ID:

dpe-mir-282

 Coordinate:

scaffold_65:103950-104040 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-36.3 -36.2

Flybase annnotation

pre_miRNA [Dper\mir-282-RM]; miRNA [Dper\miR-282-RA]

No Repeatable elements found

Sense Strand Reads

TCTGATAAGTGGGCGTGGCCGGTATAAGTGTGTTTGTTCTAAAGCGAATGTGCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCATTTGAAAACCCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGAAGAAATGCATCAAAAGCGGAATCCCGATTACAGTTACACTTACGCGAACGC

************************************************....((((....(((((((((((..((((((.((((((..................)))))).))))))..))))))))))).....)))).....*********************************************** 		Read size # Mismatch Hit Count Total Norm Total M042

female body

 V050

head

 V042

embryo

 V057

head

 V111

male body		 M021

embryo
...............................................................TAGCCTCTACTAGGCTTTGTCT.......................................................................................................... 22 0 1 10137.00 10137 4679 3494 930 781 226 27
...............................................................TAGCCTCTACTAGGCTTTGTCA.......................................................................................................... 22 1 1 1349.00 1349 436 10 895 7 1 0
...........................................................................................................ACATAGCCTATAAGAGGTTAGG.............................................................. 22 0 1 1062.00 1062 601 184 53 185 39 0
...............................................................TAGCCTCTACTAGGCTTTGTC........................................................................................................... 21 0 1 519.00 519 263 146 14 80 14 2
................................................................AGCCTCTACTAGGCTTTGTCT.......................................................................................................... 21 0 1 405.00 405 397 5 2 1 0 0
...........................................................................................................ACATAGCCTATAAGAGGTTAG............................................................... 21 0 1 180.00 180 33 50 2 75 20 0
...............................................................TAGCCTCTGCTAGGCTTTGTCT.......................................................................................................... 22 1 1 165.00 165 159 1 3 2 0 0
...............................................................TAGCCTCTACTAGGCTTTGTCTG......................................................................................................... 23 0 1 141.00 141 111 17 0 11 2 0
...............................................................TAGCCTCTACTAGGCTTTGTCTT......................................................................................................... 23 1 1 140.00 140 125 10 2 2 1 0
...............................................................TAGCCTCTACTAGGCTTTGTCAA......................................................................................................... 23 2 1 98.00 98 97 0 1 0 0 0
................................................................AGCCTCTACTAGGCTTTGTCTG......................................................................................................... 22 0 1 96.00 96 95 0 0 1 0 0
...............................................................TAGCCTCTACTAGGCTTTGT............................................................................................................ 20 0 1 79.00 79 29 29 4 6 11 0
...............................................................TAGCCTCTACTAGGCTTTGTCTA......................................................................................................... 23 1 1 67.00 67 59 3 4 1 0 0
............................................................................................................CATAGCCTATAAGAGGTTAGG.............................................................. 21 0 1 56.00 56 56 0 0 0 0 0
...........................................................................................................ACATAGCCTATAAGAGGTTAGGT............................................................. 23 0 1 44.00 44 15 12 0 15 2 0
...............................................................TAGCCTCTTCTAGGCTTTGTCT.......................................................................................................... 22 1 1 43.00 43 40 0 1 2 0 0
...............................................................TAGCCTCTCCTAGGCTTTGTCT.......................................................................................................... 22 1 1 40.00 40 35 3 1 1 0 0
.................................................................GCCTCTACTAGGCTTTGTCT.......................................................................................................... 20 0 1 39.00 39 34 2 3 0 0 0
...........................................................................................................ACATAGCCTATAAGAGGTTAGT.............................................................. 22 1 1 39.00 39 3 5 0 15 16 0
................................................................AGCCTCTACTAGGCTTTGTCA.......................................................................................................... 21 1 1 34.00 34 34 0 0 0 0 0
...................................................................CTCTACTAGGCTTTGTCT.......................................................................................................... 18 0 1 33.00 33 10 1 2 1 2 17
...........................................................................................................ACATAGCCGATAAGAGGTTAGG.............................................................. 22 1 1 29.00 29 29 0 0 0 0 0
...............................................................TAGCCTCTACTAGGCTTTGTCG.......................................................................................................... 22 1 1 26.00 26 19 3 3 0 0 1
..........................................................................................................GACATAGCCTATAAGAGGTTAGG.............................................................. 23 0 1 25.00 25 14 3 2 5 1 0
................................................................AGCCTCTAGTAGGCTTTGTCT.......................................................................................................... 21 1 1 25.00 25 25 0 0 0 0 0
...............................................................TAGCCTCTACTAGGCTTTGTCC.......................................................................................................... 22 1 1 25.00 25 9 4 8 1 0 3
...............................................................TAGCATCTACTAGGCTTTGTCT.......................................................................................................... 22 1 1 21.00 21 1 6 6 8 0 0
...............................................................TAGCCTCTACTCGGCTTTGTCT.......................................................................................................... 22 1 1 20.00 20 0 8 10 2 0 0
...............................................................TAGCCTCTACTAGGCTTTGTCTAA........................................................................................................ 24 2 1 19.00 19 19 0 0 0 0 0
...............................................................GAGCCTCTACTAGGCTTTGTCT.......................................................................................................... 22 1 1 18.00 18 17 0 0 1 0 0
................................................................AGCCTCTACTAGGCTTTGTC........................................................................................................... 20 0 1 18.00 18 18 0 0 0 0 0
..........................................................................................................GACATAGCCTATAAGAGGTTAG............................................................... 22 0 1 18.00 18 3 9 0 5 1 0
...............................................................TAGCCTCTACTATGCTTTGTCT.......................................................................................................... 22 1 1 17.00 17 0 11 2 4 0 0
...........................................................................................................ACATAGCCTATAAGAGGTT................................................................. 19 0 1 16.00 16 1 4 1 8 2 0
...............................................................TAGCCTCTACTAGGCTTTTTCT.......................................................................................................... 22 1 1 16.00 16 5 5 1 5 0 0
...............................................................TAGCCTCTACTAGGCTTTGCCT.......................................................................................................... 22 1 1 16.00 16 2 9 2 1 1 1
...............................................................TAGCCGCTACTAGGCTTTGTCT.......................................................................................................... 22 1 1 15.00 15 1 11 0 3 0 0
..............................................................CTAGCCTCTACTAGGCTTTGTCT.......................................................................................................... 23 0 1 15.00 15 11 1 3 0 0 0
...............................................................TAGCCTCTGCTAGGCTTTGTCA.......................................................................................................... 22 2 1 15.00 15 14 0 1 0 0 0
...............................................................TAGCCTCTACTCGGCTTTGTCA.......................................................................................................... 22 2 1 13.00 13 0 0 13 0 0 0
...............................................................TAGCCTCTACTAGGCTTTGTAT.......................................................................................................... 22 1 1 13.00 13 0 8 2 3 0 0
...............................................................TAGCCTCTACTAGGATTTGTCT.......................................................................................................... 22 1 1 12.00 12 0 5 3 4 0 0
...........................................................................................................ACATAGCCAATAAGAGGTTAGG.............................................................. 22 1 1 12.00 12 12 0 0 0 0 0
...............................................................TAGCCTCTACTAGGCTTTGTCTTT........................................................................................................ 24 1 1 12.00 12 11 1 0 0 0 0
...............................................................TAGCCTCTACTAGGCCTTGTCT.......................................................................................................... 22 1 1 12.00 12 2 7 1 2 0 0
...............................................................TAGCCTCTACTAGGCTTTGTAA.......................................................................................................... 22 2 1 10.00 10 6 0 3 0 1 0
................................................................AGCCTCTACTAGGCTTTGTCTGT........................................................................................................ 23 0 1 10.00 10 8 0 0 2 0 0
...............................................................TAGCCTCTACTAGGCTTCGTCT.......................................................................................................... 22 1 1 10.00 10 0 5 2 3 0 0
...........................................................................................................ACATAGCCTATAAGAGGTTA................................................................ 20 0 1 10.00 10 2 5 0 3 0 0
...............................................................TAGCCTCTACTAGGCTTTATCT.......................................................................................................... 22 1 1 10.00 10 0 7 3 0 0 0
...............................................................TATCCTCTACTAGGCTTTGTCT.......................................................................................................... 22 1 1 10.00 10 6 4 0 0 0 0
...............................................................TAGCCACTACTAGGCTTTGTCT.......................................................................................................... 22 1 1 10.00 10 1 9 0 0 0 0
.....................................................................................GTGCATTTGAAAACCCGATCAG.................................................................................... 22 0 1 10.00 10 6 0 0 1 3 0
...............................................................TAGCCTCTACTGGGCTTTGTCT.......................................................................................................... 22 1 1 10.00 10 2 4 1 3 0 0
..................................................................CCTCTACTAGGCTTTGTCT.......................................................................................................... 19 0 1 10.00 10 7 1 0 0 2 0
...............................................................TAGCCTCTAATAGGCTTTGTCT.......................................................................................................... 22 1 1 9.00 9 0 5 3 1 0 0
...............................................................TGGCCTCTACTAGGCTTTGTCT.......................................................................................................... 22 1 1 9.00 9 3 5 0 0 0 1
................................................................AGCCTCTACTAGGCTTTGTCAA......................................................................................................... 22 2 1 9.00 9 9 0 0 0 0 0
...............................................................TAGCCTCTACGAGGCTTTGTCT.......................................................................................................... 22 1 1 9.00 9 0 3 0 6 0 0
................................................................AGCCTCTAATAGGCTTTGTCT.......................................................................................................... 21 1 1 8.00 8 8 0 0 0 0 0
...............................................................TAGCTTCTACTAGGCTTTGTCT.......................................................................................................... 22 1 1 8.00 8 1 3 1 2 1 0
...............................................................TAGCCTCTACTTGGCTTTGTCT.......................................................................................................... 22 1 1 8.00 8 2 5 0 1 0 0
...............................................................TAGCCTCTACTAGGCTTTGTCTAAA....................................................................................................... 25 3 1 8.00 8 8 0 0 0 0 0
...............................................................TAGCCTCTGCTAGGCTTTGTC........................................................................................................... 21 1 1 8.00 8 8 0 0 0 0 0
...............................................................TAGCCTCTGCTAGGCTTTGTCTT......................................................................................................... 23 2 1 8.00 8 8 0 0 0 0 0
...............................................................TAGCCTCTACTAGGCTTTGGCT.......................................................................................................... 22 1 1 8.00 8 2 3 2 1 0 0
................................................................AGCCTCTACTAGGCTTTGTCTT......................................................................................................... 22 1 1 8.00 8 8 0 0 0 0 0
.................................................................GCCTCTACTAGGCTTTGTCTG......................................................................................................... 21 0 1 8.00 8 8 0 0 0 0 0
...............................................................TAGCCCCTACTAGGCTTTGTCT.......................................................................................................... 22 1 1 8.00 8 1 5 1 1 0 0
..............................................................GTAGCCTCTACTAGGCTTTGTCT.......................................................................................................... 23 1 1 7.00 7 7 0 0 0 0 0
...............................................................TAGCCTCTACTAGGCTTTGTTA.......................................................................................................... 22 2 1 7.00 7 0 0 7 0 0 0
...............................................................TAGACTCTACTAGGCTTTGTCT.......................................................................................................... 22 1 1 7.00 7 1 2 3 1 0 0
...............................................................TAGCCTATACTAGGCTTTGTCT.......................................................................................................... 22 1 1 7.00 7 1 2 2 2 0 0
................................................................AGCCTCTACTAGGCTTTGTCTA......................................................................................................... 22 1 1 7.00 7 7 0 0 0 0 0
...............................................................TAGCCTCTACTAGGCTCTGTCT.......................................................................................................... 22 1 1 7.00 7 1 3 0 3 0 0
...........................................................................................................ACATAGCCTATAAGAGGTTAGGA............................................................. 23 1 1 7.00 7 5 1 0 1 0 0
...............................................................TAGCCTCTACTAGCCTTTGTCT.......................................................................................................... 22 1 1 7.00 7 3 3 0 1 0 0
...............................................................TAGCCTCTTCTAGGCTTTGTCA.......................................................................................................... 22 2 1 7.00 7 3 0 4 0 0 0
...............................................................CAGCCTCTACTAGGCTTTGTCT.......................................................................................................... 22 1 1 7.00 7 3 2 1 1 0 0
...............................................................TAGCCTCTACTAGTCTTTGTCT.......................................................................................................... 22 1 1 6.00 6 2 1 1 2 0 0
...............................................................TAGCCTCTGCTAGGCTTTGTCTA......................................................................................................... 23 2 1 6.00 6 5 0 1 0 0 0
...........................................................................................................ACATAGCCTATAAGAGGGTAGG.............................................................. 22 1 1 6.00 6 0 0 0 6 0 0
...........................................................................................................ACATAGCCTATAAGCGGTTAGG.............................................................. 22 1 1 6.00 6 0 2 0 4 0 0
...............................................................TAGCCTCTACTAGGCTTTGTCTGT........................................................................................................ 24 0 1 6.00 6 1 3 0 2 0 0
...............................................................AAGCCTCTACTAGGCTTTGTCT.......................................................................................................... 22 1 1 6.00 6 3 3 0 0 0 0
...............................................................TAGCCTCTACTAGGCTTTGTCTC......................................................................................................... 23 1 1 5.00 5 4 0 0 1 0 0
...............................................................TAGCCTCTACTACGCTTTGTCT.......................................................................................................... 22 1 1 5.00 5 1 3 1 0 0 0
..............................................................CTAGCCTCTACTAGGCTTTGTCA.......................................................................................................... 23 1 1 5.00 5 1 0 4 0 0 0
...........................................................................................................ACATAGCCTATAAGAGGTTATG.............................................................. 22 1 1 5.00 5 1 1 1 2 0 0
...............................................................TAGCCTCTACTAGGCTTTCTCT.......................................................................................................... 22 1 1 5.00 5 2 2 0 0 1 0
............................................................................................................CATAGCCTATAAGAGGTTAG............................................................... 20 0 1 5.00 5 5 0 0 0 0 0
..............................................................TTAGCCTCTACTAGGCTTTGTCT.......................................................................................................... 23 1 1 5.00 5 5 0 0 0 0 0
...............................................................TAACCTCTACTAGGCTTTGTCT.......................................................................................................... 22 1 1 5.00 5 0 5 0 0 0 0
...............................................................TAGCCTCGACTAGGCTTTGTCT.......................................................................................................... 22 1 1 5.00 5 1 1 1 2 0 0
...............................................................TAGCCTCTGCTAGGCTTTGTCAA......................................................................................................... 23 3 1 5.00 5 5 0 0 0 0 0
...............................................................TACCCTCTACTAGGCTTTGTCT.......................................................................................................... 22 1 1 5.00 5 3 2 0 0 0 0
............................................................................................................CATAGCCTGTAAGAGGTTAGG.............................................................. 21 1 1 4.00 4 4 0 0 0 0 0
...............................................................TAGTCTCTACTAGGCTTTGTCT.......................................................................................................... 22 1 1 4.00 4 2 1 1 0 0 0
...............................................................TAGCCTCTACCAGGCTTTGTCT.......................................................................................................... 22 1 1 4.00 4 0 2 1 1 0 0
...............................................................TAGCCTCTACTAAGCTTTGTCT.......................................................................................................... 22 1 1 4.00 4 0 2 2 0 0 0
...............................................................TAGCCTCTACTAGGCTTTGTTT.......................................................................................................... 22 1 1 4.00 4 1 3 0 0 0 0
...........................................................................................................ACATAGCCTATAAGAGGTTAGGTT............................................................ 24 1 1 4.00 4 3 0 0 1 0 0
...............................................................TAGCCTCTACTGGGCTTTGTCA.......................................................................................................... 22 2 1 4.00 4 0 1 3 0 0 0
...............................................................TAGCCTCTACTAGACTTTGTCT.......................................................................................................... 22 1 1 4.00 4 3 1 0 0 0 0
...........................................................................................................ACATAGCCTATAAGAGGTTAGC.............................................................. 22 1 1 4.00 4 1 2 0 1 0 0
...............................................................TAGCCTCTACTAGGCTTTCTC........................................................................................................... 21 1 1 4.00 4 1 1 0 2 0 0
...............................................................TAGCCTCTACTAGGCTGTGTCT.......................................................................................................... 22 1 1 4.00 4 0 2 1 1 0 0
...............................................................TAGCCTCTACTAGCCTTTGTC........................................................................................................... 21 1 1 4.00 4 1 1 0 2 0 0
...............................................................TAGCCTCTACTAGGCTTTGTGT.......................................................................................................... 22 1 1 4.00 4 0 4 0 0 0 0
...............................................................TAGCCTCTACTAGGCTTTG............................................................................................................. 19 0 1 3.00 3 3 0 0 0 0 0
...............................................................TAGCCTCTACTAGGCGTTGTCT.......................................................................................................... 22 1 1 3.00 3 0 1 0 2 0 0
...............................................................TAGCCTCTACTAGGTTTTGTCT.......................................................................................................... 22 1 1 3.00 3 1 1 0 0 1 0
...................................................................CTCTACTAGGCTTTGTCA.......................................................................................................... 18 1 1 3.00 3 1 0 2 0 0 0
...........................................................................................................ACATAGCCCATAAGAGGTTAGG.............................................................. 22 1 1 3.00 3 3 0 0 0 0 0
...............................................................TAGCCTCTCCTAGGCTTTGTCA.......................................................................................................... 22 2 1 3.00 3 3 0 0 0 0 0
...............................................................TAGCCTCTACTAGGCTTTGTCAT......................................................................................................... 23 2 1 3.00 3 2 0 1 0 0 0
...........................................................................................................ACATAGCCTATAAGAGGTTACG.............................................................. 22 1 1 3.00 3 0 2 0 1 0 0
...............................................................TAGCCTCTACAAGGCTTTGTCT.......................................................................................................... 22 1 1 3.00 3 1 1 0 1 0 0
...............................................................TAGCATCTACTGGGCTTTGTCT.......................................................................................................... 22 2 1 3.00 3 0 2 0 1 0 0
...............................................................TAGCATCTACTAGGCTTTGTCA.......................................................................................................... 22 2 1 3.00 3 0 0 3 0 0 0
..........................................................................................................CACATAGCCTATAAGAGGTTAGG.............................................................. 23 1 1 3.00 3 2 1 0 0 0 0
...............................................................TAGGCTCTACTAGGCTTTGTCT.......................................................................................................... 22 1 1 3.00 3 0 2 0 1 0 0
...............................................................TAGCCTCCACTAGGCTTTGTCT.......................................................................................................... 22 1 1 3.00 3 1 2 0 0 0 0
...............................................................GAGCCTCTACTAGGCTTTGTCA.......................................................................................................... 22 2 1 3.00 3 3 0 0 0 0 0
................................................................AGCCTCTAATAGGCTTTGTC........................................................................................................... 20 1 1 3.00 3 3 0 0 0 0 0
..............................................................ATAGCCTCTACTAGGCTTTGTCT.......................................................................................................... 23 1 1 3.00 3 3 0 0 0 0 0
...............................................................TAGCCTCTACTAGGATTTGTCA.......................................................................................................... 22 2 1 3.00 3 0 0 3 0 0 0
................................................................AGCCTCTAGTAGGCTTTGTCTG......................................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0
...............................................................TAGCCTCTACTAGGCTTTGTA........................................................................................................... 21 1 1 3.00 3 0 1 0 2 0 0
...........................................................................................................ACATAGCCTATATGAGGTTAGG.............................................................. 22 1 1 3.00 3 0 0 0 3 0 0
...............................................................TAGCAGCTACTAGGCTTTGTCT.......................................................................................................... 22 2 1 3.00 3 0 2 0 1 0 0
...............................................................TAGCCTCTACTAGGCTTGGTCT.......................................................................................................... 22 1 1 3.00 3 0 0 0 3 0 0
...............................................................TAGCCTCTACTAGGCTTTTTC........................................................................................................... 21 1 1 3.00 3 0 0 0 3 0 0
...........................................................................................................AAATAGCCTATAAGAGGTTAG............................................................... 21 1 1 3.00 3 0 1 0 2 0 0
...........................................................................................................ACATAGCCTATAAGTGGTTAGG.............................................................. 22 1 1 3.00 3 0 1 0 2 0 0
...............................................................TAGCCGCTACTAGGCTTTGTC........................................................................................................... 21 1 1 3.00 3 1 2 0 0 0 0
...............................................................TAGCATATACTAGGCTTTGTCT.......................................................................................................... 22 2 1 3.00 3 0 1 1 1 0 0
................................................................AGCCTCTACTAGGCTTTGTCTGA........................................................................................................ 23 1 1 3.00 3 3 0 0 0 0 0
...............................................................TAGCCTCTCCTAGCCTTTGTCT.......................................................................................................... 22 2 1 3.00 3 0 3 0 0 0 0
...............................................................TAGCCTCTACTCGGCTTTGCCT.......................................................................................................... 22 2 1 3.00 3 0 1 1 1 0 0
...............................................................TAGCCTCTAGTAGGCTTTGTCT.......................................................................................................... 22 1 1 2.00 2 0 0 0 2 0 0
...............................................................AAGCCACTACTAGGCTTTGTCT.......................................................................................................... 22 2 1 2.00 2 0 1 0 1 0 0
