ID:

dpe-mir-306

 Coordinate:

scaffold_1:9894939-9895018 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intron

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-42.0 -42.0 -42.0

Flybase annnotation

intron [Dper\GL19651-in]; utr5 [utr5_plus_2209]; pre_miRNA [Dper\mir-306-RM]; miRNA [Dper\miR-306-RA]

No Repeatable elements found

Sense Strand Reads

ATTTGATGCGGGCGCCTTCGAGTGTTTATCGAGTGATTTATCTACAAGCACACTTTGCCGGCTCAGGTACTTAGTGACTCTCAATGCTTTCGACATCTTGAGAGTCTCTCTGTGCCTGCACTGGCGGTGGTGCAACTGCAACGATTAAGGGTGTTCCTAATAAGTGTTATATTTAGAGTG

***********************************************((((...(((((((..(((((((..((.(((((((((((.......)))..)))))))).))..)))))))..)))))))..))))...******************************************** 		Read size # Mismatch Hit Count Total Norm Total M042

female body

 M021

embryo

 V042

embryo

 V050

head

 V057

head

 V111

male body
..............................................................TCAGGTACTTAGTGACTCTCAA................................................................................................ 22 0 1 49916.00 49916 47429 736 913 428 344 66
..............................................................TCAGGTACTTAGTGACTCTCA................................................................................................. 21 0 1 45389.00 45389 41884 1114 1607 389 284 111
...............................................................CAGGTACTTAGTGACTCTCAA................................................................................................ 21 0 1 4627.00 4627 4627 0 0 0 0 0
...............................................................CAGGTACTTAGTGACTCTCA................................................................................................. 20 0 1 4043.00 4043 4037 0 4 1 1 0
..............................................................TCAGGTACTTAGTGACTCTCAAA............................................................................................... 23 1 1 3874.00 3874 3655 120 81 11 7 0
..............................................................TCAGGTACTTAGTGACTCTC.................................................................................................. 20 0 1 3161.00 3161 1792 890 79 206 138 56
..............................................................TCAGGTACGTAGTGACTCTCAA................................................................................................ 22 1 1 1717.00 1717 1717 0 0 0 0 0
..............................................................TCAGGTACGTAGTGACTCTCA................................................................................................. 21 1 1 1666.00 1666 1665 0 0 0 1 0
..............................................................TCAGGTACTTAGTGACTCTCAAAA.............................................................................................. 24 2 1 764.00 764 678 65 21 0 0 0
..............................................................TCAGGTACTTAGTGACTCT................................................................................................... 19 0 1 759.00 759 201 502 9 26 18 3
..............................................................TCAGGTACATAGTGACTCTCAA................................................................................................ 22 1 1 756.00 756 755 0 1 0 0 0
..............................................................TCAGGTACATAGTGACTCTCA................................................................................................. 21 1 1 712.00 712 712 0 0 0 0 0
..............................................................TCAGGTACTTAGTGACTCTCAC................................................................................................ 22 1 1 610.00 610 537 42 10 15 5 1
..............................................................TCAGGTACCTAGTGACTCTCA................................................................................................. 21 1 1 365.00 365 363 1 0 0 1 0
..............................................................TCAGGTACCTAGTGACTCTCAA................................................................................................ 22 1 1 352.00 352 350 1 0 0 1 0
...............................................................CAGGTACTTAGTGACTCTCAAA............................................................................................... 22 1 1 348.00 348 348 0 0 0 0 0
..............................................................TCAGGTACTTAGTGACTCTCAAAAA............................................................................................. 25 3 1 259.00 259 228 26 5 0 0 0
..............................................................TCAGGTACTTAGTGACTCTCAT................................................................................................ 22 1 1 245.00 245 234 6 4 0 1 0
..............................................................TCAGGTACTTAGTGACTCTCAAT............................................................................................... 23 0 1 232.00 232 218 6 7 1 0 0
................................................................AGGTACTTAGTGACTCTCAA................................................................................................ 20 0 1 226.00 226 217 0 1 5 3 0
................................................................AGGTACTTAGTGACTCTCA................................................................................................. 19 0 1 205.00 205 176 0 17 10 2 0
...............................................................CAGGTACTGAGTGACTCTCAA................................................................................................ 21 1 1 190.00 190 190 0 0 0 0 0
...............................................................CAGGTACTTAGTGACTCTC.................................................................................................. 19 0 1 166.00 166 165 1 0 0 0 0
...................................................................................................GAGAGTCTCTCTGTGCCTGCAC........................................................... 22 0 1 161.00 161 138 8 9 0 6 0
...............................................................CAGGTACTGAGTGACTCTCA................................................................................................. 20 1 1 159.00 159 159 0 0 0 0 0
..............................................................TCAGGTACTTAGTGACTCTCAG................................................................................................ 22 1 1 152.00 152 150 1 1 0 0 0
..............................................................GCAGGTACTTAGTGACTCTCA................................................................................................. 21 1 1 144.00 144 143 0 0 0 1 0
..............................................................GCAGGTACTTAGTGACTCTCAA................................................................................................ 22 1 1 131.00 131 131 0 0 0 0 0
..............................................................TCAGGTACGTAGTGACTCTCAAA............................................................................................... 23 2 1 131.00 131 131 0 0 0 0 0
...................................................................................................GAGAGTCTCTCTGTGCCTGCA............................................................ 21 0 1 111.00 111 107 0 1 2 1 0
...............................................................CAGGTACTAAGTGACTCTCAA................................................................................................ 21 1 1 86.00 86 86 0 0 0 0 0
..............................................................TCAGGTACTTAGTGACTCTCACA............................................................................................... 23 2 1 85.00 85 47 32 6 0 0 0
...............................................................CAGGTACTAAGTGACTCTCA................................................................................................. 20 1 1 81.00 81 81 0 0 0 0 0
...............................................................CAGGTACTTAGTGACTCTCAAAA.............................................................................................. 23 2 1 76.00 76 76 0 0 0 0 0
..............................................................TCAGGTACGTAGTGACTCTC.................................................................................................. 20 1 1 71.00 71 71 0 0 0 0 0
..............................................................TCAGGTACTTAGTGACTCTCAAC............................................................................................... 23 1 1 70.00 70 51 15 4 0 0 0
...............................................................CAGGTACTTAGTGACTCTCAC................................................................................................ 21 1 1 68.00 68 68 0 0 0 0 0
..............................................................TCAGGTACTTAGTGACTCTCACC............................................................................................... 23 2 1 66.00 66 8 55 2 1 0 0
..............................................................TCAGGGACTTAGTGACTCTCA................................................................................................. 21 1 1 64.00 64 17 8 12 11 16 0
..............................................................TCAGGTACATAGTGACTCTCAAA............................................................................................... 23 2 1 57.00 57 57 0 0 0 0 0
..............................................................TCAGGGACTTAGTGACTCTCAA................................................................................................ 22 1 1 54.00 54 17 7 8 8 12 2
..............................................................TCAGGTACTTAGGGACTCTCAA................................................................................................ 22 1 1 45.00 45 40 1 1 0 3 0
..............................................................TCAGGTACTTAGTGACTCTCT................................................................................................. 21 1 1 44.00 44 8 19 5 5 2 5
..............................................................ACAGGTACTTAGTGACTCTCA................................................................................................. 21 1 1 43.00 43 42 0 1 0 0 0
...............................................................CAGGTACTCAGTGACTCTCAA................................................................................................ 21 1 1 40.00 40 40 0 0 0 0 0
.............................................................CTCAGGTACTTAGTGACTCTCAA................................................................................................ 23 0 1 40.00 40 40 0 0 0 0 0
..............................................................TCAGGTACTTAGCGACTCTCAA................................................................................................ 22 1 1 39.00 39 33 1 4 1 0 0
..............................................................TCAGGTACTTAGTGACTCTCCA................................................................................................ 22 1 1 39.00 39 0 1 32 3 3 0
..............................................................ACAGGTACTTAGTGACTCTCAA................................................................................................ 22 1 1 38.00 38 36 0 0 0 2 0
..............................................................TCAGGTACTTAGTGACTCTCACT............................................................................................... 23 1 1 36.00 36 14 20 2 0 0 0
.............................................................GTCAGGTACTTAGTGACTCTCAA................................................................................................ 23 1 1 34.00 34 34 0 0 0 0 0
..............................................................TCAGGTACTTAGTTACTCTCAA................................................................................................ 22 1 1 34.00 34 29 1 0 1 3 0
..............................................................TCAGTTACTTAGTGACTCTCAA................................................................................................ 22 1 1 34.00 34 28 6 0 0 0 0
..............................................................TCAGGTACGTAGTGACTCTCAC................................................................................................ 22 2 1 34.00 34 34 0 0 0 0 0
..............................................................TCAGGCACTTAGTGACTCTCAA................................................................................................ 22 1 1 33.00 33 14 1 1 8 9 0
...................................................................................................GAGAGTCTCTCTGTGCCTGC............................................................. 20 0 1 33.00 33 32 0 0 0 0 1
..............................................................TCAGGTACTTAGGGACTCTCA................................................................................................. 21 1 1 32.00 32 26 4 1 0 1 0
..............................................................TCAGGTACATAGTGACTCTC.................................................................................................. 20 1 1 32.00 32 32 0 0 0 0 0
..............................................................TCATGTACTTAGTGACTCTCAA................................................................................................ 22 1 1 31.00 31 24 6 0 1 0 0
..............................................................TCAGGTACTTAGTGACTCTCG................................................................................................. 21 1 1 31.00 31 12 17 2 0 0 0
..............................................................TCAGGTACCTAGTGACTCTCAAA............................................................................................... 23 2 1 30.00 30 30 0 0 0 0 0
...............................................................CAGGTACTCAGTGACTCTCA................................................................................................. 20 1 1 30.00 30 30 0 0 0 0 0
..............................................................TCAGGTACTTAGTGACTCTCAAG............................................................................................... 23 1 1 30.00 30 29 1 0 0 0 0
..............................................................TCAGGCACTTAGTGACTCTCA................................................................................................. 21 1 1 29.00 29 11 0 4 3 11 0
..............................................................TCAGGTACTTAGTTACTCTCA................................................................................................. 21 1 1 29.00 29 19 6 2 0 1 1
.............................................................TTCAGGTACTTAGTGACTCTCAA................................................................................................ 23 1 1 29.00 29 29 0 0 0 0 0
..............................................................TCAGGTACTTAGTGACTCTCATT............................................................................................... 23 1 1 28.00 28 22 5 1 0 0 0
..............................................................TCAGGTACTTAGTGACTCTCC................................................................................................. 21 1 1 27.00 27 5 7 10 3 1 1
..............................................................TCAGGTACGTAGTGACTCTCAAAA.............................................................................................. 24 3 1 27.00 27 27 0 0 0 0 0
..............................................................TCAGGTACTTAGTGACTCC................................................................................................... 19 1 1 26.00 26 1 25 0 0 0 0
..............................................................TCAGGTACTTAGTGACCCTCAA................................................................................................ 22 1 1 26.00 26 20 1 3 1 1 0
...................................................................................................GAGAGTCTCTCTGTGCCTGCAA........................................................... 22 1 1 25.00 25 25 0 0 0 0 0
..............................................................TCAGGTACTTAGAGACTCTCAA................................................................................................ 22 1 1 24.00 24 17 2 3 1 1 0
..............................................................CCAGGTACTTAGTGACTCTCA................................................................................................. 21 1 1 24.00 24 21 1 2 0 0 0
.................................................................GGTACTTAGTGACTCTCA................................................................................................. 18 0 1 23.00 23 23 0 0 0 0 0
.................................................................GGTACTTAGTGACTCTCAA................................................................................................ 19 0 1 23.00 23 23 0 0 0 0 0
..............................................................CCAGGTACTTAGTGACTCTCAA................................................................................................ 22 1 1 23.00 23 21 0 0 2 0 0
..............................................................TCAGGTACTTAGCGACTCTCA................................................................................................. 21 1 1 22.00 22 15 2 3 1 1 0
...............................................................CAGGTACTTAGTGACTCTCAAAAA............................................................................................. 24 3 1 22.00 22 22 0 0 0 0 0
....................................................................................................AGAGTCTCTCTGTGCCTGCAC........................................................... 21 0 1 22.00 22 22 0 0 0 0 0
...............................................................CAGGTACTTAGTGACTCTCAAT............................................................................................... 22 0 1 21.00 21 21 0 0 0 0 0
.............................................................CTCAGGTACTTAGTGACTCTCA................................................................................................. 22 0 1 21.00 21 19 0 2 0 0 0
..............................................................TCAGGTACTTAGTGACTCTCAATT.............................................................................................. 24 1 1 21.00 21 20 0 1 0 0 0
...............................................................GAGGTACTTAGTGACTCTCAA................................................................................................ 21 1 1 20.00 20 20 0 0 0 0 0
.............................................................GTCAGGTACTTAGTGACTCTCA................................................................................................. 22 1 1 20.00 20 20 0 0 0 0 0
..............................................................TCAGGTACTTAGTGACTCCCA................................................................................................. 21 1 1 20.00 20 14 1 4 1 0 0
..............................................................TCAGGTACTTAGTGACTC.................................................................................................... 18 0 1 20.00 20 5 14 0 1 0 0
..............................................................TCAGGTACTTAGTGACTCCCAA................................................................................................ 22 1 1 20.00 20 14 4 2 0 0 0
..............................................................TCAGTTACTTAGTGACTCTCA................................................................................................. 21 1 1 20.00 20 18 0 2 0 0 0
.............................................................TTCAGGTACTTAGTGACTCTCA................................................................................................. 22 1 1 20.00 20 20 0 0 0 0 0
..............................................................TCAGGTACTTAGTGGCTCTCAA................................................................................................ 22 1 1 19.00 19 17 0 0 2 0 0
...............................................................CAGGTACTTAGTGACTCT................................................................................................... 18 0 1 19.00 19 18 1 0 0 0 0
..............................................................TCAGGTACTTAGTGGCTCTCA................................................................................................. 21 1 1 19.00 19 14 0 4 1 0 0
................................................................AGGTACTTAGTGACTCTCAAA............................................................................................... 21 1 1 19.00 19 19 0 0 0 0 0
..............................................................TCGGGTACTTAGTGACTCTCA................................................................................................. 21 1 1 19.00 19 15 2 2 0 0 0
..............................................................TCAGGTACTTAGTGACCCTCA................................................................................................. 21 1 1 18.00 18 15 3 0 0 0 0
...............................................................TCAGTACTTAGTGACTCTCAA................................................................................................ 21 3 1 18.00 18 17 1 0 0 0 0
..............................................................TCAGGTACTTAGAGACTCTCA................................................................................................. 21 1 1 18.00 18 10 6 2 0 0 0
..............................................................TCAGGTACTTACTGACTCTCAA................................................................................................ 22 1 1 18.00 18 17 1 0 0 0 0
...............................................................CAGGTACTTAGTGACTCTCAT................................................................................................ 21 1 1 17.00 17 17 0 0 0 0 0
..............................................................TCGGGTACTTAGTGACTCTCAA................................................................................................ 22 1 1 17.00 17 16 0 0 0 1 0
.............................................................ATCAGGTACTTAGTGACTCTCAA................................................................................................ 23 1 1 17.00 17 16 0 0 0 1 0
..............................................................TCAGGTGCTTAGTGACTCTCA................................................................................................. 21 1 1 17.00 17 12 2 2 0 1 0
..............................................................TCAGGTACTTACTGACTCTCA................................................................................................. 21 1 1 17.00 17 15 2 0 0 0 0
..............................................................TCAGGGACTTAGTGACTCTC.................................................................................................. 20 1 1 16.00 16 0 7 1 1 7 0
..............................................................TCAGGAACTTAGTGACTCTCA................................................................................................. 21 1 1 16.00 16 10 0 2 1 3 0
..............................................................TCAGGTACGTAGTGACTCTCAT................................................................................................ 22 2 1 16.00 16 16 0 0 0 0 0
..............................................................TCAGGAACTTAGTGACTCTCAA................................................................................................ 22 1 1 16.00 16 8 0 2 2 3 1
..............................................................TCATGTACTTAGTGACTCTCA................................................................................................. 21 1 1 16.00 16 13 3 0 0 0 0
..............................................................TCAGGTGCTTAGTGACTCTCAA................................................................................................ 22 1 1 16.00 16 14 0 1 0 0 1
..............................................................TCAGGTACATAGTGACTCTCAAAA.............................................................................................. 24 3 1 15.00 15 15 0 0 0 0 0
................................................................AGGTACTTAGTGACTCTC.................................................................................................. 18 0 1 15.00 15 10 0 0 3 2 0
..............................................................TCAGGTACTTATTGACTCTCA................................................................................................. 21 1 1 15.00 15 12 3 0 0 0 0
.............................................................ATCAGGTACTTAGTGACTCTCA................................................................................................. 22 1 1 14.00 14 13 0 0 0 1 0
..............................................................TCAGGTACTTAATGACTCTCAA................................................................................................ 22 1 1 14.00 14 12 0 1 1 0 0
..............................................................TCAGGTACGTAGGGACTCTCAA................................................................................................ 22 2 1 14.00 14 14 0 0 0 0 0
...............................................................GAGGTACTTAGTGACTCTCA................................................................................................. 20 1 1 14.00 14 14 0 0 0 0 0
..............................................................TCAGGTACTTAGTCACTCTCA................................................................................................. 21 1 1 14.00 14 11 2 1 0 0 0
..............................................................TCAGGTACTTAGTAACTCTCAA................................................................................................ 22 1 1 13.00 13 12 0 1 0 0 0
..............................................................TCAGGTACTTAGTGACTCTAA................................................................................................. 21 1 1 13.00 13 10 0 3 0 0 0
..............................................................TCAGGTACTTAGTGACTCTCAAAT.............................................................................................. 24 2 1 13.00 13 10 3 0 0 0 0
..............................................................TCAGGTACTTAGTCACTCTCAA................................................................................................ 22 1 1 13.00 13 12 0 1 0 0 0
..............................................................TCAGGTACTTAGTGACTCTCGA................................................................................................ 22 1 1 13.00 13 11 0 2 0 0 0
..............................................................TCAGGTACTTAGGGACTCTC.................................................................................................. 20 1 1 13.00 13 0 12 0 0 1 0
..............................................................TCAGGTACCTAGTGACTCTC.................................................................................................. 20 1 1 13.00 13 11 2 0 0 0 0
..................................................................GTACTTAGTGACTCTCAA................................................................................................ 18 0 1 12.00 12 12 0 0 0 0 0
..............................................................TCAGGTACGTAGGGACTCTCA................................................................................................. 21 2 1 12.00 12 12 0 0 0 0 0
..............................................................TAAGGTACTTAGTGACTCTCA................................................................................................. 21 1 1 12.00 12 6 0 1 2 3 0
..............................................................TCAGGTACTTATTGACTCTCAA................................................................................................ 22 1 1 12.00 12 7 4 0 0 1 0
..............................................................TCAGGTACGTAGTGACTCTCAAT............................................................................................... 23 1 1 12.00 12 12 0 0 0 0 0
..............................................................TCAGCTACTTAGTGACTCTCA................................................................................................. 21 1 1 11.00 11 10 1 0 0 0 0
..............................................................TCAGGTACTCAGTGACTCTCAA................................................................................................ 22 1 1 11.00 11 8 0 1 0 2 0
..............................................................TCACGTACTTAGTGACTCTCAA................................................................................................ 22 1 1 11.00 11 11 0 0 0 0 0
..............................................................GCAGGTACTTAGTGACTCTCAAA............................................................................................... 23 2 1 11.00 11 11 0 0 0 0 0
..............................................................TCAGGTACTTAGTGACTCTCACAA.............................................................................................. 24 3 1 11.00 11 9 2 0 0 0 0
..............................................................TTAGGTACTTAGTGACTCTCAA................................................................................................ 22 1 1 10.00 10 7 3 0 0 0 0
..............................................................TCAGGTAATTAGTGACTCTCA................................................................................................. 21 1 1 10.00 10 4 1 1 2 2 0
................................................................AGGTACTTGGTGACTCTCAA................................................................................................ 20 1 1 10.00 10 10 0 0 0 0 0
....................................................................................................AGAGTCTCTCTGTGCCTGCA............................................................ 20 0 1 10.00 10 10 0 0 0 0 0
..............................................................TCAGGTACTTAGTGAATCTCAA................................................................................................ 22 1 1 10.00 10 6 0 2 1 1 0
...............................................................CAGGTACTTAGTGACTCTCAG................................................................................................ 21 1 1 10.00 10 10 0 0 0 0 0
..............................................................TCAGGTACTTTGTGACTCTCAA................................................................................................ 22 1 1 10.00 10 10 0 0 0 0 0
..............................................................TCAGGTACTTAGTGACTCTCAATA.............................................................................................. 24 1 1 10.00 10 10 0 0 0 0 0
..............................................................TCAGGTACTTAGTGACTCTCAACA.............................................................................................. 24 2 1 10.00 10 8 2 0 0 0 0
..............................................................TTAGGTACTTAGTGACTCTCA................................................................................................. 21 1 1 10.00 10 10 0 0 0 0 0
..............................................................TCAGGTACTTAGTGACTCTGAA................................................................................................ 22 1 1 9.00 9 9 0 0 0 0 0
..............................................................TCAGGTACTTAGTGACTCTCAGA............................................................................................... 23 2 1 9.00 9 9 0 0 0 0 0
