ID:

dpe-mir-263a

 Coordinate:

scaffold_1:8768298-8768386 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-37.8 -37.7 -37.7

Flybase annnotation

pre_miRNA [Dper\mir-263a-RM]; miRNA [Dper\miR-263a-RA]

No Repeatable elements found

Sense Strand Reads

AACTAGTCACAAAAGTGAAATAAGAAGTGAAAAACTCATAAGTGTATCCACATCCCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTTTTCAATACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGACTCATCTCAATCAATCCCAATCGCAACCAACGTTGATAATTGTGTTAATGTG

**************************************************..(((((.(((.((..(((.((((((.(((..(((((((..............)))))))))).)))))).)))..)).)))))))).....*********************************************** 		Read size # Mismatch Hit Count Total Norm Total V057

head

 M021

embryo

 V111

male body		 M042

female body

 V050

head

 V042

embryo
.................................................................AATGGCACTGGAAGAATTCACGGG.................................................................................................... 24 0 1 66268.00 66268 6915 35125 10722 9338 1883 2285
.................................................................AATGGCACTGGAAGAATTCAC....................................................................................................... 21 0 1 24570.00 24570 14760 320 3062 1958 4308 162
.................................................................AATGGCACTGGAAGAATTCACGG..................................................................................................... 23 0 1 21305.00 21305 3870 5813 5739 4715 864 304
.................................................................AATGGCACTGGAAGAATTCACG...................................................................................................... 22 0 1 19534.00 19534 8932 606 2654 4055 2938 349
.................................................................AATGGCACTGGAAGAATTCA........................................................................................................ 20 0 1 12871.00 12871 7933 24 1479 886 2476 73
.................................................................AATGGCACTGGAAGAATTCACGGGT................................................................................................... 25 1 1 3199.00 3199 710 158 1714 444 112 61
.................................................................AATGGCACTGGAAGAATTC......................................................................................................... 19 0 1 2585.00 2585 1647 27 415 85 403 8
.................................................................AATGGCACTGGAAGAATTCACGGGA................................................................................................... 25 1 1 1525.00 1525 173 952 213 111 43 33
..................................................................ATGGCACTGGAAGAATTCACGGG.................................................................................................... 23 0 1 1136.00 1136 24 72 25 1005 9 1
.................................................................AATGGCACTGGAAGAATTCACGGT.................................................................................................... 24 1 1 607.00 607 202 7 247 93 53 5
..................................................................ATGGCACTGGAAGAATTCACGG..................................................................................................... 22 0 1 554.00 554 15 9 14 513 3 0
.........................................................................................................CGTGATCTCTTAGTGGCATCTA.............................................................. 22 0 1 537.00 537 50 364 11 56 10 46
.................................................................AATGGCACTGGAAGAATTCACGT..................................................................................................... 23 1 1 464.00 464 219 3 110 69 62 1
..................................................................ATGGCACTGGAAGAATTCACG...................................................................................................... 21 0 1 455.00 455 24 0 4 416 10 1
.................................................................AATGGCACTGGAAGAATTCACA...................................................................................................... 22 1 1 352.00 352 238 1 22 25 63 3
.................................................................AATGGCACGGGAAGAATTCACGGG.................................................................................................... 24 1 1 351.00 351 14 4 2 331 0 0
.................................................................AATTGCACTGGAAGAATTCACGGG.................................................................................................... 24 1 1 247.00 247 1 231 11 4 0 0
..................................................................ATGGCACTGGAAGAATTCAC....................................................................................................... 20 0 1 245.00 245 9 1 5 222 7 1
.................................................................AAGGGCACTGGAAGAATTCAC....................................................................................................... 21 1 1 235.00 235 226 0 0 0 8 1
.................................................................AATGGCACTGGAAGAATTCACGGGTT.................................................................................................. 26 1 1 216.00 216 33 3 151 28 1 0
..................................................................AATGCACTGGAAGAATTCACGGG.................................................................................................... 23 2 1 176.00 176 0 153 11 12 0 0
.................................................................AATGGCACGGGAAGAATTCACGG..................................................................................................... 23 1 1 162.00 162 10 1 1 150 0 0
.................................................................AATGGCACGGGAAGAATTCACG...................................................................................................... 22 1 1 161.00 161 20 0 0 140 1 0
.................................................................AATGGCACAGGAAGAATTCACGGG.................................................................................................... 24 1 1 156.00 156 5 2 1 146 0 2
.................................................................AATGGCACTGGAAGAATTCACT...................................................................................................... 22 1 1 148.00 148 98 2 15 11 20 2
.................................................................AATGGCACTGGAAGAATTCACGGGG................................................................................................... 25 0 1 138.00 138 5 124 6 3 0 0
.................................................................AATGGCACTGGAAGAATTCAA....................................................................................................... 21 1 1 132.00 132 97 0 1 5 27 2
.................................................................AATGGCACTGTAAGAATTCACGGG.................................................................................................... 24 1 1 130.00 130 2 117 9 2 0 0
.................................................................AATGGCACTGGAAGAATT.......................................................................................................... 18 0 1 128.00 128 91 2 5 11 18 1
.................................................................AATGGCACTGGAAGAATTCACGGC.................................................................................................... 24 1 1 128.00 128 49 32 24 14 8 1
.................................................................AATGGCACTGGAGGAATTCACGGG.................................................................................................... 24 1 1 122.00 122 16 92 6 5 1 2
.................................................................AATGGCACGGGAAGAATTCAC....................................................................................................... 21 1 1 120.00 120 36 0 1 82 1 0
.................................................................AATGGCACTGGAAGAATTCACGTG.................................................................................................... 24 1 1 119.00 119 84 2 13 6 10 4
.................................................................AATGTCACTGGAAGAATTCACGGG.................................................................................................... 24 1 1 119.00 119 4 90 15 10 0 0
.................................................................AATGGCACTGGAAGCATTCAC....................................................................................................... 21 1 1 117.00 117 96 0 0 0 18 3
.................................................................AATGGCACTGGCAGAATTCAC....................................................................................................... 21 1 1 117.00 117 95 0 2 0 18 2
.........................................................................................................CGTGATCTCTTAGTGGCATCT............................................................... 21 0 1 115.00 115 18 78 3 8 2 6
.................................................................AATGGCACTGGAAGAATTCACGCG.................................................................................................... 24 1 1 112.00 112 79 5 5 1 18 4
..................................................................ATGGCACTGGAAGAATTCA........................................................................................................ 19 0 1 112.00 112 10 0 2 97 3 0
.................................................................AATCGCACTGGAAGAATTCACGGG.................................................................................................... 24 1 1 107.00 107 12 78 11 6 0 0
.................................................................AATGGCACTGGAAGAATTCACGGA.................................................................................................... 24 1 1 102.00 102 14 29 24 25 9 1
.................................................................AATGGCACCGGAAGAATTCACGGG.................................................................................................... 24 1 1 99.00 99 7 15 10 65 0 2
.................................................................AATGGCACTGGAAGAATTCACTGG.................................................................................................... 24 1 1 92.00 92 29 20 17 18 6 2
.................................................................AAGGGCACTGGAAGAATTCACG...................................................................................................... 22 1 1 92.00 92 86 0 0 0 5 1
.................................................................AATGGCACTGGGAGAATTCAC....................................................................................................... 21 1 1 87.00 87 73 0 2 0 12 0
.................................................................AATGGCACTGGAAGAATTCACGGGTTT................................................................................................. 27 1 1 87.00 87 13 2 67 5 0 0
.................................................................AATGGCACTGGCAGAATTCA........................................................................................................ 20 1 1 86.00 86 71 0 0 0 11 4
.................................................................AAGGGCACTGGAAGAATTCACGGG.................................................................................................... 24 1 1 84.00 84 71 3 2 2 3 3
.................................................................AATGGCACTGGAAGAATTCACGGGAA.................................................................................................. 26 2 1 83.00 83 4 76 1 2 0 0
.................................................................AATGGCACTGGAAGAATTCACCGG.................................................................................................... 24 1 1 81.00 81 49 3 5 9 9 6
...................................................................TGGCACTGGAAGAATTCACGGG.................................................................................................... 22 0 1 81.00 81 0 8 5 67 1 0
.................................................................GATGGCACTGGAAGAATTCACGGG.................................................................................................... 24 1 1 80.00 80 9 21 19 30 0 1
.................................................................AATGGCACAGGAAGAATTCACGG..................................................................................................... 23 1 1 77.00 77 2 1 2 72 0 0
.................................................................AATGGCACTGCAAGAATTCACGGG.................................................................................................... 24 1 1 76.00 76 10 58 5 1 1 1
.................................................................AATGGCACTGGAAGAATTCACC...................................................................................................... 22 1 1 75.00 75 53 0 2 5 14 1
.................................................................AAGGGCACTGGAAGAATTCA........................................................................................................ 20 1 1 70.00 70 69 0 0 1 0 0
.................................................................AATGGCACTGGAAGCATTCA........................................................................................................ 20 1 1 70.00 70 58 0 1 0 10 1
.................................................................AATGGCACTGGAAGGATTCAC....................................................................................................... 21 1 1 70.00 70 61 0 0 0 7 2
.................................................................AATGGCACTGGAAGCATTCACGGG.................................................................................................... 24 1 1 68.00 68 40 3 2 0 7 16
.................................................................AATGGCAATGGAAGAATTCAC....................................................................................................... 21 1 1 68.00 68 60 0 3 0 4 1
.................................................................AAAGGCACTGGAAGAATTCAC....................................................................................................... 21 1 1 68.00 68 63 0 0 0 5 0
.................................................................AATGGCACAGGAAGAATTCACG...................................................................................................... 22 1 1 67.00 67 7 0 0 60 0 0
.................................................................AATGGCACTGGAAGAATTCAT....................................................................................................... 21 1 1 67.00 67 57 0 2 1 5 2
.................................................................AATGGCACTGGGAGAATTCA........................................................................................................ 20 1 1 66.00 66 60 0 1 0 4 1
.................................................................AATGGCACTGGAAGAATTCACAGG.................................................................................................... 24 1 1 66.00 66 14 14 10 13 8 7
.................................................................AATGGCACGGGAAGAATTCA........................................................................................................ 20 1 1 64.00 64 28 0 2 32 1 1
.................................................................AATGGCACTGGAAGAATTCACGGGC................................................................................................... 25 1 1 64.00 64 16 12 21 8 3 4
.....................................................................GCACTGGAAGAATTCACGGG.................................................................................................... 20 0 1 64.00 64 0 53 5 4 2 0
.................................................................AATGCCACTGGAAGAATTCACGGG.................................................................................................... 24 1 1 62.00 62 5 44 8 3 1 1
..................................................................ATGGCACTGGAAGAATTCACGGGT................................................................................................... 24 1 1 60.00 60 1 0 5 54 0 0
.................................................................AATGGCACTGGAAGACTTCAC....................................................................................................... 21 1 1 60.00 60 54 0 0 0 5 1
.................................................................AATGGCACTGGAAGAATTCACGGTT................................................................................................... 25 2 1 60.00 60 18 0 36 4 2 0
.................................................................AGTGGCACTGGAAGAATTCACGGG.................................................................................................... 24 1 1 59.00 59 12 38 4 4 0 1
.................................................................AATGGCACTGGTAGAATTCAC....................................................................................................... 21 1 1 58.00 58 56 1 0 0 0 1
.................................................................AATGGCACCGGAAGAATTCACG...................................................................................................... 22 1 1 58.00 58 26 0 3 28 1 0
.................................................................AATGGCACTGGAAGCATTCACG...................................................................................................... 22 1 1 57.00 57 43 0 0 0 10 4
.................................................................AATGGCACTGGAAGAATTCCC....................................................................................................... 21 1 1 56.00 56 39 0 1 0 15 1
.................................................................AATGGCAATGGAAGAATTCACG...................................................................................................... 22 1 1 56.00 56 54 0 0 1 1 0
.................................................................AATGGCACTGGGAGAATTCACGGG.................................................................................................... 24 1 1 56.00 56 29 8 5 0 5 9
.................................................................AATAGCACTGGAAGAATTCACGGG.................................................................................................... 24 1 1 55.00 55 8 35 8 1 2 1
.................................................................AATGGCGCTGGAAGAATTCACGGG.................................................................................................... 24 1 1 55.00 55 15 28 1 8 0 3
.................................................................AATGGCACCGGAAGAATTCAC....................................................................................................... 21 1 1 55.00 55 33 0 1 17 4 0
.................................................................AATGGCACTGGAAGAATTCGCGGG.................................................................................................... 24 1 1 55.00 55 21 18 9 4 2 1
.................................................................AATGGCACTGGAAGAATTCTC....................................................................................................... 21 1 1 53.00 53 50 0 0 1 1 1
.................................................................AATGGCACAGGAAGAATTCAC....................................................................................................... 21 1 1 50.00 50 9 0 0 40 1 0
.................................................................AACGGCACTGGAAGAATTCACGGG.................................................................................................... 24 1 1 49.00 49 21 13 8 1 2 4
.................................................................AATGGCACTGGCAGAATTCACGGG.................................................................................................... 24 1 1 49.00 49 26 2 1 0 2 18
.................................................................AATGGAACTGGAAGAATTCAC....................................................................................................... 21 1 1 47.00 47 28 0 2 1 16 0
.................................................................AATGGCACTGGAAGAATTCACGC..................................................................................................... 23 1 1 47.00 47 36 5 1 2 3 0
.................................................................AATGGCACTGGAAGAACTCAC....................................................................................................... 21 1 1 47.00 47 40 0 0 0 7 0
.................................................................AATGGCACTGGACGAATTCACGGG.................................................................................................... 24 1 1 46.00 46 14 28 0 0 0 4
.................................................................AATGGCACCGGAAGAATTCACGG..................................................................................................... 23 1 1 46.00 46 4 2 3 37 0 0
.................................................................AATGGCACTGGAAGAATGCAC....................................................................................................... 21 1 1 45.00 45 42 0 0 0 3 0
.................................................................AATGGCACTGGAAGAATTCCCGGG.................................................................................................... 24 1 1 45.00 45 9 25 1 0 4 6
.................................................................AATGGCACTGGAAGAATGCACG...................................................................................................... 22 1 1 44.00 44 40 0 0 0 4 0
.................................................................AATGGCACTGGAAGAATTCACGA..................................................................................................... 23 1 1 44.00 44 22 1 5 7 9 0
.................................................................AATGGCACTGGAAGAATTCATGGG.................................................................................................... 24 1 1 44.00 44 11 18 7 4 0 4
.................................................................AATGGCACTGGAAGAATTCTCG...................................................................................................... 22 1 1 44.00 44 39 0 0 0 4 1
.................................................................AATGGCACTGGAAGAATTCT........................................................................................................ 20 1 1 44.00 44 36 0 2 2 4 0
.................................................................GATGGCACTGGAAGAATTCACGG..................................................................................................... 23 1 1 44.00 44 4 4 15 18 2 1
.................................................................AATTGCACTGGAAGAATTCACGG..................................................................................................... 23 1 1 41.00 41 2 26 9 4 0 0
.................................................................AATGGCACTGGAAGAATTT......................................................................................................... 19 1 1 41.00 41 25 0 13 2 1 0
.................................................................AATGGCACTGGAAGGATTCACGGG.................................................................................................... 24 1 1 41.00 41 17 9 3 1 3 8
.................................................................TATGGCACTGGTAGAATTCACT...................................................................................................... 22 3 1 40.00 40 0 40 0 0 0 0
.................................................................AATGGCACTGGAAGAATTCCCG...................................................................................................... 22 1 1 40.00 40 29 1 0 0 8 2
.................................................................AATGACACTGGAAGAATTCAC....................................................................................................... 21 1 1 39.00 39 34 0 2 0 3 0
...................................................................AATCACTGGAAGAATTCACGGG.................................................................................................... 22 3 1 39.00 39 0 39 0 0 0 0
.................................................................AATGGCACTGGATGAATTCA........................................................................................................ 20 1 1 39.00 39 37 0 0 0 2 0
.................................................................AATCGCACTGGAAGAATTCACG...................................................................................................... 22 1 1 38.00 38 29 5 0 1 2 1
.................................................................AATGGCACTGGAAGAAGTCAC....................................................................................................... 21 1 1 37.00 37 34 0 0 0 2 1
.................................................................AATGGCACTGCAAGAATTCAC....................................................................................................... 21 1 1 37.00 37 33 0 1 0 3 0
.................................................................AATAGCACTGGAAGAATTCAC....................................................................................................... 21 1 1 37.00 37 20 0 5 1 11 0
.................................................................AATGTCACTGGAAGAATTCAC....................................................................................................... 21 1 1 37.00 37 8 17 8 0 3 1
.................................................................AATGGCACTGGAAGAATCCAC....................................................................................................... 21 1 1 37.00 37 29 1 5 0 2 0
.................................................................AATGGCACTGGAGGAATTCA........................................................................................................ 20 1 1 37.00 37 28 0 1 0 8 0
.................................................................AATGGCACTGGAAGAATTAAC....................................................................................................... 21 1 1 37.00 37 28 0 0 1 6 2
...................................................................TGGCACTGGAAGAATTCACGG..................................................................................................... 21 0 1 36.00 36 1 1 1 33 0 0
.................................................................AATGGCGCTGGAAGAATTCAC....................................................................................................... 21 1 1 36.00 36 30 1 0 0 5 0
.................................................................AATGGCGCTGGAAGAATTCACG...................................................................................................... 22 1 1 36.00 36 28 0 2 4 2 0
.................................................................AATGGCACTGGAACAATTCAC....................................................................................................... 21 1 1 36.00 36 32 0 2 1 1 0
.................................................................AATGGCACTGGAAGACTTCA........................................................................................................ 20 1 1 35.00 35 30 0 0 0 5 0
......................................................................CACTGGAAGAATTCACGGG.................................................................................................... 19 0 1 35.00 35 0 30 2 1 0 2
.................................................................AATGGCACTGGAAGAATTCGC....................................................................................................... 21 1 1 35.00 35 27 0 4 1 3 0
.................................................................AATGGCACTGGAAGTATTCAC....................................................................................................... 21 1 1 35.00 35 31 0 1 0 2 1
.................................................................AATGGCACTCGAAGAATTCAC....................................................................................................... 21 1 1 35.00 35 33 0 0 0 2 0
.................................................................AATTGCACTGGAAGAATTCAC....................................................................................................... 21 1 1 35.00 35 10 20 5 0 0 0
.................................................................AATGGCACTGGAAGAGTTCAC....................................................................................................... 21 1 1 35.00 35 26 0 2 0 6 1
.................................................................AATGGCACTGGAAGAATTCACCG..................................................................................................... 23 1 1 35.00 35 27 0 2 3 2 1
.................................................................AATGGCACTGGAAGAATTCACTG..................................................................................................... 23 1 1 34.00 34 14 0 7 11 2 0
.................................................................AATGGCACTGGAAGGATTCA........................................................................................................ 20 1 1 34.00 34 32 0 0 0 2 0
.................................................................AATGGCACTGGAGGAATTCAC....................................................................................................... 21 1 1 34.00 34 28 0 1 2 3 0
.................................................................AATGTCACTGGAAGAATTCACG...................................................................................................... 22 1 1 34.00 34 4 18 7 1 3 1
.................................................................AATGGCACTGGTAGAATTCA........................................................................................................ 20 1 1 34.00 34 33 0 0 0 1 0
.................................................................AACGGCACTGGAAGAATTCAC....................................................................................................... 21 1 1 34.00 34 28 0 2 0 4 0
.................................................................AATGGCACTGGAAGAATTCATG...................................................................................................... 22 1 1 33.00 33 27 0 3 1 2 0
.................................................................AATGGCACTGGAAGAATTCGCG...................................................................................................... 22 1 1 33.00 33 23 0 3 2 4 1
.................................................................AATGGCACTGCATGAATTCACGG..................................................................................................... 23 2 1 33.00 33 0 33 0 0 0 0
...................................................................TGGCACTGGAAGAATTCACG...................................................................................................... 20 0 1 33.00 33 1 0 0 31 1 0
.................................................................AATGGCACTGGACGAATTCAC....................................................................................................... 21 1 1 33.00 33 30 0 0 0 3 0
.................................................................AAAGGCACTGGAAGAATTCACGGG.................................................................................................... 24 1 1 32.00 32 21 2 1 2 1 5
.................................................................AATGCCACTGGAAGAATTCAC....................................................................................................... 21 1 1 32.00 32 22 1 1 2 6 0
.................................................................AATGTCACTGGAAGAATTCACGG..................................................................................................... 23 1 1 32.00 32 1 24 4 1 2 0
.................................................................AATGGCACTGGAAGACTTCACG...................................................................................................... 22 1 1 31.00 31 24 0 0 0 4 3
.................................................................AATGGCACTGGCAGAATTCACGG..................................................................................................... 23 1 1 31.00 31 28 0 0 0 2 1
.................................................................AATGGAACTGGAAGAATTCA........................................................................................................ 20 1 1 31.00 31 22 0 2 0 7 0
.................................................................AATGGCACTGGAAGAATTAA........................................................................................................ 20 1 1 31.00 31 23 0 0 0 8 0
.................................................................AATGGCACTGGAGGAATTCACGG..................................................................................................... 23 1 1 31.00 31 3 16 7 4 0 1
..................................................................AATGCACTGGAAGAATTCACGG..................................................................................................... 22 2 1 31.00 31 0 22 5 4 0 0
