.00 11 7 3 0 0 1 0
.........................................................................................................TAACAACCTCCTTGTGTGAGCG............................................................. 22 2 1 10.00 10 7 3 0 0 0 0
.........................................................................................................TCACAACCTCCTTGATTGAG............................................................... 20 1 1 10.00 10 8 2 0 0 0 0
..........................................................................................................CACAACCTCCTTGCGTGAGC.............................................................. 20 1 1 10.00 10 9 1 0 0 0 0
.........................................................................................................TCAGAACCTCCTTGAGTGAGC.............................................................. 21 1 1 10.00 10 10 0 0 0 0 0
........................................................................................................CTCACAACCTCCTTGAGTGAG............................................................... 21 1 1 10.00 10 7 3 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTAAGCGA............................................................ 23 1 1 10.00 10 3 6 1 0 0 0
.........................................................................................................TTACAACCTCCTTGAGTGAGCGA............................................................ 23 1 1 10.00 10 8 2 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGAGTGT............................................................ 23 2 1 10.00 10 8 2 0 0 0 0
.........................................................................................................TCACAACCTCCGTGAGCGAGCG............................................................. 22 2 1 10.00 10 6 4 0 0 0 0
.........................................................................................................TCACAACCTCCTTGACTGAGCGT............................................................ 23 2 1 10.00 10 9 1 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGTGCGA............................................................ 23 1 1 10.00 10 8 0 1 1 0 0
..........................................................................................................CACAACCTCCTTGAGTGACCG............................................................. 21 1 1 10.00 10 7 3 0 0 0 0
..........................................................................................................CACAACCTCCTTGAGTGATCG............................................................. 21 1 1 10.00 10 9 1 0 0 0 0
.........................................................................................................TCACAACCTCCTTGACTGATC.............................................................. 21 2 1 10.00 10 8 2 0 0 0 0
..........................................................................................................CACAACCTCCCTGAGTGAGCGA............................................................ 22 1 1 10.00 10 7 2 1 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGTGCGT............................................................ 23 2 1 10.00 10 9 1 0 0 0 0
.....................................................................................TTATTTCGATATGGTATCCA................................................................................... 20 0 1 10.00 10 2 1 6 0 1 0
..........................................................................................................TACAACCTCCTTGAGTGAGC.............................................................. 20 1 1 10.00 10 10 0 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGAC............................................................... 20 1 1 10.00 10 7 3 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGCGACC.............................................................. 21 2 1 10.00 10 7 3 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGTGTG............................................................... 20 1 1 10.00 10 9 1 0 0 0 0
.........................................................................................................TCACAAACTCCTTGAGTGAGCGT............................................................ 23 2 1 10.00 10 10 0 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAATGAGC.............................................................. 21 1 1 10.00 10 7 3 0 0 0 0
.........................................................................................................TCCCAACCTCCTTGAGTGAGCG............................................................. 22 1 1 10.00 10 8 2 0 0 0 0
..........................................................................................................CACAACCTCCTTGAGGGAGCG............................................................. 21 1 1 10.00 10 9 0 1 0 0 0
.........................................................................................................TCACAACCTCATTGAGTGAGCGT............................................................ 23 2 1 10.00 10 8 2 0 0 0 0
.........................................................................................................TCACAACCTCCTTGAGCGAGCGC............................................................ 23 2 1 10.00 10 7 3 0 0 0 0
.........................................................................................................TCACAACCTCTTTGAGTGAGCGA............................................................ 23 1 1 10.00 10 4 4 1 1 0 0
.........................................................................................................TCACAACCTCCTTGAGTGAGCTT............................................................ 23 2 1 10.00 10 10 0 0 0 0 0

Anti-sense strand reads

TTTTTCTTGTTCACTTTTGACTTTTGACTCTTTTTCAAGCCCAGCGTAAAACAGAACGAAACTGAGTGAGTTGGACCCACACTACAATAAAGCTATACCATAGGTAGTGTTGGAGGAACTCACTCGCTATCGTCCTATCTTATAGGTGTTTCGGCCTGTTGTCTTATCACTAAGTTATAGGGTTCACA

**********************************************(((((((((((((((.(((((((((...((.(((((((.((((.......))))..))))))).))...)))))))))))).)))))))))))).*********************************************** 		Read size # Mismatch Hit Count Total Norm Total V057

head

 V050

head

 M042

female body

 V042

embryo
.............................................................CTGAGTGCATTGGTCCCACACT......................................................................................................... 22 3 1 1.00 1 0 1 0 0
...............................................................GAGTGAGTTGGACCCACACTA........................................................................................................ 21 0 1 1.00 1 1 0 0 0
.......................................................................................................GTAGTGTTGGAGGAACTCACT................................................................ 21 0 1 1.00 1 1 0 0 0
...............................................................GAGTGAGTTGGTCCAACACT......................................................................................................... 20 2 3 0.33 1 1 0 0 0
.............................................................GTGAGTGAGTTGCTCCCACACT......................................................................................................... 22 3 3 0.33 1 1 0 0 0
........................................................................................................TAGTGTTGGAGTACCACACT................................................................ 20 3 3 0.33 1 1 0 0 0
...............................................................AAGTGAGTTCGCCCCACACT......................................................................................................... 20 3 3 0.33 1 0 1 0 0
...............................................................GAGTGAGTTGGTCCAAGACT......................................................................................................... 20 3 4 0.25 1 1 0 0 0
...............................................................GAGTGATTTCGACCAACACT......................................................................................................... 20 3 5 0.20 1 1 0 0 0
.......................................CCCAGCGTTAGACAGAATG.................................................................................................................................. 19 3 7 0.14 1 0 0 0 1
..........................................................................................................GTGATGGAGGAACTTAATC............................................................... 19 3 8 0.13 1 0 0 1 0
............................................................................................................................................TATAAGTGTTTCGGCCTTT............................. 19 2 10 0.10 1 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droPer2 scaffold_4:1183028-1183215 + dpe-mir-307 Known_mirbase AAAAAGAAC------AAGTG---------------AAAAC------------------------------TGAAAACTGAGAAAAA-GTT-CGGGTCGCA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAGCC---GGACAACA------------------G---AATAGTGATTCAATATCCCAA---------------GTGT--------
dp5 3:14135653-14135839 - dps-mir-307a Known_mirbase AAAAAGAAC------AAGTG---------------AAAAC------------------------------TGAAAACTGAGAAAAA-GTT-CGGGTCGCA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAGCC---GGACAAAA------------------G---AATAGTGATTCAATATC-CAA---------------GCGT--------
droWil2 scf2_1100000004514:3433639-3433811 - dwi-mir-307 Known_mirbase AA--------------AGTG---------------TATCC-AATTTGAAATCATCTGAATAAACCAAATTA-----------TAG-AACTTA--A-CACA-TTTTGCCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTATAATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAGTTCAATGAA---A------------------G---A-----------------------------------------------
droVir3 scaffold_12875:5789440-5789591 - dvi-mir-307 Known_mirbase GTTAAAGTTACGAAAAAGTGCAAAAGTGACAAAATAAACC-G------------------------------------------------------AACA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTAGTT-CGATTTGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAGTATCCACTAAGCC---------------------------------------------------------------------------------
droMoj3 scaffold_6496:24271645-24271794 + dmo-mir-307 Known_mirbase AATAA----------AAATA---------------AAAAC-AACA-------------------------A-----------GAAA-ACT-A----AGAA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATTCGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAGCTAAAC-----CAATAG------------------A-----------------------------------------------
droGri2 scaffold_15112:722930-723080 - dgr-mir-307 Known_mirbase GAAAAAATT------AAATA---------------AAA----ATA-------------------------A-----------AAG-AACT-A----AACA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATTTGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAGAA-AACAGGCGACAG---------------------------------------------------------------------
droAna3 scaffold_13266:12795467-12795609 - dan-mir-307 Known_mirbase AC--------------AGTG---------------AACCCCAATCCGAAACG-------------------------------AAA-GTT-A--GCAGCCTTTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACAAGAC----------------------------------------------------------------------------------
droBip1 scf7180000396730:1128103-1128242 + -----------------GTG---------------GACCCCAATCCGAAACG-------------------------------AAA-GTT-A--GCCGCCTTTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACAAGAC----------------------------------------------------------------------------------
droKik1 scf7180000302476:911406-911553 - ------------------TG---------------AAACC-GGAA-------------------------------------CAGA-GTT-A--GCCGCA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAACTAACTG-----------------------------------------------------------------TGCAACAAATG
droFic1 scf7180000453858:1204351-1204504 + AAA------------AAGTG---------------AAATC-GGTG-------------------------------------CCGGGGCT-A--G-AGCA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTACCCACGGATCTAGCCAAGTCG-G-----------------TCA---------------------------------------GT--------
droEle1 scf7180000491107:1596285-1596442 + AA-------------AAGTG---------------AAACC-GATG-------------------------------------CAAA-GTT-A--GCAGCA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACAAATCTAACTGACACGTATGAAAC-----TTA-------------------------------------------------------
droRho1 scf7180000777217:399406-399579 - AA-------------AAGTG---------------AAACC-CATG-------------------------------------CAAA-GTT-A--GCAGCA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAACTAACTGGCAACCATCGAAA-----TTA-------------------------------TCGAAAAAATAAGAAG--------
droBia1 scf7180000301506:1211759-1211914 + AAA------------AAGTG---------------AAACC-GATG-------------------------------------CAAA-GTT-A--GCAGCC-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAACTAACTGACATG----------------T--TAAAA-------------------------------------AT--------
droTak1 scf7180000415866:192872-193008 + AAA------------AAGTG---------------AAACC-GATG-------------------------------------CAAA-GTT-A--GCATCA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC----------------------------------------------------------------------------------
droEug1 scf7180000409209:654039-654218 + AAA------------AAGTG---------------AAACC-GATG-------------------------------------CAAA-GTT-A--GCAGCA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAACTAACTTG--------GAAA-----TTA---GAAAAATATTAATTAAAT--T--GT-----------ATTAGTAA--------
dm3 chr2R:5508711-5508877 - dme-mir-307a Known_mirbase AAA------------AAGTG---------------AAACC-GATG-------------------------------------CAAA-GTT-A--GCAGCA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAACTAACTGGCACCAGTGAAATACATG---TAATAA-------------------------------------------------
droSim2 2r:6294356-6294540 - dsi-mir-307 Known_mirbase AAA------------AAGTA---------------AAACC-GATG-------------------------------------CAAA-GTT-A--GCAGCA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACAAAGCTAACAGGCACCAGTGAAATA-------TAATAAAAATATTAA--CAATATT--AT---------------GTGT--------
droSec2 scaffold_1:3126013-3126177 - dse-mir-307 Known_mirbase AAA------------AAGTG---------------AAACC-GATG-------------------------------------CAAA-GTT-A--GCAGCA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAGCTAACTGGCACCAGTGTAATA-------CAATAAAA-----------------------------------------------
droYak3 2L:18140603-18140767 - dya-mir-307 Known_mirbase AAA------------AAGTG---------------AAACC-GATG-------------------------------------CAAA-GTT-A--GCAGCA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAACTAACTGGCACCAGTGAGTTA-------TAATAAAA-----------------------------------------------
droEre2 scaffold_4929:8848849-8849024 + der-mir-307 Known_mirbase AAAA-----------AAGTG---------------AAGCC-GATG-------------------------------------CAAA-GTT-A--GCAGCA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAACTAACTAC-------------------------AAA-----------ATATCACAAAAAGTGAAGAGATACGTAC--------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
AAAAAGAAC------AAGTG---------------AAAAC------------------------------TGAAAACTGAGAAAAA-GTT-CGGGTCGCA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAGCC---GGACAACA------------------G---AATAGTGATTCAATATCCCAA---------------GTGT--------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCG............................................................................................................22129090.002909001683231192814990466
................................................................................................................................................................TCACAACCTCCTTGAGTGAGC.............................................................................................................21123416.00234163363431086611742399
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGA...........................................................................................................23112030.0012030121756742495087451
................................................................................................................................................................TCACAACCTCCTTGAGTGAG..............................................................................................................2018103.008103033130854873111
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGT...........................................................................................................2313484.003484058010842224118
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCG............................................................................................................2113149.003149422011040182559
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGA...........................................................................................................2212834.00283415614964123965
.................................................................................................................................................................CACAACCTCCTTGAGTGAGC.............................................................................................................2011990.0019900420565134637
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGA...........................................................................................................211921.009211154230044321
................................................................................................................................................................TCACAACCTCCTTGAGTGA...............................................................................................................191638.0063801112184062
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCG............................................................................................................201350.0035002011331942
.................................................................................................................................................................CACAACCTCCTTGAGTGAG..............................................................................................................191322.00322030852340
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAT..........................................................................................................231293.002930271911668
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGT...........................................................................................................221282.002820406020810
..................................................................................................................................................................ACAACCTCCTTGAGTGAGC.............................................................................................................191277.002770601191502
....................................................................................................................ACTCACTCAACCTGGGTGTGAT........................................................................................................................................................221271.002710213132232
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAT..........................................................................................................241188.00188226073789
....................................................................................................................ACTCACTCAACCTGGGTGTGATG.......................................................................................................................................................231175.001750134016250
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGC...........................................................................................................231171.00171010421244
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAA..........................................................................................................241121.00121013046584
....................................................................................................................ACTCACTCAACCTGGGTGTGA.........................................................................................................................................................211118.00118080013250
................................................................................................................................................................TCACAACCTCCTTGAGTGAGA.............................................................................................................211108.0010800049554
................................................................................................................................................................TCACAACCTCCTTGAGTGAGT.............................................................................................................21193.009300021711
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCT............................................................................................................22188.008803025582
..................................................................................................................................................................ACAACCTCCTTGAGTGAG..............................................................................................................18182.008201031500
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCA............................................................................................................22174.007406027383
....................................................................................................................ACTCACTCAACCTGGGTGT...........................................................................................................................................................19166.006606019410
...................................................................................................................GACTCACTCAACCTGGGTGT...........................................................................................................................................................20155.005500012421
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGT...........................................................................................................21146.004601016290
....................................................................................................................ACTCACTCAACCTGGGTGTG..........................................................................................................................................................20144.00440320570
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCC............................................................................................................22144.004400013310
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGG...........................................................................................................23138.003803012230
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAA..........................................................................................................23130.00300008211
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGC...........................................................................................................22123.00230005180
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGAT..........................................................................................................22119.0019140590
....................................................................................................................ACTCACTCAACCTGGGTGTGT.........................................................................................................................................................21119.00190306100
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAC..........................................................................................................24117.0017420380
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAG..........................................................................................................24117.0017020591
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGATT.........................................................................................................24114.0014020381
................................................................................................................................................................TCACAACCTCCTTGAGTGAT..............................................................................................................20113.00130003100
.....................................................................................................................CTCACTCAACCTGGGTGTGAT........................................................................................................................................................21113.00130130000
...................................................................................................................................................................CAACCTCCTTGAGTGAGCGA...........................................................................................................20112.00120100200
...........................................................................................................................................TTATTT-CGATATGGTATCCA..................................................................................................................................20110.0010061120
................................................................................................................................................................TCACAACCTCCTTGAGTGAC..............................................................................................................20110.0010000370
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCTT...........................................................................................................23110.00100000100
dp5
AAAAAGAAC------AAGTG---------------AAAAC------------------------------TGAAAACTGAGAAAAA-GTT-CGGGTCGCA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAGCC---GGACAAAA------------------G---AATAGTGATTCAATATC-CAA---------------GCGT--------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
................................................................................................................................................................TCACAACCTCCTTGAGTGAGC.............................................................................................................21133147.0033147225181241633912413551481017
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCG............................................................................................................22127007.002700718965463227621406860302015
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGA...........................................................................................................23117946.00179461978823517611935505367111570
................................................................................................................................................................TCACAACCTCCTTGAGTGAG..............................................................................................................2015629.005629049435695447282022
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGA...........................................................................................................2213734.0037340200636520181078523714
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGT...........................................................................................................2313434.00343403571216040139071000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCG............................................................................................................2112754.0027542107353640124562003
.................................................................................................................................................................CACAACCTCCTTGAGTGAGC.............................................................................................................2012061.00206103276817286841000
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGA...........................................................................................................2111043.0010430513161011338215003
....................................................................................................................ACTCACTCAACCTGGGTGTGAT........................................................................................................................................................221880.008800327234855350005
....................................................................................................................ACTCACTCAACCTGGGTGTGATG.......................................................................................................................................................231865.008650625321777201003
....................................................................................................................ACTCACTCAACCTGGGTGTGA.........................................................................................................................................................211424.00424028931141150011
................................................................................................................................................................TCACAACCTCCTTGAGTGA...............................................................................................................191412.0041204903333260001
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCG............................................................................................................201336.00336011611211997000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAT..........................................................................................................231335.003350116148941066000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGC...........................................................................................................231303.003030802301622000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGT...........................................................................................................221262.00262052111018513000
..................................................................................................................................................................ACAACCTCCTTGAGTGAGC.............................................................................................................191239.0023902417321381000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAT..........................................................................................................241223.00223191115834910000
.................................................................................................................................................................CACAACCTCCTTGAGTGAG..............................................................................................................191219.0021905413501290000
....................................................................................................................ACTCACTCAACCTGGGTGTG..........................................................................................................................................................201205.002051127273020000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAA..........................................................................................................241123.00123061280447001