..............................................................TCAGGTACTTAGTGACTATCA................................................................................................. 21 1 1 9.00 9 2 0 5 1 1 0
..............................................................TCAGGTACTTAGTTACTCTC.................................................................................................. 20 1 1 9.00 9 1 8 0 0 0 0
...............................................................CAGGTACTGAGTGACTCTCAAA............................................................................................... 22 2 1 9.00 9 9 0 0 0 0 0
..............................................................TCAAGTACTTAGTGACTCTCA................................................................................................. 21 1 1 9.00 9 8 0 1 0 0 0
..............................................................TCAGGTACGTAGTGACTCTCAG................................................................................................ 22 2 1 9.00 9 9 0 0 0 0 0
..............................................................TCAGGTACATAGTGACTCTCAC................................................................................................ 22 2 1 9.00 9 9 0 0 0 0 0
..............................................................TCAGGTACTTAGTGACACTCA................................................................................................. 21 1 1 8.00 8 7 0 0 1 0 0
...............................................................CAGGTACTTAGTGACTCTCACA............................................................................................... 22 2 1 8.00 8 8 0 0 0 0 0
...............................................................CAGGTACTTAGTGACTCTCACC............................................................................................... 22 2 1 8.00 8 1 7 0 0 0 0
..............................................................TCAGATACTTAGTGACTCTCA................................................................................................. 21 1 1 8.00 8 5 0 1 2 0 0
..............................................................TCAGGTATTTAGTGACTCTCA................................................................................................. 21 1 1 8.00 8 7 0 1 0 0 0
..............................................................TCAGGTACTTAGTGACACTCAA................................................................................................ 22 1 1 8.00 8 6 0 1 1 0 0
..............................................................TCAGGTACATAGTGACTCTCAT................................................................................................ 22 2 1 8.00 8 8 0 0 0 0 0
..............................................................TCAGGTACTTAGTGACTCTAAA................................................................................................ 22 1 1 8.00 8 7 0 0 0 1 0
..............................................................TCAGGTACTTAATGACTCTCA................................................................................................. 21 1 1 8.00 8 6 0 1 0 1 0
...............................................................CAGGTACTTAGTGACTCTCAAC............................................................................................... 22 1 1 8.00 8 8 0 0 0 0 0
..............................................................TCAGGTACTCAGTGACTCTCA................................................................................................. 21 1 1 8.00 8 5 0 0 1 1 1
...............................................................TCAGTACTTAGTGACTCTCA................................................................................................. 20 3 3 7.33 22 22 0 0 0 0 0
..............................................................TCAGGTACTTAGTAACTCTCA................................................................................................. 21 1 1 7.00 7 5 0 2 0 0 0
..............................................................TCAGGTTCTTAGTGACTCTCA................................................................................................. 21 1 1 7.00 7 3 0 4 0 0 0
...............................................................CAGGTACTAAGTGACTCTCAAA............................................................................................... 22 2 1 7.00 7 7 0 0 0 0 0
..............................................................TCAGGTACTTAGTGCCTCTCA................................................................................................. 21 1 1 7.00 7 0 0 5 1 1 0
..............................................................TCAGGTACTTGGTGACTCTCAA................................................................................................ 22 1 1 7.00 7 4 0 3 0 0 0
..............................................................TCAGGTACTTAGTGACTCTTAA................................................................................................ 22 1 1 7.00 7 6 1 0 0 0 0
..............................................................TCAGGTACTTAGTGACTCTCACTT.............................................................................................. 24 2 1 7.00 7 2 5 0 0 0 0
...............................................................CATGTACTTAGTGACTCTCAA................................................................................................ 21 1 1 6.00 6 6 0 0 0 0 0
..............................................................TCAGGTACTTACTGACTCTC.................................................................................................. 20 1 1 6.00 6 2 3 0 0 1 0
..............................................................TCAGGTACTTAGTGACTCTCAATGCT............................................................................................ 26 0 1 6.00 6 1 5 0 0 0 0
..............................................................TCAGGTATTTAGTGACTCTCAA................................................................................................ 22 1 1 6.00 6 4 0 0 1 1 0
..............................................................TCAGGGACTTAGTGACTCT................................................................................................... 19 1 1 6.00 6 0 3 0 0 3 0
..............................................................TAAGGTACTTAGTGACTCTCAA................................................................................................ 22 1 1 6.00 6 4 0 1 0 1 0
...............................................................CAGGAACTTAGTGACTCTCA................................................................................................. 20 1 1 6.00 6 5 0 0 0 1 0
..............................................................TCAGGTACTTAGTGACTCTCATA............................................................................................... 23 2 1 6.00 6 5 0 1 0 0 0
..............................................................TCAGGTACTTATTGACTCTC.................................................................................................. 20 1 1 6.00 6 0 5 1 0 0 0
..............................................................TCAGTTACTTAGTGACTCTC.................................................................................................. 20 1 1 6.00 6 2 4 0 0 0 0
..............................................................TCAGGTACTTAGTGACTCTT.................................................................................................. 20 1 1 6.00 6 4 0 0 1 1 0
..............................................................TGAGGTACTTAGTGACTCTCAA................................................................................................ 22 1 1 6.00 6 6 0 0 0 0 0
..............................................................TCAGGTACTTAGTGAATCTCA................................................................................................. 21 1 1 6.00 6 4 0 2 0 0 0
..............................................................TCAGGTACTTAGTGATTCTCA................................................................................................. 21 1 1 6.00 6 2 3 0 0 0 1
..............................................................TCAGGGACTTAGTGACTCTCAAA............................................................................................... 23 2 1 6.00 6 1 2 0 2 1 0
....................................................................................................AGAGTCTCTCTGTGCCTGC............................................................. 19 0 1 6.00 6 6 0 0 0 0 0
..............................................................TCAGGTACTTAGTGACTCTCCAA............................................................................................... 23 2 1 6.00 6 0 0 6 0 0 0
..............................................................TCAGGTACTTAGTGACTCTCAAAG.............................................................................................. 24 1 1 6.00 6 6 0 0 0 0 0
..............................................................TCAGGTACTTAGTCACTCTC.................................................................................................. 20 1 1 6.00 6 2 2 0 2 0 0
...............................................................CAGGTACTTAGTGACTCTCAAG............................................................................................... 22 1 1 6.00 6 6 0 0 0 0 0
...............................................................CAGGGACTTAGTGACTCTCA................................................................................................. 20 1 1 6.00 6 6 0 0 0 0 0
..............................................................TCAGGTACTTAGTGACTTTCAA................................................................................................ 22 1 1 6.00 6 4 2 0 0 0 0
..............................................................TCAGGTACTTAGTGTCTCTCA................................................................................................. 21 1 1 6.00 6 5 0 0 1 0 0
..............................................................TCAGGTACTTGGTGACTCTCA................................................................................................. 21 1 1 6.00 6 4 0 1 1 0 0
..............................................................TCAGGTACTTAGTGACTCTGA................................................................................................. 21 1 1 5.00 5 5 0 0 0 0 0
..............................................................TCAGGTACCTAGTGACTCTCAAAA.............................................................................................. 24 3 1 5.00 5 5 0 0 0 0 0
..............................................................TCAGGTACTTCGTGACTCTCAA................................................................................................ 22 1 1 5.00 5 0 0 4 0 1 0
..............................................................CCAGGTACTTAGTGACTCTCAAA............................................................................................... 23 2 1 5.00 5 5 0 0 0 0 0
..............................................................TCAGGTACTTAGTGACTCTCATTT.............................................................................................. 24 2 1 5.00 5 5 0 0 0 0 0
...............................................................TAGGTACTTAGTGACTCTCA................................................................................................. 20 1 1 5.00 5 5 0 0 0 0 0
...................................................................................................GAGAGTCTCTCTGTGCCTG.............................................................. 19 0 1 5.00 5 3 0 0 0 0 2
..............................................................TCAGGCACTTAGTGACTCTC.................................................................................................. 20 1 1 5.00 5 0 0 0 2 3 0
..............................................................GCAGGTACTTAGTGACTCTC.................................................................................................. 20 1 1 5.00 5 4 0 0 1 0 0
.................................................................GGTACTTAGTGACTCTCAAA............................................................................................... 20 1 1 5.00 5 5 0 0 0 0 0
..............................................................TCAGGTACTTAGTGACTCG................................................................................................... 19 1 1 5.00 5 0 5 0 0 0 0
..............................................................TCAGGTAGTTAGTGACTCTCAA................................................................................................ 22 1 1 5.00 5 3 0 1 0 1 0
...............................................................CAGGTACTTAGTGACTCTCATT............................................................................................... 22 1 1 5.00 5 5 0 0 0 0 0
..............................................................TCAGGTACCTAGTGACTCTCAAT............................................................................................... 23 1 1 5.00 5 5 0 0 0 0 0
..............................................................TCAGGTACTTAGTTACTCTCAAA............................................................................................... 23 2 1 5.00 5 4 1 0 0 0 0
..............................................................TCACGTACTTAGTGACTCTCA................................................................................................. 21 1 1 5.00 5 5 0 0 0 0 0
..............................................................TCAGGTACTTAGTGACTCA................................................................................................... 19 1 1 4.00 4 4 0 0 0 0 0
...............................................................CAGGTACTGAGTGACTCTCAC................................................................................................ 21 2 1 4.00 4 4 0 0 0 0 0
..............................................................TCAGGTACTTAGAGACTCTC.................................................................................................. 20 1 1 4.00 4 1 3 0 0 0 0
..............................................................TCATGTACTTAGTGACTCTC.................................................................................................. 20 1 1 4.00 4 2 2 0 0 0 0
..............................................................TCAGGTACTTAGTTACTCT................................................................................................... 19 1 1 4.00 4 0 4 0 0 0 0
..............................................................TCAGGTACTTAGTAACTCTCAAA............................................................................................... 23 2 1 4.00 4 1 3 0 0 0 0
..............................................................TCAGGTACGTAGTGACTCTCAAC............................................................................................... 23 2 1 4.00 4 4 0 0 0 0 0
..............................................................TCAGGGACTTAGTGACTCTCTA................................................................................................ 22 2 1 4.00 4 0 0 0 2 2 0
..............................................................TCAGGTACTTAGTGACTCTCAAGA.............................................................................................. 24 2 1 4.00 4 4 0 0 0 0 0
..............................................................TCAGGTACCTAGTGACTCTCAC................................................................................................ 22 2 1 4.00 4 4 0 0 0 0 0
.............................................................CTCAGGTACTTAGTGACTCTC.................................................................................................. 21 0 1 4.00 4 2 0 1 0 1 0
...................................................................................................GAGAGTCTCTCTGTGCCTGCAAA.......................................................... 23 2 1 4.00 4 4 0 0 0 0 0
..............................................................GCAGGTACTTAGTGACTCTCAAAA.............................................................................................. 24 3 1 4.00 4 4 0 0 0 0 0
..............................................................TCAGGTACCTAGTGACTCTCAG................................................................................................ 22 2 1 4.00 4 4 0 0 0 0 0
...............................................................AAGGTACTTAGTGACTCTCA................................................................................................. 20 1 1 4.00 4 4 0 0 0 0 0
..............................................................TCAGGTACTTAGTGACCCTCAAA............................................................................................... 23 2 1 4.00 4 3 0 1 0 0 0
..............................................................TCAGGTACATAGGGACTCTCAA................................................................................................ 22 2 2 4.00 8 8 0 0 0 0 0
..............................................................TCAGGTACTTAGTCACTCT................................................................................................... 19 1 1 4.00 4 0 4 0 0 0 0
..............................................................TCAAGTACTTAGTGACTCTCAA................................................................................................ 22 1 1 4.00 4 2 1 1 0 0 0
..............................................................TCAGGTACGTAGTGACCCTCAA................................................................................................ 22 2 1 4.00 4 4 0 0 0 0 0
..............................................................TCAGGCACTTAGTGACTCT................................................................................................... 19 1 1 4.00 4 0 2 0 1 1 0
...................................................................................................GAGAGTCTGTCTGTGCCTGCAC........................................................... 22 1 1 4.00 4 4 0 0 0 0 0
..............................................................TCAGGTACTTAGTGATTCTCAA................................................................................................ 22 1 1 4.00 4 3 0 1 0 0 0
..............................................................TCAGGTACTTAGCGACTCTCAAA............................................................................................... 23 2 1 4.00 4 4 0 0 0 0 0
..............................................................TCAGGTACATAGTGACTCTCAG................................................................................................ 22 2 1 4.00 4 4 0 0 0 0 0
..............................................................TCAGGTACTTAGTGACTCTCAATGC............................................................................................. 25 0 1 4.00 4 3 1 0 0 0 0
...............................................................CAGGGACTTAGTGACTCTCAA................................................................................................ 21 1 1 4.00 4 4 0 0 0 0 0
..............................................................TCAGGTACTTAGTGACTCTCAAAC.............................................................................................. 24 2 1 4.00 4 2 2 0 0 0 0
..............................................................TCAGATACTTAGTGACTCTCAA................................................................................................ 22 1 1 4.00 4 2 0 1 0 1 0
...............................................................CAGGTACTCAGTGACTCTCAAA............................................................................................... 22 2 1 3.00 3 3 0 0 0 0 0
...................................................................................................GAGAGTCTGTCTGTGCCTGC............................................................. 20 1 1 3.00 3 3 0 0 0 0 0
..............................................................TCAGGCACTTAGTGCCTCTCA................................................................................................. 21 2 1 3.00 3 0 0 2 0 1 0
..............................................................TCAGGTACTTAGTGACTCTCTA................................................................................................ 22 1 1 3.00 3 0 0 3 0 0 0
..............................................................TCAGGTACCTAGTGACTCTCACA............................................................................................... 23 3 1 3.00 3 3 0 0 0 0 0
.............................................................TTCAGGTACTTAGTGACTCTCAAA............................................................................................... 24 2 1 3.00 3 3 0 0 0 0 0
..............................................................TCAGGTAATTAGTGACTCTCAA................................................................................................ 22 1 1 3.00 3 0 0 1 1 1 0
..............................................................TCAGTTACTTAGTGACTCTCAAA............................................................................................... 23 2 1 3.00 3 3 0 0 0 0 0
..............................................................ACAGGTACTTAGTGACTCTCAC................................................................................................ 22 2 1 3.00 3 1 0 1 0 1 0
..............................................................TCAGGTACTTAGTGACTCTCAATTA............................................................................................. 25 2 1 3.00 3 3 0 0 0 0 0
..............................................................TCAGGTACTTAGTGACTCTCAATG.............................................................................................. 24 0 1 3.00 3 3 0 0 0 0 0
..............................................................TCAGGTACATAGGGACTCTCA................................................................................................. 21 2 2 3.00 6 6 0 0 0 0 0
..............................................................TCAGGTACGTAGAGACTCTCAA................................................................................................ 22 2 1 3.00 3 3 0 0 0 0 0
...............................................................AAGGTACTTAGTGACTCTCAA................................................................................................ 21 1 1 3.00 3 3 0 0 0 0 0
..............................................................TCAGGTACTTAGTGACTCTA.................................................................................................. 20 1 1 3.00 3 2 0 1 0 0 0
..............................................................TCAGGTACTTTGTGACTCTCA................................................................................................. 21 1 1 3.00 3 3 0 0 0 0 0
...............................................................CAGGAACTTAGTGACTCTCAA................................................................................................ 21 1 1 3.00 3 3 0 0 0 0 0
..............................................................TCAGGTACTTAGTGACTCTTA................................................................................................. 21 1 1 3.00 3 2 0 1 0 0 0
..............................................................TCAGGTTCTTAGTGACTCTCAA................................................................................................ 22 1 1 3.00 3 3 0 0 0 0 0
....................................................................................................AGAGTCTCTCTGTGCCTGCAA........................................................... 21 1 1 3.00 3 3 0 0 0 0 0
...............................................................CAGGTACTTAGTGACTCTCGA................................................................................................ 21 1 1 3.00 3 3 0 0 0 0 0
..............................................................TCAGGTACTTAGTGCCTCTCAA................................................................................................ 22 1 1 3.00 3 0 0 3 0 0 0
...............................................................CAGGTACTTAGCGACTCTCAA................................................................................................ 21 1 1 3.00 3 3 0 0 0 0 0
..............................................................TCAGGTACTTAGCGACTCTC.................................................................................................. 20 1 1 3.00 3 1 1 0 0 1 0
..............................................................TCACGTACTTAGTGACTCTC.................................................................................................. 20 1 1 3.00 3 0 2 0 1 0 0
...............................................................CAGGTACTTAGGGACTCTCA................................................................................................. 20 1 1 3.00 3 3 0 0 0 0 0
..............................................................ACAGGTACTTAGTGACTCTCAAA............................................................................................... 23 2 1 3.00 3 3 0 0 0 0 0
..............................................................TCAGGTACTTAGTGACTCTCAAAAT............................................................................................. 25 3 1 3.00 3 3 0 0 0 0 0
...............................................................TAGGTACTTAGTGACTCTCAA................................................................................................ 21 1 1 3.00 3 3 0 0 0 0 0
..............................................................TCAGGGACTTAGTGACTCTCGA................................................................................................ 22 2 1 3.00 3 0 0 2 0 1 0
..............................................................TCAGGTAGTTAGTGACTCTCA................................................................................................. 21 1 1 3.00 3 1 0 1 1 0 0
.........................................CTACAAGCACACTTTGCCGGC...................................................................................................................... 21 0 1 3.00 3 1 1 0 1 0 0
.............................................................ATCAGGTAGTTAGTGACTCTCAA................................................................................................ 23 2 1 3.00 3 3 0 0 0 0 0
.............................................................CTCAGGTAGTTAGTGACTCTCAA................................................................................................ 23 1 1 3.00 3 3 0 0 0 0 0
...............................................................CGGGTACTTAGTGACTCTCA................................................................................................. 20 1 1 3.00 3 2 0 1 0 0 0
................................................................CAGTACTTAGTGACTCTCAA................................................................................................ 20 2 1 3.00 3 3 0 0 0 0 0
..............................................................TCAGGTACCTAGGGACTCTCAA................................................................................................ 22 2 1 3.00 3 3 0 0 0 0 0
...................................................................................................GAGAGTCTCTCTGTGCCTGCAAAA......................................................... 24 3 1 3.00 3 3 0 0 0 0 0
...............................................................CAGGTACTTAGTGGCTCTCA................................................................................................. 20 1 1 3.00 3 3 0 0 0 0 0
...............................................................CAGGTACTTAGTTACTCTCA................................................................................................. 20 1 1 3.00 3 3 0 0 0 0 0
..............................................................TCAGGTACTTAGTGTCTCTCAA................................................................................................ 22 1 1 3.00 3 2 0 0 1 0 0
..............................................................TCAGGTACTTAGTGACTCACA................................................................................................. 21 1 1 3.00 3 3 0 0 0 0 0
................................................................AGGTACTTAGTGACTCTCAAAA.............................................................................................. 22 2 1 3.00 3 3 0 0 0 0 0
................................................................AGGTACTTCGTGACTCTCAA................................................................................................ 20 1 1 2.00 2 2 0 0 0 0 0
..............................................................TCAGGTACTTAGTGACTTTCA................................................................................................. 21 1 1 2.00 2 1 0 0 0 0 1
..............................................................TCAGGTACATAGTGACTCTCAAT............................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0
...............................................................CAGGTACTTAGTTACTCTCAA................................................................................................ 21 1 1 2.00 2 2 0 0 0 0 0
..............................................................TCAGGTACTTAGTGCCTCTCCA................................................................................................ 22 2 1 2.00 2 0 0 2 0 0 0
...............................................................CAGGTACTTAGGGACTCTCAA................................................................................................ 21 1 1 2.00 2 2 0 0 0 0 0
................................................................AGGTACTTAGTGACTCTCAAAAA............................................................................................. 23 3 1 2.00 2 2 0 0 0 0 0
..............................................................TCAGGTACGTAGTGACTCTCT................................................................................................. 21 2 1 2.00 2 2 0 0 0 0 0
..............................................................TCAGGTACTTAGTGACTCTCAAGC.............................................................................................. 24 2 1 2.00 2 2 0 0 0 0 0
...............................................................CAGGTACTTAGTGACTCTCACT............................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..............................................................TCAGGTACGTAGCGACTCTCA................................................................................................. 21 2 1 2.00 2 2 0 0 0 0 0
................................................................TCGTACTTAGTGACTCTCAA................................................................................................ 20 2 1 2.00 2 2 0 0 0 0 0
..............................................................TCAGGTACTTACTGACTCTCAAA............................................................................................... 23 2 1 2.00 2 1 1 0 0 0 0
...................................................................................................TAGAGTCTCTCTGTGCCTGCAC........................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..............................................................TCAGGGACTTAGTGACTCTCG................................................................................................. 21 2 1 2.00 2 0 0 1 0 1 0
..............................................................TCAGGTACTTAGTGACTCTCAAGT.............................................................................................. 24 2 1 2.00 2 2 0 0 0 0 0
..............................................................TCAGGTACGTAGTGACTCTCAAG............................................................................................... 23 2 1 2.00 2 2 0 0 0 0 0