.................................................................AATGGCACTGAAAGAATTCACGGG.................................................................................................... 24 1 1 31.00 31 4 20 1 3 2 1
.................................................................AATGACACTGGAAGAATTCACG...................................................................................................... 22 1 1 31.00 31 25 0 0 0 4 2
.................................................................AATGGCAGTGGAAGAATTCAC....................................................................................................... 21 1 1 31.00 31 28 0 0 0 3 0
.................................................................AATGGCACTGGAAGAATGCACGGG.................................................................................................... 24 1 1 30.00 30 25 0 1 0 2 2
.................................................................AATGACACTGGAAGAATTCACGGG.................................................................................................... 24 1 1 30.00 30 6 11 8 1 1 3
.................................................................AATGGCACTTGAAGAATTCACGGG.................................................................................................... 24 1 1 30.00 30 3 19 3 3 0 2
.................................................................AATCGCACTGGAAGAATTCAC....................................................................................................... 21 1 1 30.00 30 26 1 1 1 1 0
.................................................................AATGGCACTGGAAAAATTCACGGG.................................................................................................... 24 1 1 29.00 29 6 16 2 3 1 1
.................................................................AATGGCACCGGAAGAATTCA........................................................................................................ 20 1 1 29.00 29 18 0 3 7 1 0
.................................................................AATGGCACTGGAAGAATTCACGAG.................................................................................................... 24 1 1 29.00 29 10 4 5 1 5 4
.................................................................GATGGCACTGGAAGAATTCACG...................................................................................................... 22 1 1 29.00 29 13 0 4 9 3 0
.................................................................AATGCCACTGGAAGAATTCACG...................................................................................................... 22 1 1 29.00 29 17 5 1 1 5 0
.................................................................AATGGCACTGGAATAATTCACGGG.................................................................................................... 24 1 1 29.00 29 4 15 8 0 2 0
.................................................................AATGGAACTGGAAGAATTCACG...................................................................................................... 22 1 1 29.00 29 18 0 1 1 8 1
....................................................................GGCACTGGAAGAATTCACGGG.................................................................................................... 21 0 1 29.00 29 1 2 3 19 0 4
.................................................................AATGGCACTGGAAGAATTCC........................................................................................................ 20 1 1 28.00 28 21 0 0 1 6 0
.................................................................AATGGCACTGGAGGAATTCACG...................................................................................................... 22 1 1 28.00 28 17 2 1 4 3 1
.................................................................AATGGCACTGGAAGTATTCACGGG.................................................................................................... 24 1 1 28.00 28 19 0 0 0 2 7
.................................................................AATGGCACTCGAAGAATTCA........................................................................................................ 20 1 1 28.00 28 22 0 0 0 6 0
.................................................................AATGGCATTGGAAGAATTCAC....................................................................................................... 21 1 1 27.00 27 23 0 0 1 3 0
.................................................................AATGGTACTGGAAGAATTCAC....................................................................................................... 21 1 1 27.00 27 14 0 1 1 11 0
.................................................................AATGGCACTGGAAGAATTCG........................................................................................................ 20 1 1 27.00 27 24 0 0 0 3 0
.................................................................AATGGCACTGGAAGAGTTCACG...................................................................................................... 22 1 1 27.00 27 19 0 2 4 1 1
.................................................................AATGGCACTCGAAGAATTCACGGG.................................................................................................... 24 1 1 27.00 27 7 9 6 4 1 0
.................................................................AATGGCACTAGAAGAATTCACGGG.................................................................................................... 24 1 1 26.00 26 4 12 2 1 3 4
.................................................................AATGGGACTGGAAGAATTCAC....................................................................................................... 21 1 1 26.00 26 18 1 1 1 5 0
.................................................................AATGGCACTGGGAGAATTCACG...................................................................................................... 22 1 1 26.00 26 23 0 1 1 1 0
.................................................................AATGGCACTGGAAGTATTCA........................................................................................................ 20 1 1 26.00 26 22 0 0 0 3 1
.................................................................AATGGCACTGCAAGAATTCA........................................................................................................ 20 1 1 26.00 26 22 0 0 1 3 0
.................................................................AATGGCACTGGAAGAATCCACG...................................................................................................... 22 1 1 26.00 26 16 0 4 1 5 0
.................................................................AATGGCACTGGAAGAATTCATGG..................................................................................................... 23 1 1 26.00 26 10 4 7 3 2 0
.................................................................AATGGCAGTGGAAGAATTCACG...................................................................................................... 22 1 1 26.00 26 22 0 0 1 2 1
.................................................................AATGGCACTGAAAGAATTCAC....................................................................................................... 21 1 1 25.00 25 16 0 0 4 4 1
.................................................................AAAGGCACTGGAAGAATTCACG...................................................................................................... 22 1 1 25.00 25 23 0 0 0 2 0
.................................................................TATGGCACTGGAAGAATTCAC....................................................................................................... 21 1 1 25.00 25 20 0 2 2 1 0
.................................................................AATGGTACTGGAAGAATTCACGGG.................................................................................................... 24 1 1 25.00 25 7 8 3 2 5 0
.................................................................TATGGCACTGGAAGAATTCACG...................................................................................................... 22 1 1 25.00 25 22 0 1 0 2 0
................................................................CAATGGCACTGGAAGAATTCACGGG.................................................................................................... 25 1 1 25.00 25 6 3 10 5 0 1
.................................................................AATGGCACTGGAAGAATTCTCGGG.................................................................................................... 24 1 1 25.00 25 15 5 1 0 0 4
.................................................................AATGGCACTGGAAGAATTCGCGG..................................................................................................... 23 1 1 24.00 24 8 4 8 2 1 1
.................................................................GATGGCACTGGAAGAATTCAC....................................................................................................... 21 1 1 24.00 24 15 0 3 5 1 0
.................................................................AGTGGCACTGGAAGAATTCACGG..................................................................................................... 23 1 1 24.00 24 11 9 2 1 1 0
.................................................................AATGGCACTGGAAGAATTAACG...................................................................................................... 22 1 1 24.00 24 15 0 1 1 6 1
.................................................................AAGGGCACGGGAAGAATTCAC....................................................................................................... 21 2 1 24.00 24 24 0 0 0 0 0
.................................................................AGTGGCACTGGAAGAATTCAC....................................................................................................... 21 1 1 24.00 24 21 0 0 0 3 0
.................................................................AATTGCACTGGAAGAATTCACG...................................................................................................... 22 1 1 24.00 24 4 12 2 3 3 0
.................................................................AATGGCACTGGAACAATTCACGGG.................................................................................................... 24 1 1 24.00 24 6 12 1 4 1 0
.................................................................AATGGCACTGGAAGAATTCAAG...................................................................................................... 22 1 1 24.00 24 15 0 0 0 8 1
.................................................................AACGGCACTGGAAGAATTCACG...................................................................................................... 22 1 1 24.00 24 16 0 2 1 5 0
.................................................................AATGGCACTAGAAGAATTCAC....................................................................................................... 21 1 1 23.00 23 12 0 0 0 10 1
.................................................................AATGGCACTGGACGAATTCA........................................................................................................ 20 1 1 23.00 23 19 0 0 0 4 0
.................................................................AATGGCACTGGAAGAGTTCACGGG.................................................................................................... 24 1 1 23.00 23 5 6 6 3 1 2
.................................................................AATGGCACTGGAAGAAGTCACGGG.................................................................................................... 24 1 1 23.00 23 14 0 1 0 2 6
.................................................................AATGGCACTGGAAGAATTCAAGGG.................................................................................................... 24 1 1 23.00 23 4 10 1 1 4 3
.................................................................AATGGCACTGGCAGAATTCACG...................................................................................................... 22 1 1 23.00 23 19 0 0 0 3 1
.................................................................AATGGCACTGGGAGAATTCACGG..................................................................................................... 23 1 1 22.00 22 14 0 5 1 2 0
.................................................................AAGGGCACTGGAAGAATTCACGG..................................................................................................... 23 1 1 22.00 22 19 3 0 0 0 0
.................................................................AATGGCACTGGAAGGATTCACG...................................................................................................... 22 1 1 22.00 22 16 0 0 2 3 1
.................................................................AATGGCACTAGAAGAATTCA........................................................................................................ 20 1 1 22.00 22 12 0 0 0 10 0
.................................................................AATGGCACTGGAAGAACTCACGGG.................................................................................................... 24 1 1 22.00 22 8 4 4 1 3 2
.................................................................AATGGCACTGGAAGAATTTACGGG.................................................................................................... 24 1 1 22.00 22 8 4 3 5 1 1
.................................................................AATAGCACTGGAAGAATTCA........................................................................................................ 20 1 1 21.00 21 12 0 6 0 3 0
.................................................................AATGGAACTGGAAGAATTCACGGG.................................................................................................... 24 1 1 21.00 21 5 3 4 2 5 2
.................................................................AATGGCACTGGAAGAAATCAC....................................................................................................... 21 1 1 21.00 21 19 0 0 0 2 0
.................................................................AATGGCACTGGAAGAACTCACG...................................................................................................... 22 1 1 21.00 21 17 0 2 0 2 0
.................................................................AATGGCACTGGAAGAATTCACAG..................................................................................................... 23 1 1 21.00 21 9 2 3 5 2 0
.................................................................AATGGCACTGGATGAATTCAC....................................................................................................... 21 1 1 20.00 20 20 0 0 0 0 0
.................................................................AATGGCACTGTAAGAATTCACGG..................................................................................................... 23 1 1 20.00 20 2 8 4 4 2 0
.................................................................AATGGCCCTGGAAGAATTCAC....................................................................................................... 21 1 1 20.00 20 15 0 1 0 4 0
.................................................................AATGGCACTGGAAGAATTAACGGG.................................................................................................... 24 1 1 20.00 20 6 10 0 0 3 1
.................................................................AATGGCACTGGAAGAACTCA........................................................................................................ 20 1 1 20.00 20 18 0 0 0 2 0
.................................................................AATGGCACTGGAAGAATTCACGTT.................................................................................................... 24 2 1 20.00 20 13 0 5 2 0 0
.................................................................AATGGCACTGGAAGAATGCA........................................................................................................ 20 1 1 20.00 20 17 0 0 0 2 1
.................................................................AAGGGCACGGGAAGAATTCA........................................................................................................ 20 2 1 20.00 20 20 0 0 0 0 0
...................................................................TGGCACTGGAAGAATTCAC....................................................................................................... 19 0 1 19.00 19 0 0 0 19 0 0
.................................................................AATGGCACTGAAAGAATTCACG...................................................................................................... 22 1 1 19.00 19 11 2 0 2 4 0
.................................................................AATGGCAATGGAAGAATTCACGGG.................................................................................................... 24 1 1 19.00 19 12 1 0 0 1 5
.................................................................AATCGCACTGGAAGAATTCA........................................................................................................ 20 1 1 19.00 19 16 0 0 1 2 0
.................................................................AATGGCACTGCAAGAATTCACG...................................................................................................... 22 1 1 19.00 19 15 0 1 1 2 0
.................................................................AATGACACTGGAAGAATTCA........................................................................................................ 20 1 1 19.00 19 17 0 0 0 2 0
.................................................................AATGGCACTGGAAGAGTTCA........................................................................................................ 20 1 1 18.00 18 16 0 0 0 2 0
.................................................................AATGGCACTGGAAGAATTCACGGTTT.................................................................................................. 26 2 1 18.00 18 4 0 12 2 0 0
.................................................................AATGGCACGGGAAGAATTCACGGGT................................................................................................... 25 2 1 18.00 18 1 0 1 16 0 0
.................................................................AATAGCACTGGAAGAATTCACGG..................................................................................................... 23 1 1 18.00 18 1 7 6 3 1 0
.................................................................AATGGCACTGGATGAATTCACGGG.................................................................................................... 24 1 1 18.00 18 9 7 1 0 1 0
.................................................................AATGGCACTGGAAGAATTCAG....................................................................................................... 21 1 1 18.00 18 14 0 0 0 4 0
.................................................................AGTGGCACTGGAAGAATTCACG...................................................................................................... 22 1 1 18.00 18 11 0 2 4 1 0
.................................................................AATGGCACTGGTAGAATTCACG...................................................................................................... 22 1 1 18.00 18 14 0 0 0 1 3
.................................................................AATGGCATTGGAAGAATTCA........................................................................................................ 20 1 1 18.00 18 16 0 2 0 0 0
.................................................................AATGGCACTGGAAGACTTCACGGG.................................................................................................... 24 1 1 18.00 18 14 0 0 0 1 3
.................................................................AATGGCGCTGGAAGAATTCA........................................................................................................ 20 1 1 18.00 18 15 0 0 1 2 0
.................................................................AATGGCACTGGAAGAATTTAC....................................................................................................... 21 1 1 18.00 18 13 0 3 0 2 0
.................................................................AATTGCACTGGAAGAATTCACGGGA................................................................................................... 25 2 1 18.00 18 0 17 1 0 0 0
.................................................................CATGGCACTGGAAGAATTCACGGG.................................................................................................... 24 1 1 17.00 17 2 10 4 1 0 0
.................................................................AACGGCACTGGAAGAATTCA........................................................................................................ 20 1 1 17.00 17 15 0 0 0 2 0
.................................................................AATGGCGCTGGAAGAATTCACGG..................................................................................................... 23 1 1 17.00 17 4 3 4 5 1 0
.................................................................AATGGCACTGGAAGAATCCACGGG.................................................................................................... 24 1 1 17.00 17 7 2 3 1 3 1
.................................................................CATGGCACTGGAAGAATTCAC....................................................................................................... 21 1 1 17.00 17 6 0 9 1 1 0
.................................................................AATCGCACTGGAAGAATTCACGG..................................................................................................... 23 1 1 17.00 17 5 3 4 4 1 0
.................................................................AATGGCACTGGAAGAATACAC....................................................................................................... 21 1 1 17.00 17 14 0 0 0 3 0
.................................................................AATGGCACTGGAAGGATTCACGG..................................................................................................... 23 1 1 17.00 17 10 2 1 1 1 2
....................................................................GGCACTGGAAGAATTCACGG..................................................................................................... 20 0 1 17.00 17 1 1 5 8 0 2
.................................................................GATGGCACTGGAAGAATTCA........................................................................................................ 20 1 1 17.00 17 12 0 1 3 1 0
.................................................................AATGGCACTGGAAGGATTC......................................................................................................... 19 1 1 17.00 17 14 0 0 0 3 0
.................................................................AATGGCTCTGGAAGAATTCAC....................................................................................................... 21 1 1 17.00 17 15 0 0 0 2 0
.................................................................AATGGCACTGGAAGAATACACG...................................................................................................... 22 1 1 17.00 17 9 0 3 0 5 0
.................................................................AATGGCACTGGAAGCATTCACGG..................................................................................................... 23 1 1 17.00 17 14 0 0 0 2 1
.................................................................AATGGAACTGGAAGAATTCACGG..................................................................................................... 23 1 1 16.00 16 9 1 2 2 1 1
.................................................................AATGGCACTGGAAGATTTCAC....................................................................................................... 21 1 1 16.00 16 15 0 0 0 1 0
.................................................................AATGGCACTGGAAGAATTGACG...................................................................................................... 22 1 1 16.00 16 10 1 2 1 2 0
.................................................................AATGGCACTGGAAGTATTCACG...................................................................................................... 22 1 1 16.00 16 14 0 0 0 0 2
.................................................................AATGGCACTGGAACAATTCA........................................................................................................ 20 1 1 16.00 16 14 0 1 0 1 0
.................................................................AATGGCAGTGGAAGAATTCACGGG.................................................................................................... 24 1 1 16.00 16 10 2 3 0 0 1
.................................................................AATGGCACAGGAAGAATTCA........................................................................................................ 20 1 1 16.00 16 3 0 1 12 0 0
.................................................................AATGGCACTGGAAGAATTCCCGG..................................................................................................... 23 1 1 16.00 16 6 7 0 0 1 2
..................................................................AATGCACTGGAAGAATTCAC....................................................................................................... 20 2 1 16.00 16 1 7 5 3 0 0
.................................................................AATGGCACTGGAATAATTCAC....................................................................................................... 21 1 1 16.00 16 10 0 3 0 3 0
................................................................CAATGGCACTGGAAGAATTCACGG..................................................................................................... 24 1 1 16.00 16 6 0 3 5 2 0
.................................................................AATGGCACTGGAAGAATTCACCTG.................................................................................................... 24 2 1 15.00 15 10 0 2 0 1 2
.................................................................AATGGCACTGGAAGAACTCACGG..................................................................................................... 23 1 1 15.00 15 12 1 1 0 1 0
.................................................................AATGGCACTGGAAGAGTTCACGG..................................................................................................... 23 1 1 15.00 15 6 1 5 0 3 0
.................................................................AATGGCACTGGAAGAATTCACGCT.................................................................................................... 24 2 1 15.00 15 15 0 0 0 0 0
.................................................................AAGGGCACGGGAAGAATTCACG...................................................................................................... 22 2 1 15.00 15 15 0 0 0 0 0
.................................................................ACTGGCACTGGAAGAATTCAC....................................................................................................... 21 1 1 15.00 15 12 0 2 0 1 0
..................................................................ATGGCACTGGAAGAATTCACGGT.................................................................................................... 23 1 1 15.00 15 1 0 0 13 1 0
.................................................................AATGGCACTGGAAGAATTGAC....................................................................................................... 21 1 1 15.00 15 13 0 0 1 1 0
.................................................................AACGGCACTGGAAGAATTCACGG..................................................................................................... 23 1 1 15.00 15 5 2 4 2 2 0
.................................................................AATGGCACTGGAAGAATGCACGG..................................................................................................... 23 1 1 15.00 15 14 0 0 0 1 0
.................................................................AATGGCAGTGGAAGAATTCA........................................................................................................ 20 1 1 15.00 15 13 0 0 0 2 0
.................................................................AATAGCACTGGAAGAATTCACG...................................................................................................... 22 1 1 15.00 15 8 0 1 2 4 0
..................................................................ATGGCACTGGAAGAATTCACGGGA................................................................................................... 24 1 1 15.00 15 2 0 3 10 0 0
.........................................................................................................CGTGATCTCTTAGTGGCATC................................................................ 20 0 1 15.00 15 1 12 0 1 1 0
.................................................................AATGGCTCTGGAAGAATTCACG...................................................................................................... 22 1 1 14.00 14 11 0 0 2 1 0
.................................................................AATGACACTGGAAGAATTCACGG..................................................................................................... 23 1 1 14.00 14 6 3 4 1 0 0
.................................................................AATGGCACTGGAAGCATTC......................................................................................................... 19 1 1 14.00 14 10 0 0 0 3 1
.................................................................AATGGCACTGGAAGAATTCACGGCT................................................................................................... 25 2 1 14.00 14 11 1 2 0 0 0
.................................................................AATGGGACTGGAAGAATTCACG...................................................................................................... 22 1 1 14.00 14 10 0 0 0 4 0
.................................................................AATGGCACTGGTAGAATTCACGGG.................................................................................................... 24 1 1 14.00 14 9 0 0 0 0 5
.................................................................AAAGGCACTGGAAGAATTCA........................................................................................................ 20 1 1 14.00 14 12 0 0 0 2 0
................................................................CAATGGCACTGGAAGAATTCAC....................................................................................................... 22 1 1 14.00 14 9 0 0 2 2 1
.................................................................AATGGCACTGGAAGAATTTACG...................................................................................................... 22 1 1 14.00 14 9 1 1 0 2 1
.................................................................AATGGTACTGGAAGAATTCACG...................................................................................................... 22 1 1 14.00 14 6 0 4 1 3 0
.................................................................AATGGCAATGGAAGAATTCA........................................................................................................ 20 1 2 13.50 27 25 0 0 0 2 0
.................................................................AATGGCACTTGAAGAATTCAC....................................................................................................... 21 1 1 13.00 13 11 0 0 1 1 0
..................................................................ATGGCACTAGAAGAATTCACGGG.................................................................................................... 23 1 1 13.00 13 0 0 0 13 0 0
.................................................................AATGGCACTGGAAGAAGTCACG...................................................................................................... 22 1 1 13.00 13 12 0 0 0 1 0
.................................................................ATTGGCACTGGAAGAATTCACG...................................................................................................... 22 1 1 13.00 13 11 0 0 2 0 0
.................................................................AATGGCACTGGAATAATTCACG...................................................................................................... 22 1 1 13.00 13 5 0 4 1 1 2
.................................................................AATGGCACTGGAAGAATCCA........................................................................................................ 20 1 2 13.00 26 24 0 1 0 1 0
.................................................................AATGGCACTAGAAGAATTCACGG..................................................................................................... 23 1 1 13.00 13 3 2 4 2 2 0
.................................................................AATGGCACTCGAAGAATTCACGG..................................................................................................... 23 1 1 13.00 13 10 0 1 1 1 0
.................................................................AATGGCACTGGCAGAATTC......................................................................................................... 19 1 1 12.00 12 11 0 0 0 1 0
.................................................................AGTGGCACTGGAAGAATTCA........................................................................................................ 20 1 1 12.00 12 11 0 0 0 1 0