...............................................................TAGCCTCTCCTAGGCTTTGTC........................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0
...........................................................................................................ACATAGCCTATAAGAGGTTCGG.............................................................. 22 1 1 2.00 2 0 2 0 0 0 0
...........................................................................................................ACATAGCCTATAAGAGGTTAGAT............................................................. 23 1 1 2.00 2 2 0 0 0 0 0
...............................................................TAGCCGCTACTATGCTTTGTCT.......................................................................................................... 22 2 1 2.00 2 0 0 0 2 0 0
...............................................................TAGCCTCTACTAGGCTTTGTCGA......................................................................................................... 23 2 1 2.00 2 2 0 0 0 0 0
................................................................AGCCTCTATTAGGCTTTGTCTT......................................................................................................... 22 2 1 2.00 2 2 0 0 0 0 0
................................................................AGCCTCTACTAGGCTTTGT............................................................................................................ 19 0 1 2.00 2 2 0 0 0 0 0
...............................................................TAGCCGCTACTAGGCTTTGT............................................................................................................ 20 1 1 2.00 2 0 0 2 0 0 0
................................................................AGCCTCTATTAGGCTTTGTCT.......................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0
...............................................................TAGAATCTACTAGGATTTGTCT.......................................................................................................... 22 3 1 2.00 2 0 0 1 1 0 0
...................................................................CTCTACTAGGCTTTGTCC.......................................................................................................... 18 1 1 2.00 2 0 0 0 0 0 2
...............................................................TAGCCTCTACTAGGCTTAGTCT.......................................................................................................... 22 1 1 2.00 2 1 1 0 0 0 0
...............................................................TAGCCTCTACTTTGCTTTGTCT.......................................................................................................... 22 2 1 2.00 2 0 1 0 1 0 0
...............................................................TAGCCTCTACTGGGCTTTGTC........................................................................................................... 21 1 1 2.00 2 0 0 0 2 0 0
...........................................................................................................ACATAGCCTATCAGAGGTTAGG.............................................................. 22 1 1 2.00 2 0 1 1 0 0 0
...............................................................TAGCCGCTACTAGGCTTTGGCT.......................................................................................................... 22 2 1 2.00 2 0 1 0 1 0 0
...............................................................TAGCCTCTGCTAGGCTTTGTCTG......................................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0
...............................................................TAGCCTCTACACGGCTTTGTCT.......................................................................................................... 22 2 1 2.00 2 0 0 1 1 0 0
...............................................................TAGCCGCTACTAGGCTTTGTCA.......................................................................................................... 22 2 1 2.00 2 0 0 2 0 0 0
...............................................................TAGCCTCTACTAGGCTTTGTT........................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0
...............................................................TAGCCTCTACTAGGCTTGGTCA.......................................................................................................... 22 2 1 2.00 2 0 0 2 0 0 0
...............................................................TAGCCTCTACTACGCTTTGTCA.......................................................................................................... 22 2 1 2.00 2 0 0 2 0 0 0
...............................................................TAGCCTCTGCTAGGCTTTGTCC.......................................................................................................... 22 2 1 2.00 2 1 0 1 0 0 0
...............................................................TAGCCTCTTCTAGGCTTTGTCTG......................................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0
...........................................................................................................GCATAGCCTATAAGAGGTTAGG.............................................................. 22 1 1 2.00 2 1 1 0 0 0 0
...............................................................TAGCCTCTACTAGGCATTGTCT.......................................................................................................... 22 1 1 2.00 2 0 1 0 1 0 0
...............................................................TAGCCTCTACTAGGCTTTCTCA.......................................................................................................... 22 2 1 2.00 2 0 0 2 0 0 0
..............................................................TTAGCCTCTACTAGGCTTTGTC........................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0
...............................................................TAGCCTCTTCTAGGCTTTGTCTA......................................................................................................... 23 2 1 2.00 2 2 0 0 0 0 0
...............................................................TAGCATCGACTGGGCTTTGTCT.......................................................................................................... 22 3 1 2.00 2 0 1 0 1 0 0
...............................................................TAGCCTCTAATAGGCTTTGTAT.......................................................................................................... 22 2 1 2.00 2 0 2 0 0 0 0
...............................................................TAGCCTCTACTAGGCTCTGTCA.......................................................................................................... 22 2 1 2.00 2 0 0 2 0 0 0
...........................................................................................................ACATAGCCTATAAGAGGTTGGG.............................................................. 22 1 1 2.00 2 0 1 1 0 0 0
...............................................................TAGCCGCTACTAGCCTTTGTCT.......................................................................................................... 22 2 1 2.00 2 0 1 0 1 0 0
...............................................................TAGCCTCTACTAGGCTTTGCC........................................................................................................... 21 1 1 2.00 2 1 0 0 1 0 0
...............................................................CAGCCTCTACTAGGCTTTTTCT.......................................................................................................... 22 2 1 2.00 2 0 1 0 1 0 0
................................................................AGCCTCTACTAGGCTTTGTCTAA........................................................................................................ 23 2 1 2.00 2 2 0 0 0 0 0
.................................................................GCCTCTACTAGGCTTTGT............................................................................................................ 18 0 1 2.00 2 2 0 0 0 0 0
......................................................................................TGCATTTGAAAACCCGATCAG.................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0
...............................................................TAGACTCTACTAGGCTTTCTCT.......................................................................................................... 22 2 1 2.00 2 0 1 0 1 0 0
...............................................................TAGCCCCTACTAGGCTTTGTCA.......................................................................................................... 22 2 1 2.00 2 0 0 2 0 0 0
...........................................................................................................ACATAGCCTATAAGAGGCTAGG.............................................................. 22 1 1 2.00 2 0 1 1 0 0 0
...........................................................................................................ACATAGCCTATAAAAGGTTAGG.............................................................. 22 1 1 2.00 2 1 0 0 1 0 0
...............................................................TAGCCTCTACTAGGCTTTGTCAAA........................................................................................................ 24 3 1 2.00 2 2 0 0 0 0 0
...............................................................TTGCCTCTACTAGGCTTTGTCT.......................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0
...............................................................TAGCCTCTACTAGGGTTTGTCA.......................................................................................................... 22 2 1 2.00 2 0 0 2 0 0 0
...........................................................................................................ACATAGCCTATAAGAGGTTAGA.............................................................. 22 1 1 2.00 2 1 0 1 0 0 0
...............................................................TAGCCTCTACTAGGCTTTTTTT.......................................................................................................... 22 2 1 2.00 2 1 0 0 1 0 0
...........................................................................................................ACATAGCTTATAAGAGGTTAGG.............................................................. 22 1 1 2.00 2 0 0 0 1 1 0
...............................................................TAGCCTATACTAGGCTTTGTCA.......................................................................................................... 22 2 1 2.00 2 0 0 2 0 0 0
...........................................................................................................ACATAGCCTATGAGAGGTTAGG.............................................................. 22 1 1 2.00 2 0 0 0 1 1 0
...............................................................TAGCCTCTACTAGGCTTTGACT.......................................................................................................... 22 1 1 2.00 2 0 2 0 0 0 0
...............................................................TAGCCTCTACTACGCTTTGTC........................................................................................................... 21 1 1 2.00 2 0 1 0 1 0 0
...............................................................TAGCCTCTACTAGGCTTTGTCTGTA....................................................................................................... 25 1 1 2.00 2 2 0 0 0 0 0
................................................................AGCCTCTATTAGGCTTTGTCTG......................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0
...............................................................CAGCCTCTACTGGGCTTTGTCT.......................................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0
...............................................................TAGCCTCTACTAGGCTTTATC........................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
...........................................................................................................ACATAGCCTAGAAGAGGTTAGG.............................................................. 22 1 1 1.00 1 0 0 0 1 0 0
...........................................................................................................ACATAGCCTATAAGAGAGTAG............................................................... 21 2 1 1.00 1 0 0 0 1 0 0
...........................................................................................................ACATAGACTATAAGAGGTTAGC.............................................................. 22 2 1 1.00 1 0 0 0 1 0 0
...............................................................TAGCCTCTACTAGGCTTTGTCTTTT....................................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0
...............................................................TAGCCTCTACTAGGCTTTGTGA.......................................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
...............................................................TAGCCTCTACTAGGCTTTGTCTGAAA...................................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0
...............................................................TAGCGTCTTCTAGGCTGTGTCT.......................................................................................................... 22 3 1 1.00 1 0 0 0 1 0 0
................................................................AGCCTCTAGTAGGCTTTGTC........................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
...............................................................TAGCCTCTACTTTGCTTTATCT.......................................................................................................... 22 3 1 1.00 1 0 0 0 1 0 0
..........................................................................................................GACATAGCCTATAAGAGGTTAC............................................................... 22 1 1 1.00 1 0 0 0 1 0 0
...............................................................TAGACTATACTGGGCTTTGTCT.......................................................................................................... 22 3 1 1.00 1 0 0 1 0 0 0
...............................................................TAGCCTCTACTGGGCCTTGTCT.......................................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
...............................................................GAGCCTCTACTAGGCTTTGTC........................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
...............................................................TAGCCTTTACTAGGCTTTGTCA.......................................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
...............................................................TATCCTCTACTAGGCTTTG............................................................................................................. 19 1 1 1.00 1 0 0 0 1 0 0
...............................................................TAGCCTTTTCTAGTCTTTGTCT.......................................................................................................... 22 3 1 1.00 1 0 1 0 0 0 0
...........................................................................................................ACATAGCCTATAACCGGTTAGT.............................................................. 22 3 1 1.00 1 0 0 0 1 0 0
...............................................................TAGCCTCTACTAGCCTTTGTCG.......................................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
...........................................................................................................ACATAGCCTATATGAGGTTCTG.............................................................. 22 3 1 1.00 1 0 1 0 0 0 0
...........................................................................................................ACATAGCCTATAAGAGGCTGGG.............................................................. 22 2 1 1.00 1 0 0 0 1 0 0
...............................................................TAGGCTCTACTAGCCTTTGTCT.......................................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0
...............................................................TAGCCTCTACTAGGCTTTGTCTTGGCTT.................................................................................................... 28 3 1 1.00 1 1 0 0 0 0 0
...............................................................TAGCATCGACTAGGCGTTGTCT.......................................................................................................... 22 3 1 1.00 1 0 0 0 1 0 0
...............................................................TAACCTCGACTAGGCTTTGT............................................................................................................ 20 2 1 1.00 1 0 1 0 0 0 0
...............................................................TAGCCTCTTCTAGGCTTTCTCT.......................................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0
...............................................................TAGCCTCTACTAGGCTTCGTC........................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
...............................................................TAGCCTCTACTAGGCTTTGTCTTGGTA..................................................................................................... 27 3 1 1.00 1 1 0 0 0 0 0
...............................................................TAGCCTCTACTAGGCTTTGTCTGG........................................................................................................ 24 1 1 1.00 1 1 0 0 0 0 0
...............................................................AAGCCTCTACTAGGCTTTGCCC.......................................................................................................... 22 3 1 1.00 1 0 0 1 0 0 0
................................................................AGCCTCTACTAGTCTTTGTCT.......................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................................ACATAGCCTATAAGAGGTTTG............................................................... 21 1 1 1.00 1 0 0 0 1 0 0
....................................................................TCTACTAGGCTTTGTCTG......................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0
...............................................................TAGTATCTACTAGGCTTTGTCT.......................................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0
................................................................AGCCTCTAATAGGCTTTGTCTGT........................................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
................................................................AGCCTCTACTAGGGTTTGTCT.......................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
...............................................................TAGCCTCTACGAGGCTTTGTC........................................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0
...........................................................................................................ACAGAGCCTATAAGAGGTTAGG.............................................................. 22 1 1 1.00 1 0 0 0 1 0 0
...............................................................TAGCCTCTACCAGGCACTGTCT.......................................................................................................... 22 3 1 1.00 1 0 0 0 1 0 0
...............................................................TTGCCCCTACTAGGCCTTGTCT.......................................................................................................... 22 3 1 1.00 1 0 0 0 1 0 0
...........................................................................................................ACATAGCCTACAAGAGGTTAGG.............................................................. 22 1 1 1.00 1 0 0 0 1 0 0
................................................................AGCCTCTGCTAGGCTTTGTCAA......................................................................................................... 22 3 1 1.00 1 1 0 0 0 0 0
...............................................................TAGCCTCTACTTGGCTTTGGCT.......................................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
...............................................................TAGCCTGTATTAGGCTTTGTCT.......................................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0
...............................................................TAGCCGCTACTTGGCTTTGTCT.......................................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0
...............................................................TAGCCTCTACTAGGCTTTTCCT.......................................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0
...............................................................TAGCCTCTACTATTCTTTGTCT.......................................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0
...............................................................TAGCCTCTACCCGGCTTTGCCT.......................................................................................................... 22 3 1 1.00 1 0 1 0 0 0 0
...............................................................TAGCCTCTACTAGACTTTTGCT.......................................................................................................... 22 3 1 1.00 1 0 1 0 0 0 0
...........................................................................................................ACATAGCCTATAAGAGGCT................................................................. 19 1 1 1.00 1 0 1 0 0 0 0
...............................................................TAGCGTCTACGAGGCTTTGTC........................................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0
...............................................................TAGCCTCTACTAGGCTTTATCC.......................................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
................................................................AGCCTCTAATAGGCTTTGTCTG......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................................GACATAGCCTCTAAGAGGGTAGT.............................................................. 23 3 1 1.00 1 0 1 0 0 0 0
...........................................................................................................AAAGAGCCTATAATAGGTTAGG.............................................................. 22 3 1 1.00 1 0 0 0 1 0 0
...............................................................TAGCCTCTACGGGGCTTTGTCT.......................................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0
...............................................................TAGCCTCGACGGGGCTTTGTCT.......................................................................................................... 22 3 1 1.00 1 0 0 0 1 0 0
...............................................................TAGCCTCTACTACGCTTTGTGT.......................................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0
...........................................................................................................ACATAGCCTATAAGAGGTTAGGG............................................................. 23 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................................ACATAGCCTATAAGAGGTTAGGAAA........................................................... 25 3 1 1.00 1 1 0 0 0 0 0
...........................................................................................................ACATAGCTTATAACAGGTCAGG.............................................................. 22 3 1 1.00 1 0 0 0 1 0 0
................................................................AGCCTCTACTAGGCTTTG............................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................ACATAGCCTATAAGAGGGTACG.............................................................. 22 2 1 1.00 1 0 0 0 1 0 0
...........................................................................................................ATATAGCCTATAAGAGGTTA................................................................ 20 1 1 1.00 1 0 0 0 1 0 0
...............................................................TAGCCTCTACTAGGCTTTGTCGG......................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
...............................................................TAGCCTCTACTAGGCCTTGTCTT......................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................................ACATAGCCTATAACAGGTTAGG.............................................................. 22 1 1 1.00 1 0 1 0 0 0 0
..................................................................CCTCTACTAGGCTTTGTCTGT........................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0
...........................................................................................................ACATAGCCTATAAGAAGTCAGG.............................................................. 22 2 1 1.00 1 0 0 0 1 0 0
...............................................................TAGCCGCTACCAGGCTTTGTCT.......................................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0
...........................................................................................................ACATAGCCTATAAACGGTTAGG.............................................................. 22 2 1 1.00 1 0 1 0 0 0 0
...............................................................TAGCCCCTACTGGGCTTTGTCTC......................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0
...............................................................TAGCCTCTACTGGGCTTTGTGT.......................................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0
...........................................................................................................ACATAGCCTATAAGAGGT.................................................................. 18 0 1 1.00 1 1 0 0 0 0 0
...................................................................CTCCACTAGGCTTTGTCT.......................................................................................................... 18 1 1 1.00 1 0 0 0 0 1 0
...............................................................TAGCCTCTACTAGCCTTTGTCA.......................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
...............................................................................................................AGCCTATAAGAGGTTAGG.............................................................. 18 0 1 1.00 1 1 0 0 0 0 0
...............................................................TATCCTCTACTAGCCTTTGTCT.......................................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0
...........................................................................................................ACATAGCCTATAAGAGGCTAGGT............................................................. 23 1 1 1.00 1 0 1 0 0 0 0
...........................................................................................................ACATAGCCTATAAGAGGGTAGT.............................................................. 22 2 1 1.00 1 0 0 0 0 1 0
...........................................................................................................ACATAGCCTATAAGTGGTGATG.............................................................. 22 3 1 1.00 1 0 0 0 1 0 0
...........................................................TAGCTAGCCTCTACTAGGCTTTGTCT.......................................................................................................... 26 2 1 1.00 1 1 0 0 0 0 0
...............................................................TAGCCTCTACTAGGCTTTGTCAATGTA..................................................................................................... 27 3 1 1.00 1 1 0 0 0 0 0
...............................................................TAGCATCTACTAGGATTTGTCT.......................................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0
...............................................................TAGCCTCTACTAGGCCTTGTC........................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
...........................................................................................................ACATAGCCTATACGACGTTAGG.............................................................. 22 2 1 1.00 1 0 0 0 1 0 0
...........................................................................................................ACATACACTATAAGTGGTTAGG.............................................................. 22 3 1 1.00 1 0 0 0 1 0 0
...........................................................................................................ACATAGCCCATAAGAGGTTAGT.............................................................. 22 2 1 1.00 1 0 0 1 0 0 0
...........................................................................................................ACATAGCCTATAAGAGGCTAGCT............................................................. 23 2 1 1.00 1 0 0 0 1 0 0
...............................................................TAGCATATACTAGGCTTTGGCT.......................................................................................................... 22 3 1 1.00 1 0 1 0 0 0 0
...........................................................................................................ACATAGCCTATAAGAGGTTAGGTA............................................................ 24 1 1 1.00 1 0 0 0 1 0 0
...........................................................................................................ACATAGCCTATATGAGGTTACG.............................................................. 22 2 1 1.00 1 0 1 0 0 0 0
...............................................................TAGCCTCTACTAGGCTTTGTCTGA........................................................................................................ 24 1 1 1.00 1 0 1 0 0 0 0
...............................................................TAGCCTCGCCTAGGCTTTTTCT.......................................................................................................... 22 3 1 1.00 1 0 0 0 1 0 0
...............................................................TAGCCTCTACTATGCTTTGT............................................................................................................ 20 1 1 1.00 1 0 0 0 1 0 0
...........................................................................................................ACATAGCCTATAAGATGTTAGG.............................................................. 22 1 1 1.00 1 0 1 0 0 0 0
...............................................................TAGACTCTACTACGCTTTGTCT.......................................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0
.................................................................GCCTCTACTAGGCTTTGTCG.......................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
...............................................................GAGCATCTACTAGGCTTTGTCT.......................................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0
..........................................................................................................GACATAGCTTATAAGAGGTTAG............................................................... 22 1 1 1.00 1 0 0 0 0 1 0
...............................................................TAGCCTCTACTAGGCATTGTC........................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
...............................................................TACACTCCACTAGGCTTTGTCT.......................................................................................................... 22 3 1 1.00 1 0 0 0 1 0 0
...............................................................TAGCCTCTACTAGGCTTTGTCTGGA....................................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0

