ID:

dpe-mir-13b-2

 Coordinate:

scaffold_13:1553271-1553336 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

antisense_to_intron

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-39.2 -38.9

Flybase annnotation

Antisense to intron [Dper\GL12910-in]; intron [Dper\GL13090-in]; utr5 [utr5_plus_14494]; pre_miRNA [Dper\mir-13b-2-RM]; miRNA [Dper\miR-13b-2-RA]

No Repeatable elements found

mature

  1. dpe-mir-13b-1  scaffold_0:10659940-10659961 -
  2. dpe-mir-13b-2  scaffold_13:1553313-1553334 +
star

Sense Strand Reads

CCTCCACCCAACCATGCTGCTCTCATTCTGCTGCTACTGCTGCTGCACATTTACGCGTCAAAATGACTGTGAGCTATGTGTTTTTGATCTCATATCACAGCCATTTTGACGAGTTTGATGTGCAGTCCCACTCCATCAATGGCAGAGTGGAGCTTTTCCAGTGTTG

***************************************..((((((((((.((.((((((((((.((((((..((((............)))))))))).)))))))))).))..))))))))))...************************************* 		Read size # Mismatch Hit Count Total Norm Total V057

head

 M042

female body

 V050

head

 V042

embryo

 V111

male body		 M021

embryo
............................................................................................TATCACAGCCATTTTGACGAGT.................................................... 22 0 2 42942.50 85885 34867 13731 23317 9615 3996 359
............................................................................................TATCACAGCCATTTTGACGAGTT................................................... 23 0 2 29027.00 58054 19100 22277 9275 3839 3397 166
............................................................................................TATCACAGCCATTTTGACGAG..................................................... 21 0 2 2419.00 4838 902 1838 920 956 112 110
............................................................................................TATCACAGCCATTTTGACGAGTTT.................................................. 24 0 2 1174.50 2349 986 618 297 77 371 0
............................................................................................TATCACAGCCATTTTGACGAGTTA.................................................. 24 1 2 1117.50 2235 205 1576 77 313 56 8
.............................................................................................ATCACAGCCATTTTGACGAGTT................................................... 22 0 2 883.50 1767 54 1656 34 3 20 0
.............................................................................................ATCACAGCCATTTTGACGAGT.................................................... 21 0 2 539.00 1078 34 1016 20 1 7 0
......................................................GCGTCAAAATGACTGTGAGCTATG........................................................................................ 24 0 1 499.00 499 63 306 21 12 95 2
............................................................................................TATCACAGCCATTTTGACGAGTTAA................................................. 25 2 2 447.00 894 28 706 6 141 9 4
............................................................................................TATCACAGGCATTTTGACGAGTT................................................... 23 1 2 400.50 801 14 787 0 0 0 0
................................................................................................ACAGCCATTTTGACGAGT.................................................... 18 0 2 380.50 761 402 5 240 111 2 1
............................................................................................TATCACAGCCATTTTGACGAGC.................................................... 22 1 2 287.00 574 368 18 164 13 5 6
............................................................................................TATCACAGCCATTTTGACGA...................................................... 20 0 2 277.50 555 83 244 74 128 10 16
............................................................................................TATCACAGGCATTTTGACGAGT.................................................... 22 1 2 260.50 521 19 494 4 4 0 0
............................................................................................TATCACAGCCATTTTGACGCGT.................................................... 22 1 2 232.00 464 256 1 134 73 0 0
............................................................................................TATCACAGACATTTTGACGAGTT................................................... 23 1 2 227.50 455 69 349 8 28 1 0
............................................................................................TATCACAGACATTTTGACGAGT.................................................... 22 1 2 199.00 398 118 232 16 29 3 0
............................................................................................TAGCACAGCCATTTTGACGAGT.................................................... 22 1 2 194.50 389 343 0 41 5 0 0
............................................................................................TATCACAGCCATTTTGACGAGTTAAA................................................ 26 2 1 177.00 177 1 159 0 11 1 5
................................................................................................ACAGCCATTTTGACGAGTT................................................... 19 0 2 168.50 337 187 15 92 38 4 1
............................................................................................TATCACAGCCATTTTGCCGAGT.................................................... 22 1 2 154.50 309 202 0 95 12 0 0
............................................................................................TATCACAGCCATTTTGACGCGTT................................................... 23 1 2 145.50 291 189 1 69 30 2 0