Anti-sense strand reads

TAAACTACGCCCGCGGAAGCTCACAAATAGCTCACTAAATAGATGTTCGTGTGAAACGGCCGAGTCCATGAATCACTGAGAGTTACGAAAGCTGTAGAACTCTCAGAGAGACACGGACGTGACCGCCACCACGTTGACGTTGCTAATTCCCACAAGGATTATTCACAATATAAATCTCAC

********************************************((((...(((((((..(((((((..((.(((((((((((.......)))..)))))))).))..)))))))..)))))))..))))...*********************************************** 		Read size # Mismatch Hit Count Total Norm Total V050

head

 V111

male body
..................................................................................................ACTCTCAGTGAGTCACGGACG............................................................. 21 2 1 1.00 1 1 0
............................................................................TGAGAGTTACAAAAGCCGAAG................................................................................... 21 3 3 0.67 2 0 2

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droPer2 scaffold_1:9894889-9895068 + dpe-mir-306 Known_mirbase ATT-T---------GATGCGGGCGC---------C-T-------------TCGA------GTGTTTAT-CGAG------------TG-ATTTATC---TA---------CAAGCA-------------------CACTTTG--CCGGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TCGAC-ATCTTGAGAGTCTCTCTGTGCCTGCACTGG-----CGGTGGTGCAACTGCA-ACGAT------TAAGGGTG-----TTCCTAATAAGTGTTATATT-T-----AGAGTG
dp5 4_group3:8443770-8443949 + dps-mir-306 Known_mirbase ATT-T---------GATGTGGGCGC---------C-T-------------TCGA------GTGTTTAT-CGAG------------TG-ATTTATC---TA---------CAAGCA-------------------CACTTTG--CCGGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TCGAC-ATCTTGAGAGTCTCTCTGTGCCTGCACTGG-----CGGTGGTGCAACTGCA-ACGAT------TAAGGGTG-----TTCCTAATAAGTGTTATAAT-A-----AAAGTG
droWil2 scf2_1100000004945:873682-873870 - dwi-mir-306-2 Known_mirbase ATT-A---------AATACTTA-TC---------C-ATAAGGTG--ACAAAAAA------GTGACTATA-CAAAG----------TG-ATACGAGTTATC---------TCTGC----------------------CTAAA---CAGCTCAGGTACTTAGTGACTCTCAAA--------GAATATATATAGACTTGAGAGACGCTCTGTACCTAGACTGTTGTGTCTGCGGAATGTCAACA-TCATG------T----GTG-----T-GTGTGTGTGTGATA-----T-----ATAGTG
droVir3 scaffold_12963:12863169-12863333 - dvi-mir-306 Known_mirbase GTT-G---------TGC-----------------T-T-------------TTCC------GTGCTGAACTCCT------------C-------CC---GC---------CCTGCA-------------------CACCCCG---CTGCTCAGGTACTTAGTGACTCTCAATCATCTATTGCTT-TGCAT-ACCTTGAGGGTCGCTCTGTGCCTGTGCCGC-----CTGTGCTGCACAACCA-ACGAC------G-AGATGC-----ATACGTG--------ACCCT-G-----ACCGTG
droMoj3 scaffold_6500:7201896-7202065 + dmo-mir-306 Known_mirbase ACT-C---------AGGCTCC---------------A-------------TC-A------ATATA--G-----------CTAG-----AGAG-------------------TGCCCGATTCATGATGTCCAGCACACGCTG---CAGCTCAGGTACTTAGTGACTCTCAATCACATATTGCTT-TGCAT-ACTTTGAGGGTCGCTCTGTGCCTGTGCCGC-----CCGTGTTGCACACAGCCACACA--------ATTGT--------GAATT------------------CGAGT---
droGri2 scaffold_14978:830827-831055 + dgr-mir-306 Known_mirbase AAA-A---------AG--CGAAAGATTCGTTCGTCGATTGGTTCTTATTCTTGT--GT--TAATCATTATCAGTGTTAAAT---GTG-GAAAAAC---CAATCCAATCCGCTGCA-------------------CACGTTG---CTGCTCAGGTACTTAGTGACTCTCAATTCAACATTGTAT-TGCACGCCTTTGAGGGTCGCTCTGTGCCTGTGTTGC-----ACGTGTTGCATTCACA-CCATC--------CGAGTGATTTGTGTCCTTTGAGTGTCG-----A-----TTTGTG
droAna3 scaffold_12916:15864817-15864986 - dan-mir-306 Known_mirbase AAT-G---------GAAATCTATTC--CG-------ATTGG---------A--------------------TG------------TG-AAAGTGC---CA---------GAAGTC-------------------CACTTGG---TAGCTCAGGTACTTAGTGACTCTCAAT--------GCAT-TTGAC-ATTTTGGGAGCCACTTTGTGCCTGGGCCAT-----CAGTGCGACTATATCT-TCTAT------T-AAAAAA-ATTGTTTAAAATATATGGTA-----T-----ATAGTG
droBip1 scf7180000396717:103566-103711 - ATT-A---------AATGG-------------------------------AAAA------ATATT-------G------TGAAAGTTGAC---CC---GA---------AAAGTC-------------------CACTTAA---TGGCTCAGGTACTTAGTGACTCTCAAT--------GTAT-TTGAC-ATTTTGAGAGCCACTTTGTGCCTGGGCCAT-----CAGTGTGGCTATATCT-TCTAT----------------------------------ATAAT-C-----ATGGTA
droKik1 scf7180000302382:529328-529472 + TGT----------------G--------------------------TTT--------------------CAAG------------TG-CTGTA-A-TACC---------AGTGCC-------------------CACTTGATGATGGCTCAGGTACTTAGTGACTCTCAAA--------TGCCTTGAAAAGTTTTGAGAGTCTCTCTGTGCCTAGGCTGT-----AGGTGAGGCAAACTCA-ACTAC-----AT-AC-------------------AT----CAAT-T-----AAATTA
droFic1 scf7180000454078:624015-624190 + TTT-A----------AAGTGA-------A-------TATGG---------ATCA------GTGGCTATAGCAG------------TG-CATATTT---TC---------TGTGCT-------------------TGCTCGA---TGGCTCAGGTACTTAGTGACTCTCAAT--------GGAT-TTCAC-ATTTTGGGAGTCGCTCTGTGCCTGTGCTGC-----AAGTAAGACATTCTCCTACAAA------AAAAAGTG-----TTAAAAATAAGT----TGAT-T-----ACAACA
droEle1 scf7180000490579:645520-645708 - ACAAA-------AAGAAGTGC-------A-------CTTGG---------ATA----TCAGTATATTTATAAGCG----------TGCATTTGAT---TT---------TAAGCC-------------------CACTTGA---TTGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TTGAC-ATTTTGGGAGTCGCTCTGTGCCTGTGCTGC-----CAGTGAAGCAATGTCT-ACAGG------T-AAAGTG-----ATAAATATAGTT----TCATCACAACCAACATG
droRho1 scf7180000768553:9339-9524 + ATA-C---------AAAGTGC-------A-------TATGG---------AACAGTGTCAGTGTATATCTCAGTA---------GTGCATATATT---TT---------TGAGCC-------------------CACTCGA---TGGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TCGAC-ATTTTGGGAGTCGCTCTGTGCCTGTGCTGC-----CAGTGAAGCATTCTCC-CCATT------A-AAAGTG-----TTAACTATAATTG---CAAT-A-----AAAGCA
droBia1 scf7180000301468:857957-858133 + TCC-TTATACATGCAAAGTGC-------T-------TGTGG---------ATAA------GTGTT-TTATCAGTG----------GA-AAATGAA---TT---------CAAGCT-------------------TACTAGG---TGGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TCGAC-ACTTTGGGACTCGCTCTGTACCTGCGCTGC-----CGGTGAGGCCCTCTCT-ACAAAGAAATAC-AAAA------------------TAGT------A-----TATATA
droTak1 scf7180000415914:422619-422766 + TTA-T-----A---TGAGTGT-------A-------TAT------------------------TATATATCAG------------TG-CATATCT-CTTT---------TAAGCC-------------------CACTCGA---TGGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TCGAC-ATTTTGGGAGTCGCTCTGTGCCTGCGCCGC-----CAGTAAGGCATTCTCC-ACAGA--A--AT-AAAGT--------------------------------------G
droEug1 scf7180000408961:272315-272467 + ATA-A---------AG--TAC-------A-------AATGG---------ATCA------ATGTG----CAAG------------TG-ACTATTT---TT---------CAAGTC-------------------CACTTAA---TGGCTCAGGTACTTAGTGACTCTCAAT--------GATT-TTGAC-AATTTGGGAGTCGCTCTGTGCCTGTGCTGC-----TAGTGAGGCAATCTTCTACAAA------T-AAAGTG-----A---------------------------ATTTA
dm3 chr2L:16698359-16698528 + dme-mir-306 Known_mirbase TTT-A---------GTGGTG--------------------------TTTCTTGT------GTGTTTAAATCAG------------TG-AATAGTT---TA---------AAAGTC-------------------CACTCGA---TGGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TTGAC-ATTTTGGGGGTCACTCTGTGCCTGTGCTGC-----CAGTGGGACATAATCT-ACAAA------T-AAAGTG-----ATAA---TCAGTGATA---------TCAGTGAA
droSim2 2l:16265186-16265349 + dsi_274 confident TTT-A---------GTGGTG--------------------------ACTTTAGT------GTGTTTAAATCAG------------TG-AATAGTT---TA---------AAAGTC-------------------CACTCGA---TGGCTCAGGTACTTAGTGACTCTCAAT--------GCCT-TTGAC-ATTTTGGGGGTCACTCTGTGCCTGTGCTGC-----CAGTGGGACATAATCT-ACAAA------T-AAAGTG-----ATAAGTA------------------CCAGTGAA
droSec2 scaffold_7:345375-345539 + dse-mir-306 Known_mirbase ATTTA---------GTGGTG--------------------------ACTTTAGT------GTGTTTAAATCAG------------TG-AACAGTT---TA---------AAATTC-------------------CACTCGA---TGGCTCAGGTACTTAGTGACTCTCAAT--------GCCT-TTGAC-ATTTTGGGGGTCACTCTGTGCCTGTGCTGC-----CAGTGGGACATAATCT-ACAAA------T-AAAGGG-----ATAAGTA------------------CCAGTGAA
droYak3 2R:4404528-4404702 - dya-mir-306 Known_mirbase CTT-T---------GTAGTGCACGATTCG-------ATTAA---------ATCT------GTGTATAAATCAG------------TG-AAAAGTT---TT---------AAAGTC-------------------CACTCGG---TGGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TTGAC-ATTTTGGGGGTCACTCTGTGCCTGTGCTGC-----CAGTAGGACATAATCC-ACAAA------T-AAAGTG-----ATTTACATTGG-----------------AATAA
droEre2 scaffold_4845:19768005-19768174 + der-mir-306 Known_mirbase TAC-T---------GCACGGTTC-----G-------CTTAA---------ATCT------GTGTACAAGTCAG------------TG-AATAGTT---TA---------AGTGTC-------------------CACTCGG---TGGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TTGAC-ATTTTGGGGGTCACTCTGTGCCTGTGCTGC-----CAGTGGGACGCAATCA-ACAAA-----AT-AAAGTG-----ATAAGTACA------------------AGTGAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
ATT-T---------GATGCGGGCGC---------C-T-------------TCGA------GTGTTTAT-CGAG------------TG-ATTTATC---TA---------CAAGCA-------------------CACTTTG--CCGGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TCGAC-ATCTTGAGAGTCTCTCTGTGCCTGCACTGG-----CGGTGGTGCAACTGCA-ACGAT------TAAGGGTG-----TTCCTAATAAGTGTTATATT-T-----AGAGTGSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAA.................................................................................................................................22149916.00499167364742991342834466
....................................................................................................................................................TCAGGTACTTAGTGACTCTCA..................................................................................................................................21145389.00453891114418841607389284111
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAA.................................................................................................................................2114627.004627046270000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCA..................................................................................................................................2014043.004043040374110
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------........................................................................................................................2313874.0038741203655811170
....................................................................................................................................................TCAGGTACTTAGTGACTCTC...................................................................................................................................2013161.00316189017927920613856
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------A.......................................................................................................................241764.007646567821000
....................................................................................................................................................TCAGGTACTTAGTGACTCT....................................................................................................................................191759.00759502201926183
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAC.................................................................................................................................221610.0061042537101551
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------........................................................................................................................221348.0034803480000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------AA......................................................................................................................251259.00259262285000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAT.................................................................................................................................221245.0024562344010
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------........................................................................................................................231232.0023262187100
......................................................................................................................................................AGGTACTTAGTGACTCTCAA.................................................................................................................................201226.0022602171530
......................................................................................................................................................AGGTACTTAGTGACTCTCA..................................................................................................................................191205.002050176171020
.....................................................................................................................................................CAGGTACTTAGTGACTCTC...................................................................................................................................191166.0016611650000
...................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCAC..................................................................................221161.0016181389060
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAG.................................................................................................................................221152.0015211501000
...................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCA...................................................................................211111.0011101071210
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------........................................................................................................................23185.008532476000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------A.......................................................................................................................23176.00760760000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------........................................................................................................................23170.007015514000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAC.................................................................................................................................21168.00680680000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------........................................................................................................................23166.00665582100
....................................................................................................................................................TCAGGTACTTAGTGACTCTCT..................................................................................................................................21144.00441985525
...................................................................................................................................................CTCAGGTACTTAGTGACTCTCAA.................................................................................................................................23140.00400400000
...................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGC....................................................................................20133.00330320001
....................................................................................................................................................TCAGGTACTTAGTGACTCTCG..................................................................................................................................21131.003117122000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------........................................................................................................................23130.00301290000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCC..................................................................................................................................21127.00277510311
....................................................................................................................................................TCAGGTACTTAGTGACTCC....................................................................................................................................19126.00262510000
...................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCAA..................................................................................22125.00250250000
.......................................................................................................................................................GGTACTTAGTGACTCTCA..................................................................................................................................18123.00230230000
.......................................................................................................................................................GGTACTTAGTGACTCTCAA.................................................................................................................................19123.00230230000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------AA......................................................................................................................24122.00220220000
....................................................................................................................................................................................................AGAGTCTCTCTGTGCCTGCAC..................................................................................21122.00220220000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAT--------........................................................................................................................22121.00210210000
...................................................................................................................................................CTCAGGTACTTAGTGACTCTCA..................................................................................................................................22121.00210192000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------T.......................................................................................................................24121.00210201000
....................................................................................................................................................TCAGGTACTTAGTGACTC.....................................................................................................................................18120.00201450100
.....................................................................................................................................................CAGGTACTTAGTGACTCT....................................................................................................................................18119.00191180000
......................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------........................................................................................................................21119.00190190000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAT.................................................................................................................................21117.00170170000
......................................................................................................................................................AGGTACTTAGTGACTCTC...................................................................................................................................18115.00150100320
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------T.......................................................................................................................24113.00133100000
........................................................................................................................................................GTACTTAGTGACTCTCAA.................................................................................................................................18112.00120120000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------A.......................................................................................................................24111.0011290000
....................................................................................................................................................................................................AGAGTCTCTCTGTGCCTGCA...................................................................................20110.00100100000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAG.................................................................................................................................21110.00100100000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------A.......................................................................................................................24110.00100100000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------A.......................................................................................................................24110.0010280000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAGA--------........................................................................................................................2319.009090000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCACA--------........................................................................................................................2218.008080000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCACC--------........................................................................................................................2218.008710000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAC--------........................................................................................................................2218.008080000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------GCT.....................................................................................................................2616.006510000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCATA--------........................................................................................................................2316.006051000
....................................................................................................................................................TCAGGTACTTAGTGACTCTT...................................................................................................................................2016.006040110
....................................................................................................................................................................................................AGAGTCTCTCTGTGCCTGC....................................................................................1916.006060000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAG--------........................................................................................................................2216.006060000
...................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTG.....................................................................................1915.005030002
.......................................................................................................................................................GGTACTTAGTGACTCTCAAA--------........................................................................................................................2015.005050000
....................................................................................................................................................TCAGGTACTTAGTGACTCG....................................................................................................................................1915.005500000
....................................................................................................................................................TCAGGTACTTAGTGACTCA....................................................................................................................................1914.004040000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------A.......................................................................................................................2414.004040000
...................................................................................................................................................CTCAGGTACTTAGTGACTCTC...................................................................................................................................2114.004021010
...................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCAAA.................................................................................2314.004040000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------GC......................................................................................................................2514.004130000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------C.......................................................................................................................2414.004220000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------TA......................................................................................................................2513.003030000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------G.......................................................................................................................2413.003030000
....................................................................................................................................................TCAGGTACTTAGTGACTCTA...................................................................................................................................2013.003021000
....................................................................................................................................................................................................AGAGTCTCTCTGTGCCTGCAA..................................................................................2113.003030000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------AT......................................................................................................................2513.003030000
..............................................................................................C---TA---------CAAGCA-------------------CACTTTG--CCGGC.......................................................................................................................................................2113.003110100
...................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCAAAA................................................................................2413.003030000
......................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------A.......................................................................................................................2213.003030000
......................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------AA......................................................................................................................2312.002020000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------C.......................................................................................................................2412.002020000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------T.......................................................................................................................2412.002020000
dp5
ATT-T---------GATGTGGGCGC---------C-T-------------TCGA------GTGTTTAT-CGAG------------TG-ATTTATC---TA---------CAAGCA-------------------CACTTTG--CCGGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TCGAC-ATCTTGAGAGTCTCTCTGTGCCTGCACTGG-----CGGTGGTGCAACTGCA-ACGAT------TAAGGGTG-----TTCCTAATAAGTGTTATAAT-A-----AAAGTGSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
....................................................................................................................................................TCAGGTACTTAGTGACTCTCA..................................................................................................................................21194649.009464973713373228517315643184829740373489
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAA.................................................................................................................................22178816.0078816375451034487152140573621261515963120
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------........................................................................................................................2319293.009293164573711417616521137763
.....................................................................................................................................................CAGGTACTTAGTGACTCTCA..................................................................................................................................2016809.00680906764514002267
....................................................................................................................................................TCAGGTACTTAGTGACTCTC...................................................................................................................................2016035.00603534437741711015119619270329132
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAA.................................................................................................................................2115251.00525105192205004066
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------A.......................................................................................................................2412643.002643118748702500637181
...................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCAC..................................................................................2212583.0025830156084614012303415
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAC.................................................................................................................................2211582.00158241144104293163241137
....................................................................................................................................................TCAGGTACTTAGTGACTCT....................................................................................................................................1911381.00138135110418617420716919
...................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCA...................................................................................2111059.00105909973253001525
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------AA......................................................................................................................251908.009080672130300202171
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------........................................................................................................................231682.0068203583669422311620
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------........................................................................................................................221650.006500637100001020
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAT.................................................................................................................................221487.004871287825103105615
...................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGC....................................................................................201431.0043103742484001173
.....................................................................................................................................................CAGGTACTTAGTGACTCTC...................................................................................................................................191394.00394038920100200
......................................................................................................................................................AGGTACTTAGTGACTCTCA..................................................................................................................................191382.00382132620223010810
......................................................................................................................................................AGGTACTTAGTGACTCTCAA.................................................................................................................................201340.0034002730021413524
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------A.......................................................................................................................231202.00202019800000202
....................................................................................................................................................................................................AGAGTCTCTCTGTGCCTGCAC..................................................................................211187.001870173122000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------........................................................................................................................231185.0018501261816003310
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------........................................................................................................................231184.0018401034354102422
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------T.......................................................................................................................241171.001710791123106636
...................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCAA..................................................................................221157.0015701331220001000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAC.................................................................................................................................211127.00127012220100200
....................................................................................................................................................TCAGGTACTTAGTGACTCTCT..................................................................................................................................211127.001271065536522290
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------........................................................................................................................231121.00121584116400920
.....................................................................................................................................................CAGGTACTTAGTGACTCT....................................................................................................................................181104.00104010400000000
....................................................................................................................................................................................................AGAGTCTCTCTGTGCCTGCA...................................................................................201104.00104010220000000
...................................................................................................................................................CTCAGGTACTTAGTGACTCTCA..................................................................................................................................22184.008406821310351
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------T.......................................................................................................................24183.0083037700003441
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------AA......................................................................................................................24176.007607600000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAG.................................................................................................................................22167.006705410501600
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------........................................................................................................................23167.006705910100501
...................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTG.....................................................................................19165.006506210000110
...................................................................................................................................................CTCAGGTACTTAGTGACTCTCAA.................................................................................................................................23163.006305131020510
....................................................................................................................................................TCAGGTACTTAGTGACTCTCG..................................................................................................................................21159.005914021701250
.......................................................................................................................................................GGTACTTAGTGACTCTCA..................................................................................................................................18158.005805800000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------A.......................................................................................................................24153.0053010200004001
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------A.......................................................................................................................24153.005304500000800
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------A.......................................................................................................................24153.0053032600001500
......................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------........................................................................................................................21153.005304200000911
..............................................................................................C---TA---------CAAGCA-------------------CACTTTG--CCGGC.......................................................................................................................................................21150.0050032601000110
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAT--------........................................................................................................................22150.005004400000600
....................................................................................................................................................TCAGGTACTTAGTGACTC.....................................................................................................................................18143.0043112730001514
....................................................................................................................................................TCAGGTACTTAGTGACTCTCC..................................................................................................................................21142.0042012431620050
.......................................................................................................................................................GGTACTTAGTGACTCTCAA.................................................................................................................................19137.003703700000000
....................................................................................................................................................................................................AGAGTCTCTCTGTGCCTGC....................................................................................19134.003403310000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------CTC.....................................................................................................................26128.002800000002800
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------C.......................................................................................................................24127.0027011000001501
....................................................................................................................................................TCAGGTACTTAGTGACTCTA...................................................................................................................................20123.00230600010880
......................................................................................................................................................AGGTACTTAGTGACTCTC...................................................................................................................................18122.002201400230120