Anti-sense strand reads

AGACTATTCACCCGCACCGGCCATATTCACACAAACAAGATTTCGCTTACACGGAATATTTAGATCGGAGATGATCCGAAACAGACACGTAAACTTTTGGGCTAGTCTGTATCGGATATTCTCCAATCCACATGGTTCCTTCTTTACGTAGTTTTCGCCTTAGGGCTAATGTCAATGTGAATGCGCTTGCG

***********************************************....((((....(((((((((((..((((((.((((((..................)))))).))))))..))))))))))).....)))).....************************************************ 		Read size # Mismatch Hit Count Total Norm Total V042

embryo
.........................................................................................................TCTGTGTCGGATGTTCTCCGAT................................................................ 22 3 4 0.25 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droPer2 scaffold_65:103900-104090 - dpe-mir-282 Known_mirbase TCTGATAAGTGGGCGTGGC--CGGTATAAGTGT----GTTTGTTCTAAAGC--GA----------ATGTGCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTTGAAAACCCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGAAGAAATGCATCA-A-------------AAGCGGAATCCCGATTACAGTTACACTTACGCG-------------A--ACGC--
dp5 XR_group8:3299943-3300133 - dps-mir-282 Known_mirbase TCTGATAAGTGGGCGTGGT--CGGTATAAGTGT----GTTTGTTCTAAA----GA--------GAATGTGCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTTGAAAACCCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGAAGAAATGCATCA-A-------------AAGCGGAATCCCGATTACAGTTACACTTACGCG-------------A--ACGC--
droWil2 scf2_1100000004949:1999644-1999802 + dwi-mir-282 Known_mirbase TTTTTTGTGTGGGCGTGAT-----------TCCTTTTTTCCTTTATGTAATATTA--------ATAT-ATCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTTGGA------TTCAGACATAGCCTATGAGAGGTTAGGTGTACCAAGGAGAAAATACAACA----------------------AT--CAATTACAGTTG-------------------------------C
droVir3 scaffold_12758:910696-910828 - dvi-mir-282 Known_mirbase TTTTTCAAG-GGGCGGCGT-------------------------------C-CGA-------CAAAT-TTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGATAT-ACGGTCAGACATAGCCTATGAGAGGTTAGGTGTACCAAGGGGA-CAAGCAGCG-A-------------GGGCG--------------------------------------------------
droMoj3 scaffold_6680:1963228-1963404 - dmo-mir-282 Known_mirbase TTTT--------------------------------------TTTTGCG----GT--------GCAT-TTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTTGATAT-AAGATCAGACATAGCCTATGAGAGGTTAGGTGTAGCAAGGGGTC-AAACAGCA-GAGAGCACATATTAAAATGAACTGCCGATTACCGTAATA-----GCGAAACATCGACCTGATA----AC
droGri2 scaffold_15110:607029-607177 + dgr-mir-282 Known_mirbase TGAT--AAATAGTAAAGAC--AGACAAAAGC-T----GGCAGTCTCAAATG--G-----------AA-TTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCACTTTTTCAAT-TCAATCAGACATAGCCTATGAGAGGTTAGGTGTACAAATGGATCAAAGCAACA-A--------------------------------------------------------------------
droAna3 scaffold_13337:7556558-7556737 + dan-mir-282 Known_mirbase ACGT----GTGGGCGTGGC--C------ATGCTCTATGGCCGTTCTAATTC--GAAAATCG-AAAAT-TTCCTTATAGATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAAAG-TCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGACAAGACATCA-C-----------AAAAACGGATTGAAGATTACAGTTA-------------------------------C
droBip1 scf7180000395543:216904-217068 + T-------GTGGGCGTGGCAAT------ATGCTCTA----CGTTCTAAATC--GA--------AAAT-TTCCTTATAGATCTAGCCTCTACTAGGCTTTGTCTGTGTT--TTC--------GATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCAAA-AGTCATCA-T-----------TAAAACGGATTGACGATTACAGTTACC-AA-------------------------AT
droKik1 scf7180000302391:353030-353160 + TC--------------------------------------CGTTCTGAATC-CGA--------GAAT-TTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAAAT-CCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCAAATGTGCAGCGAA-------------AGGCGGAA-----------------------------------------------
droFic1 scf7180000454105:1571251-1571378 + ----------------------------------------------------------------------CCTTTTAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAAAG-CCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGAAAGAGCAGCG-A-------------AGAGGGCGC--CGATTACAGTTTGGCCC-------------------------CC
droEle1 scf7180000491249:2016899-2017057 - CCAGATGA-----------------ACAATACT----TACTGTTCTAACTC--AA--------GAAT-TTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAAAA-CCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGAAAAAGCATCA-A-------------AAACGGCAT--CAATTACGGTTA--------------------------------
droRho1 scf7180000757706:21536-21655 - ----------------------------------------------------------------------CCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAAAA-CCGATCAGACATAGCCTATAAGAGGTTAGGTGTACAAAGGCGAAAAATCAGCA-A-------------AAACGGACT--CGATTACGGTT---------------------------------
droBia1 scf7180000302428:2604039-2604158 + ----------------------------------------------------------------------CCTTTTAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAAA--CCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGAAAAATCATCG-G-------------AATCGGAAC--CGTTTACAGTTT--------------------------------
droTak1 scf7180000415378:123689-123842 - TT------------------------------------------CTAAATC--GAGAATCTGCAATC-TACCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAAAA-TCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGAAAAATCATCAGA-------------AAACGGAAT--CGATTACAGTTTTT-----GGG--------------------AA
droEug1 scf7180000409466:975817-975943 + ----------------------------------------------------------------------CCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCTAAAG-CCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCAAAAAGTCAGCA-A-------------AAACGGAAT--CGATTACAGTTTTT-TT-------------------------AC
dm3 chr3L:3251027-3251147 + dme-mir-282 Known_mirbase ----------------------------------------------------------------------CCTTCTAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAAAG-CCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGAACAATCAGCG-A-------------AAACGGAAT--CGATTACAGTTT--------------------------------
droSim2 3l:3148658-3148795 + dsi-mir-282 Known_mirbase -----------------------------------------GTTCTTAAAC--TA--------AAGT-TTCCTTTTAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAAAG-CCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGAACAATCAGCG-A-------------AAACGGAAT--CGATTACAGTT---------------------------------
droSec2 scaffold_2:3244749-3244884 + dse-mir-282 Known_mirbase TCTT------------------------------------------AAA-A--TA--------AAGT-TTCCTTTTAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAAAG-CCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGTGAACAATCAGCG-A-------------AAACGGAAT--CGATTACAGTT---------------------------------
droYak3 3L:3795944-3796064 + dya-mir-282 Known_mirbase ----------------------------------------------------------------------CCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TACGAAAG-CCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGTGAAAAATCAGCG-A-------------AAACGGAAT--CGATTACAGTTT--------------------------------
droEre2 scaffold_4784:5933703-5933848 + der-mir-282 Known_mirbase TCCAAT----------------------------------CGTTCTATCAC--CA--------CAGT-TTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCAAAAG-CCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGAACAAGCAGCG-A-------------AAACGGAAT--CGATTACAGTTT--------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
TCTGATAAGTGGGCGTGGC--CGGTATAAGTGT----GTTTGTTCTAAAGC--GA----------ATGTGCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTTGAAAACCCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGAAGAAATGCATCA-A-------------AAGCGGAATCCCGATTACAGTTACACTTACGCG-------------A--ACGC--SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.................................................................................TAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................22110137.00101372746799303494781226
.................................................................................TAGCCTCTACTAGGCTTTGTCA...........................................................................................................................................2211349.00134904368951071
...............................................................................................................................ACATAGCCTATAAGAGGTTAGG.............................................................................................2211062.00106206015318418539
.................................................................................TAGCCTCTACTAGGCTTTGTC............................................................................................................................................211519.005192263141468014
..................................................................................AGCCTCTACTAGGCTTTGTCT...........................................................................................................................................211405.0040503972510
...............................................................................................................................ACATAGCCTATAAGAGGTTAG..............................................................................................211180.001800332507520
.................................................................................TAGCCTCTACTAGGCTTTGTCTG..........................................................................................................................................231141.001410111017112
.................................................................................TAGCCTCTACTAGGCTTTGTCTT..........................................................................................................................................231140.00140012521021
.................................................................................TAGCCTCTACTAGGCTTTGTCAA..........................................................................................................................................23198.00980971000
..................................................................................AGCCTCTACTAGGCTTTGTCTG..........................................................................................................................................22196.00960950010
.................................................................................TAGCCTCTACTAGGCTTTGT.............................................................................................................................................20179.0079029429611
.................................................................................TAGCCTCTACTAGGCTTTGTCTA..........................................................................................................................................23167.00670594310
................................................................................................................................CATAGCCTATAAGAGGTTAGG.............................................................................................21156.00560560000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGT............................................................................................23144.0044015012152
...................................................................................GCCTCTACTAGGCTTTGTCT...........................................................................................................................................20139.00390343200
...............................................................................................................................ACATAGCCTATAAGAGGTTAGT.............................................................................................22139.003903051516
..................................................................................AGCCTCTACTAGGCTTTGTCA...........................................................................................................................................21134.00340340000
.....................................................................................CTCTACTAGGCTTTGTCT...........................................................................................................................................18133.003317102112
.................................................................................TAGCCTCTACTAGGCTTTGTCG...........................................................................................................................................22126.00261193300
..............................................................................................................................GACATAGCCTATAAGAGGTTAGG.............................................................................................23125.00250142351
.................................................................................TAGCCTCTACTAGGCTTTGTCC...........................................................................................................................................22125.0025398410
.................................................................................TAGCCTCTACTAGGCTTTGTCTAA.........................................................................................................................................24119.00190190000
..................................................................................AGCCTCTACTAGGCTTTGTC............................................................................................................................................20118.00180180000
..............................................................................................................................GACATAGCCTATAAGAGGTTAG..............................................................................................22118.0018030951
...............................................................................................................................ACATAGCCTATAAGAGGTT................................................................................................19116.0016011482
................................................................................CTAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................23115.00150113100
.................................................................................TAGCCTCTACTAGGCTTTGTAA...........................................................................................................................................22110.0010063001
..................................................................................AGCCTCTACTAGGCTTTGTCTGT.........................................................................................................................................23110.0010080020
...............................................................................................................................ACATAGCCTATAAGAGGTTA...............................................................................................20110.0010020530
.......................................................................................................GTGCA--TTTGAAAACCCGATCAG...................................................................................................................22110.0010060013
....................................................................................CCTCTACTAGGCTTTGTCT...........................................................................................................................................19110.0010070102
..................................................................................AGCCTCTACTAGGCTTTGTCAA..........................................................................................................................................2219.009090000
.................................................................................TAGCCTCTACTAGGCTTTGTCTAAA........................................................................................................................................2518.008080000
..................................................................................AGCCTCTACTAGGCTTTGTCTT..........................................................................................................................................2218.008080000
...................................................................................GCCTCTACTAGGCTTTGTCTG..........................................................................................................................................2118.008080000
.................................................................................TAGCCTCTACTAGGCTTTGTTA...........................................................................................................................................2217.007007000
..................................................................................AGCCTCTACTAGGCTTTGTCTA..........................................................................................................................................2217.007070000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGA............................................................................................2317.007050110
.................................................................................TAGCCTCTACTAGGCTTTGTCTGT.........................................................................................................................................2416.006010320
.................................................................................TAGCCTCTACTAGGCTTTGTCTC..........................................................................................................................................2315.005040010
................................................................................CTAGCCTCTACTAGGCTTTGTCA...........................................................................................................................................2315.005014000
................................................................................................................................CATAGCCTATAAGAGGTTAG..............................................................................................2015.005050000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGTT...........................................................................................2414.004030010
...............................................................................................................................ACATAGCCTATAAGAGGTTAGC.............................................................................................2214.004010210
.................................................................................TAGCCTCTACTAGGCTTTG..............................................................................................................................................1913.003030000
.....................................................................................CTCTACTAGGCTTTGTCA...........................................................................................................................................1813.003012000
.................................................................................TAGCCTCTACTAGGCTTTGTCAT..........................................................................................................................................2313.003021000
.................................................................................TAGCCTCTACTAGGCTTTGTA............................................................................................................................................2113.003000120
..................................................................................AGCCTCTACTAGGCTTTGTCTGA.........................................................................................................................................2313.003030000
.................................................................................TAGCCTCTACTAGGCTTTGTCGA..........................................................................................................................................2312.002020000
..................................................................................AGCCTCTACTAGGCTTTGT.............................................................................................................................................1912.002020000
.....................................................................................CTCTACTAGGCTTTGTCC...........................................................................................................................................1812.002200000
.................................................................................TAGCCTCTACTAGGCTTTGTT............................................................................................................................................2112.002020000
..................................................................................AGCCTCTACTAGGCTTTGTCTAA.........................................................................................................................................2312.002020000
...................................................................................GCCTCTACTAGGCTTTGT.............................................................................................................................................1812.002020000
........................................................................................................TGCA--TTTGAAAACCCGATCAG...................................................................................................................2112.002020000
.................................................................................TAGCCTCTACTAGGCTTTGTCAAA.........................................................................................................................................2412.002020000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGA.............................................................................................2212.002011000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGTA........................................................................................................................................2512.002020000
.................................................................................TAGCCTCTACTAGGCTTTGTGA...........................................................................................................................................2211.001001000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGAAA.......................................................................................................................................2611.001010000
..............................................................................................................................GACATAGCCTATAAGAGGTTAC..............................................................................................2211.001000010
.................................................................................TAGCCTCTACTAGGCTTTGTCTGG.........................................................................................................................................2411.001010000
......................................................................................TCTACTAGGCTTTGTCTG..........................................................................................................................................1811.001000010
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGG............................................................................................2311.001010000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGAAA..........................................................................................2511.001010000
..................................................................................AGCCTCTACTAGGCTTTG..............................................................................................................................................1811.001010000
....................................................................................CCTCTACTAGGCTTTGTCTGT.........................................................................................................................................2111.001000001
...............................................................................................................................ACATAGCCTATAAGAGGT.................................................................................................1811.001010000
...................................................................................................................................AGCCTATAAGAGGTTAGG.............................................................................................1811.001010000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGTA...........................................................................................2411.001000010
.................................................................................TAGCCTCTACTAGGCTTTGTCTGA.........................................................................................................................................2411.001000100
...................................................................................GCCTCTACTAGGCTTTGTCG...........................................................................................................................................2011.001010000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGGA........................................................................................................................................2511.001010000
dp5
TCTGATAAGTGGGCGTGGT--CGGTATAAGTGT----GTTTGTTCTAAA----GA--------GAATGTGCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTTGAAAACCCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGAAGAAATGCATCA-A-------------AAGCGGAATCCCGATTACAGTTACACTTACGCG-------------A--ACGC--SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.................................................................................TAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................22132121.0032121391828811241941157368632904365591008
...............................................................................................................................ACATAGCCTATAAGAGGTTAGG.............................................................................................2215458.005458045622936113302954860213
.................................................................................TAGCCTCTACTAGGCTTTGTC............................................................................................................................................2112044.002044014241601641624020749
.................................................................................TAGCCTCTACTAGGCTTTGTCA...........................................................................................................................................2211905.001905096612867314931903
..................................................................................AGCCTCTACTAGGCTTTGTCT...........................................................................................................................................2111685.0016850166822242023
.................................................................................TAGCCTCTACTAGGCTTTGTCC...........................................................................................................................................2211080.0010801263526865100000
..................................................................................AGCCTCTACTAGGCTTTGTCTG..........................................................................................................................................221845.0084507984032020513
.................................................................................TAGCCTCTACTAGGCTTTGTCTT..........................................................................................................................................231796.00796368119246220101912
.................................................................................TAGCCTCTACTAGGCTTTGTCTG..........................................................................................................................................231603.00603049231123321653
................................................................................................................................CATAGCCTATAAGAGGTTAGG.............................................................................................211423.00423041900020002
.................................................................................TAGCCTCTACTAGGCTTTGT.............................................................................................................................................201376.003760288213608239
...............................................................................................................................ACATAGCCTATAAGAGGTTAG..............................................................................................211334.0033402042127633763
.................................................................................TAGCCTCTACTAGGCTTTGTCAA..........................................................................................................................................231182.0018201621000001000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGT............................................................................................231179.0017901153863213200
.................................................................................TAGCCTCTACTAGGCTTTGTCTA..........................................................................................................................................231169.001690143503101511
...................................................................................GCCTCTACTAGGCTTTGTCT...........................................................................................................................................201132.00132012602010102
..............................................................................................................................GACATAGCCTATAAGAGGTTAGG.............................................................................................231124.00124011600530000
..................................................................................AGCCTCTACTAGGCTTTGTC............................................................................................................................................201111.00111011100000000
..................................................................................AGCCTCTACTAGGCTTTGTCTGT.........................................................................................................................................23192.009208082100010
..................................................................................AGCCTCTACTAGGCTTTGTCA...........................................................................................................................................21186.008608500100000
................................................................................CTAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................23171.0071031225460111
...................................................................................GCCTCTACTAGGCTTTGTCTG..........................................................................................................................................21171.007106400000403
..................................................................................AGCCTCTACTAGGCTTTGTCTT..........................................................................................................................................22156.005605500000001
.......................................................................................................GTGCA--TTTGAAAACCCGATCAG...................................................................................................................22148.004804700001000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGT.............................................................................................22146.00460160121215000
..............................................................................................................................GACATAGCCTATAAGAGGTTAG..............................................................................................22142.004202800444020
.................................................................................TAGCCTCTACTAGGCTTTGTCTAA.........................................................................................................................................24139.003903510000300
.................................................................................TAGCCTCTACTAGGCTTTGTCTGT.........................................................................................................................................24137.003712801041011
.................................................................................TAGCCTCTACTAGGCTTTGTCG...........................................................................................................................................22136.0036020101050000
.................................................................................................................................ATAGCCTATAAGAGGTTAGG.............................................................................................20134.003403400000000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGTT...........................................................................................24132.003202613010010
..................................................................................AGCCTCTACTAGGCTTTGT.............................................................................................................................................19126.002602600000000
...............................................................................................................................ACATAGCCTATAAGAGGTT................................................................................................19126.0026010003110002
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGA............................................................................................23125.002501810000600
.....................................................................................CTCTACTAGGCTTTGTCT...........................................................................................................................................18124.002401400910000
...............................................................................................................................ACATAGCCTATAAGAGGTTA...............................................................................................20122.002201003063000
.................................................................................TAGCCTCTACTAGGCTTTGTCTC..........................................................................................................................................23120.00200961220000
....................................................................................CCTCTACTAGGCTTTGTCT...........................................................................................................................................19119.001901900000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTAAA........................................................................................................................................25119.001901700000200
................................................................................................................................CATAGCCTATAAGAGGTTAG..............................................................................................20118.001801800000000
..................................................................................AGCCTCTACTAGGCTTTGTCAA..........................................................................................................................................22117.001701700000000
..................................................................................AGCCTCTACTAGGCTTTGTCTA..........................................................................................................................................22116.001601600000000
...................................................................................GCCTCTACTAGGCTTTGTC............................................................................................................................................19111.001101100000000
.................................................................................TAGCCTCTACTAGGCTTTGTCAAA.........................................................................................................................................24111.00110900000200
.................................................................................TAGCCTCTACTAGGCTTTGTAA...........................................................................................................................................22111.00110900200000
...................................................................................GCCTCTACTAGGCTTTGTCTGT.........................................................................................................................................22111.001101100000000
..................................................................................AGCCTCTACTAGGCTTTGTCTGA.........................................................................................................................................23110.001001000000000
................................................................................CTAGCCTCTACTAGGCTTTGTCC...........................................................................................................................................23110.001000010000000
...................................................................................GCCTCTACTAGGCTTTGTCTT..........................................................................................................................................2119.0090900000000
.................................................................................TAGCCTCTACTAGGCTTTGTAAA..........................................................................................................................................2319.0090900000000
.................................................................................TAGCCTCTACTAGGCTTTGTCAT..........................................................................................................................................2318.0080520100000
.................................................................................TAGCCTCTACTAGGCTTTGTT............................................................................................................................................2118.0080800000000
................................................................................................................................CATAGCCTATAAGAGGTTAGGT............................................................................................2217.0070600001000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGC............................................................................................2317.0070402100000
.......................................................................................................GTGCA--TTTGAAAACCCGATCA....................................................................................................................2116.0060400101000
........................................................................................................TGCA--TTTGAAAACCCGATCAG...................................................................................................................2116.0060600000000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGAA...........................................................................................2416.0060600000000
..............................................................................ATCTAGCCTCTACTAGGCTTTGTCC...........................................................................................................................................2515.0050014000000
.................................................................................TAGCCTCTACTAGGCTTTGTCGA..........................................................................................................................................2315.0050500000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGA.........................................................................................................................................2415.0050500000000
........................................................................................................TGCA--TTTGAAAACCCGATCA....................................................................................................................2015.0050500000000
....................................................................................CCTCTACTAGGCTTTGTCTG..........................................................................................................................................2015.0050500000000
..................................................................................AGCCTCTACTAGGCTTTGTCTGTT........................................................................................................................................2414.0040400000000
..................................................................................AGCCTCTACTAGGCTTTGTCC...........................................................................................................................................2114.0040121000000
...................................................................................................................................AGCCTATAAGAGGTTAGG.............................................................................................1814.0040400000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTCC.........................................................................................................................................2414.0040211000000
.................................................................................TAGCCTCTACTAGGCTTTG..............................................................................................................................................1914.0040400000000
................................................................................................................................CATAGCCTATAAGAGGTTAGGTT...........................................................................................2314.0040400000000
.......................................................................................................GTGCA--TTTGAAAACCCGATC.....................................................................................................................2014.0040400000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGGC........................................................................................................................................2514.0040400000000
..............................................................................ATCTAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................2514.0040004000000
..................................................................................AGCCTCTACTAGGCTTTGTCTGC.........................................................................................................................................2314.0040040000000
...................................................................................GCCTCTACTAGGCTTTGTCA...........................................................................................................................................2014.0040400000000
.................................................................................TAGCCTCTACTAGGCTTTGTCAC..........................................................................................................................................2313.0030300000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGG.........................................................................................................................................2413.0030300000000
...............................................................................................................................ACATAGCCTATAAGAGGTTTT..............................................................................................2113.0030201000000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGG............................................................................................2313.0030200100000
................................................................................CTAGCCTCTACTAGGCTTTGTC............................................................................................................................................2213.0030201000000
................................................................................CTAGCCTCTACTAGGCTTTGTCA...........................................................................................................................................2313.0030100200000
.................................................................................TAGCCTCTACTAGGCTTTGTCCC..........................................................................................................................................2313.0030003000000
..................................................................................AGCCTCTACTAGGCTTTGTCG...........................................................................................................................................2113.0030300000000
...............................................................................TCTAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................2413.0030001200000
..............................................................................................................................GACATAGCCTATAAGAGGTTA...............................................................................................2113.0030300000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGTA........................................................................................................................................2513.0030300000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGTT........................................................................................................................................2513.0030300000000
..............................................................................................................................GACATAGCCTATAAGAGGTT................................................................................................2013.0030101001000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGA.............................................................................................2213.0030201000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTTAA........................................................................................................................................2513.0030300000000
.................................................................................TAGCCTCTACTAGGCTTTGTTC...........................................................................................................................................2213.0030020100000
.................................................................................TAGCCTCTACTAGGCTTTGTCTTA.........................................................................................................................................2412.0020200000000
...........................................................................................................................TCAGACATAGCCTATAAGAGG..................................................................................................2112.0020100000010
...........................................................................................................................TCAGACATAGCCTATAAGAGGTTAGG.............................................................................................2612.0020200000000
...................................................................................GCCTCTACTAGGCTTTGTCAA..........................................................................................................................................2112.0020200000000
....................................................................................CCTCTACTAGGCTTTGTC............................................................................................................................................1812.0020200000000
.................................................................................................................................ATAGCCTATAAGAGGTTAGGTT...........................................................................................2212.0020200000000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGAAA..........................................................................................2512.0020200000000
.........................ATAAGTGT----GTTTGTTCTAAA----GA--------GA.................................................................................................................................................................................2412.0020000000002
.................................................................................TAGCCTCTACTAGGCTTTGTTA...........................................................................................................................................2212.0020000110000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGC.........................................................................................................................................2412.0020101000000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGC.............................................................................................2212.0020101000000
...............................................................................................................................ACATAGCCTATAAGAGGTTT...............................................................................................2012.0020200000000
.................................................................................................................................ATAGCCTATAAGAGGTTAG..............................................................................................1912.0020000000200
..............................................................................................................................GACATAGCCTATAAGAGGTTAGGT............................................................................................2412.0020100100000
.................................................................................TAGCCTCTACTAGGCTTTGTA............................................................................................................................................2112.0020100010000
..................................................................................AGCCTCTACTAGGCTTTGTCTGAAA.......................................................................................................................................2512.0020200000000
.................................................................................TAGCCTCTACTAGGCTTTGTAG...........................................................................................................................................2212.0020200000000