............................................................................................TATCACAGCCATTTTGACGAGA.................................................... 22 1 2 135.50 271 78 100 73 18 1 1
............................................................................................TATCACAGCCATTTTGACGTGT.................................................... 22 1 2 120.00 240 190 2 21 27 0 0
............................................................................................TATCACAGCCATTTTGACGAGCT................................................... 23 1 2 110.50 221 148 19 43 6 4 1
............................................................................................TATCACAGTCATTTTGACGAGTT................................................... 23 1 2 106.50 213 38 167 5 2 1 0
............................................................................................TATCACAGCCCTTTTGACGAGT.................................................... 22 1 2 106.50 213 103 0 34 75 1 0
......................................................GCGTCAAAATGACTGTGAGCTAT......................................................................................... 23 0 1 103.00 103 9 62 6 5 21 0
............................................................................................TAGCACAGCCATTTTGACGAGTT................................................... 23 1 2 100.50 201 185 1 10 5 0 0
............................................................................................TATCACAGCCATTTTGACGAGG.................................................... 22 1 2 99.00 198 101 36 20 16 1 24
............................................................................................TATCACAGTCATTTTGACGAGT.................................................... 22 1 2 91.50 183 47 109 14 11 2 0
............................................................................................TATCACAGCCATTTTTACGAGT.................................................... 22 1 2 85.50 171 116 2 35 13 5 0
............................................................................................TATCACAGCCATTTTGACGAGTA................................................... 23 1 2 83.00 166 45 69 24 25 3 0
............................................................................................TATCACAGCCAGTTTGACGAGT.................................................... 22 1 2 82.50 165 143 0 19 3 0 0
............................................................................................TATCACAGCCATTTTGCCGAGTT................................................... 23 1 2 79.50 159 119 0 32 8 0 0
............................................................................................TATCACAGCCATTTTGACGTGTT................................................... 23 1 2 75.00 150 128 1 9 11 1 0
............................................................................................TATCACAGCCATTTTCACGAGT.................................................... 22 1 2 74.50 149 113 1 26 8 1 0
............................................................................................TATCACAGCCGTTTTGACGAGT.................................................... 22 1 2 73.50 147 102 4 24 12 5 0
............................................................................................TATCACAGCCATTTTGACTAGT.................................................... 22 1 2 73.00 146 87 8 33 6 4 8
............................................................................................TATCACAGCCATTTTGACGAGTTG.................................................. 24 1 2 71.50 143 11 82 9 28 0 13
............................................................................................TATCACAGCCATTTTGACG....................................................... 19 0 2 66.50 133 21 77 14 9 0 12
............................................................................................TATCACAGCCATTTTGACGAGGT................................................... 23 1 2 65.50 131 36 79 7 9 0 0
............................................................................................TATCACAGCCATTTTGACGAGTTC.................................................. 24 1 2 65.00 130 26 26 18 2 57 1
............................................................................................TATCACAGCCATTTTGACGATT.................................................... 22 1 2 64.50 129 90 5 28 5 1 0
.............................................................................................ATCACAGCCATTTTGACGAG..................................................... 20 0 2 61.50 123 0 123 0 0 0 0
............................................................................................TATCACAGCCATTTTGTCGAGT.................................................... 22 1 2 61.50 123 90 0 16 14 3 0
............................................................................................TATCAGAGCCATTTTGACGAGT.................................................... 22 1 2 60.00 120 36 0 82 2 0 0
............................................................................................TATCACAGCCATTTTAACGAGT.................................................... 22 1 2 57.50 115 65 3 38 7 2 0
............................................................................................TATCACAGCCATTTTGACGGGT.................................................... 22 1 2 56.00 112 72 4 25 7 4 0
............................................................................................TATCACAGCCATTTTGACAAGT.................................................... 22 1 2 56.00 112 37 2 59 12 2 0
............................................................................................TATCACAGCCACTTTGACGAGT.................................................... 22 1 2 55.50 111 65 4 27 13 2 0