....................................................................................................................ACTCACTCAACCTGGGTGT...........................................................................................................................................................19184.00840250100490000
....................................................................................................................ACTCACTCAACCTGGGTGTGAC........................................................................................................................................................22177.0077001166000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCT............................................................................................................22174.00740120310292000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCA............................................................................................................22169.00690130140420000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGT.............................................................................................................21156.0056010170371000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGA.............................................................................................................21156.005611081450000
....................................................................................................................ACTCACTCAACCTGGGTGTGATT.......................................................................................................................................................23153.0053041012000000
...................................................................................................................................................................CAACCTCCTTGAGTGAGCGA...........................................................................................................20141.004103204040001
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCC............................................................................................................22136.0036023200110000
..................................................................................................................................................................ACAACCTCCTTGAGTGAG..............................................................................................................18134.003402010301000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGC...........................................................................................................22133.0033020190111000
................................................................................................................................................................TCACAACCTCCTTGAGTGAC..............................................................................................................20132.003200125051000
...................................................................................................................GACTCACTCAACCTGGGTGT...........................................................................................................................................................20132.003206030212000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAA..........................................................................................................23131.003108061160000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGATT.........................................................................................................24131.003101805071000
...................................................................................................................GACTCACTCAACCTGGGTGTG..........................................................................................................................................................21129.0029011018000000
....................................................................................................................ACTCACTCAACCTGGGTGTGT.........................................................................................................................................................21129.0029013060100000
...................................................................................................................GACTCACTCAACCTGGGTGTGA.........................................................................................................................................................22128.0028011212030000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGG...........................................................................................................23127.002706081120000
...................................................................................................................................................................CAACCTCCTTGAGTGAGC.............................................................................................................18127.002706119010000
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGT...........................................................................................................21126.002606010181000
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGAT..........................................................................................................22124.00240826161000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAC..........................................................................................................24123.00230378140000
...........................................................................................................................................TTATTT-CGATATGGTATCCA..................................................................................................................................20123.002304113230000
....................................................................................................................ACTCACTCAACCTGGGTGTGATGT......................................................................................................................................................24119.001901016200000
.....................................................................................................................CTCACTCAACCTGGGTGTGATG.......................................................................................................................................................22118.001801800000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGG.............................................................................................................21117.001700013040000
...................................................................................................................................................................CAACCTCCTTGAGTGAGCG............................................................................................................19117.001701501010000
...............................................................................................................................................................ATCACAACCTCCTTGAGTGAGCGA...........................................................................................................24117.001701700000000
...............................................................................................................................................................ATCACAACCTCCTTGAGTGAGCG............................................................................................................23115.001501101010020
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGATT.........................................................................................................25113.00130811021000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAC..........................................................................................................23113.00130039010000
....................................................................................................................................................................AACCTCCTTGAGTGAGCGA...........................................................................................................19112.001201001010000
...............................................................................................................................................................ATCACAACCTCCTTGAGTGAGC.............................................................................................................22111.00110308000000
....................................................................................................................ACTCACTCAACCTGGGTGTGAA........................................................................................................................................................2219.0090603000000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCA............................................................................................................2119.0090400050000
................................................................................................................................................................TCACAACCTCCTTGAGTGAT..............................................................................................................2018.0080000080000
....................................................................................................................ACTCACTCAACCTGGGTGTT..........................................................................................................................................................2018.0080300050000
.....................................................................................................................CTCACTCAACCTGGGTGTGAT........................................................................................................................................................2118.0080701000000
.....................................................................................................................................................................ACCTCCTTGAGTGAGCGA...........................................................................................................1817.0070700000000
.................................................................................................................................................................CACAACCTCCTTGAGTGA...............................................................................................................1817.0070501010000
.........................................................................................................................................TGTTATTT-CGATATGGTATCCATC................................................................................................................................2417.0070141100000
.....................................................................................................................CTCACTCAACCTGGGTGTGA.........................................................................................................................................................2016.0060600000000
....................................................................................................................ACTCACTCAACCTGGGTG............................................................................................................................................................1816.0060006000000
....................................................................................................................................................................AACCTCCTTGAGTGAGCG............................................................................................................1816.0060501000000
droWil2
AA--------------AGTG---------------TATCC-AATTTGAAATCATCTGAATAAACCAAATTA-----------TAG-AACTTA--A-CACA-TTTTGCCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTATAATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAGTTCAATGAA---A------------------G---A-----------------------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
................................................................................................................................................................TCACAACCTCCTTGAGTGAGC.............................................................................................................21191931.0091931152463043548388859
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCG............................................................................................................2218727.00872732218457833265451
................................................................................................................................................................TCACAACCTCCTTGAGTGAG..............................................................................................................2018011.008011238123108517491
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGA...........................................................................................................2315541.00554112921304468841952
.................................................................................................................................................................CACAACCTCCTTGAGTGAGC.............................................................................................................2013437.003437707432103251
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCG............................................................................................................2113405.00340522042899428790
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGA...........................................................................................................2211297.0012979951382120483
..................................................................................................................................................................ACAACCTCCTTGAGTGAGC.............................................................................................................191912.009123666891
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGT...........................................................................................................231744.0074415532436508
................................................................................................................................................................TCACAACCTCCTTGAGTGA...............................................................................................................191504.0050411115486
................................................................................................................................................................TCACAACCTCCTTGAGTGAGA.............................................................................................................211428.004285002421
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGA...........................................................................................................211291.002915118294495
.................................................................................................................................................................CACAACCTCCTTGAGTGAG..............................................................................................................191283.00283391224226
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAT..........................................................................................................231247.0024731581429115
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAT..........................................................................................................241200.00200883261955
....................................................................................................................ACTCACTCAACCTGGGTGTGAT........................................................................................................................................................221160.0016021260230
....................................................................................................................ACTCACTCAACCTGGGTGTGATG.......................................................................................................................................................231150.0015011320611
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCG............................................................................................................201118.0011821910780
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGT...........................................................................................................22185.0085355270
................................................................................................................................................................TCACAACCTCCTTGAGTGAGT.............................................................................................................21178.0078800070
....................................................................................................................ACTCACTCAACCTGGGTGTGA.........................................................................................................................................................21172.0072358128
..................................................................................................................................................................ACAACCTCCTTGAGTGAG..............................................................................................................18169.0069001266
....................................................................................................................ACTCACTCAACCTGGGTGTG..........................................................................................................................................................20156.00562330003
...................................................................................................................GACTCACTCAACCTGGGTGT...........................................................................................................................................................20151.0051000051
....................................................................................................................ACTCACTCAACCTGGGTGT...........................................................................................................................................................19150.0050090140
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAA..........................................................................................................24145.00450961020
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGG...........................................................................................................23145.00452251215
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGAT..........................................................................................................22142.00426104814
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCA............................................................................................................22132.0032034124
.....................................................................................................................................................................ACCTCCTTGAGTGAGCGT...........................................................................................................18131.0031310000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCC............................................................................................................22131.0031002029
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGC...........................................................................................................23127.0027712017
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCT............................................................................................................22127.0027241119
................................................................................................................................................................TCACAACCTCCTTGAGTGAGG.............................................................................................................21126.0026800018
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGT...........................................................................................................21118.0018511011
................................................................................................................................................................TCACAACCTCCTTGAGTG................................................................................................................18117.0017160001
................................................................................................................................................................TCACAACCTCCTTGAGTGAC..............................................................................................................20117.001780009
................................................................................................................................................................TCACAACCTCCTTGAGTGAA..............................................................................................................20116.0016000016
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGATT.........................................................................................................24115.001529004
....................................................................................................................ACTCACTCAACCTGGGTGTGT.........................................................................................................................................................21115.0015010014
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGG...........................................................................................................22113.0013110011
....................................................................................................................ACTCACTCAACCTGGGTGTGATT.......................................................................................................................................................23113.0013012001
...................................................................................................................GACTCACTCAACCTGGGTGTGA.........................................................................................................................................................22112.001208004
...................................................................................................................................................................CAACCTCCTTGAGTGAGCGA...........................................................................................................20111.0011011000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGATT.........................................................................................................25111.001104115
.................................................................................................................................................................CACAACCTCCTTGAGTGAGA.............................................................................................................20110.001000109
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAA..........................................................................................................2319.00912105
...............................................................................................................................................................ATCACAACCTCCTTGAGTGAGCG............................................................................................................2318.00804004
...............................................................................................................................................................ATCACAACCTCCTTGAGTGAGC.............................................................................................................2218.00801016
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAC..........................................................................................................2418.00871000
................................................................................................................................................................TCACAACCTCCTTGAGTGAT..............................................................................................................2017.00700007
................................................................................................................................................................TCACAACCTCCTTGAGTAGC..............................................................................................................2076.7147001046
...................................................................................................................GACTCACTCAACCTGGGTGTG..........................................................................................................................................................2116.00623001
..................................................................................................................................................................ACAACCTCCTTGAGTGAGA.............................................................................................................1916.00600006
...............................................................................................................................................................ATCACAACCTCCTTGAGTGAGCGA...........................................................................................................2416.00606000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAG..........................................................................................................2416.00600204
...............................................................................................................................................................ATCACAACCTCCTTGAGTGAG..............................................................................................................2116.00610104
....................................................................................................................................................................AACCTCCTTGAGTGAGCGA...........................................................................................................1915.00505000
.................................................................................................................................................................CACAACCTCCTTGAGTGA...............................................................................................................1815.00503011
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCC............................................................................................................2115.00530002
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAG..........................................................................................................2315.00532000
.....................................................................................................................CTCACTCAACCTGGGTGTGAT........................................................................................................................................................2114.00404000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCT............................................................................................................2114.00401003
.....................................................................................................................CTCACTCAACCTGGGTGTGATG.......................................................................................................................................................2214.00404000
...................................................................................................................................................................CAACCTCCTTGAGTGAGCGATT.........................................................................................................2213.00302010
...........................................................................................................................................TTATTTATAATATGGTATCCA..................................................................................................................................2113.00303000
droVir3
GTTAAAGTTACGAAAAAGTGCAAAAGTGACAAAATAAACC-G------------------------------------------------------AACA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTAGTT-CGATTTGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAGTATCCACTAAGCC---------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCG............................................................................................................22184930.00849301933656536235208248337396617083189664373219052496461279686789228210110952755365835223882507118836713531014229011320563122700000000000000000013776812583248621821023313000101
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGA...........................................................................................................23149241.00492411629658614251611965053610519390130032331559880262716231124508242823761984101817831281691198819558782828308605729465847366560000000000000001003952131214415865271261107118710600000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGC.............................................................................................................21147922.0047922872722065686534090872169130380352018371092240633011388276462329832561181011518270589939510846132328154521641700000000000100000111331739872105144645161858121400100
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGA...........................................................................................................22116490.0016490112931812799260988155120370108250438386667136512710549824102844014331866776442727638415439501121191680000000000000000000106805125022132823171131007410100
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCG............................................................................................................21116289.001628913457113605292754214616102013718284561042154261712420601561118666011935399372194451131371221216614900000000000000000001163934302852031302000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAG..............................................................................................................20110722.001072217433050883179260020645347183408706264738816105818151471312258018361091813349800000000000000000000500810602031002000000000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGC.............................................................................................................2015257.005257642378385011429003023710983193284141494322452699116748234714500405235800000000000000000101234714900010000003000000
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGA...........................................................................................................2114109.0041093050510318634164302423021408820622411244360290159501289452146125821943631041144334300000000000000000002189850236831030001000000