Anti-sense strand reads

TTGATCAGTGTTTTCACTTTATTCTTCACTTTTTGAGTATTCACATAGGTGTAGGGCCGTGTCAATTACCGTGACCTTCTTAAGTGCCCCAAAAAGTTATGTTGGGCACTAGAGAATCACCGTAGATACCACGCCCTGAGTAGAGTTAGTTAGGGTTAGCGTTGGTTGCAACTATTAACACAATTACAC

***********************************************..(((((.(((.((..(((.((((((.(((..(((((((..............)))))))))).)))))).)))..)).)))))))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M021

embryo

 V111

male body		 V042

embryo

 V057

head
..................................................................................................................................................TGGTTAGGGGTAGGGTTGGTTG..................... 22 3 13 0.23 3 0 3 0 0
..........................................................ATGTCAATTAGCCTGACCTT............................................................................................................... 20 3 6 0.17 1 0 0 1 0
.............................................................................................................................................AGAGTTGGTTAGGCTTAGCA............................ 20 3 7 0.14 1 1 0 0 0
.............................................................................................................................................AGAGTTGGTTAGGCTTAG.............................. 18 2 11 0.09 1 1 0 0 0
...................................................................................................TGTCGGGCACTAGAGATC........................................................................ 18 3 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droPer2 scaffold_1:8768248-8768436 + dpe-mir-263a Known_mirbase AAC----TAGTCACA-------------------------------AAAGTGAAATAAGAAGTGAAAAA----CTC-ATAAGTGTATCCACATCCCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTT-TTTCAA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGACT----CA-------------------TC----------------TCAA---TCAATCCCAATC-----GCAACCA-A-CGTTGA---TAATTGTGTTAA----------T------G---------TG
dp5 4_group3:7322755-7322943 + dps-mir-263a Known_mirbase AAC----TAGTCACA-------------------------------AAAGTGAAATAAGAAGTGAAAAA----CTC-ATAAGTGTATCCACATCCCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTT-TTTCAA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGACT----CA-------------------TC----------------TCAA---TCAATCTCAATC-----GCAACCA-A-CGTTGA---TAATTGTGTTAA----------T------G---------TG
droWil2 scf2_1100000004521:2657701-2657841 - dwi-mir-263a Known_mirbase T--------------------------------------------------------------------------------------CTGCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTTTTATTTAACAC-ACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGATTTAAGCA-------------------TACAGAACATCCGACATCA-----------------------------A-G-TGTT-A-----ATTGTATATA----------T------A---------TA
droVir3 scaffold_12963:13235106-13235277 + dvi-mir-263a Known_mirbase T--------------------------------------------------------------------------------------CTGCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTTTTATAA--CAC-GCCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAT-ATTACGTACAACAAATGAAAGCTTCTC----------------T----------TCGT-ATT-----CTAGACA-T-GCTTCT---TAATTGTGTTAA----------TTGAGCCGTAAAAAACTTG
droMoj3 scaffold_6500:16780732-16780822 + dmo-mir-263a Known_mirbase T--------------------------------------------------------------------------------------TCGCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTTTTC-TA-ACAC-GCCCGTGATCTCTTAGTGGCATCTATGGTGCGGGA---------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15126:6621373-6621463 - dgr-mir-263a Known_mirbase T--------------------------------------------------------------------------------------CTGCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTATTTTAA--CAC-GCCCGTGATCTCTTAGTGGCATCTATGGTGCGGGA---------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_12943:2289672-2289862 + dan-mir-263a Known_mirbase AATA----------------------------ATAGGG--------TAAGTGGAAAA-AAAGTGAAA-----------CAA--GTTTCTCCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGATTAAAACA-------------------TC----------------AAAAAAGTGAACAAAA--------------A-A-CTCTGA---AAAGTGTGAAACTCTGAATATT-TCTACCG-----------
droBip1 scf7180000396728:1008446-1008633 - GAA----TGTATACA-------------------------------AAAATGAA----AAAGTGAAA-----------AAAATGTTTCTCCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGATTAAAACA-------------------TC----------------AAAAGAGTGAA------TACAAAAAAAACCA-A-TG--------AAAAGTGTTAA------TATT-TCTACCG-----------
droKik1 scf7180000301476:605740-605927 + TGA-----------------A--------ATTGTAAGACAAGATCT----------------------AAGATCTTGCAGAGTGTTAAACCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTATTTCTA--AACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAATTGAACA-------------------TC----------------CAATC--AGAATCAAAATCAA-AATCA---A-A-AGTT-A---TAAATGTGTTAA----------T------G---------TG
droFic1 scf7180000453936:232029-232196 + AAC----------------------------CAAAGAGCAAGATAT----------------------ATAATCTTGACAA--GTCACTCCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAATAAGACA-------------------TC----------------AAAT----CA----------------AATCAAA-AGCT-A---AGAATGTGATAA----------T------G-----------
droEle1 scf7180000491028:3218993-3219155 + AATA----------------------------------TAAAATAC----------------------TAGTTCTTG-AAAGTGTAACTCCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTCA--TACCACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAATAAAACA-------------------TC----------------AAAA---T-----------------CAATCA-ATGGTT-A---TAAATGTGTTAA----------T------G-----------
droRho1 scf7180000779410:469644-469832 - A---------------GTGAA--------TCCAAAGAATGAGATGC----------------------TCAATCTT-TAAAGTGTTACTACATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCTA--TACCACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAATAAAACA-------------------TC----------------CAAA---TGAACAAAGATTCA-AGTCAATCAAA-AGTT-----AAAACGTGTTAA----------T------A-----------
droBia1 scf7180000302422:1067930-1068114 + TACA--A--------AGT----------------------------AAAGTGAAAAATAAAGTGATATGC-----GATGAAG--T-----AATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTGATTT-TA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAACAAAACA-------------------AC----------------CACA---TGAAGCAAAATTCA-AATCAACCT-ATGGGT-A---AAAATGTGTTAA----------T------G-----------
droTak1 scf7180000415863:297037-297199 + TCA-TAA--------AGTGAA--------AACAAAGAACAAGATTT----------------------TC-----AATC--GTGT-----AATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTTA--TACAACCCGTGATCTCTTAGTGGCATTTATGGTGCGGGAATAAAACA-------------------TC----------------AAA-----------------------------A-AGTT-ACAAAAAATGTGTTAA----------T------G-----------
droEug1 scf7180000409122:345811-345983 - AATCTAA--------AGTGAA--------ATCAAAGAAGAAGTTGC----------------------AGAATCTTGTGAAGTGTTCAATCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGATTAAAACA-------------------TC----------------CAA-----------------------------A-AGTT-G---AAAAAGTATTAA----------T------A-----------
dm3 chr2L:11953354-11953537 - dme-mir-263a Known_mirbase AAC-----------------------AAG-----AAAAGTAAATAT----------------------ACCATCTAATG----GTATATAGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAAACA-------------------TC----------------CAAAA--TGAAACGAAATCCG-AAACTTTCA-A-AGTT-A---AAAATGTGCTAA----------T------G---------TA
droSim2 2l:11624670-11624859 - dsi-mir-263a Known_mirbase A---------------GTGACAAAAGAAG-----AAAAGAAAATAT----------------------ACCATCTAATG----GTATATAGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAAACA-------------------TC----------------CAAAA--TGAAACGAAATCCA-AAACAATCA-A-AGTT-A---AAAACGTGCTAA----------T------G-----------
droSec2 scaffold_16:152645-152828 - dse-mir-263a Known_mirbase AA-------------AGTGACAAAACAAG-----GA--------AT----------------------ACCTTCTAATG----GTATATAGATCTCGACACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAAACA-------------------TC----------------CAAAG--TGAAACGAAATCCG-AAACAATCA-A-AGTT-A---AAAATGTGCTAA----------T------G-----------
droYak3 2L:8374779-8374967 - dya-mir-263a Known_mirbase A---------------GTGACAAAACAAG-----AAAAGCAAATAT----------------------ACCAGCTGCTG----GTATATAGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTACTTTTTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAAACA-------------------TC----------------CAAA---TGAAACAAAATCCA-AATGAATCT-A-AGCT-G---AAAATGTGCTAA----------T------G-----------
droEre2 scaffold_4929:13456416-13456594 + der-mir-263a Known_mirbase CAA-------------------------A-----AAAAGTAAATAT----------------------GCCATCTGATG----GTGTATAGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTACTTTTGA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAAACA-------------------TC----------------CGAA---TGAAACGAAATCCA-AAGCAATCA-A-AGTT-A---AAAATGTGCTAA----------T------G-----------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
AAC----TAGTCACA-------------------------------AAAGTGAAATAAGAAGTGAAAAA----CTC-ATAAGTGTATCCACATCCCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTT-TTTCAA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGACT----CA-------------------TC----------------TCAA---TCAATCCCAATC-----GCAACCA-A-CGTTGA---TAATTGTGTTAA----------T------G---------TGSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.........................................................................................................AATGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................24166268.006626835125933822851883691510722
.........................................................................................................AATGGCACTGGAAGAATTCAC.......................................................................................................................................................................................21124570.002457032019581624308147603062
.........................................................................................................AATGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................23121305.00213055813471530486438705739
.........................................................................................................AATGGCACTGGAAGAATTCACG......................................................................................................................................................................................22119534.00195346064055349293889322654
.........................................................................................................AATGGCACTGGAAGAATTCA........................................................................................................................................................................................20112871.00128712488673247679331479
.........................................................................................................AATGGCACTGGAAGAATTCACGGGT...................................................................................................................................................................................2513199.003199158444611127101714
.........................................................................................................AATGGCACTGGAAGAATTC.........................................................................................................................................................................................1912585.002585278584031647415
.........................................................................................................AATGGCACTGGAAGAATTCACGGGA...................................................................................................................................................................................2511525.0015259521113343173213
..........................................................................................................ATGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................2311136.001136721005192425
.........................................................................................................AATGGCACTGGAAGAATTCACGGT....................................................................................................................................................................................241607.00607793553202247
..........................................................................................................ATGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................221554.005549513031514
....................................................................................................................................................CGTGATCTCTTAGTGGCATCTA...........................................................................................................................................221537.005373645646105011
.........................................................................................................AATGGCACTGGAAGAATTCACGT.....................................................................................................................................................................................231464.00464369162219110
..........................................................................................................ATGGCACTGGAAGAATTCACG......................................................................................................................................................................................211455.004550416110244
.........................................................................................................AATGGCACTGGAAGAATTCACA......................................................................................................................................................................................221352.0035212536323822
..........................................................................................................ATGGCACTGGAAGAATTCAC.......................................................................................................................................................................................201245.0024512221795
.........................................................................................................AATGGCACTGGAAGAATTCACT......................................................................................................................................................................................221148.001482112209815
.........................................................................................................AATGGCACTGGAAGAATTCACGGGG...................................................................................................................................................................................251138.0013812430056
.........................................................................................................AATGGCACTGGAAGAATTCAA.......................................................................................................................................................................................211132.0013205227971
.........................................................................................................AATGGCACTGGAAGAATT..........................................................................................................................................................................................181128.00128211118915
.........................................................................................................AATGGCACTGGAAGAATTCACGGC....................................................................................................................................................................................241128.001283214184924
....................................................................................................................................................CGTGATCTCTTAGTGGCATCT............................................................................................................................................211115.0011578862183
..........................................................................................................ATGGCACTGGAAGAATTCA........................................................................................................................................................................................191112.0011209703102
.........................................................................................................AATGGCACTGGAAGAATTCACGGA....................................................................................................................................................................................241102.001022925191424
.........................................................................................................AATGGCACTGGAAGAATTCACGGGAA..................................................................................................................................................................................26183.00837620041
...........................................................................................................TGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................22181.00818670105
.........................................................................................................AATGGCACTGGAAGAATTCACC......................................................................................................................................................................................22175.007505114532
.........................................................................................................AATGGCACTGGAAGAATTCAT.......................................................................................................................................................................................21167.00670125572
.........................................................................................................AATGGCACTGGAAGAATTCACGGGC...................................................................................................................................................................................25164.0064128431621
.............................................................................................................GCACTGGAAGAATTCACGGG....................................................................................................................................................................................20164.00645340205
..........................................................................................................ATGGCACTGGAAGAATTCACGGGT...................................................................................................................................................................................24160.00600540015
.........................................................................................................AATGGCACTGGAAGAATTCACGGTT...................................................................................................................................................................................25160.006004021836
.........................................................................................................AATGGCACTGGAAGAATTCACGC.....................................................................................................................................................................................23147.00475203361
.........................................................................................................AATGGCACTGGAAGAATTCACGA.....................................................................................................................................................................................23144.00441709225
.........................................................................................................AATGGCACTGGAAGAATTCT........................................................................................................................................................................................20144.00440204362
.........................................................................................................AATGGCACTGGAAGAATTT.........................................................................................................................................................................................19141.004102012513
...........................................................................................................TGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................21136.00361330011
..............................................................................................................CACTGGAAGAATTCACGGG....................................................................................................................................................................................19135.00353012002
...........................................................................................................TGGCACTGGAAGAATTCACG......................................................................................................................................................................................20133.00330310110
............................................................................................................GGCACTGGAAGAATTCACGGG....................................................................................................................................................................................21129.00292194013
.........................................................................................................AATGGCACTGGAAGAATTCC........................................................................................................................................................................................20128.00280106210
.........................................................................................................AATGGCACTGGAAGAATTCG........................................................................................................................................................................................20127.00270003240
.........................................................................................................AATGGCACTGGAAGAATTCACGTT....................................................................................................................................................................................24120.00200200135
...........................................................................................................TGGCACTGGAAGAATTCAC.......................................................................................................................................................................................19119.00190190000
.........................................................................................................AATGGCACTGGAAGAATTCAG.......................................................................................................................................................................................21118.00180004140
............................................................................................................GGCACTGGAAGAATTCACGG.....................................................................................................................................................................................20117.0017182015
.........................................................................................................AATGGCACTGGAAGAATTCACGCT....................................................................................................................................................................................24115.00150000150
..........................................................................................................ATGGCACTGGAAGAATTCACGGT....................................................................................................................................................................................23115.00150130110
..........................................................................................................ATGGCACTGGAAGAATTCACGGGA...................................................................................................................................................................................24115.00150100023
....................................................................................................................................................CGTGATCTCTTAGTGGCATC.............................................................................................................................................20115.00151210110
.........................................................................................................AATGGCACTGGAAGAATTCACGGCT...................................................................................................................................................................................25114.00141000112
dp5
AAC----TAGTCACA-------------------------------AAAGTGAAATAAGAAGTGAAAAA----CTC-ATAAGTGTATCCACATCCCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTT-TTTCAA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGACT----CA-------------------TC----------------TCAA---TCAATCTCAATC-----GCAACCA-A-CGTTGA---TAATTGTGTTAA----------T------G---------TGSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.........................................................................................................AATGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................2412199034.00219903429838590275028271014926324831805322556833128826748
.........................................................................................................AATGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................231647694.00647694124646411166721780157814231554179384327766155893
.........................................................................................................AATGGCACTGGAAGAATTCACG......................................................................................................................................................................................221221248.002212481963532220496941322382412772490298177334267
.........................................................................................................AATGGCACTGGAAGAATTCAC.......................................................................................................................................................................................211195255.00195255105264812543164314633596157232248110338517835
.........................................................................................................AATGGCACTGGAAGAATTCACGGGT...................................................................................................................................................................................25152873.0052873654431189625638024959325932272556477
.........................................................................................................AATGGCACTGGAAGAATTCA........................................................................................................................................................................................20141774.0041774201791049832182480725187511978910
..........................................................................................................ATGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................23115063.001506314868211017221283114523762602
.........................................................................................................AATGGCACTGGAAGAATTCACGGT....................................................................................................................................................................................24113679.00136791861238613975814165579871948
.........................................................................................................AATGGCACTGGAAGAATTCACGGGA...................................................................................................................................................................................2518465.008465128124058686725552155827802439
.........................................................................................................AATGGCACTGGAAGAATTC.........................................................................................................................................................................................1917576.00757611522932531345212022062886354
..........................................................................................................ATGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................2216420.006420747072571447216903503
..........................................................................................................ATGGCACTGGAAGAATTCACG......................................................................................................................................................................................2114216.00421603725120103012822199
..........................................................................................................ATGGCACTGGAAGAATTCAC.......................................................................................................................................................................................2013203.003203028604514214122047
.........................................................................................................AATGGCACTGGAAGAATTCACGT.....................................................................................................................................................................................2312324.00232445747064983541330544105
..........................................................................................................ATGGCACTGGAAGAATTCA........................................................................................................................................................................................1911832.00183201787100561311
.........................................................................................................AATGGCACTGGAAGAATTCACGGC....................................................................................................................................................................................2411741.0017412378975421123173279335
.........................................................................................................AATGGCACTGGAAGAATTCACGGA....................................................................................................................................................................................2411278.001278276130124651161542294
.........................................................................................................AATGGCACTGGAAGAATTCACT......................................................................................................................................................................................2211178.00117811098164191223684122
.........................................................................................................AATGGCACTGGAAGAATTCACGGTT...................................................................................................................................................................................2511116.00111607646082465165372
.........................................................................................................AATGGCACTGGAAGAATTCACGGGC...................................................................................................................................................................................251950.00950559479831453010513139
....................................................................................................................................................CGTGATCTCTTAGTGGCATCTA...........................................................................................................................................221890.00890614539216266142010912
.........................................................................................................AATGGCACTGGAAGAATTCACA......................................................................................................................................................................................221812.00812025214284731593421236
..........................................................................................................ATGGCACTGGAAGAATTCACGGGT...................................................................................................................................................................................241650.006501465500221349428
...........................................................................................................TGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................221635.0063505507010982238
.........................................................................................................AATGGCACTGGAAGAATTCACGGGTAA-................................................................................................................................................................................271534.005340100001125182
.........................................................................................................AATGGCACTGGAAGAATTCACGA.....................................................................................................................................................................................231403.00403012316627215411856
.........................................................................................................AATGGCACTGGAAGAATTCAA.......................................................................................................................................................................................211385.003850123111129421414519
.........................................................................................................AATGGCACTGGAAGAATTCACGGGG...................................................................................................................................................................................251384.0038433541782125417745
...........................................................................................................TGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................211313.00313029032000585
.........................................................................................................AATGGCACTGGAAGAATT..........................................................................................................................................................................................181293.0029321165021923248517
...........................................................................................................TGGCACTGGAAGAATTCACG......................................................................................................................................................................................201257.00257024500003261
..........................................................................................................ATGGCACTGGAAGAATTC.........................................................................................................................................................................................181230.00230021900004142
.........................................................................................................AATGGCACTGGAAGAATTT.........................................................................................................................................................................................191210.002101128000967032
...........................................................................................................TGGCACTGGAAGAATTCAC.......................................................................................................................................................................................191190.00190018800001010
.............................................................................................................GCACTGGAAGAATTCACGGG....................................................................................................................................................................................201176.0017644910003254252
.........................................................................................................AATGGCACTGGAAGAATTCACGC.....................................................................................................................................................................................231168.00168128721152041512
....................................................................................................................................................CGTGATCTCTTAGTGGCATCT............................................................................................................................................211168.0016836135046513401
.........................................................................................................AATGGCACTGGAAGAATTCACGGGTA..................................................................................................................................................................................261168.0016801214009338326
..........................................................................................................ATGGCACTGGAAGAATTCACGGGA...................................................................................................................................................................................241150.00150213110001456
...........................................................................................................TGGCACTGGAAGAATTCA........................................................................................................................................................................................181138.00138013700000010
..........................................................................................................ATGGCACTGGAAGAATTCACGGT....................................................................................................................................................................................231133.00133095000058196
............................................................................................................GGCACTGGAAGAATTCACGGG....................................................................................................................................................................................211107.0010709020505041
.........................................................................................................AATGGCACTGGAAGAATTCACGTT....................................................................................................................................................................................241107.0010701922055211133
.........................................................................................................AATGGCACTGGAAGAATTCAT.......................................................................................................................................................................................211106.001060129354156457
.........................................................................................................AATGGCACTGGAAGAATTCACC......................................................................................................................................................................................221105.0010501925737194174
........................................................................................................TAATGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................25198.009807350100397
.........................................................................................................AATGGCACTGGAAGAATTCACGGGAA..................................................................................................................................................................................26189.00897381401039116
.........................................................................................................AATGGCACTGGAAGAATTCACGAC....................................................................................................................................................................................24186.008600793000400
............................................................................................................GGCACTGGAAGAATTCACGG.....................................................................................................................................................................................20178.007817500002000
.........................................................................................................AATGGCACTGGAAGAATTCT........................................................................................................................................................................................20173.0073038000919070
.........................................................................................................AATGGCACTGGAAGAATTCACGGGGT..................................................................................................................................................................................26167.0067071001737410
..........................................................................................................ATGGCACTGGAAGAATTCACGT.....................................................................................................................................................................................22165.006505901012020
.........................................................................................................AATGGCACTGGAAGAATTCACGGTA...................................................................................................................................................................................25164.0064051100911334