.................................................................................TAGCCTCTACTAGGCTTTGC.............................................................................................................................................2012.0020020000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTTGT........................................................................................................................................2512.0020110000000
droWil2
TTTTTTGTGTGGGCGTGAT-----------TCCTTTTTTCCTTTATGTAATATTA--------ATAT-ATCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTTGGA------TTCAGACATAGCCTATGAGAGGTTAGGTGTACCAAGGAGAAAATACAACA----------------------AT--CAATTACAGTTG-------------------------------CSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.................................................................................TAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................22118306.0018306324620223310574973
.................................................................................TAGCCTCTACTAGGCTTTGTCA...........................................................................................................................................22110625.0010625023841036122
...............................................................................................................................ACATAGCCTATGAGAGGTTAGG.............................................................................................2212952.00295210163551757499
.................................................................................TAGCCTCTACTAGGCTTTGTC............................................................................................................................................211825.0082562901248433
...............................................................................................................................ACATAGCCTATGAGAGGTTAG..............................................................................................211545.00545821841167111
..................................................................................AGCCTCTACTAGGCTTTGTCT...........................................................................................................................................211533.0053315090221
.................................................................................TAGCCTCTACTAGGCTTTGTCTG..........................................................................................................................................231521.00521648222110
.................................................................................TAGCCTCTACTAGGCTTTGT.............................................................................................................................................201306.003062571022512
.................................................................................TAGCCTCTACTAGGCTTTGTCTA..........................................................................................................................................231180.0018001230570
................................................................................................................................CATAGCCTATGAGAGGTTAGG.............................................................................................211140.001400136040
.................................................................................TAGCCTCTACTAGGCTTTGTCC...........................................................................................................................................22185.008539200224
.................................................................................TAGCCTCTACTAGGCTTTGTCAA..........................................................................................................................................23167.00670310360
.................................................................................TAGCCTCTACTAGGCTTTGTCTAA.........................................................................................................................................24165.00650460190
.................................................................................TAGCCTCTACTAGGCTTTGTCTT..........................................................................................................................................23161.0061352141
...............................................................................................................................ACATAGCCTATGAGAGGTTAGGT............................................................................................23159.00590224249
.................................................................................TAGCCTCTACTAGGCTTTGTCG...........................................................................................................................................22158.0058270490
..............................................................................................................................GACATAGCCTATGAGAGGTTAGG.............................................................................................23154.00540341118
...................................................................................GCCTCTACTAGGCTTTGTCT...........................................................................................................................................20153.0053152000
.................................................................................TAGCCTCTACTAGGCTTTGTCTAAA........................................................................................................................................25151.0051047040
..................................................................................AGCCTCTACTAGGCTTTGTCTG..........................................................................................................................................22151.0051051000
...............................................................................................................................ACATAGCCTATGAGAGGTTA...............................................................................................20149.00490522517
...............................................................................................................................ACATAGCCTATGAGAGGTT................................................................................................19147.00470751025
.....................................................................................CTCTACTAGGCTTTGTCT...........................................................................................................................................18145.0045208746
................................................................................CTAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................23141.00410130244
...............................................................................................................................ACATAGCCTATGAGAGGTTAGT.............................................................................................22135.0035028619
....................................................................................CCTCTACTAGGCTTTGTCT...........................................................................................................................................19130.0030912117
...............................................................................................................................ACATAGCCTATGAGAGGTTAGA.............................................................................................22129.0029080138
..................................................................................AGCCTCTACTAGGCTTTGTCA...........................................................................................................................................21128.0028022060
..............................................................................................................................GACATAGCCTATGAGAGGTTAG..............................................................................................22122.0022072103
..................................................................................AGCCTCTACTAGGCTTTGTC............................................................................................................................................20121.0021021000
.................................................................................TAGCCTCTACTAGGCTTTGTAA...........................................................................................................................................22118.0018030150
................................................................................CTAGCCTCTACTAGGCTTTGTCA...........................................................................................................................................23116.0016000160
.................................................................................................................................ATAGCCTATGAGAGGTTAGG.............................................................................................20116.0016013012
.................................................................................TAGCCTCTACTAGGCTTTG..............................................................................................................................................19115.0015014010
..................................................................................AGCCTCTACTAGGCTTTGTCTA..........................................................................................................................................22114.0014014000
...............................................................................................................................ACATAGCCTATGAGAGGTTAGGA............................................................................................23113.001308050
.................................................................................TAGCCTCTACTAGGCTTTGTCAT..........................................................................................................................................23110.001001090
................................................................................................................................CATAGCCTATGAGAGGTTAG..............................................................................................20110.0010010000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGT.........................................................................................................................................24110.001026011
.................................................................................TAGCCTCTACTAGGCTTTGTCTC..........................................................................................................................................2318.00807010
...............................................................................................................................ACATAGCCTATGAGAGGTTAGGAA...........................................................................................2417.00701060
.................................................................................TAGCCTCTACTAGGCTTTGTTA...........................................................................................................................................2216.00600060
..................................................................................................................................TAGCCTATGAGAGGTTAGG.............................................................................................1916.00603003
.................................................................................TAGCCTCTACTAGGCTTTGTCTCC.........................................................................................................................................2416.00606000
.................................................................................TAGCCTCTACTAGGCTTTGTCAAA.........................................................................................................................................2416.00603030
..................................................................................AGCCTCTACTAGGCTTTGTCTAA.........................................................................................................................................2315.00505000
.................................................................................TAGCCTCTACTAGGCTTTGTAAA..........................................................................................................................................2315.00504010
..............................................................................................................................GACATAGCCTATGAGAGGTT................................................................................................2015.00500014
..................................................................................AGCCTCTACTAGGCTTTGTCAA..........................................................................................................................................2214.00404000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGA.........................................................................................................................................2414.00403010
.................................................................................TAGCCTCTACTAGGCTTTGTA............................................................................................................................................2113.00302010
...............................................................................TCTAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................2413.00301020
..................................................................................AGCCTCTACTAGGCTTTG..............................................................................................................................................1813.00303000
...............................................................................TCTAGCCTCTACTAGGCTTTGTCA...........................................................................................................................................2413.00300030
...............................................................................................................................ACATAGCCTATGAGAGGTTAGC.............................................................................................2213.00303000
..................................................................................AGCCTCTACTAGGCTTTGTCTAAA........................................................................................................................................2413.00303000
..................................................................................AGCCTCTACTAGGCTTTGTCTGT.........................................................................................................................................2313.00303000
.................................................................................TAGCCTCTACTAGGCTTTGTCTCA.........................................................................................................................................2412.00202000
......................................................................................TCTACTAGGCTTTGTCTG..........................................................................................................................................1812.00220000
................................................................................................................................CATAGCCTATGAGAGGTT................................................................................................1812.00202000
................................................................................................................................CATAGCCTATGAGAGGTTA...............................................................................................1912.00202000
.................................................................................TAGCCTCTACTAGGCTTTGTT............................................................................................................................................2112.00201010
...................................................................................GCCTCTACTAGGCTTTGTCTG..........................................................................................................................................2112.00202000
...............................................................................................................................ACATAGCCTATGAGAGGTTAGGTT...........................................................................................2412.00201010
...............................................................................................................................ACATAGCCTATGAGAGGT.................................................................................................1812.00201001
.................................................................................TAGCCTCTACTAGGCTTTGTGA...........................................................................................................................................2212.00200020
.................................................................................TAGCCTCTACTAGGCTTTGTCTACA........................................................................................................................................2512.00202000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGG.........................................................................................................................................2412.00211000
.................................................................................TAGCCTCTACTAGGCTTTGTCTCCT........................................................................................................................................2512.00202000
.................................................................................TAGCCTCTACTAGGCTTTGTCTCCC........................................................................................................................................2512.00202000
...................................................................................GCCTCTACTAGGCTTTGTC............................................................................................................................................1912.00202000
.....................................................................................CTCTACTAGGCTTTGTCC...........................................................................................................................................1812.00220000
..................................................................................................................................TAGCCTATGAGAGGTTAG..............................................................................................1812.00201001
.................................................................................................................................ATAGCCTATGAGAGGTTAG..............................................................................................1912.00201010
..................................................................................AGCCTCTACTAGGCTTTGTCC...........................................................................................................................................2111.00110000
..................................................................................AGCCTCTACTAGGCTTTGT.............................................................................................................................................1911.00101000
...............................................................................................................................ACATAGCCTATGAGAGGTTAGGAAC..........................................................................................2511.00101000
....................................................................................................................................GCCTATGAGAGGTTAGGT............................................................................................1811.00101000
..................................................................................AGCCTCTACTAGGCTTTGTCTC..........................................................................................................................................2211.00101000
.................................................................................TAGCCTCTACTAGGCTTTGTCCCA.........................................................................................................................................2411.00101000
..............................................................................................................................GACATAGCCTATGAGAGGTA................................................................................................2011.00100010
................................................................................................................TGGA------TTCAGACATAGCCTATGAGAGG..................................................................................................2611.00101000
..............................................................................ATCTAGCCTCTACTAGGCTTTGTCA...........................................................................................................................................2511.00100010
...................................................................................GCCTCTACTAGGCTTTGTCTAAA........................................................................................................................................2311.00101000
................................................................................CTAGCCTCTACTAGGCTTTGTC............................................................................................................................................2211.00101000
..............................................................................................................................GACATAGCCTATGAGAGGTTAGGA............................................................................................2411.00100010
..................................................................................AGCCTCTACTAGGCTTTGTCTGTGCA--....................................................................................................................................2611.00101000
...................................................................................GCCTCTACTAGGCTTTGTCA...........................................................................................................................................2011.00100010
...............................................................................................................................ACATAGCCTATGAGAGGTTAGAAA...........................................................................................2411.00100010
.............................................................................................................................AGACATAGCCTATGAGAGGTTAGC.............................................................................................2411.00100001
...................................................................................GCCTCTACTAGGCTTTGT.............................................................................................................................................1811.00101000
.................................................................................TAGCCTCTACTAGGCTTTGTTG...........................................................................................................................................2211.00110000
.............................................................................................................................AGACATAGCCTATGAGAGGTTAG..............................................................................................2311.00100010
.................................................................................................................................ATAGCCTATGAGAGGTTAGGT............................................................................................2111.00101000
.................................................................................TAGCCTCTACTAGGCTTTGTCTAAT........................................................................................................................................2511.00100010
.................................................................................TAGCCTCTACTAGGCTTTGTCTGGCT.......................................................................................................................................2611.00101000
droVir3
TTTTTCAAG-GGGCGGCGT-------------------------------C-CGA-------CAAAT-TTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGATAT-ACGGTCAGACATAGCCTATGAGAGGTTAGGTGTACCAAGGGGA-CAAGCAGCG-A-------------GGGCG--------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.................................................................................TAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................221335748.0033574815210021221140333435301908722110183166141990114388830057941630110616364370273063881036814064146532864030564129131784868312466898444145135522071812789852672228691141612102757747665215212217914765622781631103608327935681102106363766110389344223330240301
...............................................................................................................................ACATAGCCTATGAGAGGTTAGG.............................................................................................22147212.0047212511038892341365172159159130601667135401371220500156184282392159048511989083174240216941942516248076944896812671401684516720000000010111000020093685460038974039373116312712162332196798
.................................................................................TAGCCTCTACTAGGCTTTGTCTA..........................................................................................................................................23119228.001922800425511854260180918530213311107360134516112583310413103138111113161730126079753650000000000000010000101003082289271118338420200
...............................................................................................................................ACATAGCCTATGAGAGGTTAG..............................................................................................21114742.001474241826216425188206137332664242481533602861471414735773084802571060676631799220870415250495739117341244767200000000000000000001514214607213101015321801000
.................................................................................TAGCCTCTACTAGGCTTTGTCA...........................................................................................................................................22111790.00117900115755010271340121344132520110321107437883911390549139516645910067831476733375600000000000000000001035306462954152631210032
.................................................................................TAGCCTCTACTAGGCTTTGTC............................................................................................................................................21111321.001132110410441331261782881567224004118612246147384119913035570324522565862640670316261564122631264647623547936800000021100000110102194026802143584535505400000
.................................................................................TAGCCTCTACTAGGCTTTGTCTAA.........................................................................................................................................2415244.0052440076313046050000100000200232349464667797110030104525103652316420000000000000000000300042941341014104000000
.................................................................................TAGCCTCTACTAGGCTTTGTCC...........................................................................................................................................2213710.003710212158848676712021200105419496299111645121912244355661706475653113614120000000000000000100143310402115430112410416
.................................................................................TAGCCTCTACTAGGCTTTGTCTG..........................................................................................................................................2313344.003344013160373713521736000192961814162935103681181263175151242059527323144278442254500000000000000002100211302710310049331525503000010
.................................................................................TAGCCTCTACTAGGCTTTGTCAA..........................................................................................................................................2312850.0028500030161319010103300000000050230126429167110210421762102231054000000000000000000000500019042684020210201041
..................................................................................AGCCTCTACTAGGCTTTGTCT...........................................................................................................................................2112049.002049001877128100100106102232225491711117311773155536000000000000000000004001200000100000001
.................................................................................TAGCCTCTACTAGGCTTTGTCTT..........................................................................................................................................2311933.00193320355131716242500001422563711141431443763991471276510231974084080382531290000000000101022221322127124010107759400011
...............................................................................................................................ACATAGCCTATGAGAGGTTAGGT............................................................................................2311700.001700007871935201125171301845291448122930547131392892757710820105193938454929436300000000000000000001132357606500023255700000
..............................................................................................................................GACATAGCCTATGAGAGGTTAG..............................................................................................2211460.00146000620161811315511010209214814123929278343116925262227147131387312463452500000000000000000000480451600001000001000
.................................................................................TAGCCTCTACTAGGCTTTGT.............................................................................................................................................2011438.001438015032121424319540311121313144278143308670314484123213369682128220000000000000000100032053100034441400000
.................................................................................TAGCCTCTACTAGGCTTTGTCTC..........................................................................................................................................2311366.001366001307716110210000116122215481113920152172411303606965549440000000000000000000000031400023248100000
.....................................................................................CTCTACTAGGCTTTGTCT...........................................................................................................................................1811295.00129511141404718557200223000208013810310115272231524221050000010001000004363670020000036730312420453260055
..............................................................................................................................GACATAGCCTATGAGAGGTTAGG.............................................................................................2311067.0010670017636105333104574250685201630331037946521163127333851347800000000000000001013863776133000001000010
.......................................................................................................GTGCA--TTCGATAT-ACGGTCAG...................................................................................................................2111032.001032910170621500120003512104141791219136949361710127510000000000000005400311042000102214851619710901001
................................................................................................................................CATAGCCTATGAGAGGTTAGG.............................................................................................211991.00991009270101000000101100001336458333402410222000000000000000000001001100000000000000
................................................................................CTAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................231892.00892006416213010000014641551222125935559991324819523064286562856000000000000000100001000000000000000000
...............................................................................................................................ACATAGCCTATGAGAGGTTAGGA............................................................................................231800.008000033580301100029641941332024824267655815625394444195457800000000000000000000030723100043031200000
..................................................................................AGCCTCTACTAGGCTTTGTCTG..........................................................................................................................................221777.007771019320171306000030022117722275953173883331042324422100000000000000000000010014310013137715910000
....................................................................................CCTCTACTAGGCTTTGTCT...........................................................................................................................................191719.0071911150461504020000100214121716423122645547101537117102000000000000184156001100003351516211201950022
.................................................................................TAGCCTCTACTAGGCTTTGTCTCC.........................................................................................................................................241699.00699152175808000000000000106001002067918217604000001200000000000000000100021060008103210600000
.................................................................................TAGCCTCTACTAGGCTTTGTCTAAA........................................................................................................................................251614.0061400450001010100000000000033639576100001603119241700000000000000000000000001648320233011201001
...............................................................................................................................ACATAGCCTATGAGAGGTTAGGAA...........................................................................................241576.0057600110102010210101200211582667330100347043671182325100000000000000000001000571500000000100000
.................................................................................TAGCCTCTACTAGGCTTTGTCTTC.........................................................................................................................................241566.00566002641120001000034000213211135210011952174160110119000000000000000010000120100001202100000
...............................................................................................................................ACATAGCCTATGAGAGGTTA...............................................................................................201481.00481001714611340000311192911633150615721112419427781391666220000000000000000000127500232000000010001
.................................................................................TAGCCTCTACTAGGCTTTGTAA...........................................................................................................................................221335.0033500760100000000100000050042272980001801293041000000000000000000000000610532010000000000
.................................................................................TAGCCTCTACTAGGCTTTGTAAA..........................................................................................................................................231325.0032500501000000000000000000011932180000205615310000000000000000000000008310610000000000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGT.........................................................................................................................................241304.00304001204613173100010121154712210172161961447619541340000000000000001300113115110119848800000
.................................................................................TAGCCTCTACTAGGCTTTGTCG...........................................................................................................................................221262.002628410033602020003000005101514716130101142172923151140000000000000000000300001134033110400000
...............................................................................................................................ACATAGCCTATGAGAGGTTAGT.............................................................................................221245.002450014381551756047521501098175313821122426611860000000000000000000342601000024110000000
...............................................................................................................................ACATAGCCTATGAGAGGTT................................................................................................191238.00238003408101001120117327335511126434261701002309250000000000000001000114801200000030000000
.................................................................................................................................ATAGCCTATGAGAGGTTAGG.............................................................................................201218.0021800119110109150000000001000431275414210812410000000000000000000000081100001000010000
.................................................................................TAGCCTCTACTAGGCTTTGTCAAA.........................................................................................................................................241202.002020023100100000000000000003121539600005044603000000000000000000000000592001000000000000
...............................................................................................................................ACATAGCCTATGAGAGGTTAGGAAA..........................................................................................251200.002000011001000100100000000011853113000080720196500000000000000000000100054700000000000000
...................................................................................GCCTCTACTAGGCTTTGTCT...........................................................................................................................................201182.001820011600020000000110010002100164505407105133000000000000000020000000100100000000000
...............................................................................................................................ACATAGCCTATGAGAGGTTAGA.............................................................................................221162.00162001702100102011511121134454151312071124136155000000000000000000012608300000000000000
..................................................................................AGCCTCTACTAGGCTTTGTCA...........................................................................................................................................211149.00149001440000000000000000000000000000000201100000000000000000000010000000000000000000
...............................................................................................................................ACATAGCCTATGAGAGGTTAGGTC...........................................................................................241140.001400020010000600002110013010011017281033040000016000000000000000000020100000000000000000
.................................................................................TAGCCTCTACTAGGCTTTGTCCT..........................................................................................................................................231139.0013900200100010000300000811110003716124404000005000000000000000000000000000002000000000
..................................................................................AGCCTCTACTAGGCTTTGTCTGT.........................................................................................................................................231118.0011802911000200010210000101322845617309565200000000000000001000000001302032240110000
.................................................................................TAGCCTCTACTAGGCTTTGTCCA..........................................................................................................................................231114.001140016120400000101101000005420754284101514820000000000000000000000000510000000000000
.................................................................................TAGCCTCTACTAGGCTTTGTCCC..........................................................................................................................................231114.0011400141042000000010000060000000825143202000012000000000000000000000000000000002000000
..................................................................................AGCCTCTACTAGGCTTTGTC............................................................................................................................................20198.009800960000001000000000000001000000000000000000000000000000000000000000000000000000
...............................................................................................................................ACATAGCCTATGAGAGGTTAGGTAA..........................................................................................25191.009100100020000000000000000055920000120816115100000000000000000000000011300000000000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTTA.........................................................................................................................................24186.00860060000000000001000000024491010104061045100000000000000000000000031500000000000000
.................................................................................TAGCCTCTACTAGGCTTTGTA............................................................................................................................................21182.0082002601020000000000000100231410000805118410000000000000000000000000400000000000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTTAA........................................................................................................................................25172.0072001000100010000000000000643140000302833100000000000000000000000013900000000000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTCCC........................................................................................................................................25167.00670010000000000000000001000000154131901000002000000000000000000000010100013301100000
..............................................................................................................................GACATAGCCTATGAGAGGTTA...............................................................................................21166.00660010000010000021021002524156341311251401000000000000000000001000010100000010003
................................................................................................................................CATAGCCTATGAGAGGTTAG..............................................................................................20157.005700530000000000000000001100010000000000100000000000000000000000000000000000000000
.......................................................................................CTACTAGGCTTTGTCT...........................................................................................................................................16157.0057000000000000000000000000000000000000000000000000000001028280000000000000000000000
...............................................................................................................................ACATAGCCTATGAGAGGTTAGGTA...........................................................................................24154.00540032000000000000000000103453100071396220000000000000000000000000200000000000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGA.........................................................................................................................................24153.00531070101000000000010001012395100020223110000000000000000000000001001011300200000
.................................................................................TAGCCTCTACTAGGCTTTGTCTCA.........................................................................................................................................24151.00510030001000000000000000011100110000417101010000000000000000000000000000000000000000
...............................................................................................................................ACATAGCCTATGAGAGGTTAGGTT...........................................................................................24146.00460051000000000050130200600063400201010001000000000000000000000003200000000000000
..................................................................................AGCCTCTACTAGGCTTTGTCTA..........................................................................................................................................22145.004500380000000000000000000000001000000121010000000000000000000000000100000000000000
......................................................................................TCTACTAGGCTTTGTCT...........................................................................................................................................17143.004300000000000000000000000000000000000000001100000000001001090000000032200000041054
..................................................................................................................................TAGCCTATGAGAGGTTAGG.............................................................................................19143.004300230010111200000000000020041000200000001000000000000000000000000200000100100000
..................................................................................AGCCTCTACTAGGCTTTGT.............................................................................................................................................19142.004200420000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................TCTAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................24141.00410021001000000001010100011472331320211300000000000000000000000000000000000000000
..................................................................................AGCCTCTACTAGGCTTTGTCTT..........................................................................................................................................22138.003800350000000000000000010000000000000000100000000000000000000000000000001000000000
..............................................................................................................................GACATAGCCTATGAGAGGTTAGGA............................................................................................24136.00360030020000000001000001001144021020142110000000000000000000000002300000000000000
..................................................................................AGCCTCTACTAGGCTTTGTCC...........................................................................................................................................21136.003600360000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................ATAGCCTATGAGAGGTTAG..............................................................................................19135.003500150002040100000000001100010020110021201000000000000000000000000000000000000000
................................................................................CTAGCCTCTACTAGGCTTTGTCTA..........................................................................................................................................24133.00330000000000000000000000001572000020355300000000000000000000000000000000000000000
.................................................................................TAGCCTCTACTAGGCTTTGTCAT..........................................................................................................................................23133.00330043100000000000000000043231000010112030000000000000000000000000310000000000000
...............................................................................................................................ACATAGCCTATGAGAGGTTAGGAT...........................................................................................24131.00311013000000000000000000000030100000020000000000000000000000000003000045430100000
...............................................................................................................................ACATAGCCTATGAGAGGTTAGGC............................................................................................23131.00310023100000000000001110200110551000010100000000000000000000003000000000010100000
..............................................................................ATCTAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................25131.00310010000000000010100001001245012330121200000000000000000000000000000000000000000
................................................................................CTAGCCTCTACTAGGCTTTGTCA...........................................................................................................................................23131.00310030000000000000000000015133000010533300000000000000000000000000000000000000000
..............................................................................................................................GACATAGCCTATGAGAGGTTAGGT............................................................................................24130.00300030010220000000010101011062230300000000000000000000000000000010000000000000000
.................................................................................TAGCCTCTACTAGGCTTTGTTC...........................................................................................................................................22130.00300000000000000001010060000000491600000000000000000000000000000000200000000000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTCCT........................................................................................................................................25228.5057205002000000000000001000001010722101000000000000000000000000000030200000000000000
..................................................................................AGCCTCTACTAGGCTTTGTCAA..........................................................................................................................................22128.002800280000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTTCC........................................................................................................................................25126.002600010000000000010000000000002641100000001000000000000000000000000000000000000000
...............................................................................................................................ACATAGCCTATGAGAGGTTAGC.............................................................................................22126.00260010000000001010000001120000310101010000000000000000000000007102200000000000000