....................................................................................................................ACTCACTCAACCTGGGTGTGAT........................................................................................................................................................2213225.00322500593312530011010274183741331174552151827465785309464267120202605250000000000000000000026031821226100001011000000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAT..........................................................................................................2312771.0027717521512202616220102024010463165132711523521177571179056113894212763208116352900000000000001000002127583415212051111211400100
......................................................................................................................TCACTCAACCTGGGTGTGATGT......................................................................................................................................................2212311.002311009030719162176120002421407715710679529221418401156453768435122910026061313000000000000000000011101200100001000000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGT...........................................................................................................2312304.0023044191432688923410102111055515013077292202702549663545145263705022749000000000000000011013517016378001101100000
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCG............................................................................................................2011653.001653011362730502100201489638911397592141792063134364816609230517121000000000000000000011564301400000000000000
....................................................................................................................ACTCACTCAACCTGGGTGTGA.........................................................................................................................................................2111580.00158004326402000000001921015510285512181160010161792834739510500140000000000000000000019011310501000000000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAT..........................................................................................................2411262.00126213211101512249002005097402848404316968239183426123849247391908111131900000000000000010001634112151810062105200000
................................................................................................................................................................TCACAACCTCCTTGAGTGA...............................................................................................................1911057.00105712360111430200003727203446243505891033142731021000016600000000000000000000598400000000000100000
....................................................................................................................ACTCACTCAACCTGGGTGTGATG.......................................................................................................................................................2311054.0010540047228112110200065211345181204443422452915201762730040252000000000000000000016035123000000000000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAA..........................................................................................................241937.0093700642517101000015047277262622103747461719273264616695480460743217000000000000000000003021013910000000000000
......................................................................................................................TCACTCAACCTGGGTGTGATG.......................................................................................................................................................211814.00814002047040111000088482441353208872217113252715243101002010000000000000000000133100100000000000000
..................................................................................................................................................................ACAACCTCCTTGAGTGAGC.............................................................................................................191617.006170236016010020002816141535191056427025288310050100411000000000000000000002561200000000000000000
...............................................................................................................................................................ATCACAACCTCCTTGAGTGAGC.............................................................................................................221570.00570003960110222010331763429183513510915137212111291415033700000000000100000105106900210011210000000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGT...........................................................................................................221521.00521113703226000000027279244121646575224086514110010141300000000000000000000771605378001000000000
.................................................................................................................................................................CACAACCTCCTTGAGTGAG..............................................................................................................191518.00518127370031000000022211019289428102120110105701000002300000000000000000000243100000001000000000
...............................................................................................................................................................ATCACAACCTCCTTGAGTGAG..............................................................................................................211343.00343021801300010000281982817113332613011117481101000100000000000000000000101300100000000000000
....................................................................................................................ACTCACTCAACCTGGGTGT...........................................................................................................................................................191310.0031000290140100000034181817231724736601303222060100230000000000000000000032000000000000000000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAA..........................................................................................................231299.002990017125400000101612514127322261331793151861941060841000000000000000000004901911000000000000
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGAT..........................................................................................................221282.002822129131010200010162614121011917102139812105152502002300000000000000000000108081100000000000000
....................................................................................................................ACTCACTCAACCTGGGTGTG..........................................................................................................................................................201280.0028001313010001000000131091516702319001001304200000000000000000000000000011000000001000000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGC...........................................................................................................231199.00199006012208000001011321359614927100001120200011190000000000000000000122200000000000000000
...................................................................................................................GACTCACTCAACCTGGGTGTGA.........................................................................................................................................................221198.0019800320000000000029115843121122526177470001030100000000000000000000000131300000000000000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGATT.........................................................................................................241180.00180001201820000000201259645613203903671411020063000000000000000000007506100000001000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCT............................................................................................................221158.0015801800200100000149410111116102100116030100001000000000000000000000302400000000000000000
....................................................................................................................ACTCACTCAACCTGGGTGTGATC.......................................................................................................................................................231142.00142004051000000000139023401711030115507000100010000000000000000000000112000000000000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGA.............................................................................................................211130.00130012001200000003531721147100101100010000000000000000000000000175000000000000000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCA............................................................................................................221127.001270016023000000009456832129101113304000001100000000000000000000024700001000000000000
....................................................................................................................ACTCACTCAACCTGGGTGTGATT.......................................................................................................................................................231114.00114004900000000000114564207611120210600020000000000000000000000000004000000000000000
...............................................................................................................................................................ATCACAACCTCCTTGAGTGAGCG............................................................................................................231111.001110026116000000109613811111110150412101000010000000000000000000006200000000000000000
...................................................................................................................GACTCACTCAACCTGGGTGT...........................................................................................................................................................201107.00107002000000000001050210511512000001312010000010000000000000000000033300000000000000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGT.............................................................................................................21195.0095140000010000003111342243100000020000100010000000000000000000049200000000000000000
......................................................................................................................TCACTCAACCTGGGTGTGAT........................................................................................................................................................20192.0092001200000000000102314590191000011121200000000000000000000000000000000000000000000000
...........................................................................................................................................TTAGTT-CGATTTGGTATCCA..................................................................................................................................20191.00910031103000000030001102180722112004000142000000000000000010001100001088902900100
....................................................................................................................ACTCACTCAACCTGGGTGTGT.........................................................................................................................................................21191.00910010011010000001354274068000111100000000000000000000000000000025000000000000000000
....................................................................................................................ACTCACTCAACCTGGGTGTGATGT......................................................................................................................................................24186.0086007002100000001132123208211561200510020010000000000000000000013020200000000000000
..................................................................................................................................................................ACAACCTCCTTGAGTGAG..............................................................................................................18186.008600301000000000614201066000100001000000110000000000000000000051100000000000000000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGC...........................................................................................................22182.00820001543000000032217421201100000101030001250000000000000000000012000000000000000000
...................................................................................................................................................................CAACCTCCTTGAGTGAGCGA...........................................................................................................20178.007800351000100000040040213113010421200000203000000000000000000003000400000000000000
...............................................................................................................................................................ATCACAACCTCCTTGAGTGA...............................................................................................................20174.007402200000000000161533044001101100010000000000000000000000000036200000000000000000
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGT...........................................................................................................21168.006813100600000000135631284400001111010000100000000000000000000011200000010000000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGATT.........................................................................................................25161.00610080021000001063123303621002134200000002000000000000000000005000000000000000000
...............................................................................................................................................................ATCACAACCTCCTTGAGTGAGCGA...........................................................................................................24159.005900200010000000010010002401421021410030100000000000000000000002303200000000000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCC............................................................................................................22157.005700110100000000411321326100000001010000110000000000000000000024200000000000000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGG...........................................................................................................23154.00545581051000000011010000120001121000000015000000000000000000005202200001000000000
...................................................................................................................................................................CAACCTCCTTGAGTGAGCGATT.........................................................................................................22148.00480041140010100031321201410441200102000001000000000000000000000100200000000000000
.....................................................................................................................CTCACTCAACCTGGGTGTGAT........................................................................................................................................................21148.004800420000000000010000001000100000000000000000000000000000000000030000000000000000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGATA.........................................................................................................24147.00470000000000000031211001120010111450080700000000000000000000002201101000000000000
....................................................................................................................................................................AACCTCCTTGAGTGAGCG............................................................................................................18147.00470080032211001041123513300000010200000001000000000000000000002000000000000000000
.....................................................................................................................CTCACTCAACCTGGGTGTGA.........................................................................................................................................................20142.0042001300000000000000000000000000000000000000000000000000000000000290000000000000000
....................................................................................................................................................................AACCTCCTTGAGTGAGCGA...........................................................................................................19138.003800210030011000000010010200100110011000000000000000000000000010000200000000000000
...................................................................................................................GACTCACTCAACCTGGGTGTG..........................................................................................................................................................21138.003801170000000000060113203100000100200000000000000000000000000000000000000000000000
................................................................................................AACA-TTTTGTCTTGCTTTG..............................................................................................................................................................................19136.00360040300000000010001000022240000300010020000000000000000000000000000032014100000
................................................................................................................................................................TCACAACCTCCTTGAGTG................................................................................................................18136.00363750000000000031040202300000010200000000000000000000000000002000000001000000000
.....................................................................................................................CTCACTCAACCTGGGTGTGATG.......................................................................................................................................................22133.003300330000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................ACCTCCTTGAGTGAGCGA...........................................................................................................18131.00310060211000000013002010100120120004000012000000000000000000000000000000000000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGATA.........................................................................................................25130.00300010000000001000000012050000211041030401000000000000000000000000300000000000000
...................................................................................................................................................................CAACCTCCTTGAGTGAGCG............................................................................................................19130.00300080010000001010011125200100111000000001000000000000000000002000000000000000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAG..........................................................................................................24129.00290030210000000021101101120110020200000202000000000000000000003000000000000000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAC..........................................................................................................24126.00262513011000000010020210110100001100000000000000000000000000001000000000001000000
...................................................................................................................................................................CAACCTCCTTGAGTGAGCGAT..........................................................................................................21126.00260050100000000011021201100011200111010000000000000000000000002000000000001000000
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGC...........................................................................................................21126.00260010121000000000002015150000000000000003000000000000000000004000000000000000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAC..............................................................................................................20126.002601000000000000000000010000000000100000000000000000000000000023000000000000000000
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGAA..........................................................................................................22125.00250000020000000010041102220110110200000201000000000000000000001000000000000000000
...................................................................................................................................................................CAACCTCCTTGAGTGAGC.............................................................................................................18125.00250090000000000021111201200001010100000000000000000000000000002000000000000000000
....................................................................................................................ACTCACTCAACCTGGGTGTGATA.......................................................................................................................................................23124.002400500000000000010110000000010001100000000000000000000000000000112000000000000000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCA............................................................................................................21123.00230040010000000032012010100000000001000000000000000000000000006100000000000000000
........................................................................................................................ACTCAACCTGGGTGTGATGT......................................................................................................................................................20123.00230000001010000021013401110110030010000000000000000000000000001000000000000000000
..........................................................................................................................................GTTAGTT-CGATTTGGTATCCAT.................................................................................................................................22123.00230000000000000010010000001032200000000000000000000000000000100000000032013300000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCT............................................................................................................21123.00230010000000000013021005310000010000000000000000000000000000005000000000000000000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGATC.........................................................................................................24121.00210020000000000021010113100000040200000001000000000000000000001100000000000000000
....................................................................................................................ACTCACTCAACCTGGGTGTGAA........................................................................................................................................................22118.00180090000000000000022000000000120010000000000000000000000000000001000000000000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGATC.........................................................................................................25118.00180000011000000021010001200001012200000000000000000000000000002010000000000000000
.........................................................................................................................CTCAACCTGGGTGTGATG.......................................................................................................................................................18117.00170000010000000001010002001503100000000000000000000000000000002000000000000000000
droMoj3
AATAA----------AAATA---------------AAAAC-AACA-------------------------A-----------GAAA-ACT-A----AGAA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATTCGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAGCTAAAC-----CAATAG------------------A-----------------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
................................................................................................................................................................TCACAACCTCCTTGAGTGAGC.............................................................................................................21128802.00288021274601043516225265543
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCG............................................................................................................22115770.001577044065539096480223697
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGA...........................................................................................................23110126.00101264920124119919971038848
................................................................................................................................................................TCACAACCTCCTTGAGTGAG..............................................................................................................2019315.00931517103337565213142
.................................................................................................................................................................CACAACCTCCTTGAGTGAGC.............................................................................................................2015540.00554021731956320114149
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCG............................................................................................................2113857.0038579263972171428214
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGA...........................................................................................................2213800.003800210321372803228273
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGT...........................................................................................................2311777.00177787058798711105
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGT...........................................................................................................2211104.001104310386640344
................................................................................................................................................................TCACAACCTCCTTGAGTGA...............................................................................................................1911003.00100321038359702
.................................................................................................................................................................CACAACCTCCTTGAGTGAG..............................................................................................................191608.0060831019936648
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGA...........................................................................................................211473.004732383621004426
....................................................................................................................ACTCACTCAACCTGGGTGTGAT........................................................................................................................................................221462.00462214215122190
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAT..........................................................................................................231417.0041710706211210630
..................................................................................................................................................................ACAACCTCCTTGAGTGAGC.............................................................................................................191344.0034416013419022
................................................................................................................................................................TCACAACCTCCTTGAGTGAGT.............................................................................................................211321.003212011720011
....................................................................................................................ACTCACTCAACCTGGGTGTGA.........................................................................................................................................................211288.0028822402918161
....................................................................................................................ACTCACTCAACCTGGGTGTGATG.......................................................................................................................................................231263.00263177404762
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCG............................................................................................................201259.00259812778829
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAT..........................................................................................................241230.0023054039854210
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCT............................................................................................................221181.0018140809115
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAA..........................................................................................................241118.001183022046515
....................................................................................................................ACTCACTCAACCTGGGTGT...........................................................................................................................................................191117.0011790555210
................................................................................................................................................................TCACAACCTCCTTGAGTGAGA.............................................................................................................211115.0011530397003
....................................................................................................................ACTCACTCAACCTGGGTGTG..........................................................................................................................................................201114.00114740201550
...................................................................................................................GACTCACTCAACCTGGGTGT...........................................................................................................................................................20182.008210394002
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGC...........................................................................................................23177.00771911828011
..................................................................................................................................................................ACAACCTCCTTGAGTGAG..............................................................................................................18171.007111244500
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGATT.........................................................................................................24169.006980223243