.............................................................................................................GCACTGGAAGAATTCACGG.....................................................................................................................................................................................19162.00621270000032011
.........................................................................................................AATGGCACTGGAAGAATTCACGGGTC..................................................................................................................................................................................26160.0060025210228200
............................................................................................................GGCACTGGAAGAATTCACG......................................................................................................................................................................................19150.005004400114000
........................................................................................................TAATGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................24143.004303101000560
.........................................................................................................AATGGCACTGGAAGAATTCACGGAT...................................................................................................................................................................................25143.004300000044296
.........................................................................................................AATGGCACTGGAAGAATTCACGGGCC..................................................................................................................................................................................26139.0039000000024150
.........................................................................................................AATGGCACTGGAAGAATTCACGGTAA..................................................................................................................................................................................26139.003900100010370
.........................................................................................................AATGGCACTGGAAGAAT...........................................................................................................................................................................................17137.003700000008218
.........................................................................................................AATGGCACTGGAAGAATTCACGGGTG..................................................................................................................................................................................26137.003700100003060
...........................................................................................................TGGCACTGGAAGAATTCACGGGT...................................................................................................................................................................................23137.003703010002040
............................................................................................................GGCACTGGAAGAATTCAC.......................................................................................................................................................................................18135.003503101102000
.........................................................................................................AATGGCACTGGAAGAATTCACGGAA...................................................................................................................................................................................25133.003325210118103
droWil2
T--------------------------------------------------------------------------------------CTGCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTTTTATTTAACAC-ACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGATTTAAGCA-------------------TACAGAACATCCGACATCA-----------------------------A-G-TGTT-A-----ATTGTATATA----------T------A---------TASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.........................................................................................................AATGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................241397204.0039720472410211263286921780052999
.........................................................................................................AATGGCACTGGAAGAATTCAC.......................................................................................................................................................................................211154925.00154925539546071543313244116246
.........................................................................................................AATGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................231113580.001135802690111187245271776833197
.........................................................................................................AATGGCACTGGAAGAATTCACG......................................................................................................................................................................................22168554.00685545333604320012665130515
.........................................................................................................AATGGCACTGGAAGAATTCA........................................................................................................................................................................................20140095.004009562323706635127029197
.........................................................................................................AATGGCACTGGAAGAATTC.........................................................................................................................................................................................19123596.0023596332323814569518484
.........................................................................................................AATGGCACTGGAAGAATTCACGGGT...................................................................................................................................................................................25115066.0015066621887563624955427
.........................................................................................................AATGGCACTGGAAGAATTCACGGGA...................................................................................................................................................................................2518509.008509436236293618311018
..........................................................................................................ATGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................2312440.0024406520553322067
.........................................................................................................AATGGCACTGGAAGAATTCACGGT....................................................................................................................................................................................2411826.00182647134574479592
.........................................................................................................AATGGCACTGGAAGAATTCACT......................................................................................................................................................................................2211752.0017524432269291378
....................................................................................................................................................CGTGATCTCTTAGTGGCATCTA...........................................................................................................................................2211667.0016674264033109969
.........................................................................................................AATGGCACTGGAAGAATTCACA......................................................................................................................................................................................2211476.0014765958236911032
..........................................................................................................ATGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................2211270.001270281155251349
.........................................................................................................AATGGCACTGGAAGAATTCACGT.....................................................................................................................................................................................2311170.001170427733553663
..........................................................................................................ATGGCACTGGAAGAATTCACG......................................................................................................................................................................................211667.00667459922834
..........................................................................................................ATGGCACTGGAAGAATTCAC.......................................................................................................................................................................................201637.0063734661617135
.........................................................................................................AATGGCACTGGAAGAATTCACGGC....................................................................................................................................................................................241618.0061810814104282110
.........................................................................................................AATGGCACTGGAAGAATTCAA.......................................................................................................................................................................................211591.005911871912535
.........................................................................................................AATGGCACTGGAAGAATTCACGGGG...................................................................................................................................................................................251583.0058349210242235
.........................................................................................................AATGGCACTGGAAGAATTCACGGA....................................................................................................................................................................................241500.00500662175151187
.........................................................................................................AATGGCACTGGAAGAATTCACGGGAA..................................................................................................................................................................................261486.004864351012209
.........................................................................................................AATGGCACTGGAAGAATTCACC......................................................................................................................................................................................221474.0047414124811389
.........................................................................................................AATGGCACTGGAAGAATT..........................................................................................................................................................................................181420.0042021322811328
.........................................................................................................AATGGCACTGGAAGAATTCACGGGC...................................................................................................................................................................................251317.0031763174410093
..........................................................................................................ATGGCACTGGAAGAATTCA........................................................................................................................................................................................191306.0030602576241
.........................................................................................................AATGGCACTGGAAGAATTT.........................................................................................................................................................................................191300.0030055241265
....................................................................................................................................................CGTGATCTCTTAGTGGCATCT............................................................................................................................................211238.00238529715317
.........................................................................................................AATGGCACTGGAAGAATTCACGGTT...................................................................................................................................................................................251237.00237814154754
.........................................................................................................AATGGCACTGGAAGAATTCACGA.....................................................................................................................................................................................231196.001961817469106
...........................................................................................................TGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................221183.00183913914912
.........................................................................................................AATGGCACTGGAAGAATTCC........................................................................................................................................................................................201180.001802063169
.........................................................................................................AATGGCACTGGAAGAATTCAT.......................................................................................................................................................................................211156.0015635146128
.............................................................................................................GCACTGGAAGAATTCACGGG....................................................................................................................................................................................201135.001359424674
.........................................................................................................AATGGCACTGGAAGAATTCACGC.....................................................................................................................................................................................231132.00132291471738
.........................................................................................................AATGGCACTGGAAGAATTCACGTT....................................................................................................................................................................................241117.001171749159
.........................................................................................................AATGGCACTGGAAGAATTCT........................................................................................................................................................................................201116.001160417095
..........................................................................................................ATGGCACTGGAAGAATTCACGGGT...................................................................................................................................................................................241103.00103093325
...........................................................................................................TGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................21176.00761631002
.........................................................................................................AATGGCACTGGAAGAATTA.........................................................................................................................................................................................19174.0074012071
.........................................................................................................AATGGCACTGGAAGAATTCACGGGTA..................................................................................................................................................................................26167.00672172469
...........................................................................................................TGGCACTGGAAGAATTCAC.......................................................................................................................................................................................19158.0058043519
............................................................................................................GGCACTGGAAGAATTCACGGG....................................................................................................................................................................................21156.00563331055
...........................................................................................................TGGCACTGGAAGAATTCACG......................................................................................................................................................................................20152.0052044305
.........................................................................................................AATGGCACTGGAAGAATTCG........................................................................................................................................................................................20147.0047426134
.........................................................................................................AATGGCACTGGAAGAATTCACTT.....................................................................................................................................................................................23142.0042113037
..........................................................................................................ATGGCACTGGAAGAATTC.........................................................................................................................................................................................18139.00391190019
............................................................................................................GGCACTGGAAGAATTCACG......................................................................................................................................................................................19138.0038120917
..........................................................................................................ATGGCACTGGAAGAATTCACGGGA...................................................................................................................................................................................24138.0038132113
.............................................................................................................GCACTGGAAGAATTCACGG.....................................................................................................................................................................................19136.0036175905
droVir3
T--------------------------------------------------------------------------------------CTGCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTTTTATAA--CAC-GCCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAT-ATTACGTACAACAAATGAAAGCTTCTC----------------T----------TCGT-ATT-----CTAGACA-T-GCTTCT---TAATTGTGTTAA----------TTGAGCCGTAAAAAACTTGSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.........................................................................................................AATGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................2412122360.00212236013507853673524133831548195884543774859116916035771451266368417415694939234639858996261582765856758981202240216627142002183890162718624114253120595555365560206446496746199174613242533373166948242534983216447516040321127541629566481378014236366856944310531506187326970223951917903516100224755621841865317973126021147914494
.........................................................................................................AATGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................231641016.0064101649102210772916485812027384020334743533978073516659936120453319185252457926272272930301837606897432463451482043041260722817914293739256535071373184169969499919447282215149421644126067485076202891140357642314202026324482600110913014245792847372441963029356984494811856439494158726741
.........................................................................................................AATGGCACTGGAAGAATTCACG......................................................................................................................................................................................221223175.0022317547022399175376582135370523251332158229097411332543262508155041943002205821803065543929602231209644832930428788742744747713691516193030221236651628251244919203266506846421330194638224368444394348316482039364469294761665596323433592327305137509426715843
.........................................................................................................AATGGCACTGGAAGAATTCAC.......................................................................................................................................................................................21171545.007154511307946503272429103710006709861498479851322541215796171213846578341441160784576161816761027100819905761926717693312974710590960021646152013201447554291151383078157536229969682113721627148711998992068154838197178222267
.........................................................................................................AATGGCACTGGAAGAATTCACGGGA...................................................................................................................................................................................25168839.0068839686545721092859411154280109109260914092266921218323610213442877118199426238253646222574224503747299277290111513174010617426516225622245135523762812703752794521591561752194667166118488938807166642716922706656738
.........................................................................................................AATGGCACTGGAAGAATTCACGGGT...................................................................................................................................................................................25146371.004637112494251627771534061017313051046162211356833211741725641648430787272170266669347902175562217520825020311827682420205121317224387658163251188117953910861976531122262155251282673237020271429325524057611438463570
.........................................................................................................AATGGCACTGGAAGAATTCA........................................................................................................................................................................................20130153.0030153209169379719102395224547208457105040100457730871580036921772482623718815734916029473922854515731141161351110000021191028413127742302528951536562013104073512222493282341139119
....................................................................................................................................................CGTGATCTCTTAGTGGCATCTA...........................................................................................................................................22112501.00125015747136100430218107501410200039281828256231133215659608275653533391411210369104000101048181023371829205536934215403976000162119399419351733121311001
.........................................................................................................AATGGCACTGGAAGAATTC.........................................................................................................................................................................................1919346.0093461358128671211320762297114313943611128934380136587214714346171431828852661011920003973000000000000000322314697251326660101523275372205103
..........................................................................................................ATGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................2316899.0068991516153896711279141160008531038145151261228232229134101600006700000000111121254111461111717641202084718477946121051214
.........................................................................................................AATGGCACTGGAAGAATTCACGGT....................................................................................................................................................................................2415069.0050691035934710812691751311289010109752889478266801552621326134972645320601690000315901210000011402013129117631691253422928245676458409458149575765
.........................................................................................................AATGGCACTGGAAGAATTCACGGGAA..................................................................................................................................................................................2614412.0044126265044425122110000028176713171932251517616551134150000133251001135591510218222021340945491129133922129419610629228512220165150187
..........................................................................................................ATGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................2213333.0033336526288914320479900010001062114543741131201700002400000010000000052810667140200199201921802238
.........................................................................................................AATGGCACTGGAAGAATTCACGT.....................................................................................................................................................................................2312889.00288950412373263110241043703049343172553852441101891226531116256601670000163601000100001211231381461258741141510104582231412246243543
.........................................................................................................AATGGCACTGGAAGAATTCACGGGG...................................................................................................................................................................................2512677.002677111462825280317082000100111208103042325030000022020000003812312120759404681176212010578823910310409374
.............................................................................................................GCACTGGAAGAATTCACGGG....................................................................................................................................................................................2012638.0026382225144121191213113000420322332416526541537025000011100000000010000016602013110414442032025121128451326101225
.........................................................................................................AATGGCACTGGAAGAATTCACC......................................................................................................................................................................................2212477.002477348733102319101080000213592163431020471733037427602070000617601100000000100010242362380014381206113141118913
.........................................................................................................AATGGCACTGGAAGAATTCACGGA....................................................................................................................................................................................2412163.00216325677103411211419719910024181030202621214915136351218501142019110011910100000023215364551783730899710958881785110382034373947
..........................................................................................................ATGGCACTGGAAGAATTCACG......................................................................................................................................................................................2111999.00199951186111333000000100610322120425325040000520000000000000000000055230000001152001100
....................................................................................................................................................CGTGATCTCTTAGTGGCATCT............................................................................................................................................2111688.0016881217356403924000130001245622276829942424142182101710004631000002002452052020599150030001891679310019716100002
.........................................................................................................AATGGCACTGGAAGAATTCACGGC....................................................................................................................................................................................2411366.001366292100172811057981360007741219268201212815129154160280000518000001000023112102721221864383231481512171125248
.........................................................................................................AATGGCACTGGAAGAATT..........................................................................................................................................................................................1811144.00114415912436264091829801138158212317182542231361604297240300000810112000221252084109924615736135857224291011382603169
.........................................................................................................AATGGCACTGGAAGAATTCACT......................................................................................................................................................................................2211049.0010492679212937217101013689151012202231241611470260000450000000000000000191165575040020112115010562
.........................................................................................................AATGGCACTGGAAGAATTCACGGGC...................................................................................................................................................................................2511032.0010321095836191512915321523000121176961331703828111110428070000290010000001110404120656149411213211121251215608622
.........................................................................................................AATGGCACTGGAAGAATTCACA......................................................................................................................................................................................221872.0087268881130403100016187231716216284457461151019000029000000100020020111131673290841820232026621061317
..........................................................................................................ATGGCACTGGAAGAATTCAC.......................................................................................................................................................................................201774.0077400705002000100002102125010011005220100000100000000000000000000014240000001000000000
.........................................................................................................AATGGCACTGGAAGAATTCACGA.....................................................................................................................................................................................231737.0073730265892834471010141021461041229232527181122500115300000100000001130123013104933252861110124156539254134
..............................................................................................................CACTGGAAGAATTCACGGG....................................................................................................................................................................................191731.007313214122142134000021000010001104147210400003201000101361324363112110053101110210858678910500123
.............................................................................................................GCACTGGAAGAATTCACGG.....................................................................................................................................................................................191718.00718841920138661115140000100002404331213331018000051300000000000000054000120042228565473769890331016
.........................................................................................................AATGGCACTGGAAGAATTCACGGTT...................................................................................................................................................................................251583.0058313732502071150000147320598152921140516719020000029000000000010000209002121903720025438101674
...........................................................................................................TGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................221530.0053014330682013310000011000123023235655030000110000000000001001150121762000108146410402411
............................................................................................................GGCACTGGAAGAATTCACGGG....................................................................................................................................................................................211477.004771646631216145510500173223119477621263186120190100812000000000000000000001857331001320614111900301
.........................................................................................................AATGGCACTGGAAGAATTCACGGGAAA.................................................................................................................................................................................271459.00459231613000000000032012200101010151101001000101100000011211111610017000373484107148196434847
...............................................................................................................ACTGGAAGAATTCACGGG....................................................................................................................................................................................181430.00430132733118463300022311019249137525310151000370000000000100010104202206511030572129384910110
..........................................................................................................ATGGCACTGGAAGAATTCA........................................................................................................................................................................................191398.00398003810000000000000010000000000010000000001000000000000000000001830000000002000000
.........................................................................................................AATGGCACTGGAAGAATTCACGC.....................................................................................................................................................................................231368.0036869205352703172000311231811174222120130900006600000001000000001251248201120010102101231
.........................................................................................................AATGGCACTGGAAGAATTCACGGAA...................................................................................................................................................................................251365.0036547464202000100002012151270202114020000010100100000000100030320031201217173211519141222086136
............................................................................................................GGCACTGGAAGAATTCACGG.....................................................................................................................................................................................201336.00336714523361428158000030000270974107321851202600001124000000000000000010000480100024110300002
.........................................................................................................AATGGCACTGGAAGAATTCACGGGTC..................................................................................................................................................................................261333.003331335811730080000000102160101120274225740210000090000000000010000050012871102023002000000
.........................................................................................................AATGGCACTGGAAGAATTCACGGGTA..................................................................................................................................................................................261322.003224275312010100006106132040214129311030000000010000001101315211703270112303316195172003477
....................................................................................................................................................CGTGATCTCTTAGTGGCATC.............................................................................................................................................201284.0028424331311000000010000220020000001001000010010000001146334111710000000037491943392600000
.........................................................................................................AATGGCACTGGAAGAATTCAA.......................................................................................................................................................................................211267.0026716122400413120000107319699821220310101200205100000000010002010020195100033412002422443
..............................................................................................................CACTGGAAGAATTCACGG.....................................................................................................................................................................................181258.002582813300422431000000000110112020150301500007700000000000011184101100000000011261411202001112
...........................................................................................................TGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................211247.0024702176201102210000000000022201043010300000000000000001000012100000240001040010004111
..........................................................................................................ATGGCACTGGAAGAATTCACGGGT...................................................................................................................................................................................241242.002424117620000040000011201010011001112010000010000000000000001120012070010020202001000
................................................................................................................CTGGAAGAATTCACGGG....................................................................................................................................................................................171211.00211000000000000000000000000000000000000000010000001121083117767450203400102000000014132016
............................................................................................................GGCACTGGAAGAATTCACG......................................................................................................................................................................................191188.0018800190101414314200068630111433224113170360000211000000000000000000001310000000000000100
.........................................................................................................AATGGCACTGGAAGAATTT.........................................................................................................................................................................................191180.001805430004032500002201110110000011110100001000000000000000000100228900000000000000000
.........................................................................................................AATGGCACTGGAAGAATTCACGTT....................................................................................................................................................................................241168.00168211000222111000410531524000000511060000110000000000000110020388400011101000020001
..........................................................................................................ATGGCACTGGAAGAATTCACGGGA...................................................................................................................................................................................241163.001631351070000000000000010001100000002201000020000000000000000003002420020013234100001
.........................................................................................................AATGGCACTGGAAGAAT...........................................................................................................................................................................................171162.001620000000000000000000000000000000000000000010000111114276984818040972101100000001316
.............................................................................................................GCACTGGAAGAATTCACG......................................................................................................................................................................................181146.0014670131313130100001010214039001003010700002400000000000000020000010021021581048810012
.........................................................................................................AATGGCACTGGAAGAATTCACGGTC...................................................................................................................................................................................251144.001441121060008000020100013020000091310260120000040000000000000000010212206000000000000100
...........................................................................................................TGGCACTGGAAGAATTCACG......................................................................................................................................................................................201142.00142001150002010000001000000010011262003000000000000000000000000000210000000013000000