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------GC......................................................................................................................25121.002101001100540
.....................................................................................................................................................CAGGTACTTAGTGACTCTCACA--------........................................................................................................................22121.002101910000100
....................................................................................................................................................TCAGGTACTTAGTGACTCTT...................................................................................................................................20120.002001102000070
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------TT......................................................................................................................25120.00200720000911
....................................................................................................................................................TCAGGTACTTAGTGACTCTCATA--------........................................................................................................................23120.002009000001010
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAT.................................................................................................................................21120.002002000000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------A.......................................................................................................................24120.002001440000200
.....................................................................................................................................................CAGGTACTTAGTGACTCTCACC--------........................................................................................................................22119.001901800000100
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------G.......................................................................................................................24117.001705100001100
..................................................................................................................................................................................................TGAGAGTCTCTCTGTGCCTGCA...................................................................................22116.001601200000400
...................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCAAA.................................................................................23114.001401300000100
....................................................................................................................................................TCAGGTACTTAGTGACTCTCTT.................................................................................................................................22114.00140900000050
....................................................................................................................................................................................................AGAGTCTCTCTGTGCCTGCACA.................................................................................22114.001401300000001
..................................................................................................TA---------CAAGCA-------------------CACTTTG--CCGGC.......................................................................................................................................................20113.001311010000001
........................................................................................................................................................GTACTTAGTGACTCTCAA.................................................................................................................................18113.001301100100100
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------T.......................................................................................................................24113.001303000001000
....................................................................................................................................................TCAGGTACTTAGTGA........................................................................................................................................15112.00120000000624
...................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCACC.................................................................................23112.00120731100000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------AA......................................................................................................................25112.00120310000800
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------AAA.....................................................................................................................26112.001201000001100
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAC--------........................................................................................................................22112.001201110000000
..................................................................................................................................................................................................TGAGAGTCTCTCTGTGCCTGC....................................................................................21111.001101100000000
....................................................................................................................................................TCAGGTACTTAGTGACT......................................................................................................................................17111.00110000000641
....................................................................................................................................................................................................AGAGTCTCTCTGTGCCTGCAA..................................................................................21111.001101100000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCATG--------........................................................................................................................23110.00100000000820
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------T.......................................................................................................................24110.00100230000131
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------GCT.....................................................................................................................26110.00100510000310
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------TAC.....................................................................................................................26110.00100000000640
....................................................................................................................................................TCAGGTACTTAGTGACTCC....................................................................................................................................1919.0092250000000
.............................................................................................TC---TA---------CAAGCA-------------------CACTTTG--CCGGC.......................................................................................................................................................2219.0090620100000
...................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCAAAA................................................................................2419.0090900000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCCT.................................................................................................................................2219.0095100100020
.....................................................................................................................................................CAGGTACTTAGTGACTCTCACC--------A.......................................................................................................................2319.0090900000000
.......................................................................................................................................................GGTACTTAGTGACTCTCAAA--------........................................................................................................................2019.0090810000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------TT......................................................................................................................2518.0080200000600
.........................................................................................................................................................TACTTAGTGACTCTCAA.................................................................................................................................1718.0080000000503
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------AT......................................................................................................................2518.0080600000200
....................................................................................................................................................TCAGGTACTTAGTGACTCTCCC.................................................................................................................................2218.0080104000210
....................................................................................................................................................TCAGGTACTTAGTGACTCA....................................................................................................................................1918.0080000100403
...................................................................................................................................................CTCAGGTACTTAGTGACTCTC...................................................................................................................................2117.0070501000010
...................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCT...................................................................................2117.0070601000000
...................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGT....................................................................................2017.0070700000000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAG--------........................................................................................................................2217.0070700000000
....................................................................................................................................................TCAGGTACTTAGTGACTCAA...................................................................................................................................2017.0070000000511
..........................................................................................................................................................ACTTAGTGACTCTCAA.................................................................................................................................1617.0070000000304
.....................................................................................................................................................CAGGTACTTAGTGACTCTCT..................................................................................................................................2017.0070700000000
......................................................................................................................................................AGGTACTTAGTGACTCTCAC.................................................................................................................................2017.0070600000100
...................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCAT..................................................................................2217.0070510000010
...................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCC...................................................................................2117.0070610000000
....................................................................................................................................................................................................AGAGTCTCTCTGTGCCTGCACC.................................................................................2216.0060501000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------TA......................................................................................................................2516.0060000000204
...................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCACA.................................................................................2316.0060510000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------A.......................................................................................................................2416.0060500000100
......................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------A.......................................................................................................................2216.0060600000000
...................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTT.....................................................................................1916.0060600000000
..........................................................................................................................................................ACTTAGTGACTCTCA..................................................................................................................................1516.0060000000303
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAGA--------A.......................................................................................................................2416.0060200000400
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------CA......................................................................................................................2516.0060000000501
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------GA......................................................................................................................2515.0050000000500
...................................................................................................A---------CAAGCA-------------------CACTTTG--CCGGC.......................................................................................................................................................1915.0050500000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCATA--------A.......................................................................................................................2415.0050400100000
...................................................................................................................................................CTCAGGTACTTAGTGACTCTCAAA--------........................................................................................................................2415.0050500000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------C.......................................................................................................................2415.0050001000400
..................................................................................................................................................................................................TGAGAGTCTCTCTGTGCCT......................................................................................1915.0050500000000
......................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------AA......................................................................................................................2315.0050400000100
droWil2
ATT-A---------AATACTTA-TC---------C-ATAAGGTG--ACAAAAAA------GTGACTATA-CAAAG----------TG-ATACGAGTTATC---------TCTGC----------------------CTAAA---CAGCTCAGGTACTTAGTGACTCTCAAA--------GAATATATATAGACTTGAGAGACGCTCTGTACCTAGACTGTTGTGTCTGCGGAATGTCAACA-TCATG------T----GTG-----T-GTGTGTGTGTGATA-----T-----ATAGTGSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
....................................................................................................................................................TCAGGTACTTAGTGACTCTCA..................................................................................................................................2128714.5017429239575571662171244
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAA.................................................................................................................................2228614.0017228244056741473491751
...................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGAC..................................................................................2222118.504237353511252358180
....................................................................................................................................................TCAGGTACTTAGTGACTCTC...................................................................................................................................2021732.00346419085414825186
....................................................................................................................................................TCAGGTACTTAGTGACTCT....................................................................................................................................1921032.502065177317217643
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------........................................................................................................................232864.00172891737086535
...................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGACT.................................................................................232850.0017001364345475173
...................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGA...................................................................................212554.50110999726184325
.....................................................................................................................................................CAGGTACTTAGTGACTCTCA..................................................................................................................................202384.507692760070
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAA.................................................................................................................................212259.505191515021
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------........................................................................................................................232242.004841426322032
...................................................................................................................................................................................................GAGAGACGCTCTGTACCTAG....................................................................................202234.00468430141248
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------A.......................................................................................................................242218.004361122102040
....................................................................................................................................................................................................AGAGACGCTCTGTACCTAGACT.................................................................................222190.503812679212460
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAC.................................................................................................................................222101.00202559413814
....................................................................................................................................................TCAGGTACTTAGTGACTCTCT..................................................................................................................................21278.501571299289
.................................................................................................................................................................................................TTGAGAGACGCTCTGTACCTAG....................................................................................22259.001181151020
....................................................................................................................................................................................................AGAGACGCTCTGTACCTAGA...................................................................................20258.501171042056
...................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGACC.................................................................................23255.501111032006
....................................................................................................................................................TCAGGTACTTAGTGACTCC....................................................................................................................................19255.001101091000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAT.................................................................................................................................22249.509922310433
......................................................................................................................................................AGGTACTTAGTGACTCTCAA.................................................................................................................................20246.00921460387
......................................................................................................................................................AGGTACTTAGTGACTCTCA..................................................................................................................................19245.509135002810
...................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGAA..................................................................................22244.5089782333
...................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGG...................................................................................21242.5085850000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------........................................................................................................................22241.5083082010
....................................................................................................................................................................................................AGAGACGCTCTGTACCTAGAC..................................................................................21236.00725714010
...................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGAAA.................................................................................23235.5071660113
....................................................................................................................................................................................................AGAGACGCTCTGTACCTAGACA.................................................................................22235.0070524356
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------........................................................................................................................23226.5053473111
.....................................................................................................................................................CAGGTACTTAGTGACTCTC...................................................................................................................................19226.0052250000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCG..................................................................................................................................21226.0052435031
...................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGACA.................................................................................23222.50451515618
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------........................................................................................................................23222.504513210110
..................................................................................................................................................................................................TGAGAGACGCTCTGTACCTAG....................................................................................21220.0040390001
.................................................................................................................................................................................................TTGAGAGACGCTCTGTACCT......................................................................................20219.5039380001
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------A.......................................................................................................................24219.00380240140
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------........................................................................................................................23218.0036031041
....................................................................................................................................................TCAGGTACTTAGTGACTCTCC..................................................................................................................................21217.0034243043
....................................................................................................................................................TCAGGTACTTAGTGACTC.....................................................................................................................................18214.0028260020
....................................................................................................................................................................................................AGAGACGCTCTGTACCTAGACTGT...............................................................................24213.5027141048
...................................................................................................................................................................................................GAGAGACGCTCTGTACCT......................................................................................18212.0024191022
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAT--------........................................................................................................................22212.0024024000
....................................................................................................................................................TCAGGTACTTAGTGACTCG....................................................................................................................................19212.0024240000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------T.......................................................................................................................24211.5023017060
..................................................................................................................................................................................................TGAGAGACGCTCTGTACCTAGA...................................................................................22211.0022153121
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAG.................................................................................................................................22210.502154093
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------A.......................................................................................................................23210.0020020000
.....................................................................................................................................................................................................GAGACGCTCTGTACCTAGACTGT...............................................................................2329.5019100027
....................................................................................................................................................................................................AGAGACGCTCTGTACCTAG....................................................................................1929.5019152002
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACT--------........................................................................................................................2329.501976060
....................................................................................................................................................................................................AGAGACGCTCTGTACCTAGACC.................................................................................2229.0018180000
.....................................................................................................................................................CAGGTACTTAGTGACTCT....................................................................................................................................1829.0018117000
...................................................................................................................................................CTCAGGTACTTAGTGACTCTCAA.................................................................................................................................2329.0018020115
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------T.......................................................................................................................2428.5017010070
...................................................................................................................................................CTCAGGTACTTAGTGACTCTCA..................................................................................................................................2228.5017111050
...................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGACG.................................................................................2328.0016150010
.....................................................................................................................................................................................................GAGACGCTCTGTACCTAGAC..................................................................................2028.0016151000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCATT--------........................................................................................................................2327.501546032
.......................................................................................................................................................GGTACTTAGTGACTCTCA..................................................................................................................................1827.5015015000
.....................................................................................................................................................................................................GAGACGCTCTGTACCTAGACT.................................................................................2126.501372211
...................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGACTT................................................................................2426.0012120000
......................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------........................................................................................................................2126.001204080
...................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGT...................................................................................2125.501191100
.......................................................................................................................................................GGTACTTAGTGACTCTCAA.................................................................................................................................1925.0010010000
.....................................................................................................................................................................................................GAGACGCTCTGTACCTAGACTG................................................................................2225.0010100000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAC.................................................................................................................................2125.0010010000
..................................................................................................................................................GCTCAGGTACTTAGTGACTCT....................................................................................................................................2125.001090010
...................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGACTG................................................................................2425.0010100000
................................................................................................................................................CAGCTCAGGTACTTAGTGACT......................................................................................................................................2125.001080011
....................................................................................................................................................................................................AGAGACGCTCTGTACCTAGACG.................................................................................2224.50980001
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAT.................................................................................................................................2123.50706010
..................................................................................................................................................................................................TGAGAGACGCTCTGTACCT......................................................................................1923.50770000
......................................................................................................................................................AGGTACTTAGTGACTCTC...................................................................................................................................1823.50704030
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------A.......................................................................................................................2423.00602040
...................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGAAC.................................................................................2323.00660000
....................................................................................................................................................TCAGGTACTTAGTGACTCTA...................................................................................................................................2023.00601032
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAC--------........................................................................................................................2223.00606000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------C.......................................................................................................................2422.50512020
........................................................................................................................................................GTACTTAGTGACTCTCAA.................................................................................................................................1822.50504001
....................................................................................................................................................................................................AGAGACGCTCTGTACCTAGACTT................................................................................2322.50520021
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------A.......................................................................................................................2422.50504010
......................................................................................................................................................................................................AGACGCTCTGTACCTAGACTGT...............................................................................2222.50540001
....................................................................................................................................................................................................AGAGACGCTCTGTACCTAGAAA.................................................................................2222.50540100
....................................................................................................................................................................................................AGAGACGCTCTGTACCTAGG...................................................................................2022.50550000
................................................................................................................................................CAGCTCAGGTACTTAGTGACTC.....................................................................................................................................2222.50511021
...................................................................................................................................................CTCAGGTACTTAGTGACTCTC...................................................................................................................................2122.00430010
.....................................................................................................................................................CAGGTACTTAGTGACTCTCACC--------........................................................................................................................2222.00422000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------A.......................................................................................................................2422.00404000
......................................................................................................................................................AGGTACTTAGTGACTCTCAAT--------........................................................................................................................2121.50301020
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------G.......................................................................................................................2421.50303000
..................................................................................................................................................GCTCAGGTACTTAGTGACTCTC...................................................................................................................................2221.50310011
...................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGACTA................................................................................2421.50311100
.................................................................................................................................................................................................TTGAGAGACGCTCTGTACCC......................................................................................2021.50330000
.................................................................................................................................................AGCTCAGGTACTTAGTGACTCT....................................................................................................................................2221.50320001