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGT...........................................................................................................21155.005580192611
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCA............................................................................................................22154.005480271900
....................................................................................................................ACTCACTCAACCTGGGTGTGT.........................................................................................................................................................21154.005440232700
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGAT..........................................................................................................22145.00458064261
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAA..........................................................................................................23143.004312081526
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGATT.........................................................................................................25138.003810161902
....................................................................................................................ACTCACTCAACCTGGGTGTGAC........................................................................................................................................................22133.00331000320
....................................................................................................................ACTCACTCAACCTGGGTGTGATT.......................................................................................................................................................23131.00312103070
................................................................................................................................................................TCACAACCTCCTTGAGTGAT..............................................................................................................20129.002900141500
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAG..........................................................................................................24127.00273081600
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGC...........................................................................................................22124.00242071122
...................................................................................................................GACTCACTCAACCTGGGTGTGA.........................................................................................................................................................22123.00231331240
...................................................................................................................................................................CAACCTCCTTGAGTGAGCGA...........................................................................................................20123.00232200100
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGATTT........................................................................................................25122.00225051200
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAC..........................................................................................................23121.00210000210
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAC..........................................................................................................24121.00215023101
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCC............................................................................................................22120.00200071210
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGG...........................................................................................................23119.0019413911
.................................................................................................................................................................CACAACCTCCTTGAGTGAGT.............................................................................................................20119.00190091000
....................................................................................................................ACTCACTCAACCTGGGTGTGATC.......................................................................................................................................................23118.00181600020
.........................................................................................................................................TGTTATTT-CGATTCGGTATCCATC................................................................................................................................24118.00181500120
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCTT...........................................................................................................23116.0016009700
...........................................................................................................................................TTATTT-CGATTCGGTATCCA..................................................................................................................................20115.0015402450
...............................................................................................................................................................ATCACAACCTCCTTGAGTGAGCGA...........................................................................................................24115.00151500000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAGT.........................................................................................................25114.00140041000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCT............................................................................................................21111.0011007400
....................................................................................................................................................................AACCTCCTTGAGTGAGCG............................................................................................................18111.0011600500
.................................................................................................................................................................CACAACCTCCTTGAGTGA...............................................................................................................18111.0011203600
.....................................................................................................................CTCACTCAACCTGGGTGTGA.........................................................................................................................................................20110.00101000000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAG..........................................................................................................23110.0010200701
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGG...........................................................................................................2219.009103500
.................................................................................................................................................................CACAACCTCCTTGAGTGAGA.............................................................................................................2019.009005400
................................................................................................................................................................TCACAACCTCCTTGAGTGAC..............................................................................................................2018.008001520
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGAC..........................................................................................................2218.008000080
...................................................................................................................GACTCACTCAACCTGGGTGTG..........................................................................................................................................................2118.008600020
droGri2
GAAAAAATT------AAATA---------------AAA----ATA-------------------------A-----------AAG-AACT-A----AACA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATTTGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAGAA-AACAGGCGACAG---------------------------------------------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCG............................................................................................................2212430.0024301762668
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGA...........................................................................................................2311852.0018521159693
................................................................................................................................................................TCACAACCTCCTTGAGTGAGC.............................................................................................................2111039.001039824215
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGA...........................................................................................................221827.00827627200
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCG............................................................................................................211389.0038931574
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGA...........................................................................................................211151.0015112229
....................................................................................................................ACTCACTCAACCTGGGTGTGAT........................................................................................................................................................221138.001381380
.................................................................................................................................................................CACAACCTCCTTGAGTGAGC.............................................................................................................201125.0012510025
....................................................................................................................ACTCACTCAACCTGGGTGTGATG.......................................................................................................................................................231102.001021011
................................................................................................................................................................TCACAACCTCCTTGAGTGAG..............................................................................................................20182.00826616
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAT..........................................................................................................23164.00644915
....................................................................................................................ACTCACTCAACCTGGGTGTGA.........................................................................................................................................................21164.0064640
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGT...........................................................................................................23163.00632736
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCG............................................................................................................20151.0051456
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAT..........................................................................................................24131.00312110
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAA..........................................................................................................24117.0017116
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGT...........................................................................................................22113.001385
....................................................................................................................ACTCACTCAACCTGGGTGTG..........................................................................................................................................................20112.0012120
..................................................................................................................................................................ACAACCTCCTTGAGTGAGC.............................................................................................................19112.0012120
.....................................................................................................................CTCACTCAACCTGGGTGTGA.........................................................................................................................................................20111.0011110
...................................................................................................................................................................CAACCTCCTTGAGTGAGCGA...........................................................................................................20111.0011110
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGC...........................................................................................................23110.0010010
....................................................................................................................ACTCACTCAACCTGGGTGTGATT.......................................................................................................................................................23110.0010100
.....................................................................................................................CTCACTCAACCTGGGTGTGAT........................................................................................................................................................2119.00990
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGG...........................................................................................................2319.00936
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCT............................................................................................................2219.00972
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAA..........................................................................................................2317.00734
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGAT..........................................................................................................2217.00761
...................................................................................................................................................................CAACCTCCTTGAGTGAGCG............................................................................................................1917.00770
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGATT.........................................................................................................2417.00761
.................................................................................................................................................................CACAACCTCCTTGAGTGAG..............................................................................................................1917.00761
................................................................................................................................................................TCACAACCTCCTTGAGTG................................................................................................................1816.00660
...............................................................................................................................................................ATCACAACCTCCTTGAGTGAGC.............................................................................................................2215.00550
...............................................................................................................................................................ATCACAACCTCCTTGAGTGAGCG............................................................................................................2314.00440
...................................................................................................................................................................CAACCTCCTTGAGTGAGC.............................................................................................................1814.00440
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGATT.........................................................................................................2514.00413
.....................................................................................................................CTCACTCAACCTGGGTGTGATG.......................................................................................................................................................2214.00440
......................................................................................................................TCACTCAACCTGGGTGTGAT........................................................................................................................................................2014.00440
....................................................................................................................................................................AACCTCCTTGAGTGAGCG............................................................................................................1813.00330
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGT...........................................................................................................2113.00321
................................................................................................................................................................TCACAACCTCCTTGAGTGA...............................................................................................................1913.00330
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCA............................................................................................................2213.00321
....................................................................................................................................................................AACCTCCTTGAGTGAGCGA...........................................................................................................1912.00220
....................................................................................................................ACTCACTCAACCTGGGTGT...........................................................................................................................................................1912.00220
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAGT.........................................................................................................2512.00220
...............................................................................................................................................................ATCACAACCTCCTTGAGTGAGCGA...........................................................................................................2412.00220
...................................................................................................................................................................CAACCTCCTTGAGTGAGCGATT.........................................................................................................2212.00220
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCA............................................................................................................2111.00101
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAG..........................................................................................................2411.00110
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGACT.........................................................................................................2511.00110
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGATTTT.......................................................................................................2711.00110
......................................................................................................................TCACTCAACCTGGGTGTGA.........................................................................................................................................................1911.00110
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGG...........................................................................................................2211.00110
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCT............................................................................................................2111.00110
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAGGC........................................................................................................2511.00110
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGATTT........................................................................................................2511.00101
...........................................................................................................................................TTATTT-CGATTTGGTATCC...................................................................................................................................1911.00110
.................................................................................................................................................................CACAACCTCCTTGAGTGA...............................................................................................................1811.00110
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGTG..........................................................................................................2411.00110
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGGC..........................................................................................................2411.00110
......................................................................................................................TCACTCAACCTGGGTGTGATG.......................................................................................................................................................2111.00110
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCTG...........................................................................................................2311.00110
...................................................................................................................................................................CAACCTCCTTGAGTGAGCGAT..........................................................................................................2111.00110
..................................................................................................................................................................ACAACCTCCTTGAGTGAG..............................................................................................................1811.00110
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAC..........................................................................................................2411.00110
.....................................................................................................................CTCACTCAACCTGGGTGTG..........................................................................................................................................................1911.00110
...................................................................................................................GACTCACTCAACCTGGGTGT...........................................................................................................................................................2011.00110
..............................................................................................................................................................CATCACAACCTCCTTGAGTGAGCG............................................................................................................2411.00110
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGAG..........................................................................................................2211.00110
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGATA.........................................................................................................2311.00110
.......................................................................................................................CACTCAACCTGGGTGTGAT........................................................................................................................................................1911.00110
...................................................................................................................GACTCACTCAACCTGGGTGTGAT........................................................................................................................................................2311.00110
...................................................................................................................GACTCACTCAACCTGGGTGTGA.........................................................................................................................................................2211.00110
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCTT...........................................................................................................2311.00101
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAAT.........................................................................................................2511.00110
.....................................................................................................................................................................ACCTCCTTGAGTGAGCGT...........................................................................................................1811.00110
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAG..........................................................................................................2311.00110
....................................................................................................................ACTCACTCAACCTGGGTGTGATGGA.....................................................................................................................................................2511.00110
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGGCG.........................................................................................................2511.00110
................................................................................................................................................................TCACAACCTCCTTGAGTGAGA.............................................................................................................2111.00110
.....................................................................................................................CTCACTCAACCTGGGTGT...........................................................................................................................................................1811.00110
...................................................................................................................GACTCACTCAACCTGGGTG............................................................................................................................................................1911.00110
.......................................................................................................................CACTCAACCTGGGTGTGATG.......................................................................................................................................................2011.00110
........................................................................................................................ACTCAACCTGGGTGTGATG.......................................................................................................................................................1911.00110
droAna3
AC--------------AGTG---------------AACCCCAATCCGAAACG-------------------------------AAA-GTT-A--GCAGCCTTTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACAAGAC----------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
................................................................................................................................................................TCACAACCTCCTTGAGTGAGC.............................................................................................................211118772.001187721520641311558705104912
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCG............................................................................................................22119265.00192654716144781015325189
................................................................................................................................................................TCACAACCTCCTTGAGTGAG..............................................................................................................20111224.00112241602027831878092
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGA...........................................................................................................23110353.001035341518511311415131479
.................................................................................................................................................................CACAACCTCCTTGAGTGAGC.............................................................................................................2015117.0051171621012661563532
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGA...........................................................................................................2213232.00323210851431322407401
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCG............................................................................................................2113090.003090564001438294794
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGT...........................................................................................................2312016.002016126005741841132
................................................................................................................................................................TCACAACCTCCTTGAGTGA...............................................................................................................1911343.00134343014283868
................................................................................................................................................................TCACAACCTCCTTGAGTGAGA.............................................................................................................2111300.0013001004771245