........................................................................................................TAATGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................251121.0012130611000101000000010000000000000000000001000000010143022010410210000045425601201
.........................................................................................................AATGGCACTGGAAGAATTCACGGGTCG.................................................................................................................................................................................271120.00120100000000000000000000000000000000000000000000000000000000000000000001324198243100000
.........................................................................................................AATGGCACTGGAAGAATTCACGGGTAA.................................................................................................................................................................................271119.0011971320000000000011001001200000014200000000000000000001000208102300012180042010077106
.........................................................................................................AATGGCACTGGAAGAATTCAT.......................................................................................................................................................................................211114.001141113410011400001714118211000101210100001400000000000100000010122900100011201000001
........................................................................................................TAATGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................241114.00114213620001000000000000001000010122000000100200000000020002110034000000885514701010
....................................................................................................................................................CGTGATCTCTTAGTGGCATCTAA..........................................................................................................................................231109.0010900105070000000000100100010200000000000410000000000100000000000000000181985152000000
.........................................................................................................AATGGCACTGGAAGAATTCT........................................................................................................................................................................................20188.00880013000020100000011200010001001000100000000000000000000000100135000000000000000000
.........................................................................................................AATGGCACTGGAAGAATTCACAA.....................................................................................................................................................................................23188.008801300000000000012101011000001100000000000000000000000000010001300079200000016101214
.........................................................................................................AATGGCACTGGAAGAATTCACGGAAA..................................................................................................................................................................................26187.008710110000010000000100101000101000000010000000000000000000060001000143100102012071011
................................................................................................................CTGGAAGAATTCACGG.....................................................................................................................................................................................16187.00870000000000000000000000000000000000000000000000000012110962726000140000000000000000
....................................................................................................................................................CGTGATCTCTTAGTGGCATCTC...........................................................................................................................................22180.00800002912190000000010200702600000000010000106000000000000000000020000000010000000000
..........................................................................................................ATGGCACTGGAAGAATTC.........................................................................................................................................................................................18179.007903700000001000000000100000000000000000000000000000000000000001300000000000000000
.........................................................................................................AATGGCACTGGAAGAATTCACGGTA...................................................................................................................................................................................25176.007631411100020000202224001000100421030000100000000000000000021061800104000000001212
.........................................................................................................AATGGCACTGGAAGAATTCACGGTAA..................................................................................................................................................................................26168.0068101000000000000100010030101000010001000001000000000000000100040005102020001141817
droMoj3
T--------------------------------------------------------------------------------------TCGCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTTTTC-TA-ACAC-GCCCGTGATCTCTTAGTGGCATCTATGGTGCGGGA---------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.........................................................................................................AATGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................241530178.0053017842871207333894799937792876753
.........................................................................................................AATGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................23174673.00746731398593186022183404922630
.........................................................................................................AATGGCACTGGAAGAATTCAC.......................................................................................................................................................................................21155655.00556551124777535077838469927589
.........................................................................................................AATGGCACTGGAAGAATTCA........................................................................................................................................................................................20126297.002629754281112522556710812561
.........................................................................................................AATGGCACTGGAAGAATTCACG......................................................................................................................................................................................22121215.0021215497019310912224231810419
.........................................................................................................AATGGCACTGGAAGAATTCACGGGT...................................................................................................................................................................................25111691.001169193623721247433376495
.........................................................................................................AATGGCACTGGAAGAATTC.........................................................................................................................................................................................1916983.0069836728723161373960
.........................................................................................................AATGGCACTGGAAGAATTCACGGGA...................................................................................................................................................................................2516412.00641272810413030326902457
..........................................................................................................ATGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................2315846.00584643851449137460
....................................................................................................................................................CGTGATCTCTTAGTGGCATCTA...........................................................................................................................................2214638.004638992971615412784
.........................................................................................................AATGGCACTGGAAGAATTCACGGC....................................................................................................................................................................................2412368.002368172217332166113
.........................................................................................................AATGGCACTGGAAGAATTCACC......................................................................................................................................................................................2211663.001663180146105111320
..........................................................................................................ATGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................2211543.001543141600310222
.........................................................................................................AATGGCACTGGAAGAATTCACGGT....................................................................................................................................................................................2411467.001467122184576687519
..........................................................................................................ATGGCACTGGAAGAATTCAC.......................................................................................................................................................................................2011283.00128312440241320
.........................................................................................................AATGGCACTGGAAGAATTCACGGGC...................................................................................................................................................................................2511092.001092301861693389
..........................................................................................................ATGGCACTGGAAGAATTCA........................................................................................................................................................................................191583.0058356902408
..........................................................................................................ATGGCACTGGAAGAATTCACG......................................................................................................................................................................................211569.00569550003610
.........................................................................................................AATGGCACTGGAAGAATTCACGGA....................................................................................................................................................................................241480.00480376819266144
....................................................................................................................................................CGTGATCTCTTAGTGGCATCT............................................................................................................................................211434.0043419561733516
...........................................................................................................TGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................221359.003592551018616
.........................................................................................................AATGGCACTGGAAGAATTCACA......................................................................................................................................................................................221355.00355750314811190
.........................................................................................................AATGGCACTGGAAGAATTCACGT.....................................................................................................................................................................................231346.00346340522150135
.........................................................................................................AATGGCACTGGAAGAATTCACT......................................................................................................................................................................................221343.0034333222419236
.........................................................................................................AATGGCACTGGAAGAATT..........................................................................................................................................................................................181317.00317552611432036
.........................................................................................................AATGGCACTGGAAGAATTCACGC.....................................................................................................................................................................................231184.00184513612445
.........................................................................................................AATGGCACTGGAAGAATTCACGGGG...................................................................................................................................................................................251183.001831014513726
.........................................................................................................AATGGCACTGGAAGAATTCACGAC....................................................................................................................................................................................241156.0015600001560
............................................................................................................GGCACTGGAAGAATTCACGGG....................................................................................................................................................................................211139.001396011124520
.........................................................................................................AATGGCACTGGAAGAATTCT........................................................................................................................................................................................201136.001361701833068
.........................................................................................................AATGGCACTGGAAGAATTCACGGGAA..................................................................................................................................................................................261135.00135411264243
.........................................................................................................AATGGCACTGGAAGAATTCAA.......................................................................................................................................................................................211127.001273741642325
.........................................................................................................AATGGCACTGGAAGAATTT.........................................................................................................................................................................................191122.001221301332064
.........................................................................................................AATGGCACTGGAAGAATTCACGGTT...................................................................................................................................................................................251118.0011880672869
..........................................................................................................ATGGCACTGGAAGAATTCACGGGT...................................................................................................................................................................................241116.0011696000812
.........................................................................................................AATGGCACTGGAAGAATTCAT.......................................................................................................................................................................................211109.0010914220401122
.........................................................................................................AATGGCACTGGAAGAATTCACGA.....................................................................................................................................................................................23197.0097320252632
...........................................................................................................TGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................21191.00918100082
...........................................................................................................TGGCACTGGAAGAATTCAC.......................................................................................................................................................................................19178.00787400031
..........................................................................................................ATGGCACTGGAAGAATTC.........................................................................................................................................................................................18176.00767102003
..........................................................................................................ATGGCACTGGAAGAATTCACGGGA...................................................................................................................................................................................24171.00716600122
.............................................................................................................GCACTGGAAGAATTCACGGG....................................................................................................................................................................................20170.0070402111313
....................................................................................................................................................CGTGATCTCTTAGTGGCATC.............................................................................................................................................20169.00690001671
........................................................................................................TAATGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................25168.006838000291
.........................................................................................................AATGGCACTGGAAGAATTCACGGGTA..................................................................................................................................................................................26164.006450212531
....................................................................................................................................................CGTGATCTCTTAGTGGCATCC............................................................................................................................................21154.00540000540
...........................................................................................................TGGCACTGGAAGAATTCA........................................................................................................................................................................................18147.00474500101
...............................................................................................................ACTGGAAGAATTCACGGG....................................................................................................................................................................................18146.004627400105
.........................................................................................................AATGGCACTGGAAGAATTCACGGGTC..................................................................................................................................................................................26143.004300001924
.........................................................................................................AATGGCACTGGAAGAATTCC........................................................................................................................................................................................20137.003700221104
.........................................................................................................AATGGCACTGGAAGAATTCACCC.....................................................................................................................................................................................23137.00377022125
.........................................................................................................AATGGCACTGGAAGAATTCAG.......................................................................................................................................................................................21133.00331023261
.........................................................................................................AATGGCACTGGAAGAATTCACGTT....................................................................................................................................................................................24129.002911121311
.........................................................................................................AATGGCACTGGAAGAATTCACGGTA...................................................................................................................................................................................25128.00282012716
............................................................................................................GGCACTGGAAGAATTCAC.......................................................................................................................................................................................18128.00281811125
...........................................................................................................TGGCACTGGAAGAATTCACG......................................................................................................................................................................................20128.00282500012
........................................................................................................TAATGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................24127.00272200050
droGri2
T--------------------------------------------------------------------------------------CTGCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTATTTTAA--CAC-GCCCGTGATCTCTTAGTGGCATCTATGGTGCGGGA---------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.........................................................................................................AATGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................2417031.00703134693562
.........................................................................................................AATGGCACTGGAAGAATTCACG......................................................................................................................................................................................2216212.00621227153497
.........................................................................................................AATGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................2313970.00397023821588
.........................................................................................................AATGGCACTGGAAGAATTCAC.......................................................................................................................................................................................2113761.00376115042257
.........................................................................................................AATGGCACTGGAAGAATTCA........................................................................................................................................................................................2012478.0024787431735
.........................................................................................................AATGGCACTGGAAGAATTC.........................................................................................................................................................................................191685.00685155530
..........................................................................................................ATGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................231381.003813765
..........................................................................................................ATGGCACTGGAAGAATTCACG......................................................................................................................................................................................211298.002982953
..........................................................................................................ATGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................221248.002482453
.........................................................................................................AATGGCACTGGAAGAATTCACGGGT...................................................................................................................................................................................251199.0019982117
..........................................................................................................ATGGCACTGGAAGAATTCAC.......................................................................................................................................................................................201172.001721693
.........................................................................................................AATGGCACTGGAAGAATTCACGGGA...................................................................................................................................................................................251171.001717794
..........................................................................................................ATGGCACTGGAAGAATTCA........................................................................................................................................................................................19179.0079781
.........................................................................................................AATGGCACTGGAAGAATTCACGGT....................................................................................................................................................................................24172.00722745
....................................................................................................................................................CGTGATCTCTTAGTGGCATCTA...........................................................................................................................................22159.00593524
.........................................................................................................AATGGCACTGGAAGAATT..........................................................................................................................................................................................18157.0057507
.........................................................................................................AATGGCACTGGAAGAATTCACT......................................................................................................................................................................................22140.00401228
.........................................................................................................AATGGCACTGGAAGAATTCACGT.....................................................................................................................................................................................23138.00381523
...........................................................................................................TGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................22133.0033330
.........................................................................................................AATGGCACTGGAAGAATTCACA......................................................................................................................................................................................22124.0024915
.........................................................................................................AATGGCACTGGAAGAATTCACGA.....................................................................................................................................................................................23118.0018711
...........................................................................................................TGGCACTGGAAGAATTCACG......................................................................................................................................................................................20117.0017170
...........................................................................................................TGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................21115.0015150
..........................................................................................................ATGGCACTGGAAGAATTCACGGGA...................................................................................................................................................................................24114.0014140
.........................................................................................................AATGGCACTGGAAGAATTCACGC.....................................................................................................................................................................................23114.0014212
..........................................................................................................ATGGCACTGGAAGAATTC.........................................................................................................................................................................................18113.0013130
...........................................................................................................TGGCACTGGAAGAATTCAC.......................................................................................................................................................................................19113.0013130
..........................................................................................................ATGGCACTGGAAGAATTCACGGGT...................................................................................................................................................................................24112.0012111
....................................................................................................................................................CGTGATCTCTTAGTGGCATCT............................................................................................................................................21110.001046
.........................................................................................................AATGGCACTGGAAGAATTCAA.......................................................................................................................................................................................2119.00936
.........................................................................................................AATGGCACTGGAAGAATTCACGGC....................................................................................................................................................................................2419.00945
.........................................................................................................AATGGCACTGGAAGAATTCACGGA....................................................................................................................................................................................2418.00835
.........................................................................................................AATGGCACTGGAAGAATTCACC......................................................................................................................................................................................2218.00835
.........................................................................................................AATGGCACTGGAAGAATTCACGGGC...................................................................................................................................................................................2518.00835
.........................................................................................................AATGGCACTGGAAGAATTCACGGTT...................................................................................................................................................................................2518.00817
............................................................................................................GGCACTGGAAGAATTCACGGG....................................................................................................................................................................................2117.00770
........................................................................................................TAATGGCACTGGAAGAATTCACG......................................................................................................................................................................................2316.00660
.........................................................................................................AATGGCACTGGAAGAATTCACGGGAA..................................................................................................................................................................................2615.00550
........................................................................................................TAATGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................2514.00440
..........................................................................................................ATGGCACTGGAAGAATTCACGGT....................................................................................................................................................................................2314.00440
.........................................................................................................AATGGCACTGGAAGAATTT.........................................................................................................................................................................................1914.00413
...........................................................................................................TGGCACTGGAAGAATTCA........................................................................................................................................................................................1814.00440
............................................................................................................GGCACTGGAAGAATTCAC.......................................................................................................................................................................................1813.00321
.............................................................................................................GCACTGGAAGAATTCACG......................................................................................................................................................................................1813.00330
............................................................................................................GGCACTGGAAGAATTCACG......................................................................................................................................................................................1912.00220
.........................................................................................................AATGGCACTGGAAGAATTCT........................................................................................................................................................................................2012.00220
.........................................................................................................AATGGCACTGGAAGAATTCACGATT...................................................................................................................................................................................2512.00220
.............................................................................................................GCACTGGAAGAATTCACGGG....................................................................................................................................................................................2012.00220
.........................................................................................................AATGGCACTGGAAGAATTCACGGGG...................................................................................................................................................................................2512.00220
.....................................................................................................................................................GTGATCTCTTAGTGGCATCTA...........................................................................................................................................2112.00220
.....................................................................................................................................................GTGATCTCTTAGTGGCATCT............................................................................................................................................2012.00220
.........................................................................................................AATGGCACTGGAAGAATTCAT.......................................................................................................................................................................................2112.00211
............................................................................................................GGCACTGGAAGAATTCACGG.....................................................................................................................................................................................2012.00220
.........................................................................................................AATGGCACTGGAAGAATTCACGGCA...................................................................................................................................................................................2511.00110
........................................................................................................TAATGGCACTGGAAGAATT..........................................................................................................................................................................................1911.00110
............................................................................................................GGCACTGGAAGAATTCACGGGT...................................................................................................................................................................................2211.00110
........................................................................................................TAATGGCACTGGAAGAATTCACGGGT...................................................................................................................................................................................2611.00110
.........................................................................................................AATGGCACTGGAAGAATTCG........................................................................................................................................................................................2011.00110
.........................................................................................................AATGGCACTGGAAGAATTCACGGAA...................................................................................................................................................................................2511.00110
droAna3
AATA----------------------------ATAGGG--------TAAGTGGAAAA-AAAGTGAAA-----------CAA--GTTTCTCCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGATTAAAACA-------------------TC----------------AAAAAAGTGAACAAAA--------------A-A-CTCTGA---AAAGTGTGAAACTCTGAATATT-TCTACCG-----------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.........................................................................................................AATGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................241128258.001282584904114611162051691533342484
.........................................................................................................AATGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................23180543.00805432893477024103031853431932