....................................................................................................................................................TCAGGTACTTAGTGACTCTCATC--------........................................................................................................................2321.50312000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------T.......................................................................................................................2421.50310020
droVir3
GTT-G---------TGC-----------------T-T-------------TTCC------GTGCTGAACTCCT------------C-------CC---GC---------CCTGCA-------------------CACCCCG---CTGCTCAGGTACTTAGTGACTCTCAATCATCTATTGCTT-TGCAT-ACCTTGAGGGTCGCTCTGTGCCTGTGCCGC-----CTGTGCTGCACAACCA-ACGAC------G-AGATGC-----ATACGTG--------ACCCT-G-----ACCGTGSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAA.................................................................................................................................221272895.002728952454118717295917123331229819712351817415258514218469394587761106145335921199510884168051752977124320252372236880520813010578806263162659849141315161031127311431191881115713381403307235628883452410324730998542884197276928073994393977392540282557746778
....................................................................................................................................................TCAGGTACTTAGTGACTCTCA..................................................................................................................................211189946.001899464336651623720644381887648014681992770452041105452212309265674241507138010595827508872725974459527141613439541992914623710542033253999399101291489171025163631151914201016901594946134102895061906919693768624202453207015952622225061532497283660346308
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA................................................................................................................................23139380.0039380374390226810516451111538183520820161650102920211318691499135759240619564513863112411361164910942794814220110501110100261215101263824477048991745898895571622722824141358958713881644
....................................................................................................................................................TCAGGTACTTAGTGACTCTC...................................................................................................................................20131429.00314293057201293324207114197951411215945725210926421713720340833152996573310337399687624721116760183994123015596087653680143326242757221129181741720194342324234810243693682981913103679503493849861029
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAC.................................................................................................................................22120137.00201379012066924777965231515158201233331549393213723422431631414610662138120321041461216910640133213013444232202231250173415222922252122672660622476637624158640152612911415
...................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGC..................................................................................22116013.001601323131339315813148181583694631425621101169056120525599161632175412310203710127210112327372625471081096588617377898238899172427222623571363157419252146293141415
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAAA...............................................................................................................................24113822.001382213424565175112100094311213505304442635103448577461434614361632540324919030000100000000000131005702352274227370218216592142106141536213289554578
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACA................................................................................................................................2318584.0085841535923302110013011000210015131316165422252205370509001000020001000200024000302614741540975200184174144142197743278301835898
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACC................................................................................................................................2316758.006758557186303212200000001301241187335465230156621200021160664254176125843411624100010423408221493507426398515705160203244414457
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT................................................................................................................................2314949.00494988906019316010013112427951010850759914615854462053818628310666391101010231101010200142100811095455334201551621027714511732660111276275
....................................................................................................................................................TCAGGTACTTAGTGACTCT....................................................................................................................................1914333.004333177654269915141200110415327124142362254404474648464142127651834626625711729622702131100221110111311233206122292181031251309764137115859228966
...................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTG...................................................................................2111776.001776101015658836516408350001056171563315176649437256503174311222428312711200011200111110000001228130145015171369778533716111251012
.....................................................................................................................................................CAGGTACTTAGTGACTCTCA..................................................................................................................................2011667.001667001481200000000012214220130129201113521311071810901000000000000000000001000322004022000135
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC................................................................................................................................2311649.00164913118314230000000011000431357128191041842362482110002010010100000401001362272371874346262351441004963157166
....................................................................................................................................................TCAGGTACTTAGTGACTCTCC..................................................................................................................................2111442.0014421751760915172012100005142198268433714253444465140511011210010203600000010100002100234100033231141317202330271035811
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAA.................................................................................................................................2111261.001261027923001000000024212202504137585525123212303452193210000000000000000000000000212137303210311
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAT.................................................................................................................................2211215.001215333276470100021137399026773835685853652672251326337302190000000000010000000150024347076576131361284310152336
......................................................................................................................................................AGGTACTTAGTGACTCTCAA.................................................................................................................................2011154.0011541159114470000012165667510131044767772116611217465866788684334900000000000000000001500223235202427030112
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACAA...............................................................................................................................2411020.0010200014310000000000000002004151322161111280202743231000000000000000000000000023111611608445287106732338682
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAATA...............................................................................................................................241979.009790081000000000002000000035101071313111413674010120011100000000010000722272261413220237112306776
......................................................................................................................................................AGGTACTTAGTGACTCTCA..................................................................................................................................191758.0075810940738010413015927396111520313130372615113636443834139840000000000000001000250022814303222412011
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAACA...............................................................................................................................241731.00731101000000000100000000001010000022031086200022101110000000000000010131164762922205035348592
...................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGCT.................................................................................231716.007161281030100010000002001001101000100000011000053252201002031160011120321251141017610511311011
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACCA...............................................................................................................................241599.0059911210000000000010000000010001200010223000000000000000000010000001111139532100153531439068
....................................................................................................................................................TCAGGTACTTAGTGACTCTCT..................................................................................................................................211584.0058430523001441010000784554282322561020102126755168000001000010100000009000257553987911145165101433
...................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGCC.................................................................................231553.005536374043000010000010004110000002030300000000094410423110100122860000000395267466412000100
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAATT...............................................................................................................................241494.0049402740000001000110002020213657324401311310200102011112211103000161273947429914147842340
....................................................................................................................................................TCAGGTACTTAGTGACT......................................................................................................................................171439.00439000000000000000000000000000000000000000000101000202210034170000121146437700000088695766
...................................................................................................................................................CTCAGGTACTTAGTGACTCTCAA.................................................................................................................................231427.00427005100000000003013310873422456452395301903042342431000000000000000000000000020000000001110
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAAT...............................................................................................................................241327.00327015200000000110100010003541159439818148111000000000000000000000005647512195718620741013
...................................................................................................................................................................................................GAGGGTCGCTCTGTGCCT......................................................................................181316.003162920001020000000000000040001000000000010000010100010000000000000000040723944524400000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG................................................................................................................................231244.0024400131010000001000000000004223002311410200000000000000000000010008633281310512611210672223
...................................................................................................................................................CTCAGGTACTTAGTGACTCTCA..................................................................................................................................221211.00211001510000000000310412027014926121710514100141891030000000000000000000000000021000100000000
....................................................................................................................................................TCAGGTACTTAGTGACTC.....................................................................................................................................181193.0019312851611120000003101000337517414323141422500000001000000000010101030111715878410011
...................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTG.....................................................................................191176.001760330101020000000000000013116010000000120000301123011010000000001011032241920152400000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACCT...............................................................................................................................241172.00172510000000000000000000000000001110000110010000010000000000100000201117131212877168551322
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAG.................................................................................................................................221171.00171311326110000000000000300556931512518873520000000000000000000000010995141001035359
.....................................................................................................................................................CAGGTACTTAGTGACTCTC...................................................................................................................................191149.00149101190000000000000001002101131121230032200000000000000000000000000000010000010001
......................................................................................................................................................AGGTACTTAGTGACTCTCAAA................................................................................................................................211141.001410070100000000011000010036739430993101519661000000000000000000000006320020013000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCG..................................................................................................................................211138.001381518531010000001030110021181132306005821120000000000000000000100011347130221210022
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAA................................................................................................................................221134.0013400780000000000000000000001174700460636410000000000000000000000002011000110000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAACT...............................................................................................................................241124.001241120000000000000000000000010300400000100000000000010000000000000098811777912833513
...................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGG..................................................................................221123.001239171040400000000000000000000000010010116000010000000000000004230000000864041000000
....................................................................................................................................................TCAGGTACTTAGTGACTCC....................................................................................................................................191116.00116178502000000000000000010000000100200000012000000000000000000001000000000001120000
...................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGT..................................................................................221106.001060031233010201010000000295234011521010221000000001000000000062101204242236603021
......................................................................................................................................................AGGTACTTAGTGACTCTC...................................................................................................................................18196.00960150102000001021022035074412123631678180000000000000000000001000010100030000100
..................................................................................................................................................................................................TGAGGGTCGCTCTGTGCCTGTG...................................................................................22188.00881121322090503110101011121148000010243020000000000000000000001000143103111310121
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAATCATC............................................................................................................................27187.008710000000000010000000000011010001001000000001000000000000000000010161112524000332227
....................................................................................................................................................TCAGGTACTTAGTGACTCTA...................................................................................................................................20179.0079004000400000000000000010001001011042523100000000000000000001001022110000000521519
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAC.................................................................................................................................21175.007500620000000000000000001000320001100000000000000000000000000000000000121000000001
..............................................................................................C---GC---------CCTGCA-------------------CACCCCG---CTGC.......................................................................................................................................................20167.0067007200000000000000000000000010000000001000000000010100000002000020001653810700001
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAATC...............................................................................................................................24166.00663017001000000000000020000000512100000000000001010000110001100000074324412012232
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAAAT..............................................................................................................................25162.006210200000000000000000000004410010102321000000000000000000000000010811320010152222
...................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGA..................................................................................22160.00601021100010000000000000010210010100021020000000000000000000002102326420102243225
....................................................................................................................................................TCAGGTACTTAGTGACTCTCATC................................................................................................................................23157.005770430000000000010000000010001092600000000000000000000000000000000022001041011110
...................................................................................................................................................CTCAGGTACTTAGTGACTCTCAAA................................................................................................................................24157.0057002000000000000000000010038103202505113101000000000000000000000000000000000000000
........................................................................................................................................................GTACTTAGTGACTCTCAA.................................................................................................................................18155.00550030100000000021000100002332130010111020000000000000000000000003047100000030135
....................................................................................................................................................TCAGGTACTTAGTGACTCTCATA................................................................................................................................23154.00541002100000000000000000011100330220200210000000000000000000000000099520101210110
......................................................................................................................................................AGGTACTTAGTGACTCTCAAAA...............................................................................................................................22153.00530010000000000000000000006420120320588330000000000000000000000002020000000010000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCCC.................................................................................................................................22148.004841103010000000010031421100000011001000011000000000000100000000000002400020020000
......................................................................................................................................................AGGTACTTAGTGACTCTCAC.................................................................................................................................20146.00460040010000000001000111121202100211230101000000000000000000000001511023310000000
..................................................................................................................................................................................................TGAGGGTCGCTCTGTGCCT......................................................................................19142.00420300000011000000000000000000000000000012000000000000000000000000001017765700000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAAG...............................................................................................................................24141.00410021000000000000000000000100000100030110000000000000000000000000097211001002125
..................................................................................................................................................................................................TGAGGGTCGCTCTGTGCCTGT....................................................................................21139.00390010020030100011000000120014100111011120000000000000000000011000023100001010021
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAAA...............................................................................................................................23139.003900260000000000000000000002001010000031100000000000000000000000000010000002100000
...................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGT....................................................................................20137.00371010001000100000000102104121300310010010000000000000000000001001121001111001010
....................................................................................................................................................TCAGGTACTTAGTGACTCTT...................................................................................................................................20136.00360210100000000001000001031210211310064210000000000000000000000000010000000000010
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACG................................................................................................................................23135.00353010000000000000000000000000010000100000000000000000000000000000266300101121213
....................................................................................................................................................................................................AGGGTCGCTCTGTGCCTGTGC..................................................................................21135.003500201000000000000000000000010001000000000000000000000000000012002000221110000000
...................................................................................................................................................CTCAGGTACTTAGTGACTCTC...................................................................................................................................21134.00340010000000000021010000112220220120424120000000000000000000001000000000000000000
.........................................................................................................................................................TACTTAGTGACTCTCAA.................................................................................................................................17131.00310000000000000000000000000000000000000000000000000000000000001002244300000080043
...................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGCA.................................................................................23130.00300040000010000000000000000000000000000000000000000000000000000010002054714000010
.....................................................................................................................................................CAGGTACTTAGTGACTCT....................................................................................................................................18129.002900250000000000000000000100000200100000000000000000000000000000000000000000000000
...................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGCCC................................................................................24129.00298000000000000000000000000000000100000000000000000000000000010000000036224200000
...................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTT...................................................................................21128.00280000000000000000010001001000000000000000000000000000000000000000000034724500000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAAAC..............................................................................................................................25127.00270020000000000000000000000000000000000000000000000000000000000001054600000040221
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAATCA..............................................................................................................................25127.00270011000000000000000000000000000000000000000000000000000000000000024212101501132
.............................................................................................CC---GC---------CCTGCA-------------------CACCCCG---CTGC.......................................................................................................................................................21126.00261001000000000000000000000000010000000000000000000000000000100000100072025500000
....................................................................................................................................................TCAGGTACTTAGTGACTCAA...................................................................................................................................20225.00500000000000000000000001010334212140182300000000000000000000000000503001002020100
...................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGCTT................................................................................24125.00251000000000000000000100000000000000000000000000000000000000000000000032338400000
..........................................................................................................................................................................TCATCTATTGCTT-TGCAT-ACCTT........................................................................................................23124.00240031000000000000000000102410000020000000000000000000000000000005400000000000010
....................................................................................................................................................................................................AGGGTCGCTCTGTGCCTGTGCT.................................................................................22124.00240000000000000000000000000001000000000000000001000111000000000000000021635200000
droMoj3
ACT-C---------AGGCTCC---------------A-------------TC-A------ATATA--G-----------CTAG-----AGAG-------------------TGCCCGATTCATGATGTCCAGCACACGCTG---CAGCTCAGGTACTTAGTGACTCTCAATCACATATTGCTT-TGCAT-ACTTTGAGGGTCGCTCTGTGCCTGTGCCGC-----CCGTGTTGCACACAGCCACACA--------ATTGT--------GAATT------------------CGAGT---SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
....................................................................................................................................................TCAGGTACTTAGTGACTCTCA..................................................................................................................................21149212.004921222712252526128423326104
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAA.................................................................................................................................22127227.002722714693157726641910170102
....................................................................................................................................................TCAGGTACTTAGTGACTCTC...................................................................................................................................2018978.0089782067150101142648830
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAC.................................................................................................................................2213124.00312488483242121102
...................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGC..................................................................................2212579.0025792089816543119092
.....................................................................................................................................................CAGGTACTTAGTGACTCTCA..................................................................................................................................2012226.0022262185502340
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA................................................................................................................................2312119.0021191495807105198
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAA.................................................................................................................................2111467.001467145810080
....................................................................................................................................................TCAGGTACTTAGTGACTCT....................................................................................................................................191813.008135491324182081
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAAA...............................................................................................................................241629.00629549915641
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACA................................................................................................................................231485.0048515016013180
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT................................................................................................................................231445.0044515112032763
.....................................................................................................................................................CAGGTACTTAGTGACTCTC...................................................................................................................................191221.00221209000120
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC................................................................................................................................231192.00192364001520
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACC................................................................................................................................231178.0017886101630
...................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTG...................................................................................211160.0016045392812306
......................................................................................................................................................AGGTACTTAGTGACTCTCA..................................................................................................................................191150.001501003811100
...................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGG..................................................................................221149.0014901412600
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAA................................................................................................................................221147.0014714700000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCT..................................................................................................................................211139.00139524410690
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAT.................................................................................................................................221129.0012953115672
.............................................................................................................................TGTCCAGCACACGCTG---CAGC.......................................................................................................................................................201106.0010613000930
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACAA...............................................................................................................................24188.00888210050
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAC.................................................................................................................................21186.00868600000
......................................................................................................................................................AGGTACTTAGTGACTCTCAA.................................................................................................................................20186.008663121730
....................................................................................................................................................TCAGGTACTTAGTGACTCTCC..................................................................................................................................21172.00721625111190
....................................................................................................................................................TCAGGTACTTAGTGACTCC....................................................................................................................................19170.00700000700
.....................................................................................................................................................CAGGTACTTAGTGACTCT....................................................................................................................................18158.00585800000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAAA...............................................................................................................................23149.00494700020
...................................................................................................................................................CTCAGGTACTTAGTGACTCTCA..................................................................................................................................22143.004316200250
...................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGCC.................................................................................23143.00430364300
....................................................................................................................................................TCAGGTACTTAGTGACTCTCG..................................................................................................................................21137.00377411231
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAATT...............................................................................................................................24135.00357300250
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAG.................................................................................................................................22133.00332431050
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAACA...............................................................................................................................24131.003111100190
............................................................................................................................ATGTCCAGCACACGCTG---CAGC.......................................................................................................................................................21129.00292000270
....................................................................................................................................................................................................AGGGTCGCTCTGTGCCTGTGC..................................................................................21123.00231710050
...................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGT..................................................................................22122.00221141330
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACCA...............................................................................................................................24122.00225000170
....................................................................................................................................................TCAGGTACTTAGTGACTCTA...................................................................................................................................20120.00201700030
....................................................................................................................................................TCAGGTACTTAGTGACTC.....................................................................................................................................18120.00207000130
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG................................................................................................................................23119.00191500040
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAATA...............................................................................................................................24118.0018900090
......................................................................................................................................................AGGTACTTAGTGACTCTC...................................................................................................................................18118.0018641070
...................................................................................................................................................CTCAGGTACTTAGTGACTCTCAA.................................................................................................................................23117.00171310030
.......................................................................................................................................................GGTACTTAGTGACTCTCA..................................................................................................................................18116.00161400020
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAAT...............................................................................................................................24114.00143000110
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAT................................................................................................................................22113.00131300000
...................................................................................................................................................CTCAGGTACTTAGTGACTCTC...................................................................................................................................21111.0011300080