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGA...........................................................................................................211808.008082614236763111
...................................................................................................................GACTCACTCAACCTGGGTGT...........................................................................................................................................................201580.0058080011820434
..................................................................................................................................................................ACAACCTCCTTGAGTGAGC.............................................................................................................191398.0039812001702214
................................................................................................................................................................TCACAACCTCCTTGAGTGAGT.............................................................................................................211383.00383100616315
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAT..........................................................................................................231333.0033397821194166
.................................................................................................................................................................CACAACCTCCTTGAGTGAG..............................................................................................................191330.0033012001174197
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCG............................................................................................................201328.0032854001852267
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGT...........................................................................................................221292.0029225009929139
....................................................................................................................ACTCACTCAACCTGGGTGT...........................................................................................................................................................191192.00192900125058
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAT..........................................................................................................241189.001896190462350
....................................................................................................................ACTCACTCAACCTGGGTGTGAT........................................................................................................................................................221137.00137866118125
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCT............................................................................................................221135.001351402471656
....................................................................................................................ACTCACTCAACCTGGGTGTGA.........................................................................................................................................................211126.00126651026133
................................................................................................................................................................TCACAACCTCCTTGAGTGAGG.............................................................................................................211123.0012300054114
....................................................................................................................ACTCACTCAACCTGGGTGTGT.........................................................................................................................................................211113.0011330019289
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAA..........................................................................................................241109.001092302381531
................................................................................................................................................................TCACAACCTCCTTGAGTGAT..............................................................................................................201107.001070006299
....................................................................................................................ACTCACTCAACCTGGGTGTGATG.......................................................................................................................................................23177.007752905110
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCA............................................................................................................22175.0075900361020
...................................................................................................................GACTCACTCAACCTGGGTGTGA.........................................................................................................................................................22153.005325006121
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGC...........................................................................................................23149.00491104412
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGATT.........................................................................................................24146.004612008620
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAA..........................................................................................................23143.004340015519
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCC............................................................................................................22143.004300018124
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGG...........................................................................................................23143.0043100016512
....................................................................................................................ACTCACTCAACCTGGGTGTG..........................................................................................................................................................20140.00403200503
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGAT..........................................................................................................22137.003715101434
..................................................................................................................................................................ACAACCTCCTTGAGTGAG..............................................................................................................18134.00340002509
...................................................................................................................................................................CAACCTCCTTGAGTGAGCGA...........................................................................................................20132.00321810904
.................................................................................................................................................................CACAACCTCCTTGAGTGAGA.............................................................................................................20125.00250005020
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGT...........................................................................................................21125.00251007710
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGATT.........................................................................................................25121.0021700275
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCT............................................................................................................21120.00201006310
....................................................................................................................ACTCACTCAACCTGGGTGTGATT.......................................................................................................................................................23119.00191710100
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGC...........................................................................................................22118.00181001412
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAG..........................................................................................................24118.0018100638
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCA............................................................................................................21116.0016100087
...................................................................................................................GACTCACTCAACCTGGGTGTG..........................................................................................................................................................21114.00141000004
.................................................................................................................................................................CACAACCTCCTTGAGTGA...............................................................................................................18114.0014200408
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGG...........................................................................................................22113.0013400612
...................................................................................................................................................................CAACCTCCTTGAGTGAGCGATT.........................................................................................................22113.0013800311
................................................................................................................................................................TCACAACCTCCTTGAGTG................................................................................................................18112.0012200307
................................................................................................................................................................TCACAACCTCCTTGAGTGAC..............................................................................................................20111.0011010406
...............................................................................................................................................................ATCACAACCTCCTTGAGTGAGC.............................................................................................................22111.0011100109
...................................................................................................................GACTCACTCAACCTGGGTGTGT.........................................................................................................................................................2219.009000009
.................................................................................................................................................................CACAACCTCCTTGAGTGAGT.............................................................................................................2019.009100404
...................................................................................................................................................................CAACCTCCTTGAGTGAGCG............................................................................................................1919.009900000
....................................................................................................................ACTCACTCAACCTGGGTGTT..........................................................................................................................................................2019.009000405
droBip1
-----------------GTG---------------GACCCCAATCCGAAACG-------------------------------AAA-GTT-A--GCCGCCTTTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACAAGAC----------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
------------------TG---------------AAACC-GGAA-------------------------------------CAGA-GTT-A--GCCGCA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAACTAACTG-----------------------------------------------------------------TGCAACAAATGSizeHit CountTotal NormTotal
No Reads
droFic1
AAA------------AAGTG---------------AAATC-GGTG-------------------------------------CCGGGGCT-A--G-AGCA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTACCCACGGATCTAGCCAAGTCG-G-----------------TCA---------------------------------------GT--------SizeHit CountTotal NormTotal
No Reads
droEle1
AA-------------AAGTG---------------AAACC-GATG-------------------------------------CAAA-GTT-A--GCAGCA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACAAATCTAACTGACACGTATGAAAC-----TTA-------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
AA-------------AAGTG---------------AAACC-CATG-------------------------------------CAAA-GTT-A--GCAGCA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAACTAACTGGCAACCATCGAAA-----TTA-------------------------------TCGAAAAAATAAGAAG--------SizeHit CountTotal NormTotal
No Reads
droBia1
AAA------------AAGTG---------------AAACC-GATG-------------------------------------CAAA-GTT-A--GCAGCC-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAACTAACTGACATG----------------T--TAAAA-------------------------------------AT--------SizeHit CountTotal NormTotal
No Reads
droTak1
AAA------------AAGTG---------------AAACC-GATG-------------------------------------CAAA-GTT-A--GCATCA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC----------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
AAA------------AAGTG---------------AAACC-GATG-------------------------------------CAAA-GTT-A--GCAGCA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAACTAACTTG--------GAAA-----TTA---GAAAAATATTAATTAAAT--T--GT-----------ATTAGTAA--------SizeHit CountTotal NormTotal
No Reads
dm3
AAA------------AAGTG---------------AAACC-GATG-------------------------------------CAAA-GTT-A--GCAGCA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAACTAACTGGCACCAGTGAAATACATG---TAATAA-------------------------------------------------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCG............................................................................................................221198975.0019897500001445000551466117207620676111261277412435715631459680152283611549158310136019164351212513127895452390002171858300000000000000000281719231846013194135112134705518790310230512745347740641920065211683711182910041549681941925111091115692876117581846846000050102014531048413446519946866472742113470000043620914929125015824231917019263221741638641686479835131814126651497637632552227137016974026325250401000001041312303341931232975621343179062116004411638701169740011332181214660044010018821721619114553121351711266521091234820488569335143837248119328647323297124278615147762619861514107284573505133432658819340342714747141011420151456944549256747239168611119192262524461513183578859179426853314612474725784043383313279425982632466983823441187941055964323737727734325472184139613780
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGA...........................................................................................................231191906.0019190600009181011223361820810121101001022319014515022379951109900253739151393172774601551412161223827318962119079568000177122833660000000000000000012612887531043218147280567304287377112272531157279362012061438261619513154627603729315330595410972108641643112121375357895295720734120022212900810636903572895735752964098175357146000006142001755728623712991486011511017801233401066272370830391902061205221351884684363404293022073818622300000297243160604195785248774020416429961184265610212434218733355733860860013290056350859124327236168169133226930159186634175731742423378699121605393668140612458232462776108539085414121267421964291362400123226610666761298528114615881388127925696108872153920269416683258591220581592738221089652127814743404446396378647943940001155702965738764501423225422326345414621401587122122
................................................................................................................................................................TCACAACCTCCTTGAGTGAGC.............................................................................................................211185362.00185362000012050001254411556923015171488013307424301075720131201302201431601024320185626160513328611584794038600134872600000000000000000151813223420001360522303879151041791324210711125141683212313163101062183481953143321114084243324333218191001600000013141323722874323330793933443200000138991203012063545586036284860816341154282956387461434613221271020110993422001160553100000114419020012227139124208107013436314242116725813133656249790049000015148277710048157021033531330510311291823741365105091527936374494012888777824139163481213719542127666391763076103259515009749524828814613956977469922940690811040821618213311855124237389692353585759531280101952271722666889899264296018410985252067011303145284191205103339754446951700
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGA...........................................................................................................22165590.0065590000048200035586484016002127317011273181248554603044149254624261313379302713115371413482210000349364850000000000000000022241516889363213034570922392310520757174610440508187871885659046915141093294126127318236701773821343035624925000000246001226024912826317327823564323107480000028715990331247521881918020410335262916523197041131229022826211053759865761111431034780000044610101003082311321376211682478161737450128816601826374219212001601001021013528846747292781910539247871323111061852274301248993074341681560725976245933794449724225727316317217976230347869056165552985283251365812734077209394159311315112817930739874111266100157190792036821747132121420125591248368888363833281
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCG............................................................................................................21134800.003480000005920001110021102000661810175026270257110131923773012021331731326941300027501100000000000000000443077000002015131615421251426512832578965177398006410113135169401190242055015338130117000000000003200652471278570611205000007041255338221029916057710399291729533971618130623105113573444311900020124740000091211001021571427922204108172472013010366115187770020000131518352095313123109520064210140592711457195948441714918622594297134341137127291482218119589512889261322125615041508209324535223315136176620506681564324741017516728545237232968725319127528311115340595365344461031161851580
....................................................................................................................ACTCACTCAACCTGGGTGTGAT........................................................................................................................................................22130057.003005700005840112263710013051530171054417226811025253015302812211233400002391295800000000000000000139170112152157509300135621306223135873912411081612933628378206621160515111586989224001435240736041114260000000000011001051286730103000000100000481460042215123623014718652444137880311001352341300030100000025000000700402122223165130302515272752000000062019929073105091010661492189137140338600090217081441102791902311017010104812020240000201030012010200106214801
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGA...........................................................................................................21129802.00298020000120000000339001001713105001102124191258221266511201917531689231348132274195156000346405494000000000000000004144434542003413501610244211321313256440784613351302220454115561722433203204213291591304900000020002220084751099110786618113617000001161869183386945794088612164299420763940719401381421576444325300001821327000001022601150212148102100212981912818402035546357651118051200180000865562430363121220771166901046711291121512318912754614015518659361104474050290482973929827210127152123415351532732373302193193112981759191231061451971051525352396203208259602560764003201281424276560935214545261255291751830
................................................................................................................................................................TCACAACCTCCTTGAGTGAG..............................................................................................................20129790.002979000002200000000091012001590068009840231213871118673207221853562527730001581423200000000000000000313183000031122689412229223700212171482536672152201561126211901961301831818117800110000000000027325222293020200000491134502036438201752020336284269217024118013145007022814138000190700000063700100382318188235817291023737215600200003331861136979171203173121062403524112365701205664402112901831323993721144121471306715815355614928614861786148116822629203831231012262101881212614221531112251154619716358126190128039282942183329223196472733850
....................................................................................................................ACTCACTCAACCTGGGTGTGA.........................................................................................................................................................21129597.00295970000300000002120002300051011211373634701220230210111200101100000153281840000000000000000018420514915811320000242621083818374616102253141748514326711024901321112510306121270183868153130000000100000112312000000000030333032313060015262722119386183718142010709374210801010461000012000006000000200000000032461646271132529616053050100052035030414030511435033727640161801001701010143105148830012100120001102915220700000000101510001010404
.................................................................................................................................................................CACAACCTCCTTGAGTGAGC.............................................................................................................20117266.001726600007000000000600200104602210561126300078748717552130713630320005610000000000000000001111400000300101201306100006259001110002101002048260190214220319363500010000000000032322530286510500000238441222178197078101137961215106014120811240416105102000110320000000000000313625266202010259131133310000300002064048169816014310320624142414119174342573946320111103411913767241018108231103013983648892911560947816110318041147152622103771112713109103510051741893887131496828059436181749243329211148302293240
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGT...........................................................................................................23114996.001499600004000000000300100010160027400000000914511652758394103411332100000000000000000000000000114000003060023021235007770341419010101031029904024515736844000000010010008537398403001147000002158154113611912209800276691851120016631593808633611159000182560000081200200045753610802454356330482741649100110003215171801910805219922312516926512657322114342556173135392200225335137317513624019064461860561258274001686357161341122818117127812108157234229436183033447296274160610924687133342847344151791930
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAT..........................................................................................................2317687.0076870000700001001030000034900012013645000010123650193434615062053220004360000000000000000042027302001205514252154541731335018023667882631805361841017026923121530210000000000030003024632935367752070000023019851417818901630081543731910197401460246111331300042222000001011000000422021156126303597501147085171062004010012142111113211213031674178611434598114455807363461101167816741686156115293011253719283802407537253255683941172821434133460135111119252681115831593292182313241518211669444
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCG............................................................................................................2015202.0052020000310000000100000041200023200234271023133527532031713131722000166270000000000000000053333000013000060026140021471191050101000011161090190134701159000000000001000117111019166321300000161854670885106600323223504003410601501097210500030540000000003000364519112523541344121213282120000000055169136440185707320151062113424252810430225143781880024213594731319481761971261591672780265832435516313734255680593416195511691298631804801340810910211311226480
....................................................................................................................ACTCACTCAACCTGGGTGTGATG.......................................................................................................................................................2314873.0048730000121001011014000100130001871479660103214032100041351094300016410000000000000000019248181620750180632624721718123244107310370131279010310065803100010103001002010011000000512108135126010000000005737130221610337716897111121100400128120101000000000031000000340195297975211699144132265050000000081001512031502015207140137153149202442631005050701303441038323052131414330000272705160001241010050011002052317
................................................................................................................................................................TCACAACCTCCTTGAGTGA...............................................................................................................1914737.0047370000000000000010000001010071523534200101002110100020101000172270000000000000000000006000003011211002956102382102140100000011115142806220433782740024000000000003010127003000000661245096166080019441342513421734204716033452220002030000000000000015149169101202060000010000106147650201932216066831801011101747191377042109000766360352952194179138246359004526201016214221140261201001510012010490221430221630
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAT..........................................................................................................2414515.00451500002100000210100000223000230112231000710210107173542161530230005041190000000000000000033114100004043351442191012249321832650010800030325090140130204161900000000000000029103616172173792000001302100638507400673312414308911001550172147780017029000006500000018105134912212270306633671076000112001071375330780512121122016164012642421157502040012411268931730525185153274641340712911914298192419159220202925838101012180103301772191341551161028250450
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAA..........................................................................................................2413246.003246000050000000012001002040001300000000331522652312118145000000000000000000000000100270000030053902234300121512191655001120000041002023702622220000000000000000177111069833700000017002406785080007731232050094301551194115560004046000001252000101413952461251571713153150001100045136622241503024770408182143456391374319200633134512256367191108332512332041410611233714128201412461735615121017837121010413213172757213429220
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGT...........................................................................................................2212975.00297500000000010000100000002000150000000012100331400120213200000000000000000000000000008000000031013022120033220053000000000015100000119293000000000000000101401543000000000130920524403600251107024055000016010242100000020000000200000020751461105414206100000002060147200864120834153212762281113319620021033012227121552829167911600112814671228284151612022596850336237101220188788446706136340
..................................................................................................................................................................ACAACCTCCTTGAGTGAGC.............................................................................................................1912913.00291300000000000000000000017000100000000875136714071423153200063600000000000000000012100000010000200601000012001200000000014595029081100301300000000000000053517890020000004004001612041013112230120150000804333110000000000000000000091022193142331070300000000203888244121301070271312216338222201412100242043468217012391031756599431047112313913525500101213500181910137101713812012010101909122332822311912110
...................................................................................................................GACTCACTCAACCTGGGTGTGA.........................................................................................................................................................2212794.0027940000000001000000000001000001107057100000110110001001100000132500000000000000000998740000000011220614001195408620000000000081121010611071525600000001000000000000062500000000000001891710159111227117911182319810000046600000000010000000000000000001023439449477627124400000001300331200500011111000511430264000120102033110220060110000000000033000400000000100000000000136
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGC...........................................................................................................2312002.00200200000000000000130000021400050000000061238468618205421234601321100000000000000000000000000040000010042605802003240211100002000151302608050909437360000000000000000313253800250000050111001812015006120901040002003010000000010000001100000022022323100020300001000211014752041604062113104676510411025870000921141621438204116152337041774217692281114100652236110235142021561422300447110
.................................................................................................................................................................CACAACCTCCTTGAGTGAG..............................................................................................................1911882.0018820000000000000000000001000330011913000110000100300001200000132570000000000000000000101000001000010010200020120020000000000072000100053105000000000000000102022100000000050010035320800101412401703800261203140110003010000000000000012202551111000000000000003656502049302051148002421341121511440024152101535116094721322350150130301103121207001702001320080441550112054430
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAA..........................................................................................................2311710.001710000000000000000000002320005000000001801002430022076120000000000000000000000001006000303000270010020098390414310000111100174030322051115000000000001000716915135240310000013013040628405600252102001914500001045130500021100000004000000166241086712511127211100100001400221002401032604065130121614020184000517514625117265030172629290220831318720661112017311131512542542131302868442460418110
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGAT..........................................................................................................2211545.00154500001000000101000000002000600000000410242331150120361311000108300000000000000000066233008107030442310160025112306285100001000005100012100021000000000000000791781081210000000000250272304100290808014001020335512000002300000700000001133621514510142411104210000000053211001012001852400452062410702119141001174272214224697268149170181047141033932100176201917351618231422006175120103213210