............................................................................................TATCGCAGCCATTTTGACGAGT.................................................... 22 1 2 54.00 108 51 8 33 9 6 1
...........................................................................................CTATCACAGCCATTTTGACGAGT.................................................... 23 1 2 53.00 106 41 31 22 11 1 0
............................................................................................TATAACAGCCATTTTGACGAGT.................................................... 22 1 2 53.00 106 85 0 8 12 1 0
............................................................................................GATCACAGCCATTTTGACGAGT.................................................... 22 1 2 53.00 106 33 49 7 14 3 0
.............................................................................................ATCACAGCCATTTTGACGAGTTA.................................................. 23 1 2 51.50 103 0 101 0 2 0 0
............................................................................................TATCACAGCCATTTTGGCGAGT.................................................... 22 1 2 51.50 103 66 1 19 15 2 0
............................................................................................TATCACAGCCATTTTGTCGAGTT................................................... 23 1 2 50.00 100 82 1 11 6 0 0
............................................................................................TATCACAGCCCTTTTGACGAGTT................................................... 23 1 2 50.00 100 48 1 17 33 1 0
..............................................................................................TCACAGCCATTTTGACGAGTT................................................... 21 0 2 49.50 99 2 86 6 0 5 0
...........................................................................................CTATCACAGCCATTTTGACGAGTT................................................... 24 1 2 48.00 96 22 59 10 4 1 0
......................................................GCGTCAAAATGACTGTGAGCTA.......................................................................................... 22 0 1 46.00 46 5 33 1 0 7 0
............................................................................................TATCACAGGCATTTTGACGAG..................................................... 21 1 2 44.00 88 2 85 0 1 0 0
............................................................................................TATCACAGCCAGTTTGACGAGTT................................................... 23 1 2 44.00 88 72 1 10 5 0 0
............................................................................................TATCACAGCCATTTTTACGAGTT................................................... 23 1 2 43.00 86 67 3 11 4 1 0
............................................................................................GATCACAGCCATTTTGACGAGTT................................................... 23 1 2 42.50 85 18 61 1 5 0 0
............................................................................................TATCAAAGCCATTTTGACGAGT.................................................... 22 1 2 42.50 85 38 1 43 3 0 0
............................................................................................CATCACAGCCATTTTGACGAGT.................................................... 22 1 2 42.50 85 50 9 18 6 2 0
............................................................................................TATCACAGCCTTTTTGACGAGT.................................................... 22 1 2 42.50 85 63 1 15 6 0 0
............................................................................................TATCACAGCCATTTCGACGAGT.................................................... 22 1 2 41.50 83 46 2 29 4 2 0
............................................................................................TACCACAGCCATTTTGACGAGT.................................................... 22 1 2 40.00 80 46 1 22 9 2 0
............................................................................................TATCACAGCAATTTTGACGAGT.................................................... 22 1 2 40.00 80 57 1 12 9 1 0
............................................................................................TATCACAGCCGTTTTGACGAGTT................................................... 23 1 2 39.50 79 55 1 16 6 1 0
............................................................................................TATCACAGCCATTTTGACGAGTC................................................... 23 1 2 39.00 78 50 6 11 4 6 1
............................................................................................TATCACAGCCATTTTGACGATTT................................................... 23 1 2 38.00 76 38 25 9 1 3 0
............................................................................................TATCACAGCCATTTTCACGAGTT................................................... 23 1 2 38.00 76 54 3 16 3 0 0
............................................................................................TATCACATCCATTTTGACGAGT.................................................... 22 1 2 38.00 76 41 3 16 6 8 2
............................................................................................TATCACGGCCATTTTGACGAGT.................................................... 22 1 2 37.50 75 45 4 16 8 2 0
............................................................................................TATCACAGCCATTTTGACGACT.................................................... 22 1 2 37.50 75 58 4 12 1 0 0