.......................................................................................................................................................GGTACTTAGTGACTCTCAA.................................................................................................................................19110.00101000000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCACAA...............................................................................................................................23110.00101000000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCACA................................................................................................................................2219.009900000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAATC...............................................................................................................................2419.009200061
....................................................................................................................................................TCAGGTACTTAGTGACTCTCATC................................................................................................................................2317.007401020
....................................................................................................................................................TCAGGTACTTAGTGACTCTT...................................................................................................................................2017.007100060
......................................................................................................................................................AGGTACTTAGTGACTCTCAC.................................................................................................................................2017.007410110
....................................................................................................................................................TCAGGTACTTAGTGACTCTCCC.................................................................................................................................2217.007321010
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACCT...............................................................................................................................2416.006010050
..................................................................................................................................................................................................TGAGGGTCGCTCTGTGCCTGTG...................................................................................2216.006130020
...................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGCT.................................................................................2316.006120030
...................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGA..................................................................................2215.005100031
..........................................................................................................................................................................TCACATATTGCTT-TGCAT-ACTTT........................................................................................................2315.005100040
....................................................................................................................................................TCAGGTACTTAGTGACTCTCATA................................................................................................................................2315.005100040
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAACT...............................................................................................................................2415.005000050
......................................................................................................................................................AGGTACTTAGTGACTCTCAAA................................................................................................................................2115.005500000
.....................................................................................................................................................................................................GGGTCGCTCTGTGCCTGTGC..................................................................................2014.004200020
....................................................................................................................................................TCAGGTACTTAGTGACTCAA...................................................................................................................................2014.004110020
droGri2
AAA-A---------AG--CGAAAGATTCGTTCGTCGATTGGTTCTTATTCTTGT--GT--TAATCATTATCAGTGTTAAAT---GTG-GAAAAAC---CAATCCAATCCGCTGCA-------------------CACGTTG---CTGCTCAGGTACTTAGTGACTCTCAATTCAACATTGTAT-TGCACGCCTTTGAGGGTCGCTCTGTGCCTGTGTTGC-----ACGTGTTGCATTCACA-CCATC--------CGAGTGATTTGTGTCCTTTGAGTGTCG-----A-----TTTGTGSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
....................................................................................................................................................TCAGGTACTTAGTGACTCTCA..................................................................................................................................2111712.001712169715
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAA.................................................................................................................................221530.0053051812
....................................................................................................................................................TCAGGTACTTAGTGACTCTC...................................................................................................................................201204.002042022
.....................................................................................................................................................CAGGTACTTAGTGACTCTCA..................................................................................................................................201185.001851850
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAC.................................................................................................................................22184.0084840
...................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGT..................................................................................22168.0068608
....................................................................................................................................................TCAGGTACTTAGTGACTCT....................................................................................................................................19165.0065650
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAA.................................................................................................................................21149.0049490
...................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTG...................................................................................21117.0017161
....................................................................................................................................................TCAGGTACTTAGTGACTCTCT..................................................................................................................................21115.0015141
.....................................................................................................................................................CAGGTACTTAGTGACTCTC...................................................................................................................................19114.0014140
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA................................................................................................................................23112.0012120
..........................................................................................................................................................................TTCAACATTGTAT-TGCACGCCTTT........................................................................................................2419.00990
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAC.................................................................................................................................2117.00770
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAT.................................................................................................................................2217.00770
......................................................................................................................................................AGGTACTTAGTGACTCTCA..................................................................................................................................1917.00770
.....................................................................................................................................................CAGGTACTTAGTGACTCT....................................................................................................................................1815.00550
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT................................................................................................................................2315.00550
....................................................................................................................................................................................................AGGGTCGCTCTGTGCCTGTGT..................................................................................2115.00550
..........................................................................................................................................................................TTCAACATTGTAT-TGCACGCCTT.........................................................................................................2314.00440
......................................................................................................................................................AGGTACTTAGTGACTCTCAA.................................................................................................................................2013.00330
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC................................................................................................................................2313.00330
.....................................................................................................................................................CAGGTACTTAGTGACTCTCT..................................................................................................................................2013.00330
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAATT...............................................................................................................................2413.00330
...................................................................................................................................................CTCAGGTACTTAGTGACTCTCA..................................................................................................................................2212.00220
...................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTG.....................................................................................1912.00220
......................................................................................................................................................AGGTACTTAGTGACTCTC...................................................................................................................................1812.00220
....................................................................................................................................................TCAGGTACTTAGTGACTCTG...................................................................................................................................2011.00110
...................................................................................................................................................................................................GAGGGTCGCTCTGTGCCT......................................................................................1811.00110
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAT................................................................................................................................2211.00110
....................................................................................................................................................TCAGGTACTTAGTGACTT.....................................................................................................................................1811.00110
....................................................................................................................................................TCAGGTACTTAGTGACTCTCC..................................................................................................................................2111.00110
.................................................................................................................................................TGCTCAGGTACTTAGTGACT......................................................................................................................................2011.00110
..........................................................................................................................................................................TTCAACATTGTAT-TGCACGCCT..........................................................................................................2211.00110
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACA................................................................................................................................2311.00110
...................................................................................................................................................CTCAGGTACTTAGTGACTCTC...................................................................................................................................2111.00110
....................................................................................................................................................TCAGGTACTTAGTGACTC.....................................................................................................................................1811.00110
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAAAA..............................................................................................................................2411.00110
.................................................................................................................................................................................................TTGAGGGTCGCTCTGTGCCT......................................................................................2011.00101
...................................................................................................................................................CTCAGGTACTTAGTGACTCT....................................................................................................................................2011.00110
...................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGTT.................................................................................2311.00110
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAATTC..............................................................................................................................2511.00110
....................................................................................................................................................TCAGGTACTTAGTGACTCG....................................................................................................................................1911.00110
....................................................................................................................................................................................................AGGGTCGCTCTGTGCCTGTG...................................................................................2011.00110
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAGG...............................................................................................................................2411.00110
............................................................................................................................................................................................CGCCTTTGAGGGTCGCTCTG...........................................................................................2011.00110
...................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGTTT................................................................................2411.00110
..............................................................................................................................................................................................CCTTTGAGGGTCGCTCTGT..........................................................................................1911.00110
...................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTT...................................................................................2111.00110
.......................................................................................................................................................GGTACTTAGTGACTCTCA..................................................................................................................................1811.00110
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAAA...............................................................................................................................2411.00110
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAATGG..............................................................................................................................2511.00110
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAGCA...............................................................................................................................2420.50110
droAna3
AAT-G---------GAAATCTATTC--CG-------ATTGG---------A--------------------TG------------TG-AAAGTGC---CA---------GAAGTC-------------------CACTTGG---TAGCTCAGGTACTTAGTGACTCTCAAT--------GCAT-TTGAC-ATTTTGGGAGCCACTTTGTGCCTGGGCCAT-----CAGTGCGACTATATCT-TCTAT------T-AAAAAA-ATTGTTTAAAATATATGGTA-----T-----ATAGTGSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
....................................................................................................................................................TCAGGTACTTAGTGACTCTCA..................................................................................................................................21115411.001541194572974218513150614
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAA.................................................................................................................................22110973.001097377351114124817523678
...................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGC..................................................................................2213408.0034082552465595522705
....................................................................................................................................................TCAGGTACTTAGTGACTCTC...................................................................................................................................2013234.003234556212522715113162
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------........................................................................................................................2311146.001146606239140172142
.....................................................................................................................................................CAGGTACTTAGTGACTCTCA..................................................................................................................................201922.0092291543000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAA.................................................................................................................................211740.0074073910000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAC.................................................................................................................................221522.00522169272552222
....................................................................................................................................................TCAGGTACTTAGTGACTCT....................................................................................................................................191352.00352167741855137
...................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGG...................................................................................211347.00347170439511460
...................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGCT.................................................................................231246.0024670221234
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------A.......................................................................................................................241218.0021810356391118
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------........................................................................................................................231164.001642312513012
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAT.................................................................................................................................221105.0010571159604
...................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGG....................................................................................20196.0096502014318
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------........................................................................................................................23191.0091374311000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------........................................................................................................................23178.007848224004
......................................................................................................................................................AGGTACTTAGTGACTCTCA..................................................................................................................................19177.007759213300
....................................................................................................................................................TCAGGTACTTAGTGACTCTCT..................................................................................................................................21172.007240106709
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------........................................................................................................................23165.0065154010000
...................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGCA.................................................................................23164.00643003256
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------........................................................................................................................22160.00606000000
......................................................................................................................................................AGGTACTTAGTGACTCTCAA.................................................................................................................................20160.006047010300
...................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGT..................................................................................22151.005110700925
....................................................................................................................................................TCAGGTACTTAGTGACTCTCC..................................................................................................................................21150.00502637113
.....................................................................................................................................................CAGGTACTTAGTGACTCTC...................................................................................................................................19149.00494900000
....................................................................................................................................................................................................GGAGCCACTTTGTGCCTGGGC..................................................................................21146.004621120022
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------AA......................................................................................................................25140.0040181011001
...................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGA..................................................................................22139.00392311230
.................................................................................................................................................................................................TTGGGAGCCACTTTGTGCCTGG....................................................................................22139.00398218002
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------........................................................................................................................23134.00342351005
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAG.................................................................................................................................22133.00333001002
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------A.......................................................................................................................24128.00283241000
....................................................................................................................................................TCAGGTACTTAGTGACTCC....................................................................................................................................19128.00280280000
...................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGCC.................................................................................23123.00232125013
....................................................................................................................................................................................................GGAGCCACTTTGTGCCTGGG...................................................................................20122.00222200000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCG..................................................................................................................................21121.0021435414
...................................................................................................................................................CTCAGGTACTTAGTGACTCTCA..................................................................................................................................22117.0017845000
....................................................................................................................................................................................................GGAGCCACTTTGTGCCTGGGCC.................................................................................22114.0014530105
...................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGT...................................................................................21114.0014520115
.................................................................................................................................................................................................TTGGGAGCCACTTTGTGCCTGGG...................................................................................23113.0013332005
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------A.......................................................................................................................24113.00132101000
.....................................................................................................................................................CAGGTACTTAGTGACTCT....................................................................................................................................18113.00131300000
...................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGTT.................................................................................23112.0012300108
....................................................................................................................................................TCAGGTACTTAGTGACTC.....................................................................................................................................18112.0012451200
...................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGCTT................................................................................24111.0011110009
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAC.................................................................................................................................21111.00111010000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAT--------........................................................................................................................22110.00101000000
...................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGG..................................................................................22110.0010003403
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------T.......................................................................................................................24110.0010630010
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------T.......................................................................................................................24110.0010901000
.......................................................................................................................................................GGTACTTAGTGACTCTCA..................................................................................................................................18110.00101000000
......................................................................................................................................................AGGTACTTAGTGACTCTC...................................................................................................................................18110.0010613000
...................................................................................................................................................................................................GGGAGCCACTTTGTGCCTG.....................................................................................1919.009700200
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------A.......................................................................................................................2318.008800000
...................................................................................................................................................CTCAGGTACTTAGTGACTCTCAA.................................................................................................................................2318.008512000
..............................................................................................C---CA---------GAAGTC-------------------CACTTGG---TAGC.......................................................................................................................................................2018.008022103
....................................................................................................................................................TCAGGTACTTAGTGACTCTA...................................................................................................................................2018.008510002
....................................................................................................................................................TCAGGTACTTAGTGACTCTCATA--------........................................................................................................................2318.008321002
....................................................................................................................................................................................................GGAGCCACTTTGTGCCTGG....................................................................................1918.008620000
....................................................................................................................................................................................................GGAGCCACTTTGTGCCTGGGCT.................................................................................2218.008020006
....................................................................................................................................................TCAGGTACTTAGTGACTCTT...................................................................................................................................2017.007240100
...................................................................................................................................................CTCAGGTACTTAGTGACTCTC...................................................................................................................................2117.007240100
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------C.......................................................................................................................2417.007601000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAT.................................................................................................................................2117.007700000
....................................................................................................................................................................................................GGAGCCACTTTGTGCCTGGGCA.................................................................................2217.007002005
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------A.......................................................................................................................2416.006420000
........................................................................................................................................................GTACTTAGTGACTCTCAA.................................................................................................................................1815.005500000
...................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGC...................................................................................2115.005020003
.......................................................................................................................................................GGTACTTAGTGACTCTCAA.................................................................................................................................1915.005500000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCT..................................................................................................................................2015.005500000
...................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGTTT................................................................................2415.005200012
..................................................................................................CA---------GAAGTC-------------------CACTTGG---TAGC.......................................................................................................................................................1915.005040001
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAC--------........................................................................................................................2214.004400000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCACA--------........................................................................................................................2214.004310000
...................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGTA.................................................................................2314.004010102
..................................................................................................................................................................................................TGGGAGCCACTTTGTGCCTGGGC..................................................................................2314.004200002
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAG--------........................................................................................................................2214.004400000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------A.......................................................................................................................2414.004211000
.................................................................................................................................................................................................TTGGGAGCCACTTTGTGCCTG.....................................................................................2114.004130000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------G.......................................................................................................................2414.004400000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------AA......................................................................................................................2413.003300000
......................................................................................................................................................AGGTACTTAGTGACTCTCAC.................................................................................................................................2013.003201000
...................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGAA.................................................................................2313.003030000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------T.......................................................................................................................2313.003300000
.....................................................................................................................................................................................................GAGCCACTTTGTGCCTGGGC..................................................................................2013.003100002
......................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------........................................................................................................................2113.003201000
droBip1
ATT-A---------AATGG-------------------------------AAAA------ATATT-------G------TGAAAGTTGAC---CC---GA---------AAAGTC-------------------CACTTAA---TGGCTCAGGTACTTAGTGACTCTCAAT--------GTAT-TTGAC-ATTTTGAGAGCCACTTTGTGCCTGGGCCAT-----CAGTGTGGCTATATCT-TCTAT----------------------------------ATAAT-C-----ATGGTASizeHit CountTotal NormTotal
No Reads
droKik1
TGT----------------G--------------------------TTT--------------------CAAG------------TG-CTGTA-A-TACC---------AGTGCC-------------------CACTTGATGATGGCTCAGGTACTTAGTGACTCTCAAA--------TGCCTTGAAAAGTTTTGAGAGTCTCTCTGTGCCTAGGCTGT-----AGGTGAGGCAAACTCA-ACTAC-----AT-AC-------------------AT----CAAT-T-----AAATTASizeHit CountTotal NormTotal
No Reads
droFic1