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGT...........................................................................................................2111150.00115000000000000000000000003200050000000012101011000112030000000000000000000000000000130000000000200100001050000000000000042020000000110000000000000003020980000000002707700770140044030208000040230000000001000000000040006432311002210101000000000012031000211010430001212082407800002315092404201021131232003160590336622025367114101161601212144310131110110
....................................................................................................................ACTCACTCAACCTGGGTGT...........................................................................................................................................................1911029.00102900000000000000000000105000000000000010000010000001100000124000000000000000002112900002521011210240713531141910384100000000300000000300600000000000000032025130000000007005001643080015206012316105010650001000100000000000000004512023000000001000000023311200000190009341704300102017110000000105000191120221530440023450400642904500000003000103147113100012020
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCATC..........................................................................................................241929.009290000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000564365000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGA.............................................................................................................211928.0092800009000000000000000012000800000000200100540030002111000000000000000000000000000000300000000012004000010290001000000000072011031303023000000000000000001004000000000000100580000670607071000103600000000010000000000000000001000000010000010000000228902096209015101319021311412013162300320111005102069462858360000000000506111000480100620050069210000421470
...................................................................................................................GACTCACTCAACCTGGGTGT...........................................................................................................................................................201805.008050000000000000000000000000060019100001001000000000021000001000000000000000000000003000001000030070000222005130000000000200000000313200000000000000020200500000000001004001150400710111020400004037000030000000000000000000875011300000000000000000003183021939030039460100013400566100000006004101016282434750010121110012167170222801106410102102210100103260
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGC...........................................................................................................221780.00780000000000000000000000120001000000000702022040010102144501000000000000000000000000000300000000111112000021200200000000002175140506130331127290000000000000001142211101000000010071552902300010301010000006000000000010000001000000300120200010204000000000000300300200021210102203030332000020202000111173247015300304212121010004000010202002211110110120
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCT............................................................................................................221665.00665000000000000000000000010007000000001300003100010002000000000000000000000000000001000000120110020000001000100000000003100010102017180000000000000004020225000000000422601181205001301160100002027011100000000000003000000722020624040202200000000032320005180101234310111164101862100010804031530871561932007713110112176161014000082101024011000001450
....................................................................................................................ACTCACTCAACCTGGGTGTG..........................................................................................................................................................201631.0063100000000000000500100001000011000000000001010000000000000208720000000000000000035414000000000010050000015101224000000000010000000000010001000000000002010150000000000063001641011221257774114762020005000000000010000000000000000000010010000020100000000020010090003200900001020022310000000000001024011500001000000000161100000000000000200000000006
................................................................................................................................................................TCACAACCTCCTTGAGTGAGT.............................................................................................................211627.00627000021000000006000000030003000000000000000500000023000000000000000000000000000001000001000011000040000132013000000000012010002060330000000000000000000010000000002001105301000704230100002080200000000000000100000003110301000001060000000000123220302813401405310170113210110111013001000001102002325141415000020000040320000014000031001035900200050430
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCA............................................................................................................221547.005470000100000010100000000000000000000000100011000000120000000000000000000000000100050000000000170010200312010530000000001430204030703400000000000000000200300000000010011018240150091205010091000003610000000002000000000000012004020101000000002000000012000214010320100125255308620001102200017012516421190012203021214402100121000121003024122121010590
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGG...........................................................................................................231547.00547000000010000000000000000000000000000304100440002117710000000000000000000000000000001000000011030200200454134301000000218402041808047000000000000000000000000000000000000111208001140301801600000037000000000000000001100000201147301001101000000001000200101201000102010303110551000121300010321271291612001301020410210112070201115704014011211010220
.....................................................................................................................CTCACTCAACCTGGGTGTGAT........................................................................................................................................................211526.00526000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000130020000141203570001100000100000000000000000000000000000000000000000000000013010012010200000000200000000000000000000000000000000100000200000000000000000000000000000000000001000012000000000000000000000000000000000000000000000000000000000463
....................................................................................................................ACTCACTCAACCTGGGTGTGT.........................................................................................................................................................211438.0043800001000000000000000002000100000000000000000000000000000000000000000000000001020190000000000900700000032020000000000002700100000180615000000000000000000002000000000000200263901400140404460000109000000000000000000000000000000100100000200000000010510001630003000000100101014000010000000040013441300000000000000420002000000000014400000020431
..................................................................................................................................................................ACAACCTCCTTGAGTGAG..............................................................................................................181404.004040000000000000000000000000000000000000000000000000100000012143100000000000000000000000000000000000000000000000000000000039030102020210000000000000000000140000000004001003601000103020200101070000000200000000100000001021001020000010000000000211400001120010100100230622075210012021802290292217255400100000001012070007000031101003000001000000
....................................................................................................................ACTCACTCAACCTGGGTGTGC.........................................................................................................................................................211352.00352000000000000000000000000000000000000000000000000000000000000000000000000000022000000000000020013000000200200000000000122510000103601536000000000000000000000000000000000010492801720010003140000002000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000010000000000100000010000000000000000000000000000
...........................................................................................................................................TTATTT-CGATATGGTATCCA..................................................................................................................................201340.003400000000000000000000000000001140000001100000100001002010000000000000000000000000003000000000020041000181100010000000000110002120300100000000000000001210400000000000000018180171112233184432500000200000000000000000000000000000002100001100000000000001100000112110200011903008220000000000011187891108000121100000000300800000100100300001010100
....................................................................................................................ACTCACTCAACCTGGGTGTGATT.......................................................................................................................................................231340.0034000001000000001000000000000000000000000020000000000001000000000000000000000001011100100500015115210025371822480000010100400000000000100000000000000010010100000000000000113130722333904151000002200000000000000000000000000010000231122070000000000000000001000101000100002000200000000100000103000000000000000000010001000000000000000000000044
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAC..........................................................................................................241278.0027800001000000000000000010000100000000000100151001010400000000000000000000000001100000000401003000000000001040000000000610103010014200000000000000041020700000000040000014030012010403000010100000000000200000000000001200011241228220000010000002000002000410000022041106400000213022201209654401203023022102032235100283117011111002000220
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCC............................................................................................................221246.002460000100000000000000000000000000000010000092000000030000000000000000000000000000010000000010100010000030000000000000011000000030020000000000000000020040000000001000009303002102010100001016000000000000000000000000000000300001103000000000002110002200001011002002000210100000203100612497471200121030009205100002000140101001120000020010
...................................................................................................................................................................CAACCTCCTTGAGTGAGCGA...........................................................................................................201237.00237000000000000000000000000002000000000000000000000000000004230000000000000000000000000001000120020010102001217000000010021000001020110000000000000000010280000000000000078120800310503040000005000000000000000001000000400042024123614000000001000010000200000010001002401200000010113010321612330032000000102102000000001200101700100001000
.....................................................................................................................CTCACTCAACCTGGGTGTGA.........................................................................................................................................................201222.002220000000000000000000000000000000000000000000000000000000000100000000000000000000010000000000100000000224030300000000001001101000311100000000000000000000000000000000000021320121014601001032000000037000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAG..........................................................................................................241220.002200000100000000000000000000010000000001001000000000001000000000000000000000000100000000000000100100001010000000000000040010000020000000000000000001000150000000000000008608003002080600001015000000000000000000001000000020001001000000000000100600100201010103003101000131000020102020100712851000002011003031020011100045005021910111010110
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGC...........................................................................................................211212.0021200000000000000000000102000000000000010002217000303461000000000000000000000000000000000000000100500001000020000000000025201000008138000000000000000101003001000000000320131401200000100000010001000100000000000000000000021000001100002000000001010020000100000000000000110110000020004011111400120110001000340105200100001000100300000001000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGATC.........................................................................................................251195.00195000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000076116000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000100
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGAA..........................................................................................................221194.00194000000000000000000000000002000000000000001000110000000000000000000000000000000010000000000000010000008000100000000000002000000000000000000000000001005000000000000200980500100201060000001100010001001000000000000001150211110004010000001000110010000000021000000104100551100220014030222242020000111000210102211110104200300600000000110
................................................................................................................................................................TCACAACCTCCTTGAGTGAT..............................................................................................................201188.0018800001000000000000000000001100000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000917780000000000000000000010000000002000004100000000000000001020000000000000000000000000000000000000000000000000003201028000002000071110000400000000000003009664120000100000100000000100000000000200000000100
...................................................................................................................GACTCACTCAACCTGGGTGTG..........................................................................................................................................................211184.001840000100000000010000000000000100000000000010000000000000091000000000000000000000010000000001100600000119030400000000000000010001052000000000000000001001000000000000000750800321126121330000020000000000000000000000000002000000000000000000000000100000000001101000001000010000000000001100000230100000000000010000100000000000200000000110
................................................................................................................................................................TCACAACCTCCTTGAGTG................................................................................................................181179.0017900000000000000000200000000005327000000000100000000000000463000000000000000000000000000000010001100020900100000000000000000000652300030000000000000000000000000000000025000077325602101010230000000000000000000000000000000000000000000000000014000000000110000020000012200000000000002006274110001000000000000000000000000000000000000000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGG...........................................................................................................221174.001740000000000000000000000000000000000000000001200010212000000000000000000000000000003110001000160011201314000200010000004001010203020000000000001000001000000000000100000813013001001010500000080000000000700000000000000120301000010010000000010001210001000000020000000001100000000000001004400400320000002000010000000020100001100000000000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGATT.........................................................................................................241173.001730000100000000000000000000010000000000000002000000100000000000000000000000000000000000000000000120003000041000000000010000000000000000000000000001000140000000003000004302003100010500000051211000100000000000000005211400010100120000000000000010001000110110020004302300010001120111106331201211102010110000155010071005011010000001330
................................................................................................................................................................TCACAACCTCCTTGAGTGAGG.............................................................................................................211159.00159000000000000000000000000000000000000100000200000040300000000000000000000000000000400000000003000000000100100000100000000200100002200000000000000000000100000000000000021000001010201000000400000000000000000000000000000000000000000000000000410400011314034004000011001730000112211000000943530010000100102000000200000000000100000000000
.........................................................................................................................................TGTTATTT-CGATATGGTATCCATC................................................................................................................................241158.00158000000000000000000000000000000131000000000000000000000000000000000000000000000000000000000000000011101100000001000000000000001102000000000000000000020000020000000000001010003010000130000001000000000000000000000000000000901153230000000000000100000000103100500130002300000001000000045031503000037020000001301800000010100000000000800
....................................................................................................................ACTCACTCAACCTGGGTGTGG.........................................................................................................................................................211143.0014300000000000000000000000000000000000000000000000000000000000000000000000000000000400000000001003000000101000000000000901000000312000000000000000000000000000000000000034220800210101121100000023000000000000000000000000000000000100000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGATT.........................................................................................................251128.00128000000000000000000000000000000000000100000001000000000000000000000000000000000000000000000000010000002000300000000001000000101001000000000000000202007000000000000010110100010201010000005000000010000000000000000200011001101000000000000000001001100000100012004110210000001311151120641200000210010010102000201018200201700000000420
droSim2
AAA------------AAGTA---------------AAACC-GATG-------------------------------------CAAA-GTT-A--GCAGCA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACAAAGCTAACAGGCACCAGTGAAATA-------TAATAAAAATATTAA--CAATATT--AT---------------GTGT--------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCG............................................................................................................22123031.0023031283322484562178232342044100000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGA...........................................................................................................23122029.00220291203122995161848679910501622072878125000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGC.............................................................................................................21111186.001118617111393820891132100415000000
................................................................................................................................................................TCACAACCTCCTTGAGTGA...............................................................................................................1919861.00986190002469559138314000000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCG............................................................................................................2115365.0053653347351742381847000039000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAG..............................................................................................................2014925.004925324429101447503006100000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGA...........................................................................................................2214792.0047921233410610840631091162738791114000
................................................................................................................................................................TCACAACCTCCTTGAGTG................................................................................................................1814085.00408539000119392500002000000
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGA...........................................................................................................2112711.0027111301485623843050152682600000
.................................................................................................................................................................CACAACCTCCTTGAGTGA...............................................................................................................1811913.001913200058185200001000000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGC.............................................................................................................2011908.00190819370244165611004000000
..................................................................................................................................................................ACAACCTCCTTGAGTGAGC.............................................................................................................191726.0072630012269500013100000
.................................................................................................................................................................CACAACCTCCTTGAGTGAG..............................................................................................................191715.007151220201557500001000000
....................................................................................................................ACTCACTCAACCTGGGTGTGAT........................................................................................................................................................221644.006444003913541221138300000
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCG............................................................................................................201552.0055230061451800009200000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGT...........................................................................................................231406.004063897340000002001000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAT..........................................................................................................231373.00373340298289430221010000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAT..........................................................................................................241364.003646118411260211212100000
....................................................................................................................ACTCACTCAACCTGGGTGTG..........................................................................................................................................................201259.0025973009117500001000000
....................................................................................................................ACTCACTCAACCTGGGTGTGA.........................................................................................................................................................211243.00243130020817166459100000
....................................................................................................................ACTCACTCAACCTGGGTG............................................................................................................................................................181242.002425000423200001000000
..................................................................................................................................................................ACAACCTCCTTGAGTGAG..............................................................................................................181228.002280000522200001000000
....................................................................................................................ACTCACTCAACCTGGGTGT...........................................................................................................................................................191208.0020810004189000014000000
....................................................................................................................ACTCACTCAACCTGGGTGTGATG.......................................................................................................................................................231145.0014520028199000013101000
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGAT..........................................................................................................221100.001005010472000312300000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAA..........................................................................................................24196.00960003002054748000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGG...........................................................................................................23175.0075701300000001000000
...................................................................................................................................................................CAACCTCCTTGAGTGAGCGA...........................................................................................................20169.0069000206500002000000
...................................................................................................................GACTCACTCAACCTGGGTGTGA.........................................................................................................................................................22167.0067100105151312154100000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGATA.........................................................................................................25142.0042000014100000000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGT.............................................................................................................21140.00401600000022200000000
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGT...........................................................................................................21135.0035350000000000000000
.....................................................................................................................................................................ACCTCCTTGAGTGAGCGT...........................................................................................................18228.5057570000000000000000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAA..........................................................................................................23127.0027000100710405000000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGG...........................................................................................................22125.0025210300000001000000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGT...........................................................................................................22121.0021181020000000000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAC..............................................................................................................20120.0020200000000000000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAC..........................................................................................................24119.0019160000020001000000
...................................................................................................................GACTCACTCAACCTGGGTGTG..........................................................................................................................................................21118.0018110010600000000000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGATA.........................................................................................................24116.0016000011500000000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGC...........................................................................................................23114.0014111100010000000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGA.............................................................................................................21113.001340000008000100000
...................................................................................................................................................................CAACCTCCTTGAGTGAGCGAT..........................................................................................................21112.0012000101100000000000
.....................................................................................................................................................................ACCTCCTTGAGTGAGCGA...........................................................................................................18111.001100002200007000000
.....................................................................................................................................................................ACCTCCTTGAGTGAGCG............................................................................................................17111.0011000000000011000000
...................................................................................................................................................................CAACCTCCTTGAGTGAGC.............................................................................................................18110.001000001900000000000
....................................................................................................................ACTCACTCAACCTGGGTGTGATGT......................................................................................................................................................2419.00900000800000100000
................................................................................................................................................................TCACAACCTCCTTGAGT.................................................................................................................1718.00800000001016000000
...................................................................................................................GACTCACTCAACCTGGGTG............................................................................................................................................................1917.00700002500000000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAGG.........................................................................................................2516.00600000000006000000
...................................................................................................................................................................CAACCTCCTTGAGTGAGCGATA.........................................................................................................2216.00600000600000000000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCA............................................................................................................2116.00660000000000000000