.........................................................................................................AATGGCACTGGAAGAATTCACG......................................................................................................................................................................................22179574.00795742124290322483491815430702
.........................................................................................................AATGGCACTGGAAGAATTCAC.......................................................................................................................................................................................21166838.0066838115588872124812889140478
.........................................................................................................AATGGCACTGGAAGAATTCA........................................................................................................................................................................................20132703.0032703690229623243735715110
.........................................................................................................AATGGCACTGGAAGAATTCACGGGT...................................................................................................................................................................................2519851.00985119673745340318485206
.........................................................................................................AATGGCACTGGAAGAATTC.........................................................................................................................................................................................1918357.00835779292064223714523
..........................................................................................................ATGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................2315198.0051985048563102457
.........................................................................................................AATGGCACTGGAAGAATTCACGGGA...................................................................................................................................................................................2513326.0033267251272106140332751
..........................................................................................................ATGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................2212959.002959287925021340
..........................................................................................................ATGGCACTGGAAGAATTCACG......................................................................................................................................................................................2112432.002432236922102029
.........................................................................................................AATGGCACTGGAAGAATTCACGT.....................................................................................................................................................................................2312295.0022952423751153221574
.........................................................................................................AATGGCACTGGAAGAATTCACGGT....................................................................................................................................................................................2412278.00227836175151325071188
.........................................................................................................AATGGCACTGGAAGAATTCACT......................................................................................................................................................................................2211349.00134915234124333733
..........................................................................................................ATGGCACTGGAAGAATTCAC.......................................................................................................................................................................................2011308.0013081265105631
.........................................................................................................AATGGCACTGGAAGAATTCACA......................................................................................................................................................................................221816.0081614726969171394
..........................................................................................................ATGGCACTGGAAGAATTCA........................................................................................................................................................................................191720.0072070200198
.........................................................................................................AATGGCACTGGAAGAATTCACGGC....................................................................................................................................................................................241473.0047367145104761143
.........................................................................................................AATGGCACTGGAAGAATTCACGGA....................................................................................................................................................................................241467.004671966361971112
.........................................................................................................AATGGCACTGGAAGAATT..........................................................................................................................................................................................181432.004321021626921222
.........................................................................................................AATGGCACTGGAAGAATTCAA.......................................................................................................................................................................................211380.00380331752265238
.........................................................................................................AATGGCACTGGAAGAATTCACGGGAA..................................................................................................................................................................................261373.0037331311122710
.........................................................................................................AATGGCACTGGAAGAATTCACGGGC...................................................................................................................................................................................251366.003667511732427120
....................................................................................................................................................CGTGATCTCTTAGTGGCATCTA...........................................................................................................................................221332.003321121232062546
.........................................................................................................AATGGCACTGGAAGAATTCAT.......................................................................................................................................................................................211328.00328212028107170
.........................................................................................................AATGGCACTGGAAGAATTT.........................................................................................................................................................................................191320.0032052001898152
...........................................................................................................TGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................221307.0030729631142
.........................................................................................................AATGGCACTGGAAGAATTCACGC.....................................................................................................................................................................................231287.00287284604227144
.........................................................................................................AATGGCACTGGAAGAATTCACGGTT...................................................................................................................................................................................251270.0027032301284139
.........................................................................................................AATGGCACTGGAAGAATTCACGA.....................................................................................................................................................................................231256.0025673522162390
..........................................................................................................ATGGCACTGGAAGAATTCACGGGT...................................................................................................................................................................................241237.00237219012312
.........................................................................................................AATGGCACTGGAAGAATTCAG.......................................................................................................................................................................................211232.00232150592129
...........................................................................................................TGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................211232.0023222630021
.........................................................................................................AATGGCACTGGAAGAATTCT........................................................................................................................................................................................201185.001853500205080
...........................................................................................................TGGCACTGGAAGAATTCACG......................................................................................................................................................................................201175.0017517301010
.........................................................................................................AATGGCACTGGAAGAATTCACGTT....................................................................................................................................................................................241140.0014080184578
.........................................................................................................AATGGCACTGGAAGAATTCACC......................................................................................................................................................................................221121.001212454491623
...........................................................................................................TGGCACTGGAAGAATTCAC.......................................................................................................................................................................................191115.0011510900024
............................................................................................................GGCACTGGAAGAATTCACGGG....................................................................................................................................................................................21192.009265600138
..........................................................................................................ATGGCACTGGAAGAATTC.........................................................................................................................................................................................18187.00877900125
..........................................................................................................ATGGCACTGGAAGAATTCACGGGA...................................................................................................................................................................................24185.00857480003
.........................................................................................................AATGGCACTGGAAGAATTCACGGGG...................................................................................................................................................................................25170.0070202821055
.........................................................................................................AATGGCACTGGAAGAATTCACTT.....................................................................................................................................................................................23154.005410005930
............................................................................................................GGCACTGGAAGAATTCACGG.....................................................................................................................................................................................20148.00483720027
...........................................................................................................TGGCACTGGAAGAATTCA........................................................................................................................................................................................18148.00484700001
.........................................................................................................AATGGCACTGGAAGAATTCACGGAA...................................................................................................................................................................................25147.00473311048
.............................................................................................................GCACTGGAAGAATTCACGGG....................................................................................................................................................................................20146.00463720052
....................................................................................................................................................CGTGATCTCTTAGTGGCATCT............................................................................................................................................21146.004621101374
............................................................................................................GGCACTGGAAGAATTCACG......................................................................................................................................................................................19141.004124002312
..........................................................................................................ATGGCACTGGAAGAATTCACGGT....................................................................................................................................................................................23137.00373601000
.........................................................................................................AATGGCACTGGAAGAATTCG........................................................................................................................................................................................20137.00371006723
.............................................................................................................GCACTGGAAGAATTCACGG.....................................................................................................................................................................................19136.00362730033
droBip1
GAA----TGTATACA-------------------------------AAAATGAA----AAAGTGAAA-----------AAAATGTTTCTCCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGATTAAAACA-------------------TC----------------AAAAGAGTGAA------TACAAAAAAAACCA-A-TG--------AAAAGTGTTAA------TATT-TCTACCG-----------SizeHit CountTotal NormTotal
No Reads
droKik1
TGA-----------------A--------ATTGTAAGACAAGATCT----------------------AAGATCTTGCAGAGTGTTAAACCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTATTTCTA--AACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAATTGAACA-------------------TC----------------CAATC--AGAATCAAAATCAA-AATCA---A-A-AGTT-A---TAAATGTGTTAA----------T------G---------TGSizeHit CountTotal NormTotal
No Reads
droFic1
AAC----------------------------CAAAGAGCAAGATAT----------------------ATAATCTTGACAA--GTCACTCCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAATAAGACA-------------------TC----------------AAAT----CA----------------AATCAAA-AGCT-A---AGAATGTGATAA----------T------G-----------SizeHit CountTotal NormTotal
No Reads
droEle1
AATA----------------------------------TAAAATAC----------------------TAGTTCTTG-AAAGTGTAACTCCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTCA--TACCACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAATAAAACA-------------------TC----------------AAAA---T-----------------CAATCA-ATGGTT-A---TAAATGTGTTAA----------T------G-----------SizeHit CountTotal NormTotal
No Reads
droRho1
A---------------GTGAA--------TCCAAAGAATGAGATGC----------------------TCAATCTT-TAAAGTGTTACTACATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCTA--TACCACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAATAAAACA-------------------TC----------------CAAA---TGAACAAAGATTCA-AGTCAATCAAA-AGTT-----AAAACGTGTTAA----------T------A-----------SizeHit CountTotal NormTotal
No Reads
droBia1
TACA--A--------AGT----------------------------AAAGTGAAAAATAAAGTGATATGC-----GATGAAG--T-----AATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTGATTT-TA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAACAAAACA-------------------AC----------------CACA---TGAAGCAAAATTCA-AATCAACCT-ATGGGT-A---AAAATGTGTTAA----------T------G-----------SizeHit CountTotal NormTotal
No Reads
droTak1
TCA-TAA--------AGTGAA--------AACAAAGAACAAGATTT----------------------TC-----AATC--GTGT-----AATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTTA--TACAACCCGTGATCTCTTAGTGGCATTTATGGTGCGGGAATAAAACA-------------------TC----------------AAA-----------------------------A-AGTT-ACAAAAAATGTGTTAA----------T------G-----------SizeHit CountTotal NormTotal
No Reads
droEug1
AATCTAA--------AGTGAA--------ATCAAAGAAGAAGTTGC----------------------AGAATCTTGTGAAGTGTTCAATCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGATTAAAACA-------------------TC----------------CAA-----------------------------A-AGTT-G---AAAAAGTATTAA----------T------A-----------SizeHit CountTotal NormTotal
No Reads
dm3
AAC-----------------------AAG-----AAAAGTAAATAT----------------------ACCATCTAATG----GTATATAGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAAACA-------------------TC----------------CAAAA--TGAAACGAAATCCG-AAACTTTCA-A-AGTT-A---AAAATGTGCTAA----------T------G---------TASizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.........................................................................................................AATGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................2413967193.0039671937110798521716422786531354445644107019071369116100522312975222180196718261041224444968043544343443641241310271355778102973971132241765111469699178523137120101357658116000000000000000002417112240206702382261213271374448170511347147460311091709133352175312914438141549910368421120147033183501122097127223370360954025444114617124162367358340390997609523655809787115394132520692657968226651476921589108984514176121571715261751620987512393255360204463176210681948240487729981499153023292603226564085512083348343865392278101137718331116211259626174707547203473476452537604399811045963148895948748876512321159318614210211641118504623422001114941221471002603554569574764648445110337877830306043139148816501843194000138498504135905419345851226689667681167304033743148072650821421714841913813824971170126225651363053518325687014150950073872566826932471226791932424416358256423518031775919372109543352903378912946738433445201042444841404786841144185223974270652186418282167228916737143021283243120721492327332313055797628314145454791141257
.........................................................................................................AATGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................2311719414.001719414100056510316535132581161950207054063341023107115000002890945940675910200611747132826222261554101394392616362119244058085069710300000000000000000112714233565529016971822601821161821042073563208772113433766148431345782763174224294232388444152027171771848191554550637212171105346255172196467134331201751831483174553148225214324313545250379337472428357942258219168394616128826643734017811182259999775529971243835414735688849637104603125821326615391565431783699493743334290634388521402139462324310846942941239601814342308155192804939899511079449151389925340262503826236203286101323213279326499117945001528115642439598613822502195222194003121138018021530106114262921649151383175901080782384518203171454968812896260341450010255774698563329893579303625633472950955047014514569715100598421101166331513502776625715432560114437209931421750291127317540771651027507621013409711152533182983234
.........................................................................................................AATGGCACTGGAAGAATTCACG......................................................................................................................................................................................2211524050.001524050000013258017555920781150664150616381523151044150845020919601717151726481036791603798256206529028793141309175368418592586592814012840130649803132000000000000000002432113010158015714576057718714683091281255694711359231112392342324814920215002893957547965376491146771152893520429181833224716524371174892241181068223021681611841329737665243637855265050333431662422339117171672449791497425612240585054539704291201961633207523821626351061132894826362131534816456159981705163002962106176585316027062610989353263381538375032171614211461372078410146573812637803019905972611011137401754221507128437868320596138045170021611386225992846227021535113852193304011021025460604070262211453030175961238151755410657921188159191517535747747221216921994227821521918243219110699148707579766259395813920844530408236702326931294709619216003416848369522721237251856836741627869914506019063267933693529120286862172020121
.........................................................................................................AATGGCACTGGAAGAATTCAC.......................................................................................................................................................................................2111151484.00115148400008815002201761901110318021728122746052104164847131613191470271279350316237140590309586212543434447596768859801154322204725567100000000000000000172116148615025482801777833021960501152282650241135394716338239262215197031203211642383625513108122618066516241141022411350495626352497562777210136103426012139220212492244270618011689104712334268111411118465565354046487403033331699515165714415142551327644119102319296829773035993772711953401342456927282536671648285881268154146296169261692826203581076273837154584099706496719514525937455342230107600126811732185948772082110270327641025780023457890401060015147422261020771814124057900914567111009333323574335539073268882477817033206751507124051242363404958951655593981412890623284152349121133164681899619766291904365230333127241161244898117120527771242018851386922788860765163128313
.........................................................................................................AATGGCACTGGAAGAATTCA........................................................................................................................................................................................201387820.00387820000044140011402021073042611041902086202343716665510194468272545629173246538779140531531803588241200027227838000000000000000006566459041612076241519224740911323533130205866389516391820462073164022292990242952164143278134375875506152081019141474383857182934939622382272351141601022453611241810131859298901226442653879353810281995212372879342356551690763247191332811008491184623025331591841618711014168304518722540140465570438370470415693884284749135355001711381959206111410917061996617450125319940300020102141811253617941299818569311824103460323928232104214841134271207214962302159762673555214975591208111743922125257121531192514163318837377573161421002218122417749449301930171649886115951337422278925199
.........................................................................................................AATGGCACTGGAAGAATTCACGGATC..................................................................................................................................................................................261187500.00187500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012035067149000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.........................................................................................................AATGGCACTGGAAGAATTC.........................................................................................................................................................................................191185290.0018529000000000000000200000161134101313161940140132550252214161014493413461017315182312500083791100000000000000000240140000010600101112100049262010000201101593752421214071035215285101001280000114132202104431444173148453817218701310140111414546724780203182090150441572248899801410368320288166702247944001690273782262873229425178900152920241114827805802078010710140153668141825254008150244773474024761333251300401154400001000060003444128774482730470395148381713400633752339332045353083930556182108572011595372898537183856153542362213707720002341451527865279157743582446910665890878430713055
.........................................................................................................AATGGCACTGGAAGAATTCACGGGT...................................................................................................................................................................................251169830.001698300000640103202022000019132200100000000039402427371230406517817944353570931500000000000000000000000001133044000811574410302550211761254721201973301119067017030201003120484202171166833111376146259198238153200200195190812103004091002882130242100507811886158254456495911330222701636415810641412700220121899234554813372724515912810203144208403646928781855125012091252134535431159640237254611555590017292010733336001453441124240040128104000001000004857538415964031727550935024393217120318481109123314171696006402739589122480773275327131358023081715814542093395571611046121542134813120090843360557719668998132722663114
.........................................................................................................AATGGCACTGGAAGAATTCACGGGA...................................................................................................................................................................................25152486.0052486000021000100000001101579000000000000182324131571529231144551516283129800000000000000000000000120041015300017275128139181013361731300014214140312201211373816045001117948110052875631206614183438878843220110100511019218601590148825976195243008810209815812258624005823945745316121258201330013105317166179136990958748948858330479837011811531194895001085006211413000192167412500000930200000000000792682083285166035727261399201475000657501470489165443382158314257187288101372111088803257567107221399010112212433216264151741571856184212000583123216
.........................................................................................................AATGGCACTGGAAGAATTCACGATC...................................................................................................................................................................................25151197.00511970000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000432227975000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................AATGGCACTGGAAGAATTCACGGT....................................................................................................................................................................................24135150.00351500000110100301001000020141200120000000017721426111481273416371551323277618240000000000000000000000000001041500091410411732006119000100101000112421040343807074011044830002548571151211169657140685645410110120157350690454217236264774713575557048178182734122041243360242259710105400625351197461131403281911631942234891378439551853370048270435410000145112180001014500000000000000024721361651337193379188946748002406304254433318368324108514966270278115762401030839814210523824001001211101448444018083565731327754051101033
....................................................................................................................................................CGTGATCTCTTAGTGGCATCTA...........................................................................................................................................22125108.0025108000012041215302060000039427210471311121160203441292236111131464013611127496117214123180002511884700000000000000000000019830293143143032189111991321611266370464015023975757124219406000301518500000010001223100564622732162271332418011322711100000902911004761052326181323384711512508039232429571656150193395140000069103008100888195240144162254437464109521251610001000061452116711001155580350000050100020000141038347151018589634819082241262819001108764367565577734004735887837286627511342801435793757610100000313101245384317256220211790140090
.........................................................................................................AATGGCACTGGAAGAATTCACATC....................................................................................................................................................................................24121481.0021481000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000020897579000000000000000000000000000000000000010000000000001000000000010001000000000000000000000000000000
.........................................................................................................AATGGCACTGGAAGAATTCACGT.....................................................................................................................................................................................23116484.00164840000000001000010010065900010000000011419581837462865914540100000000000000000000000000011101040800132300271000000000000031830100191701200010010000200026333517283921510144603004002044511005021211632705361146100406010351272430022317911300002537000100322393076756269416941161432921451930600630146740002782220000004000000000000000010185411286690106333219130001515279267430371795361891155503432000351284274695167000000022001185334991919223167643301510340
.........................................................................................................AATGGCACTGGAAGAATTCACGGC....................................................................................................................................................................................24112599.00125990000100101100003000060300010000000071537653104117212761432321409800000000000000000000000000004456000203022022000020010000000000241030207010221000001001014513192757234182508777941400000000112926032312100501211243014019265192249002283121000027380000002324118404188335465618278328222451248003421086300020241240000160100000000000001271376726018293228191415000147157118158150349100350599210727551425513121703126918926610000020010281738245681332361441620133
.........................................................................................................AATGGCACTGGAAGAATT..........................................................................................................................................................................................18110945.00109450000000000000001010091100011321623252103111116024142424130004038100000000000000000011110000000010200020600107000000100000115401005308343482243080000016240007292121161702201012000190300483470315319277242367257742000155424121691530038078114830163725590010000421783119719219164137162375401120002503759400041720510010053000000000211010502582718837266179003210056730653169362311074243629125422590361493115332100020000000001941079629126901823151050001
..........................................................................................................ATGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................2319744.00974400002300122030432000335000024729282802021010362118721818471116181000351000000000000000000000070441901091440410692118202049322100005327309018180407523000025364847591121101155832422282720222760000000180684405336291836353487816759140007029352411380085482723112242202020472710234353236312625718428432724189701410008907420001219080000015000000010010020955415634960510372377500046463535244918160112612266308411608105435201387000000501002644401818514822919808001422
.........................................................................................................AATGGCACTGGAAGAATTCACGGA....................................................................................................................................................................................2419014.0090140000480015253960000000221000000000000462010353243813215245964000000000000000000000000000112530001151121160389010100103010031650101038020110010100152000108281238132171297120100103200293002913752017188313546500030293141401910012084923025111800010010247135345814433566212641246225144085300279010800001016029000001100000000000000144401412254432917126131001065953533865472202823321002339801551151512216725000000020203267625308103921601280210214
.........................................................................................................AATGGCACTGGAAGAATTCACA......................................................................................................................................................................................2218880.00888000007000045030000000311000100000000113150166234312929010000000000000000000000000003204000020622001341000283080000011010010014112801071605044000000100001200172920106254642600000000507769046002338022060177002010742355260001316340001051100000000013325954393116422454182200032157004709412000314502600000550000000000000105836052284765261311702000320242223244323313489156202956862640257218024676150000000100003571202455162181251209060080
.........................................................................................................AATGGCACTGGAAGAATTCACT......................................................................................................................................................................................2216668.006668000000000000000000000311011000000004421841041047014173500000000000000000000000000102000000111520000000135000000100000504502002601205700010000000000016213014292010475170001210000282202900850601501620002016938318000405270220042500000030005161895381116310111412360053031221000354002100001270000000000000016340843329343743861100018510593166151011486307910321869129015313703132023000000200003821147463111125230162040060
.........................................................................................................AATGGCACTGGAAGAATTCAA.......................................................................................................................................................................................2116412.00641200004000001000000000466001110000000010001194011033031584510000000000000000000000000000000110001012001607001610000100400000409201104513191571000000000040004951211620180300000000365903800102101501010178400000408315300041126000001700300000012122121071263764100146100650414100011120150000043000000000000000194597175381177785287904003251226210161551224131972314645218602262440182580000000100009336013735434447010030
....................................................................................................................................................CGTGATCTCTTAGTGGCATCT............................................................................................................................................2115993.00599300000000100000000000118420140800000181156141524131861518213520500019154000000000000000000001171224160001391234351041800112000128306012202010003022000050110013943411244404314111619452400000202410011180820333681017283300010095322179200153800000159000000845867528268030463669424568100010001086701743000141616001001000010000060098822921054151116545838621000256211827141198181712297192711663102326091731081100000207000032615856371028040020
.........................................................................................................AATGGCACTGGAAGAATTCACGC.....................................................................................................................................................................................2315034.00503400000000100000000000001000100000000223510843804123468840000000000000000000000000000000100040112020000100100000000000208202002702010000000001000030816141685342011223000000000020170120061010434000010681417000015411200005100000000011441214198131421311312010020500210120000360120000050000000000000008810353242862107218138020007061386275532161279154721462066371115223800000011000671548323266134010030
.........................................................................................................AATGGCACTGGAAGAATTCACGA.....................................................................................................................................................................................2314046.004046000041001425100000002000000000000000205211112121142151100000000000000000000000001000000000207100403007411000000000001263010301001022000000000101000293533202050000000000344103131814212230757100000341823560001105160000068000000100195321022291031165318142013788136004301121000111201200000120000000000000002616711130312084350300010491698612833120172617524607557012833590000000200011634511335346752010064
.........................................................................................................AATGGCACTGGAAGAATTCACGGGC...................................................................................................................................................................................2514040.0040400000000010000000000044200000000000041210411213186191332714281310000000000000000000000000000005100010111121100010000000000010201480301316000000036001410021833169137522291830000000001013100540313449245900000362317700905515325413015000000010136192148322024252976281540001519400211107120000161701500000600010000000000014178129221192768030002714342392076013518456367063431334438210000010100176472116461112121300600240
.........................................................................................................AATGGCACTGGAAGAATTCACGGGG...................................................................................................................................................................................2514028.00402800000000000030000000001000001000000021210115311100124112000099865165000000000000000000000100000000010001000000000000000001010251401460200202002100300000002226551000000000000014140151115511366374150002053012100000101300100100000000011431894218136530111000520470000841500000800000000000000028107125437180114023000744355181121111032452634820139671110132200000030000110217581031114460301240
.........................................................................................................AATGGCACTGGAAGAATTCACC......................................................................................................................................................................................2213716.003716000020000000000003001100000000000001420322016103603845050000000000000000000000000001000000000350001000004000000000000001301010001105700020000000300014214720188269191200000000010322601900050204010001001220457000022420000029000000000437919115714181460000170001201160000117090000010000000000000007046533303575009780700153434262818311502648814756163081760110181700000000000451135919295432000020
..........................................................................................................ATGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................2213454.003454000032000110000000000000010100000002010023021210100200000210000000000000000001000000200033134327314004790000000001005084120139010000123401310100004563332631400011001062937020126107243382630400110201219300060371031070127002000240294261112244716091816333100200001100300002803000003000000000000000594283214836278136910000201322351793070868780118136534670000000000099279100294490770300313
.........................................................................................................AATGGCACTGGAAGAATTT.........................................................................................................................................................................................1913301.00330100000000000000000000000000200000000000100010000110010000000000000000000000000000000000000010000000000000000000000000410102110101200010000000000021100900000000000000043001000404465100000203205000030100000000000000360108512021901000000000004103000536011000001101000000000000061551534802030008223898000101010300253303955102550000000000045812203205936175154040030
.........................................................................................................AATGGCACTGGAAGAATTCACGGTT...................................................................................................................................................................................2512832.0028320000000000000000000000000000000000011000050001100120000000000000000000000000000000000000000000000000000000000000000011010000010000001000000000000241022001000000000005230300100108280000102191101000303300000154000000410531291094453842100163002101610001270140000040000000000000004391305512805001442373231175017142216501077100611241000000000028969026185120286154010072