TTT-A----------AAGTGA-------A-------TATGG---------ATCA------GTGGCTATAGCAG------------TG-CATATTT---TC---------TGTGCT-------------------TGCTCGA---TGGCTCAGGTACTTAGTGACTCTCAAT--------GGAT-TTCAC-ATTTTGGGAGTCGCTCTGTGCCTGTGCTGC-----AAGTAAGACATTCTCCTACAAA------AAAAAGTG-----TTAAAAATAAGT----TGAT-T-----ACAACASizeHit CountTotal NormTotal
No Reads
droEle1
ACAAA-------AAGAAGTGC-------A-------CTTGG---------ATA----TCAGTATATTTATAAGCG----------TGCATTTGAT---TT---------TAAGCC-------------------CACTTGA---TTGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TTGAC-ATTTTGGGAGTCGCTCTGTGCCTGTGCTGC-----CAGTGAAGCAATGTCT-ACAGG------T-AAAGTG-----ATAAATATAGTT----TCATCACAACCAACATGSizeHit CountTotal NormTotal
No Reads
droRho1
ATA-C---------AAAGTGC-------A-------TATGG---------AACAGTGTCAGTGTATATCTCAGTA---------GTGCATATATT---TT---------TGAGCC-------------------CACTCGA---TGGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TCGAC-ATTTTGGGAGTCGCTCTGTGCCTGTGCTGC-----CAGTGAAGCATTCTCC-CCATT------A-AAAGTG-----TTAACTATAATTG---CAAT-A-----AAAGCASizeHit CountTotal NormTotal
No Reads
droBia1
TCC-TTATACATGCAAAGTGC-------T-------TGTGG---------ATAA------GTGTT-TTATCAGTG----------GA-AAATGAA---TT---------CAAGCT-------------------TACTAGG---TGGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TCGAC-ACTTTGGGACTCGCTCTGTACCTGCGCTGC-----CGGTGAGGCCCTCTCT-ACAAAGAAATAC-AAAA------------------TAGT------A-----TATATASizeHit CountTotal NormTotal
No Reads
droTak1
TTA-T-----A---TGAGTGT-------A-------TAT------------------------TATATATCAG------------TG-CATATCT-CTTT---------TAAGCC-------------------CACTCGA---TGGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TCGAC-ATTTTGGGAGTCGCTCTGTGCCTGCGCCGC-----CAGTAAGGCATTCTCC-ACAGA--A--AT-AAAGT--------------------------------------GSizeHit CountTotal NormTotal
No Reads
droEug1
ATA-A---------AG--TAC-------A-------AATGG---------ATCA------ATGTG----CAAG------------TG-ACTATTT---TT---------CAAGTC-------------------CACTTAA---TGGCTCAGGTACTTAGTGACTCTCAAT--------GATT-TTGAC-AATTTGGGAGTCGCTCTGTGCCTGTGCTGC-----TAGTGAGGCAATCTTCTACAAA------T-AAAGTG-----A---------------------------ATTTASizeHit CountTotal NormTotal
No Reads
dm3
TTT-A---------GTGGTG--------------------------TTTCTTGT------GTGTTTAAATCAG------------TG-AATAGTT---TA---------AAAGTC-------------------CACTCGA---TGGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TTGAC-ATTTTGGGGGTCACTCTGTGCCTGTGCTGC-----CAGTGGGACATAATCT-ACAAA------T-AAAGTG-----ATAA---TCAGTGATA---------TCAGTGAASizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
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.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------........................................................................................................................221202.0020200000000000000000000000000000000000100000010000101000000000000000000000000002102000000410000000000000001142120000001001000000100010000000300001200001110100010001006000120100020202030000104000000000000000000000000371010014513141147100000000100000000000000000010000001100071213400041000110000000002300000001000000000000000000000110010
....................................................................................................................................................TCAGGTACTTAGTGACTCTA...................................................................................................................................201178.0017800000000000000000000002002100000003000010130000011300000000000000000000000001217790010000000000000000000001110000000000000011100000000000000032400112010000000000000000000100000100002000000221000000100000000000000001001123111322000200000000100000101210000200100006342201471021130102201100000000000000000000400000000100200000003010
...................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTT...................................................................................211154.00154000000010000001000000000000000000000000001000000001000000000000000000000000011100130005600000000000020041111270011003000000000000011000000000000000001100000000000000000130100000000000000000000000000000000000000000000000042236106200000000000022222000100300400110000000040000100000000000000000100200030050000000000000000100000000000
...................................................................................................................................................................................................GGGGGTCACTCTGTGCCTG.....................................................................................191144.00144000000000000001000000000000100000010000200000010000000000000000000000000000033140000000600100101010206056143701010030000000000000000020000001000000000000000000000000002100201004002801000100000000000000000000000000000000000010010000000000000000000100000000000000001000000000000000000000001000100000000020000000000000000000000000000
.....................................................................................................................................................CAGGTACTTAGTGACTCTC...................................................................................................................................191138.0013800000000000000000000000000000000000001000000000010100000000000000000000000001516121000000010000000000000000141010000000000001010000100001000000000000000000000000010000000170100120201040000105000000000000000000000000100010102110301000000000000000000000000000010002000111000131115000000100010000000000000021000000000000000000000001000
...................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGCT.................................................................................231137.001370000000000000100000000000001000000000000000000000000000051000000000000000000120000100145002003020001010925221002000010000000100000001100000000000000010000000000000000200001220001211000005000000000000000000000000000000021437531000001000000010101010101000000000100000100010001010010000000000000101010000000001000000000000000000000
.............................................................................................TT---TA---------AAAGTC-------------------CACTCGA---TGGC.......................................................................................................................................................211129.001290000000000000000000000000000000000011001000100001120000000000000000000000000000000000000000000000000000000000000000000000000000000000011000200000000001100000000000000000000000000000000000000000000000000000000000001000222913196724000000000000010000001000000100101001000100000000000000000000000000100000020000010000000000000000001000
....................................................................................................................................................TCAGGTACTTAGTGACTCA....................................................................................................................................191121.0012100000000000000000000000000000000000101010100000000000000000000000000000000006834020000000000000100000000000000000000000000000000000000100000100001100000000000000000023030001702222001000000022000000010000040001000120020001102022000000000000000000000000000100000000110000041002000000000000000000200000001000000000100000000000000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------A.......................................................................................................................241116.001160000000000000000000000000000000000000000000000001000000000000000000000000000511100000000000000000000000001000000000000000100030000000000000011100011011000000000000000002000000000000000010001000100000000000000000000000114541110812100010000000100000000000000000000002000001030212060000000000000000200000001000100000000000000001000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACG--------........................................................................................................................231112.001120000000000000000000000000000000000000001000001000010100000000000000000000000554500000000000000000000000000000000000030000101000100011001100100001000100000000000000000000000000000000000000000000000000000000000000000100421488531001000000011100001000000000011000010200002406021100000000000000002000000001000000000000000000000000100
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------T.......................................................................................................................241109.001090000000000000000000000000000000000200000001000000310000000000000000000000000210200000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000000100000000000001200133681211117000000000001010001000000010000000001000000020200010000000000000001101000000001100000000000000000122000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAT--------........................................................................................................................221107.001070000000000000000000000000000000000000000001000000000000000000000000000000000153216270000002000000000000000001500000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000100000000001200000000000000000000000000000000000000000000000011000000000000000000000000010000000000000000000000000000
droSim2
TTT-A---------GTGGTG--------------------------ACTTTAGT------GTGTTTAAATCAG------------TG-AATAGTT---TA---------AAAGTC-------------------CACTCGA---TGGCTCAGGTACTTAGTGACTCTCAAT--------GCCT-TTGAC-ATTTTGGGGGTCACTCTGTGCCTGTGCTGC-----CAGTGGGACATAATCT-ACAAA------T-AAAGTG-----ATAAGTA------------------CCAGTGAASizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAA.................................................................................................................................221702880.00702880384243331751854500147767144040204615173123606812351116217
....................................................................................................................................................TCAGGTACTTAGTGACTCTCA..................................................................................................................................211329182.00329182493358951311393000615866195610547270084287525062990001
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------........................................................................................................................231150060.0015006012511317742150003182528191506313430265613933004
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------A.......................................................................................................................24145517.00455171322312836500817170921771211778941533001
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAC.................................................................................................................................22144759.004475910172159174780011428111571122081001359002000
....................................................................................................................................................TCAGGTACTTAGTGACTCTC...................................................................................................................................20138898.00388984459490530670700307935531054995161078142513001
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------AA......................................................................................................................25116623.0016623295378700281624166908427149401000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------........................................................................................................................23110379.0010379328610651994260014811263720499212201001
....................................................................................................................................................TCAGGTACTTAGTGACTCT....................................................................................................................................1919389.009389461242219088200272269906752152904001
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------........................................................................................................................2313809.003809403893133007135661158103527600000
....................................................................................................................................................TCAGGTACTTAGTGACT......................................................................................................................................1713583.0035830000004546971623232000100
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------........................................................................................................................2313096.00309615547348480071369169138671000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAT.................................................................................................................................2212564.002564632248770040643671477520300000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------........................................................................................................................2312347.00234743108038005665206104648710000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAA.................................................................................................................................2111942.001942102175900192954687300000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCA..................................................................................................................................2011318.001318304122300111139233100000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------A.......................................................................................................................2411307.0013070059002252024853719100000
...................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGC..................................................................................221798.007982023320028631413497773010
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------........................................................................................................................231783.007831801132002041981751403200000
....................................................................................................................................................TCAGGTACTTAGTGACTCC....................................................................................................................................191675.006754833115900001001000000
....................................................................................................................................................TCAGGTACTTAGTGACTC.....................................................................................................................................181623.0062373224120022257354307101002
......................................................................................................................................................AGGTACTTAGTGACTCTCAA.................................................................................................................................201594.0059420286007574155117701300000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCT..................................................................................................................................211557.005572735550800342746504901000
...................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTG...................................................................................211480.00480200320019818062451014000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCG..................................................................................................................................211458.0045895221413900505231213400000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------A.......................................................................................................................241445.0044502320083621671223001000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------T.......................................................................................................................241433.004331023500110561241145003001
..........................................................................................................................................................ACTTAGTGACTCTCAA.................................................................................................................................161402.004020000001095793233000000
......................................................................................................................................................AGGTACTTAGTGACTCTCA..................................................................................................................................191284.00284403470022436244421700000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------A.......................................................................................................................241275.002753262004448109601000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------A.......................................................................................................................241272.002723214600636164571100000
.........................................................................................................................................................TACTTAGTGACTCTCAA.................................................................................................................................171265.0026500000038371083943000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------C.......................................................................................................................241241.002412013400554972451000000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------........................................................................................................................221233.0023300017300121917111000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCC..................................................................................................................................211192.0019252691001211443731700000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAG.................................................................................................................................221178.00178123178001113454225200000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------AA......................................................................................................................251175.00175001200263170440001000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------T.......................................................................................................................241167.00167057600204435491000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------AAA.....................................................................................................................261159.00159001000222462481010000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCATA--------........................................................................................................................231147.00147213000382952220000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------T.......................................................................................................................241124.00124195614000135881000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------AA......................................................................................................................251119.00119000000201448361000000
....................................................................................................................................................TCAGGTACTTAGTGACTCG....................................................................................................................................191113.001136194300000000000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------T.......................................................................................................................241106.001061101700029212170000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------A.......................................................................................................................241104.00104306200231834180000000
......................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------........................................................................................................................211103.001030006001020362110000000
....................................................................................................................................................TCAGGTACTTAGTGA........................................................................................................................................15292.0018400000021311418100000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACG--------........................................................................................................................23189.00891061700010191870200000
........................................................................................................................................................GTACTTAGTGACTCTCAA.................................................................................................................................18177.00770000005261054000000
.....................................................................................................................................................CAGGTACTTAGTGACTCTC...................................................................................................................................19173.0073104600000422000000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAC.................................................................................................................................21170.00700004800071041000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCATA--------A.......................................................................................................................24168.006800010091228180000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTA...................................................................................................................................20165.00651032002930171000000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------A.......................................................................................................................23159.0059001390013950100000
.........................................................................................................................................................TACTTAGTGACTCTCA..................................................................................................................................16158.00580000006628513000000
...................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGA..................................................................................22156.00560010003015315001000
...........................................................................................................................................................CTTAGTGACTCTCAA.................................................................................................................................15156.0056000000463835000000
..........................................................................................................................................................ACTTAGTGACTCTCA..................................................................................................................................15152.00520000002171725000000
...................................................................................................................................................CTCAGGTACTTAGTGACTCTCAA.................................................................................................................................23146.00462012000251042000000
.......................................................................................................................................................GGTACTTAGTGACTCTCAA.................................................................................................................................19145.00450009000311814000000
...................................................................................................................................................................................................GGGGGTCACTCTGTGCCT......................................................................................18145.00451623300000003000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------AT......................................................................................................................25144.00441000008517130000000
....................................................................................................................................................TCAGGTACTTAGTGAC.......................................................................................................................................16141.0041000000248615001014
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------TT......................................................................................................................25141.00410010007710160000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------TA......................................................................................................................25141.00410100001271650000000
......................................................................................................................................................AGGTACTTAGTGACTCTCAC.................................................................................................................................20135.00351003001041250000000
..........................................................................................................................................................ACTTAGTGACTCTCAAA--------........................................................................................................................17234.506900000053131434000000
......................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------A.......................................................................................................................22134.0034000100569121000000
......................................................................................................................................................AGGTACTTAGTGACTCTC...................................................................................................................................18133.003360220023548100000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------GCC.....................................................................................................................26132.0032111800042330000000
...................................................................................................................................................CTCAGGTACTTAGTGACTCTCA..................................................................................................................................22129.0029101100051442100000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------GCCT-...................................................................................................................27127.0027511500004200000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTT...................................................................................................................................20127.0027131130021321000000
.........................................................................................................................................................TACTTAGTGACTCTCAAA--------........................................................................................................................18226.5053100000892834000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCGC.................................................................................................................................22125.0025000000108330100000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------TAA.....................................................................................................................26123.0023000000137120000000
........................................................................................................................................................GTACTTAGTGACTCTCA..................................................................................................................................17123.0023000000004217000000
......................................................................................................................................................AGGTACTTAGTGACT......................................................................................................................................15122.0022000000000022000000
....................................................................................................................................................TCAGGTACTTAGTGACTCAA...................................................................................................................................20122.002210000028542000000
...................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGG..................................................................................22122.0022000000000002200000
droSec2
ATTTA---------GTGGTG--------------------------ACTTTAGT------GTGTTTAAATCAG------------TG-AACAGTT---TA---------AAATTC-------------------CACTCGA---TGGCTCAGGTACTTAGTGACTCTCAAT--------GCCT-TTGAC-ATTTTGGGGGTCACTCTGTGCCTGTGCTGC-----CAGTGGGACATAATCT-ACAAA------T-AAAGGG-----ATAAGTA------------------CCAGTGAASizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAA.................................................................................................................................22134533.00345333133312418161260
....................................................................................................................................................TCAGGTACTTAGTGACTCTCA..................................................................................................................................21124680.0024680220369815431003
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAA.................................................................................................................................2112835.0028352832012
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------........................................................................................................................2312680.002680223615183246
.....................................................................................................................................................CAGGTACTTAGTGACTCTCA..................................................................................................................................2011965.0019651963011
....................................................................................................................................................TCAGGTACTTAGTGACTCTC...................................................................................................................................2011531.00153185328366284
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAC.................................................................................................................................2211430.0014301289104982
...................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGC..................................................................................221315.0031521554253
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------A.......................................................................................................................241312.0031225512432
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------........................................................................................................................231250.002502244184
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------........................................................................................................................231237.0023715862053
....................................................................................................................................................TCAGGTACTTAGTGACTCT....................................................................................................................................191218.0021813604636
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------........................................................................................................................221205.00205205000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAT.................................................................................................................................221198.0019817301213
...................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTG...................................................................................211197.001971821311
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------........................................................................................................................231144.00144134073
......................................................................................................................................................AGGTACTTAGTGACTCTCAA.................................................................................................................................201144.001441181187
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAC.................................................................................................................................211123.00123123000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------........................................................................................................................231119.00119111062
......................................................................................................................................................AGGTACTTAGTGACTCTCA..................................................................................................................................19192.009275098
....................................................................................................................................................TCAGGTACTTAGTGACTCTCG..................................................................................................................................21186.008686000
.....................................................................................................................................................CAGGTACTTAGTGACTCTC...................................................................................................................................19179.007978010
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------........................................................................................................................23170.007059083
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------AA......................................................................................................................25156.005643085
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------A.......................................................................................................................24134.003433001
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------A.......................................................................................................................23127.002727000
...................................................................................................................................................CTCAGGTACTTAGTGACTCTCAA.................................................................................................................................23124.002423010
.......................................................................................................................................................GGTACTTAGTGACTCTCA..................................................................................................................................18124.002424000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCT..................................................................................................................................21123.002312218
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAT.................................................................................................................................21121.002121000
....................................................................................................................................................................................................GGGGTCACTCTGTGCCTGTG...................................................................................20120.002020000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAG.................................................................................................................................22119.001918001
...................................................................................................................................................CTCAGGTACTTAGTGACTCTCA..................................................................................................................................22116.001615010
.......................................................................................................................................................GGTACTTAGTGACTCTCAA.................................................................................................................................19115.001515000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------T.......................................................................................................................24115.001514010
.....................................................................................................................................................CAGGTACTTAGTGACTCTCACC--------........................................................................................................................22114.001414000
...................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGCA.................................................................................23113.001312010
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------T.......................................................................................................................24113.001310210
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAT--------........................................................................................................................22112.001212000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCACA--------........................................................................................................................22112.001212000
....................................................................................................................................................................................................GGGGTCACTCTGTGCCTGTGC..................................................................................21112.001211001
....................................................................................................................................................TCAGGTACTTAGTGACTC.....................................................................................................................................18111.00115033
......................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------........................................................................................................................21111.00118012
.....................................................................................................................................................CAGGTACTTAGTGACTCT....................................................................................................................................18110.001010000