................................................................................CTAGCCTCTACTAGGCTTTGTC............................................................................................................................................22125.00250030000010000010000010103031110110140110000000000000000000000000000000000000000
...........................................................................................................................TCAGACATAGCCTATGAGAGGTT................................................................................................23125.00250000000010001100000000000020030100002010000000000000000100000000001011004400010
.....................................................................................CTCTACTAGGCTTTGTCA...........................................................................................................................................18125.00250030003000000100000000032000000000301021000000000000000000010000000000000000023
...............................................................................................................................ACATAGCCTATGAGAGGTTAGGG............................................................................................23124.00240030000010100001000100001011100110010400000000000000000000002003100000000000000
...............................................................................................................................ACATAGCCTATGAGAGGTTAA..............................................................................................21124.00240040001010000000000020101024100100103100000000000000000000001000000000000000000
.................................................................................TAGCCTCTACTAGGCTTTGTAG...........................................................................................................................................22124.00240040000000000000000030001000000020310200000000000000000000000000015000000000110
...............................................................................................................................ACATAGCCTATGAGAGGT.................................................................................................18123.00230020000000000011121032101010000101000011000000000000000000000000000002001000000
.................................................................................TAGCCTCTACTAGGCTTTGTCCCC.........................................................................................................................................24122.00220080010000000000000010000000241400000000000000000000000000000000100000000000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTTG.........................................................................................................................................24122.00220080000000000000000000002031000010011000000000000000000000000001200002000000000
.................................................................................TAGCCTCTACTAGGCTTTG..............................................................................................................................................19122.002200130000000000000000000101100020000030010000000000000000000000000000000000000000
...............................................................................................................................ACATAGCCTATGAGAGGTTAGGTCC..........................................................................................25120.002000000000000000000000000000001701000000002000000000000000000000000000000000000000
...............................................................................................................................ACATAGCCTATGAGAGGTTAT..............................................................................................21120.00200000010000000004020121100000000001302000000000000000000000002000000000000000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGTAA.......................................................................................................................................26119.00190010000000000000000000011211000010021100000000000000000000000003000010003000000
...................................................................................................................................AGCCTATGAGAGGTTAGG.............................................................................................18119.001900130000120100000000000000000000000000001000000000000000000000000100000000000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTAC.........................................................................................................................................24118.00180070100000000000000000001032000000110000000100000000000000000000000001000000000
.....................................................................................CTCTACTAGGCTTTGTCTA..........................................................................................................................................19117.00170020102010000000000000021010000010002010000000000000000000000000200000000000010
..............................................................................................................................GACATAGCCTATGAGAGGTTAGGAAA..........................................................................................26117.00170000000000000000000000010141000000043200000000000000000000000000100000000000000
...................................................................................GCCTCTACTAGGCTTTGTCTG..........................................................................................................................................21116.001600140000000000000000000010000000010000000000000000000000000000000000000000000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTCCA........................................................................................................................................25116.00160060000000000000000000000100010000000000000000000000000000000041300000000000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGG.........................................................................................................................................24115.00150090000000000000000000000000000000000000000000000000000000000000301000000002000
................................................................................CTAGCCTCTACTAGGCTTTGTCC...........................................................................................................................................23115.00150045000000000000000000000000012300000000000000000000000000000000000000000000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGTA........................................................................................................................................25114.00140010000000000000000000000102000000120110000000000000000000000102002000000000000
......................................................................................TCTACTAGGCTTTGTCTA..........................................................................................................................................18114.00140010001020100000000000003011000000120100000000000000000000000000000000000000000
.................................................................................TAGCCTCTACTAGGCTTTGTCAC..........................................................................................................................................23114.00140010000000000000000000010011000100030000000000000000000000000001202000100000000
..............................................................................................................................GACATAGCCTATGAGAGGTTAGAAA...........................................................................................25114.00140000000000000000000000000031000000112010000000000000000000000003200000000000000
.................................................................................TAGCCTCTACTAGGCTTT...............................................................................................................................................18114.00140010000000000021010000102111010000100000000000000000000000000000100000000000000
..................................................................................AGCCTCTACTAGGCTTTGTCTCC.........................................................................................................................................23114.001400140000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................GACATAGCCTATGAGAGGTTAGA.............................................................................................23114.00140000000000000010000000011002100100103000000000000000000000000201000000000000000
.................................................................................TAGCCTCTACTAGGCTTTGTT............................................................................................................................................21113.00130030001000000010000020000000010000211001000000000000000000000000000000000000000
...............................................................................................................................ACATAGCCTATGAGAGGTTAGGCA...........................................................................................24113.00130000000000000000000000000000100000153210000000000000000000000000000000000000000
droMoj3
TTTT--------------------------------------TTTTGCG----GT--------GCAT-TTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTTGATAT-AAGATCAGACATAGCCTATGAGAGGTTAGGTGTAGCAAGGGGTC-AAACAGCA-GAGAGCACATATTAAAATGAACTGCCGATTACCGTAATA-----GCGAAACATCGACCTGATA----ACSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.................................................................................TAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................221135622.00135622538682972844667757961475
.................................................................................TAGCCTCTACTAGGCTTTGTCC...........................................................................................................................................22119777.0019777933610196452
.................................................................................TAGCCTCTACTAGGCTTTGTCA...........................................................................................................................................22119437.0019437662333171079348132
...............................................................................................................................ACATAGCCTATGAGAGGTTAGG.............................................................................................22117464.0017464132467555217921644506
.................................................................................TAGCCTCTACTAGGCTTTGTC............................................................................................................................................21112127.001212718454862549993125
.................................................................................TAGCCTCTACTAGGCTTTGTCTC..........................................................................................................................................2317073.007073299035910401019
..................................................................................AGCCTCTACTAGGCTTTGTCT...........................................................................................................................................2115020.00502047907002230
...............................................................................................................................ACATAGCCTATGAGAGGTTAG..............................................................................................2112358.002358165448154195105202
.................................................................................TAGCCTCTACTAGGCTTTGTCAA..........................................................................................................................................2311856.00185613098015380
.................................................................................TAGCCTCTACTAGGCTTTGTCTA..........................................................................................................................................2311314.001314109612121994
................................................................................................................................CATAGCCTATGAGAGGTTAGG.............................................................................................2111115.001115109223864
.................................................................................TAGCCTCTACTAGGCTTTGTCTT..........................................................................................................................................2311027.0010275201415001
................................................................................CTAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................231952.0095213910118001
.................................................................................TAGCCTCTACTAGGCTTTGT.............................................................................................................................................201729.0072931072533075
..................................................................................AGCCTCTACTAGGCTTTGTCTG..........................................................................................................................................221714.00714641123661
.................................................................................TAGCCTCTACTAGGCTTTGTCTG..........................................................................................................................................231668.006686113611307
.................................................................................TAGCCTCTACTAGGCTTTGTCTCC.........................................................................................................................................241635.006353220013075
..................................................................................AGCCTCTACTAGGCTTTGTCA...........................................................................................................................................211568.0056855930060
...................................................................................GCCTCTACTAGGCTTTGTCT...........................................................................................................................................201463.0046345610060
...............................................................................................................................ACATAGCCTATGAGAGGTTAGGT............................................................................................231333.003331172522416761
..............................................................................................................................GACATAGCCTATGAGAGGTTAGG.............................................................................................231307.0030721617464816
..................................................................................AGCCTCTACTAGGCTTTGTCTC..........................................................................................................................................221257.0025725100060
................................................................................CTAGCCTCTACTAGGCTTTGTCC...........................................................................................................................................231229.0022900002290
...............................................................................................................................ACATAGCCTATGAGAGGTT................................................................................................191200.0020054733511540
..................................................................................AGCCTCTACTAGGCTTTGTC............................................................................................................................................201186.00186176000100
...............................................................................................................................ACATAGCCTATGAGAGGTTA...............................................................................................201185.00185431236453712
.....................................................................................CTCTACTAGGCTTTGTCT...........................................................................................................................................181180.00180162700110
...............................................................................................................................ACATAGCCTATGAGAGGTTAGGC............................................................................................231164.0016481022745
.................................................................................TAGCCTCTACTAGGCTTTGTCTAA.........................................................................................................................................241162.00162149300100
..............................................................................................................................GACATAGCCTATGAGAGGTTAG..............................................................................................221124.001246984111517
...............................................................................................................................ACATAGCCTATGAGAGGTTAGT.............................................................................................221121.00121177582361
...............................................................................................................................ACATAGCCTATGAGAGGTTAGGA............................................................................................231119.0011990737102
.................................................................................TAGCCTCTACTAGGCTTTGTCG...........................................................................................................................................221118.00118591900391
.................................................................................TAGCCTCTACTAGGCTTTGTAA...........................................................................................................................................221118.00118103400110
..................................................................................AGCCTCTACTAGGCTTTGTCAA..........................................................................................................................................221116.0011611400020
..................................................................................AGCCTCTACTAGGCTTTGTCTA..........................................................................................................................................221102.001029900030
.................................................................................................................................ATAGCCTATGAGAGGTTAGG.............................................................................................201100.0010083101150
.................................................................................TAGCCTCTACTAGGCTTTGTAAA..........................................................................................................................................23199.00999600120
................................................................................................................................CATAGCCTATGAGAGGTTAG..............................................................................................20192.00929200000
................................................................................CTAGCCTCTACTAGGCTTTGTCA...........................................................................................................................................23191.009110800730
.................................................................................TAGCCTCTACTAGGCTTTGTCAT..........................................................................................................................................23186.008618200660
..................................................................................AGCCTCTACTAGGCTTTGTCC...........................................................................................................................................21181.00814000770
....................................................................................CCTCTACTAGGCTTTGTCT...........................................................................................................................................19179.00796700480
.................................................................................TAGCCTCTACTAGGCTTTGC.............................................................................................................................................20178.00780000762
.................................................................................TAGCCTCTACTAGGCTTTGTCTCCC........................................................................................................................................25177.00777201121
.................................................................................TAGCCTCTACTAGGCTTTGTCTTC.........................................................................................................................................24177.007740100351
...............................................................................TCTAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................24174.00740100721
.................................................................................TAGCCTCTACTAGGCTTTGTCAC..........................................................................................................................................23174.007422200500
.................................................................................TAGCCTCTACTAGGCTTTGTCAAA.........................................................................................................................................24163.00635500080
..................................................................................AGCCTCTACTAGGCTTTGTCTGT.........................................................................................................................................23161.006126003320
................................................................................CTAGCCTCTACTAGGCTTTGTC............................................................................................................................................22161.00614000570
..................................................................................AGCCTCTACTAGGCTTTGTCTT..........................................................................................................................................22156.00564800080
.................................................................................TAGCCTCTACTAGGCTTTGTA............................................................................................................................................21154.005438000160
.................................................................................TAGCCTCTACTAGGCTTTGTCTAAA........................................................................................................................................25146.00464410010
.................................................................................TAGCCTCTACTAGGCTTTGTCTGT.........................................................................................................................................24146.004631200121
..............................................................................ATCTAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................25144.00441000430
...............................................................................................................................ACATAGCCTATGAGAGGTTAGA.............................................................................................22141.00412656022
...................................................................................GCCTCTACTAGGCTTTGTCA...........................................................................................................................................20140.00403460000
...............................................................................................................................ACATAGCCTATGAGAGGTTAGC.............................................................................................22136.00366004224
...................................................................................GCCTCTACTAGGCTTTGTCTG..........................................................................................................................................21135.00353500000
...................................................................................GCCTCTACTAGGCTTTGTCTC..........................................................................................................................................21131.00313100000
................................................................................CTAGCCTCTACTAGGCTTTGTCTC..........................................................................................................................................24131.00315000260
...............................................................................................................................ACATAGCCTATGAGAGGT.................................................................................................18131.003110061221
...............................................................................................................................ACATAGCCTATGAGAGGTTAGGAA...........................................................................................24131.00312420140
...............................................................................................................................ACATAGCCTATGAGAGGTTAGGTT...........................................................................................24129.00291601363
..................................................................................AGCCTCTACTAGGCTTTGTCTCC.........................................................................................................................................23125.00252400010
.................................................................................TAGCCTCTACTAGGCTTTGTCTCA.........................................................................................................................................24124.00242200020
..............................................................................ATCTAGCCTCTACTAGGCTTTGTCC...........................................................................................................................................25120.00200000200
..................................................................................AGCCTCTACTAGGCTTTGTCTAA.........................................................................................................................................23120.00201910000
...............................................................................................................................ACATAGCCTATGAGAGGTTAGGTC...........................................................................................24119.0019801253
.................................................................................TAGCCTCTACTAGGCTTTGTCTAC.........................................................................................................................................24118.00183000150
...............................................................................................................................ACATAGCCTATGAGAGGTTAGGAAA..........................................................................................25117.00171400030
..................................................................................AGCCTCTACTAGGCTTTGT.............................................................................................................................................19117.00171700000
...............................................................................TCTAGCCTCTACTAGGCTTTGTCC...........................................................................................................................................24117.00170000170
.......................................................................................................GTGCA--TTTGATAT-AAGATCAG...................................................................................................................21116.0016281023
..............................................................................................................................GACATAGCCTATGAGAGGTT................................................................................................20115.0015202128
.................................................................................TAGCCTCTACTAGGCTTTGTCCC..........................................................................................................................................23115.00151200030
.................................................................................TAGCCTCTACTAGGCTTTGTCTCCT........................................................................................................................................25115.00151500000
.................................................................................TAGCCTCTACTAGGCTTTGTT............................................................................................................................................21115.00153100101
...................................................................................GCCTCTACTAGGCTTTGTC............................................................................................................................................19113.00131300000
..................................................................................AGCCTCTACTAGGCTTTGTCTGC.........................................................................................................................................23113.00133000100
.................................................................................................................................ATAGCCTATGAGAGGTTAG..............................................................................................19113.00131010011
..............................................................................................................................GACATAGCCTATGAGAGGTTAGGT............................................................................................24113.0013230062
.................................................................................TAGCCTCTACTAGGCTTTGTCTGG.........................................................................................................................................24113.00131300000
.....................................................................................CTCTACTAGGCTTTGTCA...........................................................................................................................................18112.0012570000
.....................................................................................CTCTACTAGGCTTTGTCTC..........................................................................................................................................19112.00121100010
................................................................................................................................CATAGCCTATGAGAGGTTAGGT............................................................................................22112.00121100010
.................................................................................TAGCCTCTACTAGGCTTTGTCTGC.........................................................................................................................................24112.0012810030
.................................................................................TAGCCTCTACTAGGCTTTGTTA...........................................................................................................................................22112.0012350031
..................................................................................AGCCTCTACTAGGCTTTGTAA...........................................................................................................................................21112.00121200000
.................................................................................TAGCCTCTACTAGGCTTTGTTC...........................................................................................................................................22112.00121000110
..................................................................................................................................TAGCCTATGAGAGGTTAGG.............................................................................................19112.0012800031
.................................................................................TAGCCTCTACTAGGCTTTGTAG...........................................................................................................................................22112.00121200000
droGri2
TGAT--AAATAGTAAAGAC--AGACAAAAGC-T----GGCAGTCTCAAATG--G-----------AA-TTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCACTTTTTCAAT-TCAATCAGACATAGCCTATGAGAGGTTAGGTGTACAAATGGATCAAAGCAACA-A--------------------------------------------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.................................................................................TAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................221110664.001106641071823482
..................................................................................AGCCTCTACTAGGCTTTGTCT...........................................................................................................................................2119191.00919191892
...............................................................................................................................ACATAGCCTATGAGAGGTTAGG.............................................................................................2218970.0089708493477
.................................................................................TAGCCTCTACTAGGCTTTGTC............................................................................................................................................2114164.0041643768396
.................................................................................TAGCCTCTACTAGGCTTTGT.............................................................................................................................................2011154.001154884270
.................................................................................TAGCCTCTACTAGGCTTTGTCTT..........................................................................................................................................231864.008648622
................................................................................................................................CATAGCCTATGAGAGGTTAGG.............................................................................................211768.007687671
...............................................................................................................................ACATAGCCTATGAGAGGTTAG..............................................................................................211702.00702482220
...................................................................................GCCTCTACTAGGCTTTGTCT...........................................................................................................................................201369.003693690
..................................................................................AGCCTCTACTAGGCTTTGTC............................................................................................................................................201334.003343340
................................................................................CTAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................231291.002912901
.................................................................................TAGCCTCTACTAGGCTTTGTCTG..........................................................................................................................................231287.002872834
...............................................................................................................................ACATAGCCTATGAGAGGTT................................................................................................191163.0016310162
.................................................................................TAGCCTCTACTAGGCTTTGTCA...........................................................................................................................................221158.0015814315
.....................................................................................CTCTACTAGGCTTTGTCT...........................................................................................................................................181113.001131130
..............................................................................................................................GACATAGCCTATGAGAGGTTAGG.............................................................................................231104.00104968
...............................................................................................................................ACATAGCCTATGAGAGGTTAGGT............................................................................................23192.00926527
..................................................................................AGCCTCTACTAGGCTTTGTCTG..........................................................................................................................................22185.0085850
.................................................................................................................................ATAGCCTATGAGAGGTTAGG.............................................................................................20179.0079772
..................................................................................AGCCTCTACTAGGCTTTGT.............................................................................................................................................19163.0063630
..................................................................................AGCCTCTACTAGGCTTTGTCTT..........................................................................................................................................22162.0062620
...............................................................................................................................ACATAGCCTATGAGAGGTTA...............................................................................................20158.00583919
.................................................................................TAGCCTCTACTAGGCTTTGTCTA..........................................................................................................................................23142.0042420
....................................................................................CCTCTACTAGGCTTTGTCT...........................................................................................................................................19140.0040400
.................................................................................TAGCCTCTACTAGGCTTTGTT............................................................................................................................................21140.0040391
..............................................................................................................................GACATAGCCTATGAGAGGTTAG..............................................................................................22136.0036315
................................................................................................................................CATAGCCTATGAGAGGTTAG..............................................................................................20134.0034340
.................................................................................TAGCCTCTACTAGGCTTTGTCTTG.........................................................................................................................................24134.0034340
.................................................................................TAGCCTCTACTAGGCTTTGTCTC..........................................................................................................................................23131.0031301
...............................................................................................................................ACATAGCCTATGAGAGGTTAGGA............................................................................................23128.0028271
.................................................................................TAGCCTCTACTAGGCTTTGTCC...........................................................................................................................................22126.0026233
...............................................................................................................................ACATAGCCTATGAGAGGTTAGT.............................................................................................22121.0021615
.................................................................................TAGCCTCTACTAGGCTTTG..............................................................................................................................................19121.0021210
..................................................................................................................................TAGCCTATGAGAGGTTAGG.............................................................................................19118.0018180
.................................................................................TAGCCTCTACTAGGCTTTGTCTGG.........................................................................................................................................24118.0018180
.................................................................................TAGCCTCTACTAGGCTTTGTCG...........................................................................................................................................22117.0017107
...................................................................................GCCTCTACTAGGCTTTGTC............................................................................................................................................19116.0016160
..................................................................................AGCCTCTACTAGGCTTTGTCA...........................................................................................................................................21115.0015150
.................................................................................TAGCCTCTACTAGGCTTTGTCTGT.........................................................................................................................................24113.0013121
...............................................................................................................................ACATAGCCTATGAGAGGTTAGGG............................................................................................23111.0011110
...............................................................................................................................ACATAGCCTATGAGAGGTTAGGC............................................................................................2318.00880
................................................................................CTAGCCTCTACTAGGCTTTGTC............................................................................................................................................2218.00880
.................................................................................TAGCCTCTACTAGGCTTTGTCTCC.........................................................................................................................................2417.00770
...............................................................................................................................ACATAGCCTATGAGAGGTTAGGTT...........................................................................................2417.00761
.................................................................................TAGCCTCTACTAGGCTTTGTA............................................................................................................................................2116.00642
...............................................................................................................................ACATAGCCTATGAGAGGT.................................................................................................1816.00660
.................................................................................................................................ATAGCCTATGAGAGGTTAG..............................................................................................1916.00651
.................................................................................TAGCCTCTACTAGGCTTTGTCTGGC........................................................................................................................................2516.00660
.................................................................................TAGCCTCTACTAGGCTTTGTCTGTA........................................................................................................................................2515.00550
.................................................................................TAGCCTCTACTAGGCTTTGTCTTA.........................................................................................................................................2415.00550
..............................................................................................................................GACATAGCCTATGAGAGGTTA...............................................................................................2115.00532
...................................................................................................................................AGCCTATGAGAGGTTAGG.............................................................................................1815.00550
..............................................................................................................................GACATAGCCTATGAGAGGTT................................................................................................2015.00532
.................................................................................TAGCCTCTACTAGGCTTTGTCTAA.........................................................................................................................................2415.00550
...............................................................................TCTAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................2415.00550
..................................................................................AGCCTCTACTAGGCTTTGTCTTG.........................................................................................................................................2315.00550
................................................................................CTAGCCTCTACTAGGCTTTGTCTT..........................................................................................................................................2414.00440
..................................................................................AGCCTCTACTAGGCTTTGTCTGT.........................................................................................................................................2314.00440
...................................................................................GCCTCTACTAGGCTTTGT.............................................................................................................................................1814.00440
...................................................................................GCCTCTACTAGGCTTTGTCTG..........................................................................................................................................2114.00440
.................................................................................TAGCCTCTACTAGGCTTTGTCAT..........................................................................................................................................2314.00440
.................................................................................TAGCCTCTACTAGGCTTTGTCTGGCA.......................................................................................................................................2614.00440
................................................................................CTAGCCTCTACTAGGCTTTGT.............................................................................................................................................2114.00440
................................................................................................................................CATAGCCTATGAGAGGTTAGGT............................................................................................2213.00330
.................................................................................TAGCCTCTACTAGGCTTTGTTG...........................................................................................................................................2213.00330
...............................................................................................................................ACATAGCCTATGAGAGGTTAGA.............................................................................................2213.00321
.................................................................................TAGCCTCTACTAGGCTTTGTCTGC.........................................................................................................................................2413.00330
..................................................................................AGCCTCTACTAGGCTTTGTCTGG.........................................................................................................................................2313.00330
.............................................................................................................................AGACATAGCCTATGAGAGGTTAG..............................................................................................2313.00330
.................................................................................TAGCCTCTACTAGGCTTTGTCTTC.........................................................................................................................................2413.00330
................................................................................................................................CATAGCCTATGAGAGGTTA...............................................................................................1913.00330
................................................................................................................................CATAGCCTATGAGAGGTT................................................................................................1813.00330