............................................................................................TATCACAGCCATGTTGACGAGT.................................................... 22 1 2 37.00 74 61 3 6 1 0 3
............................................................................................AATCACAGCCATTTTGACGAGT.................................................... 22 1 2 36.00 72 45 10 11 5 1 0
............................................................................................TATCACACCCATTTTGACGAGT.................................................... 22 1 2 36.00 72 43 6 15 5 2 1
............................................................................................TATCACAGCCATTTTGACGGGTT................................................... 23 1 2 35.50 71 39 15 10 5 2 0
............................................................................................TATCACAGCCATTTTGGCGAGTT................................................... 23 1 2 35.00 70 49 5 7 6 3 0
............................................................................................TATCACAGCCATTTTGACTAGTT................................................... 23 1 2 34.50 69 43 13 8 2 2 1
............................................................................................TATCACAGCCATTTTGACGAGTAA.................................................. 24 2 2 34.00 68 11 39 3 13 2 0
............................................................................................TATCACAGCCATTCTGACGAGT.................................................... 22 1 2 34.00 68 47 1 14 4 2 0
............................................................................................TATCATAGCCATTTTGACGAGT.................................................... 22 1 2 34.00 68 16 2 41 8 1 0
......................................................GCGTCAAAATGACTGTGAGCT........................................................................................... 21 0 1 34.00 34 10 19 0 0 4 1
............................................................................................TATCACAGCCATTTTGACGAGAT................................................... 23 1 2 33.50 67 24 22 13 8 0 0
............................................................................................TATCACAGCCATTGTGACGAGT.................................................... 22 1 2 33.50 67 52 1 6 8 0 0
............................................................................................TATCACAGCCATCTTGACGAGT.................................................... 22 1 2 33.50 67 39 2 20 2 4 0
.............................................................................................ATCACAGCGATTTTGACGAGTT................................................... 22 1 2 33.00 66 0 66 0 0 0 0
............................................................................................TATCACACCCATTTTGACGAGTT................................................... 23 1 2 32.50 65 34 19 8 3 1 0
..............................................................................................TCACAGCCATTTTGACGAGT.................................................... 20 0 2 32.00 64 8 41 8 6 1 0
............................................................................................TAACACAGCCATTTTGACGAGT.................................................... 22 1 2 31.50 63 51 0 6 5 1 0
.......................................................CGTCAAAATGACTGTGAGCTATG........................................................................................ 23 0 1 31.00 31 0 31 0 0 0 0
............................................................................................CATCACAGCCATTTTGACGAGTT................................................... 23 1 2 30.50 61 23 14 16 3 5 0
............................................................................................TATCACAGCCACTTTGACGAGTT................................................... 23 1 2 30.50 61 38 6 10 3 3 1
.............................................................................................ATCACAGCCATTTTGACGAGTTAA................................................. 24 2 2 29.00 58 0 58 0 0 0 0
............................................................................................TATCACAGCCATTTTGCCGCGT.................................................... 22 2 2 28.50 57 43 0 12 2 0 0
............................................................................................TATCACAGCTATTTTGACGAGT.................................................... 22 1 2 28.50 57 33 2 20 2 0 0
............................................................................................TATCGCAGCCATTTTGACGAGTT................................................... 23 1 2 28.00 56 28 11 7 6 4 0
............................................................................................TATCACAGCCATTTTGAC........................................................ 18 0 2 27.50 55 6 9 0 1 0 39
............................................................................................TATCACAGCCATTTTGACCAGT.................................................... 22 1 2 27.00 54 35 3 13 2 1 0
............................................................................................TATCACAACCATTTTGACGAGT.................................................... 22 1 2 27.00 54 32 4 13 5 0 0
............................................................................................TATCAGAGCCATTTTGACGAGTT................................................... 23 1 2 27.00 54 23 2 27 2 0 0