.......................................................................................................................................................................CTCCTTGAGTGAGCGA...........................................................................................................1616.00600000000006000000
....................................................................................................................ACTCACTCAACCTGGGTGTGT.........................................................................................................................................................2115.00540000000001000000
........................................................................................................................................................................TCCTTGAGTGAGCGA...........................................................................................................1515.00500000000005000000
...................................................................................................................................................................CAACCTCCTTGAGTGAGCG............................................................................................................1915.00500000400001000000
.....................................................................................................................................................................ACCTCCTTGAGTGAGCGG...........................................................................................................1815.00550000000000000000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCC............................................................................................................2115.00550000000000000000
........................................................................................................................ACTCAACCTGGGTGTGATG.......................................................................................................................................................1915.00500000000004100000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCA............................................................................................................2215.00530000000002000000
.......................................................................................................................CACTCAACCTGGGTGTGAT........................................................................................................................................................1914.00420000000002000000
...................................................................................................................GACTCACTCAACCTGGGT.............................................................................................................................................................1814.00400000400000000000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAC..........................................................................................................2313.00330000000000000000
....................................................................................................................ACTCACTCAACCTGGGTGTGG.........................................................................................................................................................2113.00330000000000000000
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGG...........................................................................................................2113.00320100000000000000
....................................................................................................................................................................AACCTCCTTGAGTGAGCG............................................................................................................1813.00300000100002000000
....................................................................................................................................................................AACCTCCTTGAGTGAGCGA...........................................................................................................1913.00300000200001000000
................................................................................................................................................................TCACAACCTCCTTGA...................................................................................................................1513.00300000003000000000
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGATA.........................................................................................................2313.00300001200000000000
.......................................................................................................................................................................CTCCTTGAGTGAGCG............................................................................................................1513.00300000000003000000
...............................................................................................................................................................ATCACAACCTCCTTGAGTGAGCGA...........................................................................................................2413.00300000200000100000
......................................................................................................................................................................CCTCCTTGAGTGAGCG............................................................................................................1613.00300000000003000000
...................................................................................................................GACTCACTCAACCTGGGTGT...........................................................................................................................................................2013.00300001100001000000
.................................................................................................................................................................CACAACCTCCTTGAGTGAC..............................................................................................................1913.00330000000000000000
........................................................................................................................ACTCAACCTGGGTGTGAT........................................................................................................................................................1812.00200000000002000000
....................................................................................................................ACTCACTCAACCTGGGT.............................................................................................................................................................1712.00200000000002000000
..........................................................................................................................TCAACCTGGGTGTGAT........................................................................................................................................................1612.00200000000002000000
...........................................................................................................................................TTATTT-CGATATGGTATCCA..................................................................................................................................2012.00200000001010000000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAGG.........................................................................................................2412.00200000000002000000
.......................................................................................................................CACTCAACCTGGGTGTGA.........................................................................................................................................................1812.00200000000002000000
....................................................................................................................ACTCACTCAACCTGGGTGTT..........................................................................................................................................................2012.00200000000002000000
..........................................................................................................................................GTTATTT-CGATATGGTAT.....................................................................................................................................1812.00220000000000000000
....................................................................................................................ACTCACTCAACCTGG...............................................................................................................................................................1512.00200000010001000000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAG..........................................................................................................2312.00220000000000000000
.........................................................................................................................................TGTTATTT-CGATATGGTATCCATC................................................................................................................................2412.00200000002000000000
.................................................................................................................................................................CACAACCTCCTTGAGT.................................................................................................................1612.00200000000011000000
......................................................................................................................TCACTCAACCTGGGTGTGATG.......................................................................................................................................................2112.00200000200000000000
.....................................................................................................................CTCACTCAACCTGGGTGTGAT........................................................................................................................................................2112.00200020000000000000
...............................................................................................................................................................ATCACAACCTCCTTGAGTGAGC.............................................................................................................2212.00200000200000000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCAT...........................................................................................................2312.00210000000001000000
....................................................................................................................ACTCACTCAACCTGGGTGTGATGA......................................................................................................................................................2412.00200000001010000000
.........................................................................................................................CTCAACCTGGGTGTGATG.......................................................................................................................................................1812.00200000000002000000
...............................................................................................................................................................ATCACAACCTCCTTGAGTGAGCG............................................................................................................2312.00200000200000000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGG.............................................................................................................2112.00220000000000000000
................................................................................................................................................................TCACAACCTCCTTGAGTT................................................................................................................1811.00110000000000000000
............................................................................................................................AACCTGGGTGTGATG.......................................................................................................................................................1511.00100000000001000000
...............................................................................................................................................................ATCACAACCTCCTTGAGTGAG..............................................................................................................2111.00110000000000000000
.....................................................................................................................................................................ACCTCCTTGAGTGAGC.............................................................................................................1611.00100000000001000000
...............................................................................................................................................................ATCACAACCTCCTTGAGT.................................................................................................................1811.00100000100000000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGTA..........................................................................................................2411.00110000000000000000
..................................................................................................................................................................ACAACCTCCTTGAGTGA...............................................................................................................1711.00100000000001000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGACT.........................................................................................................2511.00101000000000000000
.........................................................................................................................................TGTTATTT-CGATATGGTATCCA..................................................................................................................................2211.00100000100000000000
......................................................................................................................TCACTCAACCTGGGTGTGAT........................................................................................................................................................2011.00100000100000000000
...................................................................................................................GACTCACTCAACCTGGGTGTGG.........................................................................................................................................................2211.00110000000000000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAGGT........................................................................................................2611.00100000000001000000
...................................................................................................................GACTCACTCAACCTGGGTGTGT.........................................................................................................................................................2211.00110000000000000000
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGAC..........................................................................................................2211.00100000000001000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGACC.........................................................................................................2511.00110000000000000000
....................................................................................................................ACTCACTCAACCTGGGTGTGATT.......................................................................................................................................................2311.00100010000000000000
....................................................................................................................ACTCACTCAACCTGGGTGC...........................................................................................................................................................1911.00100000000001000000
droSec2
AAA------------AAGTG---------------AAACC-GATG-------------------------------------CAAA-GTT-A--GCAGCA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAGCTAACTGGCACCAGTGTAATA-------CAATAAAA-----------------------------------------------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
................................................................................................................................................................TCACAACCTCCTTGAGTGAGC.............................................................................................................21153140.005314028450424052112
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCG............................................................................................................22114574.00145741356127944311496
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGA...........................................................................................................2317954.007954201693016333375
................................................................................................................................................................TCACAACCTCCTTGAGTGAG..............................................................................................................2015784.0057842980165659
.................................................................................................................................................................CACAACCTCCTTGAGTGAGC.............................................................................................................2014001.0040014479123866
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCG............................................................................................................2112610.002610253213332111
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGA...........................................................................................................2212047.0020475732291981047
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGT...........................................................................................................2311679.0016794410331529
................................................................................................................................................................TCACAACCTCCTTGAGTGA...............................................................................................................191898.00898415888
..................................................................................................................................................................ACAACCTCCTTGAGTGAGC.............................................................................................................191712.00712825697
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGA...........................................................................................................211711.0071121762105327
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGT...........................................................................................................221351.003514210326
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCG............................................................................................................201335.0033541304260
.................................................................................................................................................................CACAACCTCCTTGAGTGAG..............................................................................................................191280.00280301276
....................................................................................................................ACTCACTCAACCTGGGTGTGAT........................................................................................................................................................221226.0022619911214
...................................................................................................................GACTCACTCAACCTGGGTGT...........................................................................................................................................................201204.00204161196
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAT..........................................................................................................231181.0018132272399
................................................................................................................................................................TCACAACCTCCTTGAGTGAGA.............................................................................................................211161.00161102158
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAT..........................................................................................................241152.0015239241772
....................................................................................................................ACTCACTCAACCTGGGTGTGATG.......................................................................................................................................................231111.0011198067
....................................................................................................................ACTCACTCAACCTGGGTGT...........................................................................................................................................................191102.0010250295
....................................................................................................................ACTCACTCAACCTGGGTGTGT.........................................................................................................................................................211100.0010032095
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGC...........................................................................................................23199.009918288
....................................................................................................................ACTCACTCAACCTGGGTGTGA.........................................................................................................................................................21196.0096651129
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAA..........................................................................................................24195.009515111455
..................................................................................................................................................................ACAACCTCCTTGAGTGAG..............................................................................................................18160.006010059
................................................................................................................................................................TCACAACCTCCTTGAGTGAGT.............................................................................................................21152.005211050
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCA............................................................................................................22146.004602143
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGT...........................................................................................................21145.004521141
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAA..........................................................................................................23145.0045133128
....................................................................................................................ACTCACTCAACCTGGGTGTG..........................................................................................................................................................20138.003832105
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGAT..........................................................................................................22131.003191714
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGG...........................................................................................................23129.002961517
.................................................................................................................................................................CACAACCTCCTTGAGTGA...............................................................................................................18123.002300023
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCT............................................................................................................22122.002211020
...................................................................................................................GACTCACTCAACCTGGGTGTGA.........................................................................................................................................................22117.00178036
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGC...........................................................................................................22115.001511013
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCC............................................................................................................22115.001511013
...................................................................................................................................................................CAACCTCCTTGAGTGAGCGA...........................................................................................................20112.001211001
.....................................................................................................................CTCACTCAACCTGGGTGTGAT........................................................................................................................................................21112.001212000
....................................................................................................................ACTCACTCAACCTGGGTGTGATT.......................................................................................................................................................23111.001110001
................................................................................................................................................................TCACAACCTCCTTGAGTGAA..............................................................................................................2019.0090009
.........................................................................................................................................TGTTATTT-CGATATGGTATCCATC................................................................................................................................2419.0091035
................................................................................................................................................................TCACAACCTCCTTGAGTGAGG.............................................................................................................2119.0091008
.................................................................................................................................................................CACAACCTCCTTGAGTGAGA.............................................................................................................2018.0080008
.........................................................................................................................CTCAACCTGGGTGTGATG.......................................................................................................................................................1818.0082006
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGAA..........................................................................................................2218.0083005
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGG...........................................................................................................2217.0071006
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGATT.........................................................................................................2417.0070106
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAG..........................................................................................................2417.0071006
...................................................................................................................................................................CAACCTCCTTGAGTGAGCG............................................................................................................1917.0076001
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGATT.........................................................................................................2516.0060006
................................................................................................................................................................TCACAACCTCCTTGAGTG................................................................................................................1816.0062013
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAC..........................................................................................................2416.0061122
.................................................................................................................................................................CACAACCTCCTTGAGTGAGT.............................................................................................................2015.0050005
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCA............................................................................................................2115.0050104
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCT............................................................................................................2115.0054001
...................................................................................................................GACTCACTCAACCTGGGTGTG..........................................................................................................................................................2115.0053101
....................................................................................................................ACTCACTCAACCTGGGTGTT..........................................................................................................................................................2014.0040004