....................................................................................CCTCTACTAGGCTTTGTC............................................................................................................................................1812.00211
...............................................................................................................................ACATAGCCTATGAGAGGTTAGGAC...........................................................................................2412.00220
.................................................................................TAGCCTCTACTAGGCTTTGTCATG.........................................................................................................................................2412.00220
...............................................................................................................................ACATAGCCTATGAGAGGTTT...............................................................................................2012.00211
..............................................................................................................................GACATAGCCTATGAGAGGT.................................................................................................1912.00211
..............................................................................................................................GACATAGCCTATGAGAGGTTAGT.............................................................................................2312.00220
.......................................................................................................GTGCACTTTTTCAAT-TCAATCAG...................................................................................................................2312.00220
...............................................................................................................................ACATAGCCTATGAGAGGTTAT..............................................................................................2112.00211
...................................................................................GCCTCTACTAGGCTTTGTCTT..........................................................................................................................................2112.00220
.................................................................................TAGCCTCTACTAGGCTTTGC.............................................................................................................................................2012.00211
................................................................................................................................CATAGCCTATGAGAGGTTAGGC............................................................................................2212.00220
...............................................................................................................................ACATAGCCTATGAGAGGTCT...............................................................................................2012.00202
..................................................................................AGCCTCTACTAGGCTTTGTCTGTAT.......................................................................................................................................2512.00220
.................................................................................TAGCCTCTACTAGGCTTTGTCTGTAT.......................................................................................................................................2612.00220
...............................................................................................................................ACATAGCCTATGAGAGGTTAGGGTA..........................................................................................2512.00220
..................................................................................AGCCTCTACTAGGCTTTGTCTA..........................................................................................................................................2212.00220
.................................................................................TAGCCTCTACTAGGCTTTGTCTGCA........................................................................................................................................2512.00220
..................................................................................AGCCTCTACTAGGCTTTGTT............................................................................................................................................2012.00220
.....................................................................................CTCTACTAGGCTTTGTCTG..........................................................................................................................................1912.00220
.................................................................................................................................ATAGCCTATGAGAGGTTAGT.............................................................................................2012.00211
.................................................................................TAGCCTCTACTAGGCTTTGTCTTGT........................................................................................................................................2512.00220
...............................................................................................................................ACATAGCCTATGAGAGGTTACAG............................................................................................2311.00101
.................................................................................TAGCCTCTACTAGGCTTTGTCAA..........................................................................................................................................2311.00110
.................................................................................TAGCCTCTACTAGGCTTTGTCTGAAG.......................................................................................................................................2611.00110
...........................................................................................................................TCAGACATAGCCTATGAGAGGT.................................................................................................2211.00110
...................................................................................GCCTCTACTAGGCTTTGTCTA..........................................................................................................................................2111.00110
droAna3
ACGT----GTGGGCGTGGC--C------ATGCTCTATGGCCGTTCTAATTC--GAAAATCG-AAAAT-TTCCTTATAGATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAAAG-TCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGACAAGACATCA-C-----------AAAAACGGATTGAAGATTACAGTTA-------------------------------CSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.................................................................................TAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................22144256.004425618128156571249673611771309
.................................................................................TAGCCTCTACTAGGCTTTGTCA...........................................................................................................................................2218141.008141501467129094398
.................................................................................TAGCCTCTACTAGGCTTTGTCC...........................................................................................................................................2215230.005230285138491500
.................................................................................TAGCCTCTACTAGGCTTTGTC............................................................................................................................................2114745.00474551735872244615320
...............................................................................................................................ACATAGCCTATAAGAGGTTAGG.............................................................................................2212668.002668600409408370169712
..................................................................................AGCCTCTACTAGGCTTTGTCT...........................................................................................................................................2111560.0015601525253700
.................................................................................TAGCCTCTACTAGGCTTTGTCTG..........................................................................................................................................2311077.0010771047211269
.................................................................................TAGCCTCTACTAGGCTTTGTCTT..........................................................................................................................................231574.005744915511935
..................................................................................AGCCTCTACTAGGCTTTGTCTG..........................................................................................................................................221542.00542514240112
...............................................................................................................................ACATAGCCTATAAGAGGTTAG..............................................................................................211367.003673434281139167
.................................................................................TAGCCTCTACTAGGCTTTGTCAA..........................................................................................................................................231353.00353433009100
...................................................................................GCCTCTACTAGGCTTTGTCT...........................................................................................................................................201271.0027126610400
.................................................................................TAGCCTCTACTAGGCTTTGT.............................................................................................................................................201237.0023735332549914
.................................................................................TAGCCTCTACTAGGCTTTGTCTA..........................................................................................................................................231225.0022510910113011
................................................................................CTAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................231169.00169301271803
...............................................................................................................................ACATAGCCTATAAGAGGTTAGT.............................................................................................221156.001563610284366
.................................................................................TAGCCTCTACTAGGCTTTGTCG...........................................................................................................................................221120.00120561934740
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGT............................................................................................23197.00979156171139
....................................................................................CCTCTACTAGGCTTTGTCT...........................................................................................................................................19163.00635811102
................................................................................................................................CATAGCCTATAAGAGGTTAGG.............................................................................................21161.00615630002
..................................................................................AGCCTCTACTAGGCTTTGTCTGT.........................................................................................................................................23160.006030211206
..................................................................................AGCCTCTACTAGGCTTTGTC............................................................................................................................................20154.00544950000
..................................................................................AGCCTCTACTAGGCTTTGTCA...........................................................................................................................................21154.00544724100
...............................................................................................................................ACATAGCCTATAAGAGGTT................................................................................................19153.005313217030
................................................................................CTAGCCTCTACTAGGCTTTGTCC...........................................................................................................................................23142.00420411000
..................................................................................AGCCTCTACTAGGCTTTGTCTT..........................................................................................................................................22142.00424200000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGT.........................................................................................................................................24140.00402860222
...................................................................................GCCTCTACTAGGCTTTGTCTG..........................................................................................................................................21140.00404000000
...............................................................................................................................ACATAGCCTATAAGAGGTTA...............................................................................................20140.00400367222
................................................................................CTAGCCTCTACTAGGCTTTGTCA...........................................................................................................................................23134.00341303000
..............................................................................................................................GACATAGCCTATAAGAGGTTAGG.............................................................................................23133.00338513412
.....................................................................................CTCTACTAGGCTTTGTCT...........................................................................................................................................18132.00322251301
.................................................................................TAGCCTCTACTAGGCTTTGTCAT..........................................................................................................................................23128.00282260000
.................................................................................TAGCCTCTACTAGGCTTTGTCTAA.........................................................................................................................................24123.00239113000
.................................................................................TAGCCTCTACTAGGCTTTGTCAC..........................................................................................................................................23121.00210165000
.............................................................................GATCTAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................26118.00180180000
..............................................................................................................................GACATAGCCTATAAGAGGTTAG..............................................................................................22115.00151010211
.......................................................................................................GTGCA--TTCGAAAG-TCGATCAG...................................................................................................................21115.0015322044
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGA............................................................................................23115.0015370203
.................................................................................TAGCCTCTACTAGGCTTTGTCTC..........................................................................................................................................23112.0012181200
.................................................................................TAGCCTCTACTAGGCTTTG..............................................................................................................................................19112.00121200000
...............................................................................TCTAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................24112.00120120000
................................................................................CTAGCCTCTACTAGGCTTTGTC............................................................................................................................................22112.00120120000
.................................................................................TAGCCTCTACTAGGCTTTGTCAAA.........................................................................................................................................24111.0011272000
.................................................................................TAGCCTCTACTAGGCTTTGC.............................................................................................................................................20111.00110100010
..................................................................................AGCCTCTACTAGGCTTTGTCTA..........................................................................................................................................22110.0010910000
.................................................................................TAGCCTCTACTAGGCTTTGTA............................................................................................................................................21110.0010440110
.................................................................................TAGCCTCTACTAGGCTTTGTTA...........................................................................................................................................2219.009135000
..................................................................................AGCCTCTACTAGGCTTTGTCC...........................................................................................................................................2119.009090000
..................................................................................AGCCTCTACTAGGCTTTGTCTGC.........................................................................................................................................2319.009270000
..............................................................................ATCTAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................2519.009080100
.................................................................................TAGCCTCTACTAGGCTTTGTGA...........................................................................................................................................2218.008052010
.................................................................................TAGCCTCTACTAGGCTTTGTCTGC.........................................................................................................................................2418.008260000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGC.............................................................................................2218.008062000
.............................................................................GATCTAGCCTCTACTAGGCTTTGTCC...........................................................................................................................................2618.008080000
.................................................................................TAGCCTCTACTAGGCTTTGTAA...........................................................................................................................................2218.008242000
....................................................................................CCTCTACTAGGCTTTGTCTG..........................................................................................................................................2017.007700000
..............................................................................................................................GACATAGCCTATAAGAGGTT................................................................................................2017.007000124
.................................................................................TAGCCTCTACTAGGCTTTGTCTAG.........................................................................................................................................2417.007160000
.................................................................................TAGCCTCTACTAGGCTTTGTCCA..........................................................................................................................................2317.007133000
..................................................................................AGCCTCTACTAGGCTTTGTCTGA.........................................................................................................................................2316.006420000
.................................................................................................................................ATAGCCTATAAGAGGTTAGG.............................................................................................2016.006400101
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGAA...........................................................................................2416.006132000
.............................................................................GATCTAGCCTCTACTAGGCTTTGTCA...........................................................................................................................................2616.006060000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGA.........................................................................................................................................2416.006510000
.................................................................................TAGCCTCTACTAGGCTTTGTCTAAA........................................................................................................................................2516.006330000
...................................................................................GCCTCTACTAGGCTTTGTCA...........................................................................................................................................2016.006302100
.................................................................................TAGCCTCTACTAGGCTTTGTGC...........................................................................................................................................2215.005050000
..................................................................................AGCCTCTACTAGGCTTTGTCAA..........................................................................................................................................2215.005500000
.................................................................................TAGCCTCTACTAGGCTTTGTT............................................................................................................................................2115.005021110
...................................................................................GCCTCTACTAGGCTTTGTCTGT.........................................................................................................................................2215.005500000
...................................................................................GCCTCTACTAGGCTTTGTC............................................................................................................................................1915.005500000
...............................................................................TCTAGCCTCTACTAGGCTTTGTCA...........................................................................................................................................2414.004040000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGTT........................................................................................................................................2514.004310000
...............................................................................TCTAGCCTCTACTAGGCTTTGTC............................................................................................................................................2314.004030100
droBip1
T-------GTGGGCGTGGCAAT------ATGCTCTA----CGTTCTAAATC--GA--------AAAT-TTCCTTATAGATCTAGCCTCTACTAGGCTTTGTCTGTGTT--TTC--------GATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCAAA-AGTCATCA-T-----------TAAAACGGATTGACGATTACAGTTACC-AA-------------------------ATSizeHit CountTotal NormTotal
No Reads
droKik1
TC--------------------------------------CGTTCTGAATC-CGA--------GAAT-TTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAAAT-CCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCAAATGTGCAGCGAA-------------AGGCGGAA-----------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
----------------------------------------------------------------------CCTTTTAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAAAG-CCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGAAAGAGCAGCG-A-------------AGAGGGCGC--CGATTACAGTTTGGCCC-------------------------CCSizeHit CountTotal NormTotal
No Reads
droEle1
CCAGATGA-----------------ACAATACT----TACTGTTCTAACTC--AA--------GAAT-TTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAAAA-CCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGAAAAAGCATCA-A-------------AAACGGCAT--CAATTACGGTTA--------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
----------------------------------------------------------------------CCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAAAA-CCGATCAGACATAGCCTATAAGAGGTTAGGTGTACAAAGGCGAAAAATCAGCA-A-------------AAACGGACT--CGATTACGGTT---------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
----------------------------------------------------------------------CCTTTTAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAAA--CCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGAAAAATCATCG-G-------------AATCGGAAC--CGTTTACAGTTT--------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TT------------------------------------------CTAAATC--GAGAATCTGCAATC-TACCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAAAA-TCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGAAAAATCATCAGA-------------AAACGGAAT--CGATTACAGTTTTT-----GGG--------------------AASizeHit CountTotal NormTotal
No Reads
droEug1
----------------------------------------------------------------------CCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCTAAAG-CCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCAAAAAGTCAGCA-A-------------AAACGGAAT--CGATTACAGTTTTT-TT-------------------------ACSizeHit CountTotal NormTotal
No Reads
dm3
----------------------------------------------------------------------CCTTCTAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAAAG-CCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGAACAATCAGCG-A-------------AAACGGAAT--CGATTACAGTTT--------------------------------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.................................................................................TAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................2215000844.00500084400001677825942975405954107945192103182502596358940338482110034941656149226827541215174193007991121017024957614123445712574373505159586314511811884372617101355355900000109372300000000000000000207332069017160126524145485278213152053496799491434429946521844550635894212177022522300293939348520713434302120999992013456559348061620850627681842251718065123541385243115304632218931622701692137233331111068113814718188318854411367132771080508916379918819782983327860278361490255236392993161142832155888533653523057404871593219903072713416233031651622443672709624283193388225011934600258144113062724265618460250137981519751540000002365353731196010820376793606881491391471181678123272951264651137182611741148901162832757225979134185529742644315900178313338944080190662842178205823454415649406039131750830719258401762710219366448368626541127135641681454185256141110295125331122237228048937548552223294807342425489248314776269922858288620472137276774259823785387546658748132419898835828584538792061640050980148842564812088415727267510649648152024377378464874551010771902274242416794520159823212073579953394029989888100551753021667182
...............................................................................................................................ACATAGCCTATAAGAGGTTAGG.............................................................................................221694498.0069449810003794827107201902306030881421336002232461611178163120181302577542633312941571628113815041094819159010436481648169037717749581337998156616261895827398710201380000000000000000064397338503778823376810826031010491131928303081676611547668243773907108216607130091302611598139332802131291941366711257914118799673125964950240297318425890023357693611370395727261816712064141402638445007091482396834232979290525811194108012428547866101119188141436413831520570445401014150220827951551293183569834087433167134578482453721173346464828383616757518539521351371594242455300000400952101014300244718431286401526564503618092071406120698939228208105781765847916967853700001269747710884573642159749145062719091285526800991269710499795117094009155123751132631070971604288112362372392039221452101420451347099259451995141611923132041574162627713730063272443076046371493231751572632890108895472039989908772124096140252617242625831635351632821014616794009481203875818610381391204832332231056314027194402458339
.................................................................................TAGCCTCTACTAGGCTTTGTC............................................................................................................................................211191937.001919370000911283340392080390003100329258305184605140210191981991107902511638770213447714684413269411411613352101921254646373352000110000000000000000002070203117991006166221941671705496427532967514062639718052184376145806484719617108370031751444338535545971911055394811122134035153501442487151308263104251225111577981472458729325722384105072788202372184122132101172457624147149938242102413219922120210131151818235651677072916954761744103513861100362022320200000126203004000143912556394856502311536332078874183446216935648343469169451531149930025418416420977148731112426011089674040188522101465107728106216131010183262822653646188333991659149238503419148234540222191273419166546193682168174094558669107178512652302672348513583510320202235144604377261219778592894319703833651256183211948843049923356603315720
.................................................................................TAGCCTCTACTAGGCTTTGTCA...........................................................................................................................................221116273.00116273000062955974191528170000001071313212002500000001825899116371814492362352167024624333489172716144913791321840000000000000000000000041374527476444414223219413111591130774111001710106951624739346017122724215337202118301423070971006328225317610070135878748154632792799241329139328261551522052792131010038211718411528300310061214040130912334038791990498687013505860000024164000010043582135881206569512979170410871399153231082765110891540093810002601483263183831063351261543178936004272232371517234199397823291122237163112862731441471190691523497267116202776591318337117209721342846129142132006094147144590888898335717072175676490051192334395318810104731338690
.................................................................................TAGCCTCTACTAGGCTTTGT.............................................................................................................................................20199916.009991600002371938152142333303000001065276369012204107099105042066641801985281373301075701117619357311457104170890001310000000000000000056805570462830033264922230238465795430420336269262292338184229446662022178142364112188112305012249091205551772882082482402150208400831348612065081840002121064041261092920514945145562381832663113651200316757011410653102228193016140781111179576410711211718265021485183384524900510635900000386800000045139819113251524416253716114721626407473160000109821212415472712432537251613144194508358211330547825657414673080039748220918656328928934562419422017638428462761681221199393480982361025654511319466045161133193408984137113041631210254244721060
...............................................................................................................................ACATAGCCTATAAGAGGTTAG..............................................................................................21192129.009212900002181413233524352501146006611951177414711839327213401811529610872101122112220814410569118102305254112735000114600000000000000000362041162821431834236516512730638217540617212567517921632616835751012362366440367345285781491250691729894632403290900001000403015030210112740665476979024638858133239947212313221779000217651562574741521987151403012105138332437910712225274544240142918167251183111420616257300100126262301330051139825849134426821330205367344493577119054124606000055609434372303114010143939213435100424861362381441256635837316771313824647556726413243527362631542371291327318675605986239147311812213114019390182120363433121050812872988212146122666062992341087545734143195916223559182413348209054441633383733305960
...............................................................................................................................ACATAGCCTATAAGAGGTTAGT.............................................................................................22155744.005574400000011001002001220055526009920000000000656229357040425854185639154370854758500000000000000000000001391731101870141012916480111805711200285117182153793416122061915300001301021001000000122821416769576615019014416372587867410000078193391828272613405784617622910676955117124226413370001136500000254800000013714410514667212510454500032299129192152000010227816161602285241155301312261134733569133632425718228621662166055351188421489241411008182117616212440830172398558472036151241429110091033929164653236219502911628431224484386020192511979251142728927265140383582371171393160
.................................................................................TAGCCTCTACTAGGCTTTGTCTA..........................................................................................................................................23150546.005054600001015910101100010054836501200000001927420748219242055413118240224010623771176310000000000000000000000023271512012431146384501271312683001613161556722244320541223750540100030421500015161399036114129374810920421220114133940965100000818143110911052084131611730081033113203741300010550000043121000000101258119320750216151418151940512484669913190500512100011032095300167030120581512106983141573134106982650103926108849200081112100010316148453173000045128153115111100100020000539850215628
.................................................................................TAGCCTCTACTAGGCTTTGTCTG..........................................................................................................................................23135156.0035156000010000083146000900267116150394120201210252704533681667886215562210969127881413000073100000000000000000106128866713400126553133170219150127002553932606048987526582150238100261003016917317140100211219164510250361153991585672212739251111067114261491845680460149150232211432002411514114618457143002015250000039350000005927342853343447376811427892139139311113368395815811131000041042210737516765253141120704438133147391511711123774293119148489466778774682565181018351208891335810422811812101581348197258421264290415260248910582325108733821336635150194312741101127915
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGT............................................................................................23118585.00185850000230200301170032005815001596930000002876392891593311964318649454273836640000542000000000000000001681971242100161182226652854121978171729826009920170613668910722098511238803439012121041505023000001120011119416608671461269111192295125270010062142012510278513503579304224333941941063254217675861724101518001162725000004957001000203154881661374223252093616321191832333960000762832151296420534163961162129584120977112748356118122641057215182157135804935228186673966238311718832514520244137371313568513139225647627126744741631541353374323133642938181314139620732132294957017336818
.................................................................................TAGCCTCTACTAGGCTTTGTCTAA.........................................................................................................................................24117007.00170070000112040000000000002140000000000000205605192231191460311732024100000000000000000000000534601275911325000002000127000801602121022374100282014400000000101000000033220053243371293422268191623700000200010320301020202010120120001180147000005000001160000000021332024533899047191541684208460240001000011050000001010000000001001001020001812715607127137810000000050001018571121000000211524200000000000002810000000
.................................................................................TAGCCTCTACTAGGCTTTGTCAA..........................................................................................................................................23116216.001621600000134160000000000003177000000000002182210161551546160884174200000000000000000000000560102211031222727100001101612100219033185287018060404690000000000100000003602002661781922375509223147000000600000000000000100000000000073115200210500000519000000000323301813367820477158110771741481220002000230400000000200000002100011001100026211251051214265601001000016000012363518000000212218100000000000003001000010
..................................................................................AGCCTCTACTAGGCTTTGTCT...........................................................................................................................................21112181.00121810000000000002000000032710030100000073112217124378439136650946500010000000000000000000577453790311414212111152616591021411032610924957151010310240601040701015900000371801529260916203594235213380000040391920420235185013610357514116628410330001253272600020200000005000000141124175261212874475265244604581101238139003000003122278166724151131557432515776316523103155286228381196038973621342843315820711012341011511553260300114285804101511050000022311622016
.................................................................................TAGCCTCTACTAGGCTTTG..............................................................................................................................................19111830.001183000000000000000000000000200000000006000000010000000001000000000000000000000001159112610466363129155743631095631195211312432296910107154491025597638492532153191118211134900000000000811302303100001121101000032000030123500100181907001627122030840112003410010000000000000700000001012112683973139305133002533000350000000000000000000001000100100010000000000100000000000000000000000000000000100000000000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTT..........................................................................................................................................23110861.00108610000000000103300015009457001500000000211299415210373761318990000000000000000000000011910099791610074541381011135268009083204023241523252206311650234020221002301626001000007014800311914621032100110365150625615259081014519519019362202200010113811000700000000380000002172913814995651831378047950280515621371010142002036611023931612953032026192244162392210407522104463610895571711421302131741195011241040023901419140400132113125100031418002001000849222249
.................................................................................TAGCCTCTACTAGGCTTTGTCTAAA........................................................................................................................................25110153.00101530000014600000000000022000000000000011612050306112311000000000000000000000000211103220521330000020002110000300104130508206300000000000000000001018005500136620013000000000000020000000000000000000030200200000000011000000000500018621776283371079369157935910000000000000000000000000000000000000000001211101232700000000000000041345000000552000000000000000000000000
..............................................................................................................................GACATAGCCTATAAGAGGTTAGG.............................................................................................2318426.008426000010101041100020300021110427119445171108187712137111661685911141911000010000000000000000001414171614070927943161590102417540079144603218129220151301210515271101013100513200000000201730268716353135204012681700000190177680391702439125235681020657174817241451633582000206400000112001000484331354523211417200122743752200000022124623866252071918562124122901640151221163629161741301473620917100462123920719812445132539543022137421135242138262203443616281035388212531191188011512561400
..................................................................................AGCCTCTACTAGGCTTTGTCTG..........................................................................................................................................2217615.0076150000001000314200000012320000200000027323555616076649000000100000000000000000921227910101515119931276441876550060127401990148177304004100540100060101000018430002960012542310000010045081003727019001111210216020001500794112000100900000030000003101182186632555510424453987808932401230000012211513601511331503346141911951137222410801130125473992001003271010051311150000193713179204010511160000100006121710
.................................................................................TAGCCTCTACTAGGCTTTGTCC...........................................................................................................................................2216577.006577000020740017611500040022420006000000005401021211155984741514757673260000000000000000000000011994519437132304001033257520007486311925727582615052018161650101210814600100000102017343222685184113047300000612184304161801700161301061900112006512432300011021000005800000018441191511615100352514331511164533202170000624651432911269782193876624107311043732910817748642032786328649243756463518228329732218158100148732350902710985531120291845000013011102028270
...................................................................................GCCTCTACTAGGCTTTGTCT...........................................................................................................................................2015414.0054140000000000100000001000032200000000000184495217422313719320000000000000000000000088613235762526689543311412924151712012132911328266380953343341310028210210101010506400000000006370043851391001000009091052129080044030608000400192152300020010000003000000221171052298971034895127293537000100001013132421500102618211211931926442671329101742271341406141885003101010132003180100010000010002011030000000010042008
..............................................................................................................................GACATAGCCTATAAGAGGTTAG..............................................................................................2214941.004941000000000010310005005549024900000001872573121310044232111119000011000000000000000004202060004718731122323004910914292654009111601008600000000000022000000000017132401123024251931136510000046308489292110310350202272815201001061541100511000000111500000041301945371119003600034704510000001433175276005339168917341016643434739152651513212482482319643294282076216131111396311310125340241138175142445217110252070158324616732215114236381041270
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................................................................................CTAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................2313942.003942000000000000000000002690002000000006249928202988531089155085690000000000000000000000045354637000000000000000000000000000000000000100000000010000000000003101800141016924214571000006170015037040008040104000000081736000202000000020000001741011678123579273828822240560030000031939224808487215206440270458740781611214437593230109463277120642321514300410010210150113112100019812449003090102000010010181633240
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................................................................................................................................CATAGCCTATAAGAGGTTAGG.............................................................................................2113507.00350700000001003140036621000174052314662312220212213041020202320000000000000000000000002729202203624613112014894477600070864091172221513231440551115130031000030101112007456302212567752062002729240453253018015321632283382987106070658001070000040000002020000211311104000014261011841717430000116220738000220461208144571012599820175473621695617431331011200102015051033021081957200333002041308001000000632380
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGA............................................................................................2313252.003252000001101010230013002200001600000000152112491115418113200000000000000000000000539634692120324218254672473370037640049359533181010021092006000000103000101002210181019004109646409100000187114001934012109161801773418560020181000011000000094000000157610142264561235011047954791560020132521411011336720616461621813916261725125462196408291113105515604111109230703002857818270020062013001212001479250
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.................................................................................TAGCCTCTACTAGGCTTTGTA............................................................................................................................................211880.0088000000062002123000100201400100000000040190692110001446600100000000000000000000000886203540013202170102620019110034793703008002501000000002003101100020041301311240002000000010210210100021001000001001052200000020000001000000120017010255664350001010010021706000003313230471205616941013200000010022012900002000003300020000110000001010000000000000000
..................................................................................AGCCTCTACTAGGCTTTGTCTGT.........................................................................................................................................231842.008420000000000010000000000000030100000001100010112110002000001000000000000000000787811000032109011014006130014844347021006010010001000000000000000003041002022400000000120000240500130214060002001121000000000000000000000000002003594960182230331900130000011004082022100101101000412212121573141429328120650021011100001121200201130341912002010300100011436850
.................................................................................TAGCCTCTACTAGGCTTTGTAAA..........................................................................................................................................231719.007190000000100000000000001200000000000010000021000010010000000000000000000000000001002310470000000004000100000002000500800000000000000000000000021100012010000000000000000000000000000000000000000000000000000013000000000000042152719383018426000000000000000000000000000000000000000000070004130000000000000000021000000412000000000000001000000000
.................................................................................TAGCCTCTACTAGGCTTTGTT............................................................................................................................................211711.0071100000002011051000000022100300000000333133497021012726440100000000000000000000000678623000331243200012102423043303802110102202000000004105000000000010100311011000000000641500554070023020100000300520020000000000000000000000015100151011242001000011020509010002341106421213522311673060001002011100500000101002100000000000000001010000000000001100
.................................................................................TAGCCTCTACTAGGCTTT...............................................................................................................................................181663.006630000000000000000000000000000100000000000000000000010000000000000000000000000597475321206025200402010000621001363169265280210135000000000000000051300000000000001000000000000000006020200210010000000007100000000000000000000000000000200000000100100000000000000000000100100001000001000000000000000100000003000000000000000000000000000000000000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGA.........................................................................................................................................241612.006120000001000000000000000000000000000000100000100000100000000000000000000000000410220000000100100010000170016800001001101000000000001000010000011000003000000000000002040220200200101040000008000000000000000000000000000121176221533565156111700910000000002001000000000110000507011010390305160200000010000100111100105710100000001000120000003420
...............................................................................................................................ACATAGCCTATAAGAGGT.................................................................................................181546.0054600000000000000000000120100001001100010100000421000000000331000000000000000000111000000003030010030052100560030000000200000000000000020000014500014132400000000084060003010002001500092763400300100200000000010030007050143000000001010000031500000000011111001510012300101230030000010125202355663215181513000011122911720010000000000211000301000
.................................................................................TAGCCTCTACTAGGCTTTGTCATC.........................................................................................................................................241530.005300000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000304225000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................AGCCTATAAGAGGTTAGG.............................................................................................181526.0052600000000000000001200110000010000000012000000000000000000000000000000000000003525222103005222186211835713101426041559120106030012000000000000000000000000542001103000000000000001000100010020001000102000000000000000000000000000004000001100004012000000000000000000000000000010000100000200000002000000000100000000000110000000001000000000000000000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGAA...........................................................................................241509.0050900000000000000000000010000200000000001120131010202100000000000000000000000001121031100221003200011004200044562112000040000000000000000000000007129054884600400000000000001201100100020700000011300000000000000070000007011472010919200291201120000010102000000122020105010232122312131715215171210100221000001801020019012300000000300000000001040