.........................................................................................................AATGGCACTGGAAGAATTCACGGAT...................................................................................................................................................................................2512806.00280600000000000000000000000000000000000000000000000010200000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000001000000000011021100000225000000000100000020000000100000000000010020110000001653990000001100000101000001000000000000000022312020000002120010020014504500111100000000001439122675000000
.........................................................................................................AATGGCACTGGAAGAATTCACGCT....................................................................................................................................................................................2412688.00268800000000000000000000000000000000000001110301026000310000000000000000000000000000000000001010000000000000000000000000100000000200000000000000000036832114231000000000000710700000000002000000009100000000000002000000000001300000020000100005103010003902000001000000000000000134536227798521840600116910414285301412428163012107800149000000000006830010000000
.........................................................................................................AATGGCACTGGAAGAATTCAT.......................................................................................................................................................................................2112670.002670000041000000100000000022002000000000011100012402540000000000000000000000000000001000000040040011300029300110000010004201000017063000000001000000210415220120000000000224402801422219025027000000932195000201300001021000001000221758631069460000300003306111000192701800000290000000000000012520827135273009470200110063623401019908428143669015211401971400000000000712458514232927010000
..........................................................................................................ATGGCACTGGAAGAATTCACG......................................................................................................................................................................................2112625.00262500000000011100300100100100012026151000011305301231113210001000000000000000000000000006500090214312914101835414030002311115212701031180302300121010800000043328430241000000000045570462114220292454820000017021112000712990001007003200000173105372220122846251000011100210420000480600000600000000000000045311151592718865103000322020250834052142291406210035173000000000000521515924234139000024
............................................................................................................GGCACTGGAAGAATTCACGGG....................................................................................................................................................................................2111986.001986000000000000000000001130000010000000103221200020032231000210000000000000000000000000030000000000212031000000000010000000000000000000722061172004108291414122634200000100000110011000201100000301396712005070000001412002000110631932380010110000100000820100000100000000000000000000000069454251632919229149030004843111052032532790611132919350000001000021227668600000127
.........................................................................................................AATGGCACTGGAAGAATTCAATC.....................................................................................................................................................................................2311766.0017660000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000170458000000000000000000000000000000000000020002000000000000000000000000000000000000000000000000000000
.........................................................................................................AATGGCACTGGAAGAATTCAG.......................................................................................................................................................................................2111743.0017430000000000000000000000000010000000000000001000006100000000000000000000000000000000000000000000000000110000100011000000000000000000000000000000000012110000000000000008110300080003626100000021120000001000000000000000000014320011000000010000201600005305000008000000000000000781957312684372226500000607254141616110411512282506546103450000000000042363447000000
.............................................................................................................GCACTGGAAGAATTCACGGG....................................................................................................................................................................................2011610.00161000000000110000000000413000000000000011013111002121563100000000000000000000000000000000000000000000300000000000000000000000000000001223000200000005211716127261101000000000042001010050010001020041322300501632062890010000005313283830210630000000004300000000000000000000000000000000865361782181255710300077491510000121021157012410130000000000081842169120000152
.........................................................................................................AATGGCACTGGAAGAATTCACGTT....................................................................................................................................................................................2411468.001468000000000000000000001100000000000000411000212180012110000000000000000000000000000000000000001000000000000000000000000000000200000002000000000000151528003211110000000024000000120114000020050910000041000006700000001045373101261060005000100141000550200000400000000000000021212811907050012413151814752081313312202326001760000000000113049613624288561000020
.........................................................................................................AATGGCACTGGAAGAATTCACAT.....................................................................................................................................................................................2311418.00141800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000001000000010000000000100000000000000000000000000000011000000000001324460000000000010000000000000000000000000002040000000300210000001010010000000000000000001711322000000
..........................................................................................................ATGGCACTGGAAGAATTCAC.......................................................................................................................................................................................2011395.00139500000000000000000200100200010115910000000100000000000000000000000000000000000010030000000213612122200372400000000000040105000121102015000100200000000063020003020000200000354902302811116034060000000442080000708000000020000000001510524166111022115000000002001310001602000004000000000000000171611356151155310000014111012350105144135034006813000000000003490389143816000010
............................................................................................................GGCACTGGAAGAATTCACGG.....................................................................................................................................................................................2011365.00136500000000000000000000170000000000000100000011010100020000000000000000000000000000000000000110000100000000000000000000000000000000000011020800000111869647080000000001000100002200000000001018367400016014500000151400000020027833451000100000000000020000000000100000100000000000000064351211382717110730000045022112000719201100177130000000000099525320000017
.........................................................................................................AATGGCACTGGAAGAATTCACGAC....................................................................................................................................................................................2411306.0013060000000000000000000000000000000000000000021002000350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010221002011000000000001004000000000000000001010000000000000000000000000005000000000000103615500200000000010000000000000000000000017041130300000133201100121818303000000000000000000000001000000
.........................................................................................................AATGGCACTGGAAGAATTCATC......................................................................................................................................................................................2211274.0012740000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000020100000000000000000002000000000000000000102000001000110000000010000000000000000000000000000000000000000112590000000000003101000000000000000000000080108020000012400000020021601100000000000000000100000000000
.........................................................................................................AATGGCACTGGAAGAATTCC........................................................................................................................................................................................2011264.001264000000000000000000000000001000000000100002070003156510000000000000000000000000000000000000001002000000000000000000002311300010101108130020000010000001040312122000000000001523080010000204000000100700001020010000000000000010720001020100001500011014240001015020000030000000000000007425371131060000086115334181401412133333001227000023000000000001021139101315010010
.........................................................................................................AATGGCACTGGAAGAATTCACGGGAA..................................................................................................................................................................................2611191.0011910000000000000000000010000000000000000000101001100100000000000000000000000000000000000000001000001003050000000000000020000012000000000000000000001403150000010000000007607101407012018000000320700003160100005000000010052421760330192631719110045056001101000001301000002000000000000000633727853122030001591189243010417801918022123000000000000198920091115000030
............................................................................................................GGCACTGGAAGAATTCACG......................................................................................................................................................................................1911000.0010000000000000000000000023000000000000000000010010000100000000000000000000000000000000000000102000002000100000000000000000000000000000000000000000002986793050000000000001000001000000000000021727100020112700000020020000031042980000000000000000110000000000000000000000000000000048284241191614010560200057362050020213504502559000000000009941435010000
...........................................................................................................TGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................221981.0098100000000020000000010020000000000000000010020010021000000100000000000000000000000110159000441403618810161110310000117709000000000000102000024201000002310000501100000000001102101001101000000006020200208100000870000001009483136663142100000000730110000110100000100000000000000018174230238326000000201372102047660101600962200000000000282414624284201000110
.........................................................................................................AATGGCACTGGAAGAATTCACGAT....................................................................................................................................................................................241969.0096900000000001000000000000000000000000000000100001010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000010000000000000000000000010000000000000000000000010141010010000007501350000000000010000000020000000000000000315020000000201201000100282021000000000000000012140021000000
droSim2
A---------------GTGACAAAAGAAG-----AAAAGAAAATAT----------------------ACCATCTAATG----GTATATAGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAAACA-------------------TC----------------CAAAA--TGAAACGAAATCCA-AAACAATCA-A-AGTT-A---AAAACGTGCTAA----------T------G-----------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.........................................................................................................AATGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................2411145961.00114596113080913205412953372026936392822883174422024613442348332460413231371552444151131
.........................................................................................................AATGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................231429731.00429731639394258510634419111199791162601419377636505713152197746161520670112261
.........................................................................................................AATGGCACTGGAAGAATTCACG......................................................................................................................................................................................221222375.00222375128845475110422151653216678272946145353380812782151649471058
.........................................................................................................AATGGCACTGGAAGAATTCAC.......................................................................................................................................................................................211163389.0016338988521897732608237737506126371445299124884730180431417112
.........................................................................................................AATGGCACTGGAAGAATTCACGGGT...................................................................................................................................................................................25134397.0034397170913381932540013820139037024874213181291024152757
.........................................................................................................AATGGCACTGGAAGAATTCACGGGA...................................................................................................................................................................................25131889.00318891163664382578180003514526157638925815418467681126
.........................................................................................................AATGGCACTGGAAGAATTCA........................................................................................................................................................................................20128841.0028841103230131308111911541040812466548386853151378030
.........................................................................................................AATGGCACTGGAAGAATTC.........................................................................................................................................................................................19119127.001912795012565743791595220642076996272024430112
.........................................................................................................AATGGCACTGGAAGAATT..........................................................................................................................................................................................1814882.0048821064149161814244203492312875100000
....................................................................................................................................................CGTGATCTCTTAGTGGCATCTA...........................................................................................................................................2214056.0040563581023089104427713402741502268203
.........................................................................................................AATGGCACTGGAAGAATTCACGGGG...................................................................................................................................................................................2513025.00302512849534865781005047419304001
.........................................................................................................AATGGCACTGGAAGAATTCACGGT....................................................................................................................................................................................2412831.002831146106315400979108155317020511841319
.........................................................................................................AATGGCACTGGAAGAATTCACGGGAA..................................................................................................................................................................................2612383.002383114668523550057131395541718000
.........................................................................................................AATGGCACTGGAAGAAT...........................................................................................................................................................................................1712358.002358000000226219671899001000
..........................................................................................................ATGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................2312153.0021531801931217267228947916165919837010
.........................................................................................................AATGGCACTGGAAGAATTCACGGGC...................................................................................................................................................................................2511698.0016982401383550043647415223131701110
.........................................................................................................AATGGCACTGGAAGAATTCACGGA....................................................................................................................................................................................2411372.00137223218810218002382442815124936137100
.........................................................................................................AATGGCACTGGAAGA.............................................................................................................................................................................................1521200.50240100000058111172224000000
.............................................................................................................GCACTGGAAGAATTCACGGG....................................................................................................................................................................................2011113.0011131801602128111322112500300000
....................................................................................................................................................CGTGATCTCTTAGTGGCATCT............................................................................................................................................2111045.0010451563745525818413334263100100
.........................................................................................................AATGGCACTGGAAGAATTCACGGC....................................................................................................................................................................................2411016.0010162272051758008011031161282735010
.........................................................................................................AATGGCACTGGAAGAATTCACGT.....................................................................................................................................................................................231939.00939111441160028341015445116002
..........................................................................................................ATGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................221920.00920135833417129814254140511000
............................................................................................................GGCACTGGAAGAATTCACGGG....................................................................................................................................................................................211836.0083689146301301786401000
.........................................................................................................AATGGCACTGGAAGAATTCACA......................................................................................................................................................................................221635.0063577224900147234434446603000
............................................................................................................GGCACTGGAAGAATTCACGG.....................................................................................................................................................................................201559.0055910207330111530100000
.........................................................................................................AATGGCACTGGAAGAATTCACGA.....................................................................................................................................................................................231526.0052695491250010917919830326000
............................................................................................................GGCACTGGAAGAATTCACG......................................................................................................................................................................................191375.003751001212100367000000
..........................................................................................................ATGGCACTGGAAGAATTCACG......................................................................................................................................................................................211375.0037518102234129763215201000
.........................................................................................................AATGGCACTGGAAGAATTCAA.......................................................................................................................................................................................211364.00364558590058110495261200000
.............................................................................................................GCACTGGAAGAATTCACGG.....................................................................................................................................................................................191355.003557356201124611190000000
.........................................................................................................AATGGCACTGGAAGAATTCACGGAA...................................................................................................................................................................................251339.003391937672009289300210000
...............................................................................................................ACTGGAAGAATTCACGGG....................................................................................................................................................................................181333.003331516124009515262400000
.........................................................................................................AATGGCACTGGAAGAATTCACGC.....................................................................................................................................................................................231317.003178244730065689530400000
.........................................................................................................AATGGCACTGGAAGAATTCACT......................................................................................................................................................................................221251.002513711050056126127303000
.............................................................................................................GCACTGGAAGAATTCACG......................................................................................................................................................................................181191.00191112310161433147000000
.........................................................................................................AATGGCACTGGAAGAATTCACGGGTA..................................................................................................................................................................................261187.001875329910012526410218000
..............................................................................................................CACTGGAAGAATTCACGGG....................................................................................................................................................................................191186.001863548481008164320300000
............................................................................................................GGCACTGGAAGAATTCAC.......................................................................................................................................................................................181175.001750001520001165100000
...........................................................................................................TGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................221171.0017119139380116543215001000
..........................................................................................................ATGGCACTGGAAGAATTCAC.......................................................................................................................................................................................201155.00155112156251557103101000
....................................................................................................................................................CGTGATCTCTTAGTGGCATC.............................................................................................................................................201153.0015370124908471001100000
..............................................................................................................CACTGGAAGAATTCACGG.....................................................................................................................................................................................181140.001403843131001714608000000
.........................................................................................................AATGGCACTGGAAGAA............................................................................................................................................................................................162128.00256000000305200174000000
.........................................................................................................AATGGCACTGGAAGAATTCAG.......................................................................................................................................................................................211122.001222101005755004200000
................................................................................................................CTGGAAGAATTCACGGG....................................................................................................................................................................................171116.0011600000012223475000000
.........................................................................................................AATGGCACTGGAAGAATTCACGGTT...................................................................................................................................................................................251107.001071310010020291021029001
.........................................................................................................AATGGCACTGGAAGAATTCAT.......................................................................................................................................................................................211102.001023001002662125101000
...............................................................................................................ACTGGAAGAATTCACGG.....................................................................................................................................................................................17197.0097000000211192000000
.........................................................................................................AATGGCACTGGAAGAATTCACC......................................................................................................................................................................................22178.007873200016315112100000
.........................................................................................................AATGGCACTGGAAGAATTCACGGGAC..................................................................................................................................................................................26176.007640132000513201000000
.........................................................................................................AATGGCACTGGAAGAATTCACGGGGT..................................................................................................................................................................................26176.0076441114181615011100000
..........................................................................................................ATGGCACTGGAAGAATTCACGGGT...................................................................................................................................................................................24174.007442020001828001010000
...............................................................................................................ACTGGAAGAATTCACG......................................................................................................................................................................................16172.0072000000001071000000
.........................................................................................................AATGGCACTGGAAGAATTCACGGTA...................................................................................................................................................................................25168.00686313001329212008000
..........................................................................................................ATGGCACTGGAAGAATTCACGGGA...................................................................................................................................................................................24165.006514133220028011001000
.............................................................................................................GCACTGGAAGAATTCAC.......................................................................................................................................................................................17163.0063000000450252000000
.........................................................................................................AATGGCACTGGAAGAATTCACGGGTAT.................................................................................................................................................................................27160.006011144000313230037000
..........................................................................................................ATGGCACTGGAAGAATTCA........................................................................................................................................................................................19157.00575003112610002000000
...........................................................................................................TGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................21155.00555202501215003110000
....................................................................................................................................................CGTGATCTCTTAGTGGCA...............................................................................................................................................18150.00501121009621007100001
..............................................................................................................CACTGGAAGAATTCACG......................................................................................................................................................................................17148.004800000018124014000000
.........................................................................................................AATGGCACTGGAAGAATTCACGGGAAT.................................................................................................................................................................................27147.00471422000018200000000
...........................................................................................................TGGCACTGGAAGAATTCACG......................................................................................................................................................................................20147.0047310251118106000000
................................................................................................................CTGGAAGAATTCACGG.....................................................................................................................................................................................16144.0044000000223235000000
....................................................................................................................................................CGTGATCTCTTAGTGGCATCTAA..........................................................................................................................................23140.0040312710041000210000
.........................................................................................................AATGGCACTGGAAGAATTCACAA.....................................................................................................................................................................................23139.0039300000619380000000
.........................................................................................................AATGGCACTGGAAGAATTCACGGGAG..................................................................................................................................................................................26138.00381613410021001000000
.............................................................................................................GCACTGGAAGAATTCACGGGA...................................................................................................................................................................................21137.00371612600000003000000
droSec2
AA-------------AGTGACAAAACAAG-----GA--------AT----------------------ACCTTCTAATG----GTATATAGATCTCGACACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAAACA-------------------TC----------------CAAAG--TGAAACGAAATCCG-AAACAATCA-A-AGTT-A---AAAATGTGCTAA----------T------G-----------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.........................................................................................................AATGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................241268160.00268160475248172210927929635
.........................................................................................................AATGGCACTGGAAGAATTCACG......................................................................................................................................................................................22199540.00995401673451851849022465
.........................................................................................................AATGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................23196294.009629423365475341110214293
.........................................................................................................AATGGCACTGGAAGAATTCAC.......................................................................................................................................................................................21164138.0064138468332658346823329
.........................................................................................................AATGGCACTGGAAGAATTCA........................................................................................................................................................................................20127898.002789820201459762210659
.........................................................................................................AATGGCACTGGAAGAATTCACGGGT...................................................................................................................................................................................25117352.001735215071075220113082
.........................................................................................................AATGGCACTGGAAGAATTC.........................................................................................................................................................................................1917294.0072942242516644490
..........................................................................................................ATGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................2315472.005472478212949863
.........................................................................................................AATGGCACTGGAAGAATTCACGGGA...................................................................................................................................................................................2515056.005056539237510431099
.........................................................................................................AATGGCACTGGAAGAATTCACGGT....................................................................................................................................................................................2412652.0026525171493146496
..........................................................................................................ATGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................2212597.0025972444595044
..........................................................................................................ATGGCACTGGAAGAATTCACG......................................................................................................................................................................................2111921.0019211805433340
.........................................................................................................AATGGCACTGGAAGAATTCACGT.....................................................................................................................................................................................2311276.0012761587269383
....................................................................................................................................................CGTGATCTCTTAGTGGCATCTA...........................................................................................................................................2211063.001063938184346
.........................................................................................................AATGGCACTGGAAGAATTCACA......................................................................................................................................................................................221715.007155935420282
..........................................................................................................ATGGCACTGGAAGAATTCAC.......................................................................................................................................................................................201558.00558495181728
.........................................................................................................AATGGCACTGGAAGAATTCACGGGC...................................................................................................................................................................................251490.004907916119654
.........................................................................................................AATGGCACTGGAAGAATTCACGGA....................................................................................................................................................................................241443.00443742049570
.........................................................................................................AATGGCACTGGAAGAATTCACGGC....................................................................................................................................................................................241436.004367920710941
.........................................................................................................AATGGCACTGGAAGAATTCACT......................................................................................................................................................................................221432.00432452345148
.........................................................................................................AATGGCACTGGAAGAATTCACGGTT...................................................................................................................................................................................251389.0038933286268
.........................................................................................................AATGGCACTGGAAGAATT..........................................................................................................................................................................................181378.00378372512304
...........................................................................................................TGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................221295.002952714155