................................................................................................................................................................TCACAACCTCCTTGAGTGT...............................................................................................................1914.0040004
...................................................................................................................................................................CAACCTCCTTGAGTGAGCGAT..........................................................................................................2114.0041012
................................................................................................................................................................TCACAACCTCCTTGAGTGAT..............................................................................................................2014.0040004
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCAT...........................................................................................................2314.0040004
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAC..........................................................................................................2314.0041111
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCC............................................................................................................2114.0040004
...............................................................................................................................................................ATCACAACCTCCTTGAGTGAGCGA...........................................................................................................2414.0044000
...............................................................................................................................................................ATCACAACCTCCTTGAGTGAG..............................................................................................................2114.0041003
droYak3
AAA------------AAGTG---------------AAACC-GATG-------------------------------------CAAA-GTT-A--GCAGCA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAACTAACTGGCACCAGTGAGTTA-------TAATAAAA-----------------------------------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
................................................................................................................................................................TCACAACCTCCTTGAGTGAGC.............................................................................................................21117973.001797330357176225162116731650001
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCG............................................................................................................22117402.001740267215141154485103333100000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGA...........................................................................................................2317758.007758262571297741393311525500126
................................................................................................................................................................TCACAACCTCCTTGAGTGAG..............................................................................................................2014710.00471033933014483105280000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCG............................................................................................................2113563.003563500360717351907530000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGA...........................................................................................................2212721.0027212982842114821268530008
.................................................................................................................................................................CACAACCTCCTTGAGTGAGC.............................................................................................................2012028.0020282287305191378190000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGT...........................................................................................................2311860.0018606981204821196300000
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGA...........................................................................................................211729.007294182187127375160000
................................................................................................................................................................TCACAACCTCCTTGAGTGA...............................................................................................................191422.004220120013727300000
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCG............................................................................................................201281.00281038105818130000
..................................................................................................................................................................ACAACCTCCTTGAGTGAGC.............................................................................................................191271.0027104107718720000
....................................................................................................................ACTCACTCAACCTGGGTGTGAT........................................................................................................................................................221269.002693157793111600000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAT..........................................................................................................231260.002609552913712090000
....................................................................................................................ACTCACTCAACCTGGGTGTGATG.......................................................................................................................................................231228.0022811427126510000
.................................................................................................................................................................CACAACCTCCTTGAGTGAG..............................................................................................................191210.002101519105511910000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAT..........................................................................................................241203.002031838273288450000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGT...........................................................................................................221191.00191113104013150000
....................................................................................................................ACTCACTCAACCTGGGTGTGA.........................................................................................................................................................211146.0014611165081600000
...................................................................................................................GACTCACTCAACCTGGGTGT...........................................................................................................................................................201120.001200300417510000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGC...........................................................................................................231102.00102211088910000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAA..........................................................................................................24184.008401031135160000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCT............................................................................................................22173.007301110213910000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGT.............................................................................................................21172.00721100195010000
....................................................................................................................ACTCACTCAACCTGGGTGT...........................................................................................................................................................19165.00650300283400000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGA.............................................................................................................21163.00632000194200000
....................................................................................................................ACTCACTCAACCTGGGTGTG..........................................................................................................................................................20157.00571137502200000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCA............................................................................................................22151.005101100122800000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGC...........................................................................................................22151.0051000024810000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAA..........................................................................................................23141.0041080092310000
..................................................................................................................................................................ACAACCTCCTTGAGTGAG..............................................................................................................18140.00400110112700000
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGT...........................................................................................................21139.0039500072610000
...................................................................................................................GACTCACTCAACCTGGGTGTGA.........................................................................................................................................................22132.0032117500900000
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGAT..........................................................................................................22132.0032231604520000
....................................................................................................................ACTCACTCAACCTGGGTGTGT.........................................................................................................................................................21127.0027120091500000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGG...........................................................................................................23124.0024421031400000
...................................................................................................................................................................CAACCTCCTTGAGTGAGCGA...........................................................................................................20120.0020012101600000
....................................................................................................................ACTCACTCAACCTGGGTGTGAC........................................................................................................................................................22119.0019001900000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAC..........................................................................................................24119.001950900500000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCC............................................................................................................22118.0018020031210000
...................................................................................................................GACTCACTCAACCTGGGTGTG..........................................................................................................................................................21118.0018111300300000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAG..........................................................................................................24117.0017000021320000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCT............................................................................................................21116.0016000011500000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGATT.........................................................................................................24115.001514003610000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGG...........................................................................................................22115.001552001700000
................................................................................................................................................................TCACAACCTCCTTGAGTGAT..............................................................................................................20112.0012000011100000
................................................................................................................................................................TCACAACCTCCTTGAGTG................................................................................................................18112.001253001300000
....................................................................................................................ACTCACTCAACCTGGGTGTGATT.......................................................................................................................................................23111.001108300000000
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGC...........................................................................................................21111.001100101900000
.....................................................................................................................CTCACTCAACCTGGGTGTGA.........................................................................................................................................................20110.0010010000000000
...................................................................................................................................................................CAACCTCCTTGAGTGAGCGAT..........................................................................................................2119.00901002510000
.................................................................................................................................................................CACAACCTCCTTGAGTGAGA.............................................................................................................2019.00910000710000
................................................................................................................................................................TCACAACCTCCTTGAGTGATT.............................................................................................................2119.00900000900000
.........................................................................................................................................TGTTATTT-CGATATGGTATCCATC................................................................................................................................2418.00801700000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGATT.........................................................................................................2518.00802100500000
...........................................................................................................................................TTATTT-CGATATGGTATCCA..................................................................................................................................2017.00702410000000
................................................................................................................................................................TCACAACCTCCTTGAGTGAC..............................................................................................................2017.00740000300000
droEre2
AAAA-----------AAGTG---------------AAGCC-GATG-------------------------------------CAAA-GTT-A--GCAGCA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAACTAACTAC-------------------------AAA-----------ATATCACAAAAAGTGAAGAGATACGTAC--------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
................................................................................................................................................................TCACAACCTCCTTGAGTGAGC.............................................................................................................21177273.007727351642745842524686829
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCG............................................................................................................22122250.0022250253118717233779117170
................................................................................................................................................................TCACAACCTCCTTGAGTGAG..............................................................................................................20110158.00101588211714021681450
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGA...........................................................................................................2319597.0095972844782045667663029769
.................................................................................................................................................................CACAACCTCCTTGAGTGAGC.............................................................................................................2014335.004335972561113135430
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCG............................................................................................................2113964.00396440031047323422770
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGA...........................................................................................................2213286.003286998138071327411756
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGT...........................................................................................................2311487.001487511319111210030
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGA...........................................................................................................211936.00936267524531023140
................................................................................................................................................................TCACAACCTCCTTGAGTGA...............................................................................................................191843.008431701050127090
..................................................................................................................................................................ACAACCTCCTTGAGTGAGC.............................................................................................................191800.0080010067027210
....................................................................................................................ACTCACTCAACCTGGGTGTGAT........................................................................................................................................................221402.00402305181804534
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCG............................................................................................................201399.003994501220192130
................................................................................................................................................................TCACAACCTCCTTGAGTGAGA.............................................................................................................211398.003980032013641
.................................................................................................................................................................CACAACCTCCTTGAGTGAG..............................................................................................................191368.003685052063050
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAT..........................................................................................................231346.003465146124513053
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGT...........................................................................................................221215.00215120330201500
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAT..........................................................................................................241186.00186237290288415
....................................................................................................................ACTCACTCAACCTGGGTGTGATG.......................................................................................................................................................231162.001621328300136
...................................................................................................................GACTCACTCAACCTGGGTGT...........................................................................................................................................................201157.001573018171280
....................................................................................................................ACTCACTCAACCTGGGTGTGA.........................................................................................................................................................211151.001511141901260
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAA..........................................................................................................241129.0012916023020700
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCT............................................................................................................221104.00104502305710
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGC...........................................................................................................231102.00102303313584
....................................................................................................................ACTCACTCAACCTGGGTGT...........................................................................................................................................................19193.0093701004720
..................................................................................................................................................................ACAACCTCCTTGAGTGAG..............................................................................................................18182.0082002000620
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCA............................................................................................................22180.0080803403350
................................................................................................................................................................TCACAACCTCCTTGAGTGAGT.............................................................................................................21175.0075202200510
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAA..........................................................................................................23165.0065701607350
....................................................................................................................ACTCACTCAACCTGGGTGTGT.........................................................................................................................................................21151.005130800400
................................................................................................................................................................TCACAACCTCCTTGAGTGAT..............................................................................................................20148.004800500430
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGG...........................................................................................................23143.004321301360
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCC............................................................................................................22142.004202810310
....................................................................................................................ACTCACTCAACCTGGGTGTG..........................................................................................................................................................20141.004132010170
.................................................................................................................................................................CACAACCTCCTTGAGTGA...............................................................................................................18136.003610000350
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGAT..........................................................................................................22136.003680805150
...................................................................................................................GACTCACTCAACCTGGGTGTGA.........................................................................................................................................................22132.0032140300150
.....................................................................................................................CTCACTCAACCTGGGTGTGAT........................................................................................................................................................21124.002423000010
................................................................................................................................................................TCACAACCTCCTTGAGTG................................................................................................................18124.002410000230
..................................................................................................................................................................ACAACCTCCTTGAGTGAGCGT...........................................................................................................21123.002300003200
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCT............................................................................................................21122.002270200130
...............................................................................................................................................................ATCACAACCTCCTTGAGTGAGCGA...........................................................................................................24122.002220000020
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAG..........................................................................................................24118.001800300150
.................................................................................................................................................................CACAACCTCCTTGAGTGAGA.............................................................................................................20115.001500100140
...................................................................................................................GACTCACTCAACCTGGGTGTG..........................................................................................................................................................21114.00146040040
...................................................................................................................................................................CAACCTCCTTGAGTGAGCGA...........................................................................................................20114.001411000030
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGAC..........................................................................................................24113.00134110043
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGATT.........................................................................................................24113.00133020170
.........................................................................................................................................TGTTATTT-CGATATGGTATCCATC................................................................................................................................24111.00111401050
....................................................................................................................ACTCACTCAACCTGGGTGTGATT.......................................................................................................................................................23110.00107020010
................................................................................................................................................................TCACAACCTCCTTGAGTGAGG.............................................................................................................21110.00101000180
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGC...........................................................................................................22110.00100091000
................................................................................................................................................................TCACAACCTCCTTGAGTGAC..............................................................................................................20110.00100040060
...................................................................................................................................................................CAACCTCCTTGAGTGAGC.............................................................................................................18110.00100000190
................................................................................................................................................................TCACAACCTCCTTGAGTGAGCGATT.........................................................................................................2519.0092000160
.................................................................................................................................................................CACAACCTCCTTGAGTGAGCGAG..........................................................................................................2319.0091030050
...............................................................................................................................................................ATCACAACCTCCTTGAGTGAGC.............................................................................................................2218.0083000050
...................................................................................................................................................................CAACCTCCTTGAGTGAGCG............................................................................................................1917.0076010000

Generated: 10/20/2015 at 10:16 PM