..................................................................................................................................TAGCCTATAAGAGGTTAGG.............................................................................................191462.00462000000000000000021000000006000000001123200110101150110000000000000000000000091011700060010731600200100414002218130404001100200000000000121000000064102111340316000000114220001010001100050000010000000000000000000000000000114310007900111130200000000100000000000000000010030011010016130121403002001000001000010000292201000004100000000200000000
..............................................................................................................................GACATAGCCTATAAGAGGTT................................................................................................201430.00430000000000000000000000000020000000010000000001200001000000000000000000000000000000000000100000000000100010300000000000000000000000000000000020000020102003000000300111000000000010000000101000000500000000000000000002210100000000000000000000100402000315183102302021320101713515061513009413300000011000400117103103610117230100150011232846160
................................................................................................................................CATAGCCTATAAGAGGTTAG..............................................................................................201392.0039200000000000010100200000101000000000000000000000000000000000000000000000000007401028156664215126114001630001851831271701314000000000000000000000000001100000100000000000300000040000010000000050009000020000000000000000000022300100220000000100000020000000000001000000001100001120100201000000100000000003100000010000100000000000000000010000
..............................................................................................................................GACATAGCCTATAAGAGGTTAGT.............................................................................................231361.00361000000000000000000000050001000000000000010000000100010000000000000000000000002020000001030200000000010009100000000000000000000000000000000004000001000000000000010266000000000000000010000000001000000000000000000021130000000000020000000000003040100010131302200001000100200000020310001000010000000010000147126300300001011101000000480420
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGC............................................................................................231355.00355000000000010100000000000001000000001100123301230315010000000000000000000000041040000001232400110000130001112100000001030000010000000000000000053002022021000000002051001101400200015020001020001000000000000010000002201200000200012001000000090318002120130102225485021421331160402118020021322100020128101201133213520000100300000100112140
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGTT...........................................................................................241338.00338000000100000000001000000002000000000000100000100000100000000000000000000000021440200001000000100000600081827100010000002000001000000000000000134003100030000000006002361240210221106011090040100000001000000000000000071821100003400004012000001000018000010000001410102220223120000012330004011000101004010000218120100000000100210000232380
...................................................................................GCCTCTACTAGGCTTTGT.............................................................................................................................................181338.0033800000000000000000000000000000000000000000100000000000000000000000000000000001101020023413240201110041000560169692400006200000000000000000000000000000000000000000000100000000000000000000008000000000000000000000000000000000000000000000000000000001000000000000002000001000000000000000000000000000000000000000000000000000000000000000000
...................................................................................GCCTCTACTAGGCTTTGTC............................................................................................................................................191338.0033800000000000000000000000500000000000000000100000000100000000000000000000000001011070002206380131140041230044011000000001800000000000000000000000010100010021000000000100100210000000100000000000001000000010000000000000000220011010106000000000000010210000004210011302423001120000000012000000000001000000000000000000000000000000000000000
.............................................................................................................................AGACATAGCCTATAAGAGGTTAG..............................................................................................231312.0031200000000000000000000030000700000000020210000010101213000000000000000000000002001000000001010000000015000617000000002000000000000000000000000003803031402001000001001000000000000000000000001000000000000000100000001030250000010000160050000000103010000001210013011122214330111431011831465104000010002039020100028001240021000100100000131130
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGTA...........................................................................................241281.00281000000010000000000000000000000000000020000110110120000000000000000000000000010310102807312070000220001000233910030020360000002000000000000000002650033221000000000000000033000010010213000000100000000000000000200000002001200111160006400400000102010100000002000001000100100000011102130010100001000001313000041312100000000000100000000110
..................................................................................AGCCTCTACTAGGCTTTGTC............................................................................................................................................201277.002770000000000000000000000000000000000001001246000211430100000000000000000000000467302000110100000011002300111600000000002001000003120000200000015300202130010000000000200106030027120300000600150120000000000000000000000003800341122255100010000000010000000013430231105322033500020000101200200000100001500000000002000004010000000001000000
..................................................................................AGCCTCTACTAGGCTTTGTCTA..........................................................................................................................................221267.00267000000000000000000000000000000000000010100000000000100000000000000000000000001000100000010000100000100000000000100000000000000000000000000001000000000000000000000000100000000000000000000000000000000000000000000000000048911725214386000000000000000000000000000000000000000000010003010000000000000000001000000000000000000000000000000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTAC.........................................................................................................................................241259.002590000000000000000000000000000000000000001010000011010000000000000000000000000210102000000000000000000000002200000001000000000000000000020000020000000000000000000000000000000000000000000000000000000000000000000000000000471192020223961200012000001000000000000000000000000000000010000010000000000000001010000000000000000000000000000000000
..................................................................................AGCCTCTACTAGGCTTTGTCTAA.........................................................................................................................................231251.00251000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000045274301148101000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.................................................................................TAGCCTCTACTAGGCTTTGG.............................................................................................................................................201247.002470000010000011000000000000000000000100000101000101010100000000000000000000000155200000000131000000000030026246112000011000000000001101021000000100000000000000000000101001000000000041120000020000000000000000000000000202010000000006006000000000410000000011001201042122030200000000020202200000000001000000000000000000000000000000000000
...............................................................................................................................ACATAGCCTATAAGAGGTTAT..............................................................................................211247.002470000000000001000000003100239000000000001025002030000000000000000000000000000046340330202060120102000006103101000200000000000000000000000000000013000125035001000000301005020110010000000241100000000000000000001000000002000000000000000000000002010400000000111103100203000230140011010400710001010102110010050000000000000100000000100200
..............................................................................................................................GACATAGCCTATAAGAGGTTA...............................................................................................211245.002450000000000000000000001000021200000000000002000000100000000000000000000000000121100000000001001000001900029321000000100000000000000000000000000100010001000000000000030010001101102200000010000000000000000000000000040002000000000000010000000006011020000301035222110211332004121416010230111001000010000002318600601001000000000000110310
..............................................................................................................................GACATAGCCTATAAGAGGTTAGGT............................................................................................241239.002390000000000000000000000000000000000000000000000000100000000000000000000000000000000000000001001000000700632362600001000000001000000000000000000000000100000000000000400000010010000000010000000000000000000000000000160000000010000000000000010010000000002000000010100000000000000100110000010000100000001012810101300001010100001000001221
droSim2
-----------------------------------------GTTCTTAAAC--TA--------AAGT-TTCCTTTTAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAAAG-CCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGAACAATCAGCG-A-------------AAACGGAAT--CGATTACAGTT---------------------------------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.................................................................................TAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................22155776.005577665511629414434494064847522377641087821827690987050572394
.................................................................................TAGCCTCTACTAGGCTTTGTCTA..........................................................................................................................................23128110.0028110100150069567422691364313222444000
.................................................................................TAGCCTCTACTAGGCTTTGTCTAA.........................................................................................................................................24115175.00151750003002753254247445056260492000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGG.............................................................................................2219266.0092661402042523156216789585953589394717101
.................................................................................TAGCCTCTACTAGGCTTTGTCA...........................................................................................................................................2217149.007149101313300435497195117911682625210000
.................................................................................TAGCCTCTACTAGGCTTTGTCTAAA........................................................................................................................................2514016.0040160002001052988933101961150000
.................................................................................TAGCCTCTACTAGGCTTTGTCAA..........................................................................................................................................2313170.0031700012300369365102697012032903000
.................................................................................TAGCCTCTACTAGGCTTTGTC............................................................................................................................................2112785.002785435459261595173136186200560011210
...............................................................................................................................ACATAGCCTATAAGAGGTTAG..............................................................................................2112442.0024427212254136510723401000001
.................................................................................TAGCCTCTACTAGGCTTTGT.............................................................................................................................................2012418.0024184111316168866802199300021
....................................................................................................................................GCCTATAAGAGGTTAGG.............................................................................................171992.009920000000000992000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTG..........................................................................................................................................231978.009781011356202843083152205256111
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGA............................................................................................231722.007220001100119101163219107110000
.....................................................................................CTCTACTAGGCTTTGTCT...........................................................................................................................................181547.005476222170001233434300000
.................................................................................TAGCCTCTACTAGGCTTTGTCAAA.........................................................................................................................................241504.005040005009210312414290290000
....................................................................................................................................GCCTATAAGAGGTTAG..............................................................................................161379.003790000000000379000000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGAA...........................................................................................241372.00372000100413013412836101000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGT............................................................................................231365.00365500311393634212081700000
.................................................................................TAGCCTCTACTAGGCTTTGTAAA..........................................................................................................................................231329.0032900040024281461252000000
...............................................................................................................................ACATAGCCTATAAGAGGTT................................................................................................191311.0031100004100000286410105
.................................................................................TAGCCTCTACTAGGCTTTGTCTGT.........................................................................................................................................241282.002824003007892364023020013
....................................................................................CCTCTACTAGGCTTTGTCT...........................................................................................................................................191248.00248116240025712198100000
..................................................................................AGCCTCTACTAGGCTTTGTCT...........................................................................................................................................211238.002383001263102910400003041
.................................................................................TAGCCTCTACTAGGCTTTGTCC...........................................................................................................................................221217.00217105937100713347400000
.................................................................................TAGCCTCTACTAGGCTTTGTA............................................................................................................................................211214.00214000500912100862000000
......................................................................................TCTACTAGGCTTTGTCT...........................................................................................................................................171213.002130000001040208000000
.....................................................................................................................................CCTATAAGAGGTTAGG.............................................................................................161207.0020700000059121180000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTT..........................................................................................................................................231195.0019550316003940283424102021
.................................................................................TAGCCTCTACTAGGCTTTG..............................................................................................................................................191185.001850018615150108220101710
...............................................................................................................................ACATAGCCTATAAGAGGTTAGA.............................................................................................221177.001770002002734423733200000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGT.............................................................................................221160.001602000000010148900000
..................................................................................AGCCTCTACTAGGCTTTGTCTG..........................................................................................................................................221151.0015100326002227322810110001
.................................................................................TAGCCTCTACTAGGCTTTGTAA...........................................................................................................................................221130.001300002003568464200000
.......................................................................................CTACTAGGCTTTGTCT...........................................................................................................................................161125.001250000001052117000000
.................................................................................TAGCCTCTACTAGGCTTTGTCG...........................................................................................................................................221122.00122165720025171251500000
.................................................................................TAGCCTCTACTAGGCTTT...............................................................................................................................................181119.0011900005054000114000000
...............................................................................................................................ACATAGCCTATAAGAGGTTA...............................................................................................201112.00112000238000097200000
................................................................................................................................CATAGCCTATAAGAGGTTAGG.............................................................................................211112.00112000330015252034300000
..................................................................................AGCCTCTACTAGGCTTTGTCTGT.........................................................................................................................................231109.00109012000192433281001000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGA.........................................................................................................................................241100.00100000300282917212000000
.......................................................................................................GTGCA--TTCGAAAG-CCGATCAG...................................................................................................................21195.009520102211151257100001
.................................................................................................................................ATAGCCTATAAGAGGTTAG..............................................................................................19184.0084000000000084000000
..............................................................................................................................GACATAGCCTATAAGAGGTTAG..............................................................................................22182.0082000100101078010000
...............................................................................................................................ACATAGCCTATAAGAG...................................................................................................16177.0077000000000176000000
...............................................................................................................................ACATAGCCTATAAGAGGT.................................................................................................18177.00770100918000049000000
..............................................................................................................................GACATAGCCTATAAGAGGTTAGG.............................................................................................23176.007600040012124536300000
.................................................................................TAGCCTCTACTAGGC..................................................................................................................................................15166.0066000000001659000000
.................................................................................................................................ATAGCCTATAAGAGGTTAGG.............................................................................................20160.00600001001172138000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTTAA........................................................................................................................................25152.005200000014519140000000
...................................................................................GCCTCTACTAGGCTTTGTCT...........................................................................................................................................20151.005110013010261711000000
.....................................................................................CTCTACTAGGCTTTGT.............................................................................................................................................16150.0050000000000050000000
..................................................................................................................................TAGCCTATAAGAGGTTAGG.............................................................................................19146.0046000100330039000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTAAT........................................................................................................................................25143.00430000004422130000000
........................................................................................TACTAGGCTTTGTCT...........................................................................................................................................15142.0042000000776814000000
......................................................................................................................................CTATAAGAGGTTAGG.............................................................................................15142.0042000000110337000000
....................................................................................................................................GCCTATAAGAGGTTAGGT............................................................................................18141.0041000000000041000000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGTA...........................................................................................24140.0040000000592132000000
.................................................................................TAGCCTCTACTAGGCTTTGTGA...........................................................................................................................................22137.00370000007511113000000
....................................................................................................................................GCCTATAAGAGGTTAGGA............................................................................................18137.0037000000102034000000
..............................................................................................................................GACATAGCCTATAAGAGGTTAGGA............................................................................................24132.0032000000137741000000
.................................................................................TAGCCTCTACTAGGCTTTGTCCA..........................................................................................................................................23131.0031000000347161000000
................................................................................CTAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................23131.0031000200000125200001
.................................................................................TAGCCTCTACTAGGCTTTGTCTTA.........................................................................................................................................24130.0030000000951141000000
.................................................................................TAGCCTCTACTAGGCT.................................................................................................................................................16130.0030000000000027000003
...................................................................................................................................AGCCTATAAGAGGTTAGG.............................................................................................18130.0030000000000030000000
...................................................................................................................................AGCCTATAAGAGGTTAG..............................................................................................17130.0030000000000030000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGTA........................................................................................................................................25129.0029000000105770000000
....................................................................................CCTCTACTAGGCTTTGT.............................................................................................................................................17126.0026000000000026000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTC..........................................................................................................................................23125.0025000000138310000000
.....................................................................................CTCTACTAGGCTTTGTCA...........................................................................................................................................18124.0024000000000221100000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGAAA.......................................................................................................................................26118.001800000037170000000
.....................................................................................CTCTACTAGGCTTTGTCC...........................................................................................................................................18116.001683400000001000000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGAAA..........................................................................................25116.001600000000268000000
.....................................................................................CTCTACTAGGCTTTGTC............................................................................................................................................17116.0016000000001015000000
..................................................................................AGCCTCTACTAGGCTTTGTCA...........................................................................................................................................21114.0014000120000001100000
......................................................................................TCTACTAGGCTTTGTCA...........................................................................................................................................17114.0014000000000113000000
..................................................................................................................................TAGCCTATAAGAGGTTAG..............................................................................................18113.0013000000000013000000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGAC...........................................................................................24113.001354200000002000000
...............................................................................................................................ACATAGCCTATAAGAGG..................................................................................................17113.0013000000000013000000
.................................................................................................................................ATAGCCTATAAGAGGTT................................................................................................17113.0013000000000013000000
..............................................................................................................................GACATAGCCTATAAGAGGTTAGA.............................................................................................23112.001200000042240000000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGAT...........................................................................................24112.001230200011221000000
..................................................................................AGCCTCTACTAGGCTTTGTC............................................................................................................................................20111.001100080100002000000
......................................................................................TCTACTAGGCTTTGT.............................................................................................................................................15111.0011000000000011000000
................................................................................................................................CATAGCCTATAAGAGGTT................................................................................................18111.0011000000000011000000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGC............................................................................................23111.001100000044002100000
.....................................................................................CTCTACTAGGCTTTGTCTA..........................................................................................................................................19110.001000000000109000000
.......................................................................................CTACTAGGCTTTGTCA...........................................................................................................................................16110.001000000000208000000
.................................................................................TAGCCTCTACTAGGCTTTGTCAT..........................................................................................................................................23110.001000100001420020000
....................................................................................................................................GCCTATAAGAGGTTAGT.............................................................................................17110.0010000000000010000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGC.........................................................................................................................................24110.001000010036000000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTAAC........................................................................................................................................2519.00900000030240000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGTAA.......................................................................................................................................2619.00900000021140010000
..................................................................................AGCCTCTACTAGGCTTTGTCTA..........................................................................................................................................2219.00900000001440000000
.................................................................................................................................ATAGCCTATAAGAGGTTA...............................................................................................1819.00900000000009000000
..................................................................................AGCCTCTACTAGGCTTTGT.............................................................................................................................................1918.00800010000007000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTAC.........................................................................................................................................2418.00800000031220000000
.................................................................................TAGCCTCTACTAGGCTTTGTT............................................................................................................................................2118.00800010000007000000
..................................................................................AGCCTCTACTAGGCTTTGTCTAA.........................................................................................................................................2318.00800000000440000000
..................................................................................AGCCTCTACTAGGCTTTGTCTGA.........................................................................................................................................2318.00800010022210000000
................................................................................................................................CATAGCCTATAAGAGGTTAG..............................................................................................2018.00800020000006000000
................................................................................................................................CATAGCCTATAAGAGGTTAGGA............................................................................................2217.00700010013101000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTAG.........................................................................................................................................2417.00700000002140000000
....................................................................................................................................GCCTATAAGAGGTTAGA.............................................................................................1717.00700000000007000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGAA........................................................................................................................................2517.00700000042100000000
...............................................................................................................................ACATAGCCTATAAGAGGTTAA..............................................................................................2117.00700000000007000000
.....................................................................................CTCTACTAGGCTTTGTCTG..........................................................................................................................................1917.00701000000006000000
....................................................................................CCTCTACTAGGCTTTGTC............................................................................................................................................1817.00700010001005000000
...................................................................................GCCTCTACTAGGCTTTGTCTA..........................................................................................................................................2117.00700000004300000000
.................................................................................TAGCCTCTACTAGGCTTTGTCAAG.........................................................................................................................................2417.00700000020230000000
...............................................................................................................................ACATAGCCTATAAGA....................................................................................................1517.00700000032101000000
..............................................................................................................................GACATAGCCTATAAGAGGTT................................................................................................2016.00600000000006000000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGCA...........................................................................................2416.00600000012120000000
......................................................................................TCTACTAGGCTTTGTCTA..........................................................................................................................................1816.00600000000105000000
......................................................................................TCTACTAGGCTTTGTC............................................................................................................................................1616.00600000000105000000
..............................................................................................................TTCGAAAG-CCGATCAGACATAGCCTA.........................................................................................................2616.00600000001220010000
....................................................................................CCTCTACTAGGCTTTGTCA...........................................................................................................................................1916.00600000000213000000
..................................................................................................................................TAGCCTATAAGAGGTT................................................................................................1616.00600000000006000000
.......................................................................................................GTGCA--TTCGAAAG-CCGATCA....................................................................................................................2016.00600000011013000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTCA.........................................................................................................................................2416.00600000011130000000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGG............................................................................................2316.00610010011011000000
....................................................................................................................................GCCTATAAGAGGTTA...............................................................................................1516.00600000000006000000
...................................................................................GCCTCTACTAGGCTTTGTCTGT.........................................................................................................................................2215.00500010012100000000
.................................................................................TAGCCTCTACTAGGCTTTGTCAC..........................................................................................................................................2315.00500000001130000000
.................................................................................TAGCCTCTACTAGGCTTTGTTA...........................................................................................................................................2215.00500000000004100000
...................................................................................GCCTCTACTAGGCTTTGTCA...........................................................................................................................................2015.00500000010201100000
..................................................................................AGCCTCTACTAGGCTTTGTCTGTA........................................................................................................................................2415.00500000011030000000
droSec2
TCTT------------------------------------------AAA-A--TA--------AAGT-TTCCTTTTAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAAAG-CCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGTGAACAATCAGCG-A-------------AAACGGAAT--CGATTACAGTT---------------------------------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.................................................................................TAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................22120332.0020332688640582004841
.................................................................................TAGCCTCTACTAGGCTTTGTCA...........................................................................................................................................2213076.00307615562765150
...............................................................................................................................ACATAGCCTATAAGAGGTTAGG.............................................................................................2212199.002199100093461645
.................................................................................TAGCCTCTACTAGGCTTTGTC............................................................................................................................................211992.009922686487231
..................................................................................AGCCTCTACTAGGCTTTGTCT...........................................................................................................................................211565.00565550186
.................................................................................TAGCCTCTACTAGGCTTTGT.............................................................................................................................................201428.004284711253117
.................................................................................TAGCCTCTACTAGGCTTTGTCTG..........................................................................................................................................231246.0024621921015
...............................................................................................................................ACATAGCCTATAAGAGGTTAG..............................................................................................211209.0020951515552
.................................................................................TAGCCTCTACTAGGCTTTGTCTA..........................................................................................................................................231127.00127119035
................................................................................................................................CATAGCCTATAAGAGGTTAGG.............................................................................................211113.0011394298
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGT............................................................................................231110.001102073053
.................................................................................TAGCCTCTACTAGGCTTTGTCTT..........................................................................................................................................23182.0082653014
..................................................................................AGCCTCTACTAGGCTTTGTCTG..........................................................................................................................................22181.008181000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGT.............................................................................................22174.00744251629
...................................................................................GCCTCTACTAGGCTTTGTCT...........................................................................................................................................20174.007468051
...............................................................................................................................ACATAGCCTATAAGAGGTT................................................................................................19148.004810839
.....................................................................................CTCTACTAGGCTTTGTCT...........................................................................................................................................18146.004635524
..............................................................................................................................GACATAGCCTATAAGAGGTTAGG.............................................................................................23143.00431721014
.................................................................................TAGCCTCTACTAGGCTTTGTCAA..........................................................................................................................................23139.003931071
.................................................................................TAGCCTCTACTAGGCTTTGTCG...........................................................................................................................................22138.003860320
................................................................................CTAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................23137.0037140167
.................................................................................TAGCCTCTACTAGGCTTTGTCTAA.........................................................................................................................................24131.003130010
....................................................................................CCTCTACTAGGCTTTGTCT...........................................................................................................................................19130.003027111
..................................................................................AGCCTCTACTAGGCTTTGTC............................................................................................................................................20125.002524010
.................................................................................................................................ATAGCCTATAAGAGGTTAGG.............................................................................................20124.002413056
.................................................................................TAGCCTCTACTAGGCTTTGTCC...........................................................................................................................................22123.002371123
.................................................................................TAGCCTCTACTAGGCTTTGTCTGT.........................................................................................................................................24120.002010424
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGA............................................................................................23120.002010343
..................................................................................AGCCTCTACTAGGCTTTGTCA...........................................................................................................................................21119.001915040
...............................................................................................................................ACATAGCCTATAAGAGGTTAGA.............................................................................................22114.00143344
.................................................................................TAGCCTCTACTAGGCTTTGTCTGA.........................................................................................................................................24114.001411102
..............................................................................................................................GACATAGCCTATAAGAGGTTAG..............................................................................................22112.00123216
.................................................................................TAGCCTCTACTAGGCTTTG..............................................................................................................................................19112.001212000
.......................................................................................................GTGCA--TTCGAAAG-CCGATCAG...................................................................................................................21111.00114421
..............................................................................................................................GACATAGCCTATAAGAGGTT................................................................................................2019.0090117