.........................................................................................................AATGGCACTGGAAGAATTCACGA.....................................................................................................................................................................................231234.002344595688
.........................................................................................................AATGGCACTGGAAGAATTT.........................................................................................................................................................................................191220.0022012118090
..........................................................................................................ATGGCACTGGAAGAATTCA........................................................................................................................................................................................191197.001971765214
..........................................................................................................ATGGCACTGGAAGAATTCACGGGT...................................................................................................................................................................................241190.00190143181712
....................................................................................................................................................CGTGATCTCTTAGTGGCATCT............................................................................................................................................211178.00178272810419
...........................................................................................................TGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................211147.00147139710
.........................................................................................................AATGGCACTGGAAGAATTCACGC.....................................................................................................................................................................................231136.001362283823
.........................................................................................................AATGGCACTGGAAGAATTCAA.......................................................................................................................................................................................211133.00133751273
...........................................................................................................TGGCACTGGAAGAATTCACG......................................................................................................................................................................................201125.001251071314
.........................................................................................................AATGGCACTGGAAGAATTCACC......................................................................................................................................................................................221116.0011612801212
.........................................................................................................AATGGCACTGGAAGAATTCACGTT....................................................................................................................................................................................241109.00109764137
.........................................................................................................AATGGCACTGGAAGAATTCACGGGG...................................................................................................................................................................................251100.0010028421614
............................................................................................................GGCACTGGAAGAATTCACGGG....................................................................................................................................................................................21172.00724911111
..........................................................................................................ATGGCACTGGAAGAATTCACGGGA...................................................................................................................................................................................24172.007261074
.........................................................................................................AATGGCACTGGAAGAATTCACGGGAA..................................................................................................................................................................................26171.00711037717
.........................................................................................................AATGGCACTGGAAGAATTCT........................................................................................................................................................................................20168.0068542021
.........................................................................................................AATGGCACTGGAAGAATTCAT.......................................................................................................................................................................................21166.0066528627
.........................................................................................................AATGGCACTGGAAGAATTCACGGGTA..................................................................................................................................................................................26157.0057437412
.............................................................................................................GCACTGGAAGAATTCACGGG....................................................................................................................................................................................20150.0050263156
...........................................................................................................TGGCACTGGAAGAATTCAC.......................................................................................................................................................................................19146.004640321
............................................................................................................GGCACTGGAAGAATTCACG......................................................................................................................................................................................19136.003624624
.........................................................................................................AATGGCACTGGAAGAATTCACGGTA...................................................................................................................................................................................25134.003451919
..........................................................................................................ATGGCACTGGAAGAATTCACGGT....................................................................................................................................................................................23134.003431102
..........................................................................................................ATGGCACTGGAAGAATTC.........................................................................................................................................................................................18131.003125105
........................................................................................................TAATGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................25130.003030000
.........................................................................................................AATGGCACTGGAAGAATTCC........................................................................................................................................................................................20127.0027013113
............................................................................................................GGCACTGGAAGAATTCACGG.....................................................................................................................................................................................20126.002618611
.........................................................................................................AATGGCACTGGAAGAATTTT........................................................................................................................................................................................20126.002611609
droYak3
A---------------GTGACAAAACAAG-----AAAAGCAAATAT----------------------ACCAGCTGCTG----GTATATAGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTACTTTTTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAAACA-------------------TC----------------CAAA---TGAAACAAAATCCA-AATGAATCT-A-AGCT-G---AAAATGTGCTAA----------T------G-----------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.........................................................................................................AATGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................241377530.0037753025256249242726231402214704935173849517549416152
.........................................................................................................AATGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................23171261.00712611024213923334097185511734102183463159210
.........................................................................................................AATGGCACTGGAAGAATTCACG......................................................................................................................................................................................22140422.0040422253295064276603208770871427121651
.........................................................................................................AATGGCACTGGAAGAATTCAC.......................................................................................................................................................................................21127696.00276961600402849374281466534298860108
.........................................................................................................AATGGCACTGGAAGAATTCACGGGT...................................................................................................................................................................................2519776.00977632312133531163139485209867431768
.........................................................................................................AATGGCACTGGAAGAATTCA........................................................................................................................................................................................2019711.009711143171616048767262242540010
.........................................................................................................AATGGCACTGGAAGAATTCACGGGA...................................................................................................................................................................................2515457.0054571574427251762611444113316239
..........................................................................................................ATGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................2313793.003793192588356110218000799
.........................................................................................................AATGGCACTGGAAGAATTC.........................................................................................................................................................................................1912385.002385851195321394897020013
....................................................................................................................................................CGTGATCTCTTAGTGGCATCTA...........................................................................................................................................2212334.0023341301241854169915280140
.........................................................................................................AATGGCACTGGAAGAATTCACGGC....................................................................................................................................................................................2412189.002189472119861610188100010
..........................................................................................................ATGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................2211553.00155317148335122120100
.........................................................................................................AATGGCACTGGAAGAATTCACGGT....................................................................................................................................................................................2411391.00139111215614142513831864838
.........................................................................................................AATGGCACTGGAAGAATTCACGGGC...................................................................................................................................................................................2511246.0012465011113811061900011
..........................................................................................................ATGGCACTGGAAGAATTCACG......................................................................................................................................................................................2111042.001042310075132210000
.........................................................................................................AATGGCACTGGAAGAATTCACGT.....................................................................................................................................................................................231589.00589211141314331191650020
.........................................................................................................AATGGCACTGGAAGAATTCACGGA....................................................................................................................................................................................241440.00440258124145153800130
..........................................................................................................ATGGCACTGGAAGAATTCAC.......................................................................................................................................................................................201430.004300416310460000
.........................................................................................................AATGGCACTGGAAGAATTCACGGGG...................................................................................................................................................................................251378.0037821312127612110006
....................................................................................................................................................CGTGATCTCTTAGTGGCATCT............................................................................................................................................211308.0030826212053174140000
.........................................................................................................AATGGCACTGGAAGAATTCACA......................................................................................................................................................................................221293.00293144413219851160000
.........................................................................................................AATGGCACTGGAAGAATTCACGGGAA..................................................................................................................................................................................261255.002551931233011500010
.........................................................................................................AATGGCACTGGAAGAATTCACGC.....................................................................................................................................................................................231250.002501221731215441000
.........................................................................................................AATGGCACTGGAAGAATTCACT......................................................................................................................................................................................221224.00224434511767960000
...........................................................................................................TGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................221205.00205213929000600029
..........................................................................................................ATGGCACTGGAAGAATTCA........................................................................................................................................................................................191189.001890183002040000
..........................................................................................................ATGGCACTGGAAGAATTCACGGGT...................................................................................................................................................................................241133.0013321036030300016
.........................................................................................................AATGGCACTGGAAGAATTCACGA.....................................................................................................................................................................................231114.00114930240911310000
.........................................................................................................AATGGCACTGGAAGAATTCACGAC....................................................................................................................................................................................241113.001131010420150000
...........................................................................................................TGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................211107.00107196400050001
.........................................................................................................AATGGCACTGGAAGAATT..........................................................................................................................................................................................181107.001072241302035130000
.........................................................................................................AATGGCACTGGAAGAATTCACGGTT...................................................................................................................................................................................25194.0094315180511401100
.............................................................................................................GCACTGGAAGAATTCACGGG....................................................................................................................................................................................20191.0091282570001100020
.........................................................................................................AATGGCACTGGAAGAATTCACC......................................................................................................................................................................................22185.008554160226320000
............................................................................................................GGCACTGGAAGAATTCACGGG....................................................................................................................................................................................21182.00821342720270009
...........................................................................................................TGGCACTGGAAGAATTCACG......................................................................................................................................................................................20175.0075070000140000
.........................................................................................................AATGGCACTGGAAGAATTCAA.......................................................................................................................................................................................21174.0074111374718140000
....................................................................................................................................................CGTGATCTCTTAGTGGCATC.............................................................................................................................................20167.0067525820000000
.........................................................................................................AATGGCACTGGAAGAATTCAT.......................................................................................................................................................................................21160.00601031171640000
..........................................................................................................ATGGCACTGGAAGAATTCACGGGA...................................................................................................................................................................................24158.0058154100010001
....................................................................................................................................................CGTGATCTCTTAGTGGCATCC............................................................................................................................................21147.0047104600000000
........................................................................................................TAATGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................25146.00460361000000000
.........................................................................................................AATGGCACTGGAAGAATTCACGGGTA..................................................................................................................................................................................26146.004615610111120000
.........................................................................................................AATGGCACTGGAAGAATTCACGTT....................................................................................................................................................................................24146.0046218239210000
..............................................................................................................CACTGGAAGAATTCACGGG....................................................................................................................................................................................19137.0037606300700015
.........................................................................................................AATGGCACTGGAAGAATTCAG.......................................................................................................................................................................................21134.0034012600430000
..........................................................................................................ATGGCACTGGAAGAATTC.........................................................................................................................................................................................18130.0030129000000000
...............................................................................................................ACTGGAAGAATTCACGGG....................................................................................................................................................................................18129.00292111012100011
.........................................................................................................AATGGCACTGGAAGAATTCC........................................................................................................................................................................................20129.0029200022230000
.........................................................................................................AATGGCACTGGAAGAATTCACGGAA...................................................................................................................................................................................25127.00271311200100000
..........................................................................................................ATGGCACTGGAAGAATTCACGGT....................................................................................................................................................................................23126.0026023300000000
............................................................................................................GGCACTGGAAGAATTCACGG.....................................................................................................................................................................................20126.0026015200450000
.....................................................................................................................................................GTGATCTCTTAGTGGCATCTA...........................................................................................................................................21124.00241131000000000
droEre2
CAA-------------------------A-----AAAAGTAAATAT----------------------GCCATCTGATG----GTGTATAGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTACTTTTGA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAAACA-------------------TC----------------CGAA---TGAAACGAAATCCA-AAGCAATCA-A-AGTT-A---AAAATGTGCTAA----------T------G-----------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.........................................................................................................AATGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................241242187.00242187509372287623749651941394555116659
.........................................................................................................AATGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................231109673.001096733277349701311104446092199313552
.........................................................................................................AATGGCACTGGAAGAATTCACG......................................................................................................................................................................................221100786.00100786216818013090853503892387399
.........................................................................................................AATGGCACTGGAAGAATTCAC.......................................................................................................................................................................................21158132.00581324575846152879225274251098
.........................................................................................................AATGGCACTGGAAGAATTCA........................................................................................................................................................................................20124590.00245901972107581241227994434
.........................................................................................................AATGGCACTGGAAGAATTCACGGGT...................................................................................................................................................................................25116222.0016222170328316614090413913976
.........................................................................................................AATGGCACTGGAAGAATTC.........................................................................................................................................................................................1916118.00611817448912291329242
.........................................................................................................AATGGCACTGGAAGAATTCACGGGA...................................................................................................................................................................................2515642.005642829301736727281425219
..........................................................................................................ATGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................2315570.0055705166442313683136
..........................................................................................................ATGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................2213556.0035563417941513539
.........................................................................................................AATGGCACTGGAAGAATTCACGGT....................................................................................................................................................................................2412918.0029185884970101126976180
..........................................................................................................ATGGCACTGGAAGAATTCACG......................................................................................................................................................................................2112461.002461237003153340
.........................................................................................................AATGGCACTGGAAGAATTCACGT.....................................................................................................................................................................................2311850.0018502592234198226931
.........................................................................................................AATGGCACTGGAAGAATTCACT......................................................................................................................................................................................221728.0072854024102663740
.........................................................................................................AATGGCACTGGAAGAATTCACA......................................................................................................................................................................................221707.007076443073232790
....................................................................................................................................................CGTGATCTCTTAGTGGCATCTA...........................................................................................................................................221692.0069213014716932031030
..........................................................................................................ATGGCACTGGAAGAATTCAC.......................................................................................................................................................................................201519.0051945911125320
.........................................................................................................AATGGCACTGGAAGAATTCACGGC....................................................................................................................................................................................241504.00504981568301106141
.........................................................................................................AATGGCACTGGAAGAATTCACGGA....................................................................................................................................................................................241486.00486962481719511630
.........................................................................................................AATGGCACTGGAAGAATTCACGA.....................................................................................................................................................................................231370.0037080461791973
.........................................................................................................AATGGCACTGGAAGAATTCACGGGC...................................................................................................................................................................................251357.003576091220785947
...........................................................................................................TGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................221343.003433042057322
.........................................................................................................AATGGCACTGGAAGAATT..........................................................................................................................................................................................181305.0030541122741850
.........................................................................................................AATGGCACTGGAAGAATTCACGC.....................................................................................................................................................................................231293.00293231462312143
.........................................................................................................AATGGCACTGGAAGAATTCACGGTT...................................................................................................................................................................................251275.0027537350149801
..........................................................................................................ATGGCACTGGAAGAATTCA........................................................................................................................................................................................191219.002192010007110
...........................................................................................................TGGCACTGGAAGAATTCACGG.....................................................................................................................................................................................211209.00209201021140
..........................................................................................................ATGGCACTGGAAGAATTCACGGGT...................................................................................................................................................................................241184.001841612001470
.........................................................................................................AATGGCACTGGAAGAATTCAA.......................................................................................................................................................................................211163.00163819256870
.........................................................................................................AATGGCACTGGAAGAATTCACGGGG...................................................................................................................................................................................251150.0015037102364322
...........................................................................................................TGGCACTGGAAGAATTCACG......................................................................................................................................................................................201149.00149140010800
..........................................................................................................ATGGCACTGGAAGAATTCACGGGA...................................................................................................................................................................................241103.0010392000650
.........................................................................................................AATGGCACTGGAAGAATTCACGGGAA..................................................................................................................................................................................261102.001022213046300
.........................................................................................................AATGGCACTGGAAGAATTCACGTT....................................................................................................................................................................................241102.00102502647420
....................................................................................................................................................CGTGATCTCTTAGTGGCATCT............................................................................................................................................21192.0092191121629150
............................................................................................................GGCACTGGAAGAATTCACGGG....................................................................................................................................................................................21191.00914120720516
.........................................................................................................AATGGCACTGGAAGAATTCACC......................................................................................................................................................................................22177.00771025531240
............................................................................................................GGCACTGGAAGAATTCACGG.....................................................................................................................................................................................20155.0055380001430
.........................................................................................................AATGGCACTGGAAGAATTT.........................................................................................................................................................................................19255.00110502067360
.........................................................................................................AATGGCACTGGAAGAATTCACGGTA...................................................................................................................................................................................25154.0054301025241
..........................................................................................................ATGGCACTGGAAGAATTCACGGT....................................................................................................................................................................................23153.005348002120
.........................................................................................................AATGGCACTGGAAGAATTCACGGGTA..................................................................................................................................................................................26152.0052120103090
.........................................................................................................AATGGCACTGGAAGAATTCAT.......................................................................................................................................................................................21148.0048433020180
........................................................................................................TAATGGCACTGGAAGAATTCACGGG....................................................................................................................................................................................25147.004742300020
.........................................................................................................AATGGCACTGGAAGAATTCT........................................................................................................................................................................................20145.004570312590
.............................................................................................................GCACTGGAAGAATTCACGGG....................................................................................................................................................................................20143.0043240021151
...............................................................................................................ACTGGAAGAATTCACGGG....................................................................................................................................................................................18143.0043801320110
.........................................................................................................AATGGCACTGGAAGAATTCAG.......................................................................................................................................................................................21134.003423110630
..........................................................................................................ATGGCACTGGAAGAATTCACGT.....................................................................................................................................................................................22133.003330000210
............................................................................................................GGCACTGGAAGAATTCACG......................................................................................................................................................................................19130.0030140001420
.........................................................................................................AATGGCACTGGAAGAATTCACGCT....................................................................................................................................................................................24129.0029000136100

Generated: 10/20/2015 at 07:30 PM