......................................................................................................................................................AGGTACTTAGTGACTCTCAC.................................................................................................................................2019.0099000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAC--------........................................................................................................................2219.0099000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------A.......................................................................................................................2419.0097020
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACG--------........................................................................................................................2319.0097011
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------A.......................................................................................................................2418.0088000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAG.................................................................................................................................2118.0088000
...................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGT..................................................................................2217.0077000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCATA--------........................................................................................................................2317.0077000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------A.......................................................................................................................2417.0076001
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAG--------........................................................................................................................2216.0066000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCT..................................................................................................................................2016.0066000
....................................................................................................................................................TCAGGTACTTAGTGACTCTT...................................................................................................................................2015.0053011
....................................................................................................................................................TCAGGTACTTAGTGACTCAA...................................................................................................................................2015.0052030
........................................................................................................................................................GTACTTAGTGACTCTCAA.................................................................................................................................1815.0055000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCACA--------A.......................................................................................................................2315.0055000
...................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTT...................................................................................2115.0055000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------C.......................................................................................................................2415.0055000
......................................................................................................................................................AGGTACTTAGTGACTCTC...................................................................................................................................1815.0053011
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------T.......................................................................................................................2414.0042011
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------A.......................................................................................................................2414.0043010
....................................................................................................................................................TCAGGTACTTAGTGACTCTCGC.................................................................................................................................2214.0044000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCC..................................................................................................................................2114.0043001
...................................................................................................................................................CTCAGGTACTTAGTGACTCTCAAA--------........................................................................................................................2413.0033000
.....................................................................................................................................................................................................GGGTCACTCTGTGCCTGTGC..................................................................................2013.0033000
..............................................................................................................................................................................................ATTTTGGGGGTCACTCTGTGCCTGTGC..................................................................................2713.0031020
....................................................................................................................................................TCAGGTACTTAGTGACTCA....................................................................................................................................1913.0032010
...................................................................................................................................................CTCAGGTACTTAGTGACTCTC...................................................................................................................................2113.0031002
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------AA......................................................................................................................2412.0022000
droYak3
CTT-T---------GTAGTGCACGATTCG-------ATTAA---------ATCT------GTGTATAAATCAG------------TG-AAAAGTT---TT---------AAAGTC-------------------CACTCGG---TGGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TTGAC-ATTTTGGGGGTCACTCTGTGCCTGTGCTGC-----CAGTAGGACATAATCC-ACAAA------T-AAAGTG-----ATTTACATTGG-----------------AATAASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
....................................................................................................................................................TCAGGTACTTAGTGACTCTCA..................................................................................................................................21116357.00163577408256506419301221913210021
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAA.................................................................................................................................2219791.00979165358611922963127235260040
....................................................................................................................................................TCAGGTACTTAGTGACTCTC...................................................................................................................................2013549.0035496824092152789013430010
...................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGC..................................................................................2211364.001364418710661050200000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------........................................................................................................................2311292.001292192633311102133180020
.....................................................................................................................................................CAGGTACTTAGTGACTCTCA..................................................................................................................................201857.008570856100000000
....................................................................................................................................................TCAGGTACTTAGTGACTCT....................................................................................................................................191742.00742507119605193100010
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAC.................................................................................................................................221676.00676722223363121200001
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAA.................................................................................................................................211614.006140612101000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------........................................................................................................................231220.0022071079760210000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------........................................................................................................................231184.0018466169930000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------A.......................................................................................................................241156.0015617804781200010
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------........................................................................................................................231144.0014453210430000000
...................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTG...................................................................................211139.0013908243112010000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAT.................................................................................................................................221119.0011910683421220000
....................................................................................................................................................TCAGGTACTTAGTGACTCC....................................................................................................................................19192.00927202000000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCT..................................................................................................................................21189.008956171231000000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------........................................................................................................................22167.0067067000000000
......................................................................................................................................................AGGTACTTAGTGACTCTCAA.................................................................................................................................20161.00610431130400000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------........................................................................................................................23152.00529122730100000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCC..................................................................................................................................21150.00502308130600000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------AA......................................................................................................................25150.00507311010100000
......................................................................................................................................................AGGTACTTAGTGACTCTCA..................................................................................................................................19148.00480280191000000
.....................................................................................................................................................CAGGTACTTAGTGACTCTC...................................................................................................................................19136.0036034200000000
....................................................................................................................................................................................................GGGGTCACTCTGTGCCTGTGC..................................................................................21136.00362231100000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------........................................................................................................................23135.00352221100000000
....................................................................................................................................................TCAGGTACTTAGTGACTC.....................................................................................................................................18127.0027115900200000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAC.................................................................................................................................21123.0023022100000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCG..................................................................................................................................21122.0022152230000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------A.......................................................................................................................24121.0021141420000000
...................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGG..................................................................................22119.0019100180000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAG.................................................................................................................................22119.0019412110100000
...................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGCT.................................................................................23117.0017211130000000
....................................................................................................................................................TCAGGTACTTAGTGACTCG....................................................................................................................................19113.0013130000000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------T.......................................................................................................................24113.001313810000000
...................................................................................................................................................CTCAGGTACTTAGTGACTCTCA..................................................................................................................................22112.001208210010000
...................................................................................................................................................CTCAGGTACTTAGTGACTCTC...................................................................................................................................21110.001031301200000
...................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGCC.................................................................................2319.00900720000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------T.......................................................................................................................2419.00912600000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------T.......................................................................................................................2419.00902600100000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAT.................................................................................................................................2118.00808000000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------A.......................................................................................................................2418.00811600000000
..............................................................................................T---TT---------AAAGTC-------------------CACTCGG---TGGC.......................................................................................................................................................2018.00800710000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTT...................................................................................................................................2018.00810500200000
......................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------........................................................................................................................2117.00715010000000
.......................................................................................................................................................GGTACTTAGTGACTCTCA..................................................................................................................................1817.00715100000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------C.......................................................................................................................2417.00721400000000
..................................................................................................................................................................ACTCTCAAT--------GCTT-TTGAC-ATTTTGGGGGT..................................................................................................2917.00700000000007
...................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGT..................................................................................2217.00704120000000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAT--------........................................................................................................................2217.00707000000000
.....................................................................................................................................................CAGGTACTTAGTGACTCT....................................................................................................................................1817.00716000000000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAC--------........................................................................................................................2216.00606000000000
......................................................................................................................................................AGGTACTTAGTGACTCTC...................................................................................................................................1816.00614010000000
.......................................................................................................................................................GGTACTTAGTGACTCTCAA.................................................................................................................................1916.00606000000000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------A.......................................................................................................................2315.00505000000000
...................................................................................................................................................................................................GGGGGTCACTCTGTGCCT......................................................................................1815.00532000000000
...................................................................................................................................................CTCAGGTACTTAGTGACTCTCAA.................................................................................................................................2315.00503020000000
....................................................................................................................................................................................................GGGGTCACTCTGTGCCTGTG...................................................................................2015.00505000000000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------AA......................................................................................................................2415.00505000000000
....................................................................................................................................................TCAGGTACTTAGTGAC.......................................................................................................................................1615.00500000000050
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------A.......................................................................................................................2414.00403100000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------A.......................................................................................................................2414.00404000000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------T.......................................................................................................................2414.00402200000000
...................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGA..................................................................................2214.00401300000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCTT.................................................................................................................................2214.00413000000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTA...................................................................................................................................2014.00402100100000
........................................................................................................................................................GTACTTAGTGACTCTCAA.................................................................................................................................1813.00303000000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------T.......................................................................................................................2413.00301200000000
...................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGCA.................................................................................2313.00303000000000
...................................................................................................................................................................................................GGGGGTCACTCTGTGCCTG.....................................................................................1913.00300300000000
..................................................................................................TT---------AAAGTC-------------------CACTCGG---TGGC.......................................................................................................................................................1913.00300300000000
............................................................................................GTT---TT---------AAAGTC-------------------CACTCGG---TGGC.......................................................................................................................................................2213.00300210000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTTG..................................................................................................................................2112.00201000100000
......................................................................................................................................................................................................GGTCACTCTGTGCCTGTGC..................................................................................1912.00202000000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCATC--------........................................................................................................................2312.00200200000000
..................................................................................................................................................GCTCAGGTACTTAGTGACTCTCA..................................................................................................................................2312.00202000000000
droEre2
TAC-T---------GCACGGTTC-----G-------CTTAA---------ATCT------GTGTACAAGTCAG------------TG-AATAGTT---TA---------AGTGTC-------------------CACTCGG---TGGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TTGAC-ATTTTGGGGGTCACTCTGTGCCTGTGCTGC-----CAGTGGGACGCAATCA-ACAAA-----AT-AAAGTG-----ATAAGTACA------------------AGTGAASizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAA.................................................................................................................................22155099.00550995214644332546419715204
....................................................................................................................................................TCAGGTACTTAGTGACTCTCA..................................................................................................................................21151360.00513604785855216699521815647
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAA.................................................................................................................................2114679.0046794675100120
.....................................................................................................................................................CAGGTACTTAGTGACTCTCA..................................................................................................................................2014162.0041624158010030
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------........................................................................................................................2313789.0037893462362641241973
....................................................................................................................................................TCAGGTACTTAGTGACTCTC...................................................................................................................................2012705.0027052124888041603120
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAC.................................................................................................................................2211216.0012161116346247290
....................................................................................................................................................TCAGGTACTTAGTGACTCT....................................................................................................................................191493.0049340952228470
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------A.......................................................................................................................241469.004694336241167
...................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGC..................................................................................221423.00423199952302887
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------........................................................................................................................231392.003923626213108
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAT.................................................................................................................................221374.00374360313340
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------........................................................................................................................221343.00343343000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------........................................................................................................................231265.0026519931179180
......................................................................................................................................................AGGTACTTAGTGACTCTCAA.................................................................................................................................201229.00229215054050
....................................................................................................................................................TCAGGTACTTAGTGACTCTCG..................................................................................................................................211193.00193189002110
......................................................................................................................................................AGGTACTTAGTGACTCTCA..................................................................................................................................191188.00188176117030
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------........................................................................................................................231170.001701501003151
.....................................................................................................................................................CAGGTACTTAGTGACTCTC...................................................................................................................................191167.00167167000000
...................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTG...................................................................................211144.001441234052100
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAC.................................................................................................................................211109.00109109000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------........................................................................................................................231104.0010493713000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------AA......................................................................................................................25195.009590012020
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------........................................................................................................................23193.009389021010
...................................................................................................................................................CTCAGGTACTTAGTGACTCTCA..................................................................................................................................22174.0074610020110
...................................................................................................................................................CTCAGGTACTTAGTGACTCTCAA.................................................................................................................................23158.005854010030
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------T.......................................................................................................................24157.005754000210
....................................................................................................................................................TCAGGTACTTAGTGACTCTCT..................................................................................................................................21155.0055350512120
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAG.................................................................................................................................22144.004444000000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAT--------........................................................................................................................22138.003838000000
...................................................................................................................................................CTCAGGTACTTAGTGACTCTC...................................................................................................................................21136.003660510240
.....................................................................................................................................................CAGGTACTTAGTGACTCT....................................................................................................................................18134.003434000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------A.......................................................................................................................24133.003329301000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAT.................................................................................................................................21133.003333000000
.......................................................................................................................................................GGTACTTAGTGACTCTCA..................................................................................................................................18128.002828000000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------A.......................................................................................................................23127.002727000000
.......................................................................................................................................................GGTACTTAGTGACTCTCAA.................................................................................................................................19124.002424000000
....................................................................................................................................................................................................GGGGTCACTCTGTGCCTGTGC..................................................................................21120.002020000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------A.......................................................................................................................24118.001818000000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAC--------........................................................................................................................22117.001717000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCC..................................................................................................................................21117.00171059011
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAG.................................................................................................................................21116.001616000000
......................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------........................................................................................................................21115.001513002000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------T.......................................................................................................................24114.001413100000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------C.......................................................................................................................24114.001414000000
....................................................................................................................................................................................................GGGGTCACTCTGTGCCTGTG...................................................................................20113.001313000000
......................................................................................................................................................AGGTACTTAGTGACTCTC...................................................................................................................................18113.001311010100
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------A.......................................................................................................................24112.001210200000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCACC--------........................................................................................................................22111.001111000000
...................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGCA.................................................................................2318.0088000000
....................................................................................................................................................TCAGGTACTTAGTGACTC.....................................................................................................................................1817.0074100020
....................................................................................................................................................................................................GGGGTCACTCTGTGCCTGTGCT.................................................................................2217.0076100000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCACA--------........................................................................................................................2217.0077000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTA...................................................................................................................................2016.0063000030
....................................................................................................................................................TCAGGTACTTAGTGACTCTT...................................................................................................................................2016.0065000010
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------AA......................................................................................................................2416.0066000000
...................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGT..................................................................................2216.0066000000
......................................................................................................................................................AGGTACTTAGTGACTCTCAC.................................................................................................................................2016.0066000000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------T.......................................................................................................................2416.0064110000
....................................................................................................................................................TCAGGTACTTAGTGACTCTCGC.................................................................................................................................2215.0055000000
...................................................................................................................................................................................................GGGGGTCACTCTGTGCCTG.....................................................................................1914.0044000000
...................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGCT.................................................................................2314.0041102000
.....................................................................................................................................................CAGGTACTTAGTGACTCTCAAG--------........................................................................................................................2214.0044000000

Generated: 10/20/2015 at 06:46 PM