..................................................................................AGCCTCTACTAGGCTTTGTCTA..........................................................................................................................................2219.0098010
..................................................................................AGCCTCTACTAGGCTTTGTCTT..........................................................................................................................................2218.0088000
................................................................................................................................CATAGCCTATAAGAGGTTAG..............................................................................................2018.0087001
..................................................................................................................................TAGCCTATAAGAGGTTAGG.............................................................................................1917.0075020
...................................................................................GCCTCTACTAGGCTTTGTCTG..........................................................................................................................................2116.0066000
..................................................................................AGCCTCTACTAGGCTTTGTCG...........................................................................................................................................2115.0055000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGTT...........................................................................................2415.0051004
.................................................................................TAGCCTCTACTAGGCTTTGTAA...........................................................................................................................................2215.0050050
...................................................................................GCCTCTACTAGGCTTTGTC............................................................................................................................................1915.0053020
...............................................................................................................................ACATAGCCTATAAGAGGTTA...............................................................................................2015.0050023
.................................................................................TAGCCTCTACTAGGCTTTGTAAA..........................................................................................................................................2314.0043001
...............................................................................................................................ACATAGCCTATAAGAGGTTAGC.............................................................................................2214.0041021
...............................................................................TCTAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................2414.0040022
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGAA...........................................................................................2414.0041021
.................................................................................TAGCCTCTACTAGGCTTTGTCTC..........................................................................................................................................2314.0044000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGG.........................................................................................................................................2414.0043001
.................................................................................TAGCCTCTACTAGGCTTTGTCTAAA........................................................................................................................................2514.0044000
..................................................................................AGCCTCTACTAGGCTTTGTCTAA.........................................................................................................................................2313.0033000
................................................................................................................................CATAGCCTATAAGAGGTTAGGA............................................................................................2213.0033000
...............................................................................................................................ACATAGCCTATAAGAGGT.................................................................................................1813.0031020
..................................................................................AGCCTCTACTAGGCTTTGT.............................................................................................................................................1913.0033000
................................................................................CTAGCCTCTACTAGGCTTTGTCA...........................................................................................................................................2313.0030030
..................................................................................AGCCTCTACTAGGCTTTGTCTGT.........................................................................................................................................2313.0033000
.................................................................................TAGCCTCTACTAGGCTTTGTA............................................................................................................................................2112.0021010
................................................................................CTAGCCTCTACTAGGCTTTGTC............................................................................................................................................2212.0021010
..................................................................................AGCCTCTACTAGGCTTTGTCTAAA........................................................................................................................................2412.0022000
..................................................................................AGCCTCTACTAGGCTTTGTA............................................................................................................................................2012.0022000
...................................................................................................................................AGCCTATAAGAGGTTAGG.............................................................................................1812.0021001
.................................................................................TAGCCTCTACTAGGCTTTGTCAAA.........................................................................................................................................2412.0021010
.................................................................................TAGCCTCTACTAGGCTTTGTG............................................................................................................................................2112.0022000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGC............................................................................................2312.0021010
..................................................................................AGCCTCTACTAGGCTTTGTCTGA.........................................................................................................................................2312.0021010
.......................................................................................................GTGCA--TTCGAAAG-CCGATCA....................................................................................................................2012.0020011
............................................................................................................................CAGACATAGCCTATAAGAGGTT................................................................................................2211.0010100
.................................................................................TAGCCTCTACTAGGCTTTGTCTGGCT.......................................................................................................................................2611.0011000
.................................................................................TAGCCTCTACTAGGCTTTGTTA...........................................................................................................................................2211.0010010
.................................................................................TAGCCTCTACTAGGCTTTGCT............................................................................................................................................2111.0011000
.................................................................................TAGCCTCTACTAGGCTTT...............................................................................................................................................1811.0011000
..............................................................................................................................GACATAGCCTATAAGAGGTTAGGA............................................................................................2411.0011000
....................................................................................CCTCTACTAGGCTTTGTCTA..........................................................................................................................................2011.0011000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGAT...........................................................................................2411.0011000
..............................................................................................................................GACATAGCCTATAAGAGGT.................................................................................................1911.0010001
.................................................................................TAGCCTCTACTAGGCTTTGTCTCCT........................................................................................................................................2511.0011000
................................................................................................................................CATAGCCTATAAGAGGTTAGGAT...........................................................................................2311.0011000
droYak3
----------------------------------------------------------------------CCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TACGAAAG-CCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGTGAAAAATCAGCG-A-------------AAACGGAAT--CGATTACAGTTT--------------------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.................................................................................TAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................22130231.00302313914485993925469771510255454929195
.................................................................................TAGCCTCTACTAGGCTTTGTCC...........................................................................................................................................2213647.00364778362540300000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGG.............................................................................................2212629.002629220551822092985650110
.................................................................................TAGCCTCTACTAGGCTTTGTC............................................................................................................................................2111991.00199125221265355777230280
.................................................................................TAGCCTCTACTAGGCTTTGTCA...........................................................................................................................................2211971.001971033440912077860000
..................................................................................AGCCTCTACTAGGCTTTGTCT...........................................................................................................................................2111248.001248212311020100020
.................................................................................TAGCCTCTACTAGGCTTTGTCTT..........................................................................................................................................231300.0030002275922220060
.................................................................................TAGCCTCTACTAGGCTTTGTCTA..........................................................................................................................................231253.0025302261961100000
..................................................................................AGCCTCTACTAGGCTTTGTCTG..........................................................................................................................................221234.002340221921000010
.................................................................................TAGCCTCTACTAGGCTTTGTCTG..........................................................................................................................................231231.002310220322211000
...............................................................................................................................ACATAGCCTATAAGAGGTTAG..............................................................................................211206.002062130126730190000
................................................................................................................................CATAGCCTATAAGAGGTTAGG.............................................................................................211182.001820179210000000
.................................................................................TAGCCTCTACTAGGCTTTGT.............................................................................................................................................201167.00167093314614170110
...................................................................................GCCTCTACTAGGCTTTGTCT...........................................................................................................................................201126.001261120212000000
................................................................................CTAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................231121.001210358150000000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGT............................................................................................23162.00622301092630000
.................................................................................TAGCCTCTACTAGGCTTTGTCAA..........................................................................................................................................23157.00570381810000000
..............................................................................................................................GACATAGCCTATAAGAGGTTAGG.............................................................................................23154.0054041700510000
..................................................................................AGCCTCTACTAGGCTTTGTC............................................................................................................................................20148.0048047100000000
................................................................................CTAGCCTCTACTAGGCTTTGTCC...........................................................................................................................................23147.0047004700000000
.................................................................................TAGCCTCTACTAGGCTTTGTCG...........................................................................................................................................22147.0047135191000000
.....................................................................................CTCTACTAGGCTTTGTCT...........................................................................................................................................18146.00462213332300000
.................................................................................TAGCCTCTACTAGGCTTTGTCTAA.........................................................................................................................................24141.0041035220200000
.................................................................................................................................ATAGCCTATAAGAGGTTAGG.............................................................................................20130.0030028110000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTAAA........................................................................................................................................25129.0029029000000000
..................................................................................AGCCTCTACTAGGCTTTGTCA...........................................................................................................................................21129.0029025040000000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGT.............................................................................................22126.0026033523100000
..............................................................................................................................GACATAGCCTATAAGAGGTTAG..............................................................................................22125.0025018000340000
....................................................................................CCTCTACTAGGCTTTGTCT...........................................................................................................................................19121.0021118100010000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGT.........................................................................................................................................24121.0021217100100000
..................................................................................AGCCTCTACTAGGCTTTGTCTGT.........................................................................................................................................23120.002029511000200
..................................................................................AGCCTCTACTAGGCTTTGTCTT..........................................................................................................................................22118.0018018000000000
.................................................................................TAGCCTCTACTAGGCTTTGC.............................................................................................................................................20115.0015001500000000
..................................................................................AGCCTCTACTAGGCTTTGTCTA..........................................................................................................................................22115.0015015000000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTC..........................................................................................................................................23113.0013031000000000
...................................................................................GCCTCTACTAGGCTTTGTCTG..........................................................................................................................................21113.0013013000000000
...............................................................................................................................ACATAGCCTATAAGAGGTT................................................................................................19113.001307001400010
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGA............................................................................................23110.001005100120100
.......................................................................................................GTGCA--TACGAAAG-CCGATCAG...................................................................................................................21110.001014111110000
................................................................................................................................CATAGCCTATAAGAGGTTAG..............................................................................................2018.00808000000000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGTT...........................................................................................2418.00805210000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGTGCA--....................................................................................................................................2717.00707000000000
..................................................................................AGCCTCTACTAGGCTTTGT.............................................................................................................................................1917.00707000000000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGC............................................................................................2317.00701600000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGG.........................................................................................................................................2416.00615000000000
...............................................................................................................................ACATAGCCTATAAGAGGTTA...............................................................................................2016.00600100220100
.................................................................................TAGCCTCTACTAGGCTTTG..............................................................................................................................................1916.00602000000040
.................................................................................TAGCCTCTACTAGGCTTTGTCAAA.........................................................................................................................................2416.00606000000000
.................................................................................TAGCCTCTACTAGGCTTTGTAA...........................................................................................................................................2215.00504010000000
...............................................................................TCTAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................2415.00500500000000
..................................................................................AGCCTCTACTAGGCTTTGTCC...........................................................................................................................................2115.00501400000000
.................................................................................TAGCCTCTACTAGGCTTTGTG............................................................................................................................................2115.00500400100000
.................................................................................TAGCCTCTACTAGGCTTTGTA............................................................................................................................................2115.00504010000000
..................................................................................AGCCTCTACTAGGCTTTGTCAA..........................................................................................................................................2214.00404000000000
..................................................................................AGCCTCTACTAGGCTTTGTCTAA.........................................................................................................................................2314.00404000000000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGTA...........................................................................................2414.00401300000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTTG.........................................................................................................................................2414.00404000000000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGA.............................................................................................2214.00404000000000
..............................................................................................................................GACATAGCCTATAAGAGGTTAGT.............................................................................................2314.00401120000000
..............................................................................ATCTAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................2514.00400400000000
..............................................................................................................TACGAAAG-CCGATCAGACATAGCCTA.........................................................................................................2614.00403000010000
..................................................................................AGCCTCTACTAGGCTTTGTCTGC.........................................................................................................................................2314.00400400000000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGC.............................................................................................2214.00400400000000
..................................................................................AGCCTCTACTAGGCTTTGTCTGA.........................................................................................................................................2313.00303000000000
.................................................................................TAGCCTCTACTAGGCTTTGTAC...........................................................................................................................................2213.00300300000000
.....................................................................................CTCTACTAGGCTTTGTCC...........................................................................................................................................1813.00320100000000
...........................................................................................................................TCAGACATAGCCTATAAGAGGTTAGG.............................................................................................2613.00301020000000
.................................................................................TAGCCTCTACTAGGCTTTGTCAC..........................................................................................................................................2313.00300210000000
....................................................................................CCTCTACTAGGCTTTGTCTG..........................................................................................................................................2013.00303000000000
...................................................................................GCCTCTACTAGGCTTTGTC............................................................................................................................................1913.00303000000000
................................................................................CTAGCCTCTACTAGGCTTTGTC............................................................................................................................................2213.00300300000000
..............................................................................................................TACGAAAG-CCGATCAGACATAGCC...........................................................................................................2413.00301200000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTAC.........................................................................................................................................2413.00301200000000
.................................................................................TAGCCTCTACTAGGCTTTGTCAT..........................................................................................................................................2313.00302100000000
................................................................................CTAGCCTCTACTAGGCTTTGTCA...........................................................................................................................................2313.00301110000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTAG.........................................................................................................................................2413.00302100000000
..................................................................................................................................TAGCCTATAAGAGGTTAGG.............................................................................................1912.00201100000000
...................................................................................................................................AGCCTATAAGAGGTTAGG.............................................................................................1812.00202000000000
..............................................................................................................................GACATAGCCTATAAGAGGTT................................................................................................2012.00200000020000
.....................................................................................CTCTACTAGGCTTTGTCA...........................................................................................................................................1812.00201010000000
................................................................................CTAGCCTCTACTAGGCTTTGTCTAA.........................................................................................................................................2512.00202000000000
...................................................................................GCCTCTACTAGGCTTTGTCA...........................................................................................................................................2012.00202000000000
................................................................................................................................CATAGCCTATAAGAGGTTAGGT............................................................................................2212.00202000000000
droEre2
TCCAAT----------------------------------CGTTCTATCAC--CA--------CAGT-TTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCAAAAG-CCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGAACAAGCAGCG-A-------------AAACGGAAT--CGATTACAGTTT--------------------------------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.................................................................................TAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................22136662.003666224825349359126133604116160
...............................................................................................................................ACATAGCCTATAAGAGGTTAGG.............................................................................................2213493.003493217761155236069192
..................................................................................AGCCTCTACTAGGCTTTGTCT...........................................................................................................................................2111911.0019111903140030
.................................................................................TAGCCTCTACTAGGCTTTGTC............................................................................................................................................2111614.00161411388046418314320
.................................................................................TAGCCTCTACTAGGCTTTGTCA...........................................................................................................................................2211164.001164883401916132290
...............................................................................................................................ACATAGCCTATAAGAGGTTAG..............................................................................................211520.0052015602322341050
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGT............................................................................................231459.00459351702436356
.................................................................................TAGCCTCTACTAGGCTTTGTCTG..........................................................................................................................................231452.0045241203116200
.................................................................................TAGCCTCTACTAGGCTTTGT.............................................................................................................................................201348.0034810202201185353
.................................................................................TAGCCTCTACTAGGCTTTGTCTT..........................................................................................................................................231288.0028824611702517
.................................................................................TAGCCTCTACTAGGCTTTGTCAA..........................................................................................................................................231182.00182181100000
.................................................................................TAGCCTCTACTAGGCTTTGTCTA..........................................................................................................................................231181.00181173111005
..................................................................................AGCCTCTACTAGGCTTTGTCTG..........................................................................................................................................221175.00175172010110
................................................................................................................................CATAGCCTATAAGAGGTTAGG.............................................................................................211168.00168168000000
...................................................................................GCCTCTACTAGGCTTTGTCT...........................................................................................................................................201140.00140135041000
.................................................................................TAGCCTCTACTAGGCTTTGTCC...........................................................................................................................................221138.001382210651220
.................................................................................TAGCCTCTACTAGGCTTTG..............................................................................................................................................19182.008282000000
..................................................................................AGCCTCTACTAGGCTTTGTC............................................................................................................................................20181.008181000000
..................................................................................AGCCTCTACTAGGCTTTGTCA...........................................................................................................................................21181.008180000010
.....................................................................................CTCTACTAGGCTTTGTCT...........................................................................................................................................18173.0073140304520
...............................................................................................................................ACATAGCCTATAAGAGGTTAGT.............................................................................................22170.0070303040240
................................................................................CTAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................23169.0069435911100
..............................................................................................................................GACATAGCCTATAAGAGGTTAGG.............................................................................................23141.0041251032100
....................................................................................CCTCTACTAGGCTTTGTCT...........................................................................................................................................19134.0034140001190
.................................................................................TAGCCTCTACTAGGCTTTGTCTAA.........................................................................................................................................24132.003232000000
..............................................................................................................................GACATAGCCTATAAGAGGTTAG..............................................................................................22132.0032702012110
...............................................................................................................................ACATAGCCTATAAGAGGTT................................................................................................19124.002410109130
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGA............................................................................................23124.002420000040
...............................................................................................................................ACATAGCCTATAAGAGGTTA...............................................................................................20123.002330306110
..................................................................................AGCCTCTACTAGGCTTTGTCG...........................................................................................................................................21120.002020000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGT.........................................................................................................................................24119.001915000220
..................................................................................AGCCTCTACTAGGCTTTGTCTT..........................................................................................................................................22118.001818000000
.................................................................................TAGCCTCTACTAGGCTTTGTCG...........................................................................................................................................22118.001813012110
..................................................................................AGCCTCTACTAGGCTTTGT.............................................................................................................................................19118.00189000018
..................................................................................AGCCTCTACTAGGCTTTGTCAA..........................................................................................................................................22117.001717000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTAAA........................................................................................................................................25115.001515000000
.................................................................................TAGCCTCTACTAGGCTTTGTAA...........................................................................................................................................22114.001414000000
.................................................................................................................................ATAGCCTATAAGAGGTTAGG.............................................................................................20113.00137001050
.................................................................................TAGCCTCTACTAGGCTTTGTCTGA.........................................................................................................................................24112.001212000000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGA.............................................................................................22112.00125000430
...................................................................................GCCTCTACTAGGCTTTGTCTG..........................................................................................................................................21112.001212000000
.................................................................................TAGCCTCTACTAGGCTTTGTAAA..........................................................................................................................................23111.001110000001
................................................................................................................................CATAGCCTATAAGAGGTTAG..............................................................................................20111.001110000010
..............................................................................................................................GACATAGCCTATAAGAGGTT................................................................................................20110.00100020170
..................................................................................AGCCTCTACTAGGCTTTGTCTA..........................................................................................................................................2219.0099000000
..................................................................................AGCCTCTACTAGGCTTTGTCTGT.........................................................................................................................................2319.0099000000
.................................................................................TAGCCTCTACTAGGCTTTGTA............................................................................................................................................2118.0087010000
.................................................................................TAGCCTCTACTAGGCTTTGTCTC..........................................................................................................................................2318.0083311000
..............................................................................................................................GACATAGCCTATAAGAGGTTAGGT............................................................................................2418.0080000017
.................................................................................TAGCCTCTACTAGGCTTTGTCAAA.........................................................................................................................................2427.001414000000
.................................................................................TAGCCTCTACTAGGCTTTGTG............................................................................................................................................2117.0077000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGTGCA--....................................................................................................................................2716.0066000000
...................................................................................GCCTCTACTAGGCTTTGTCA...........................................................................................................................................2016.0066000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGTA........................................................................................................................................2515.0055000000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGTT...........................................................................................2415.0052010020
...............................................................................................................................ACATAGCCTATAAGAGGT.................................................................................................1815.0050000140
............................................................................................................................CAGACATAGCCTATAAGAGGTT................................................................................................2215.0050000320
.................................................................................TAGCCTCTACTAGGCTTTGTT............................................................................................................................................2114.0043000001
.................................................................................TAGCCTCTACTAGGCTTTTCT............................................................................................................................................2114.0043000010
...............................................................................TCTAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................2414.0040010030
..................................................................................AGCCTCTACTAGGCTTTGTCTAAA........................................................................................................................................2414.0044000000
.................................................................................TAGCCTCTACTAGGCTTTGTAG...........................................................................................................................................2214.0044000000
..................................................................................AGCCTCTACTAGGCTTTGTCC...........................................................................................................................................2114.0043100000
...........................................................................................................................TCAGACATAGCCTATAAGAGGT.................................................................................................2214.0041000300
.................................................................................TAGCCTCTACTAGGCTTTGTCAT..........................................................................................................................................2314.0044000000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGAA...........................................................................................2414.0043000100
..............................................................................................................................GACATAGCCTATAAGAGGT.................................................................................................1913.0030000300
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGC............................................................................................2313.0031000011
...............................................................................................................................ACATAGCCTATAAGAGGTTAT..............................................................................................2113.0032010000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGTGC.......................................................................................................................................2613.0033000000
.................................................................................TAGCCTCTACTAGGCTTTGTGA...........................................................................................................................................2213.0033000000
..................................................................................AGCCTCTACTAGGCTTTGTCTGA.........................................................................................................................................2313.0033000000
.................................................................................TAGCCTCTACTAGGCTTTGTCAC..........................................................................................................................................2313.0033000000
..................................................................................AGCCTCTACTAGGCTTTGTCTAA.........................................................................................................................................2313.0033000000
..............................................................................................................................GACATAGCCTATAAGAGGTTA...............................................................................................2113.0030000120
..............................................................................................................TTCAAAAG-CCGATCAGACATAGCCTA.........................................................................................................2613.0033000000
.................................................................................TAGCCTCTACTAGGCTTTGTCTGG.........................................................................................................................................2413.0033000000
...................................................................................GCCTCTACTAGGCTTTGTCAA..........................................................................................................................................2113.0033000000
.......................................................................................................GTGCA--TTCAAAAG-CCGATCAG...................................................................................................................2113.0032000010
.................................................................................TAGCCTCTACTAGGCTTTGTCTGGC........................................................................................................................................2513.0033000000
...............................................................................................................................ACATAGCCTATAAGAGGTTAGGTA...........................................................................................2412.0021000100
...................................................................................GCCTCTACTAGGCTTTGTCTT..........................................................................................................................................2112.0022000000
..............................................................................ATCTAGCCTCTACTAGGCTTTGTCT...........................................................................................................................................2512.0021000100

Generated: 10/20/2015 at 07:47 PM