.............................................................................................ATCACAGCCATTTTGACGAGTTT.................................................. 23 0 2 26.50 53 1 48 0 0 4 0
............................................................................................TATCACAGGCATTTTGACGAGTTA.................................................. 24 2 2 26.50 53 0 53 0 0 0 0
............................................................................................TATCACAGCCATTTTGACGAGTTAAAA............................................... 27 3 1 25.00 25 0 24 0 1 0 0
............................................................................................TATCACGGCCATTTTGACGAGTT................................................... 23 1 2 24.00 48 30 5 8 4 1 0
............................................................................................TATCACAGCCATTTTAACGAGTT................................................... 23 1 2 24.00 48 27 3 12 6 0 0
............................................................................................TGTCACAGCCATTTTGACGAGT.................................................... 22 1 2 24.00 48 32 0 12 3 1 0
............................................................................................TATCACAGCCATTTTGACAAGTT................................................... 23 1 2 24.00 48 15 3 20 8 1 1
............................................................................................AATCACAGCCATTTTGACGAGTT................................................... 23 1 2 23.50 47 17 24 1 1 4 0
............................................................................................TATCACAGCAATTTTGACGAGTT................................................... 23 1 2 23.50 47 30 0 10 5 2 0
............................................................................................TATCACAGCCATCTTGACGAGTT................................................... 23 1 2 23.00 46 31 3 8 2 1 1
............................................................................................TACCACAGCCATTTTGACGAGTT................................................... 23 1 2 22.00 44 24 6 7 5 2 0
............................................................................................TATCATAGCCATTTTGACGAGTT................................................... 23 1 2 22.00 44 14 5 21 3 1 0
............................................................................................TATAACAGCCATTTTGACGAGTT................................................... 23 1 2 22.00 44 35 1 8 0 0 0
............................................................................................TATCACAGCCATTTTGAAGAGT.................................................... 22 1 3 21.33 64 35 0 18 11 0 0
............................................................................................TATCAAAGCCATTTTGACGAGTT................................................... 23 1 2 21.00 42 26 0 14 2 0 0
............................................................................................TATCACATCCATTTTGACGAGTT................................................... 23 1 2 21.00 42 16 7 8 1 10 0
............................................................................................TATCACAGCCATTTGGACGAGT.................................................... 22 1 2 20.50 41 34 0 5 2 0 0
............................................................................................TATCACAGCCATTTTGACGACTT................................................... 23 1 2 20.50 41 32 4 4 1 0 0
............................................................................................TATCACAGCCATTTTGACGAAT.................................................... 22 1 2 20.00 40 11 3 19 7 0 0
............................................................................................TATCACAGCCTTTTTGACGAGTT................................................... 23 1 2 20.00 40 34 3 0 3 0 0
............................................................................................TATTACAGCCATTTTGACGAGT.................................................... 22 1 2 20.00 40 20 2 15 3 0 0
............................................................................................TAGCACAGCCGTTTTGACGAGT.................................................... 22 2 2 20.00 40 37 0 3 0 0 0
............................................................................................TATCACAGACATTTTGACGAG..................................................... 21 1 2 20.00 40 0 34 1 5 0 0
.............................................................................................ATCACAGCGATTTTGACGAGT.................................................... 21 1 2 19.50 39 0 39 0 0 0 0
............................................................................................TATCACAGCCATTTTGCCGAGC.................................................... 22 2 2 18.50 37 25 0 12 0 0 0
............................................................................................TAGCACAGCCATTTTCACGAGT.................................................... 22 2 2 18.00 36 32 0 4 0 0 0
............................................................................................TATCACAGCCATTTTGCCGCGTT................................................... 23 2 2 17.50 35 28 0 6 1 0 0
............................................................................................TATCACAGCCATTTCGACGAGTT................................................... 23 1 2 17.50 35 22 3 6 3 1 0
............................................................................................TATCACAGCCATTTTGACGCGC.................................................... 22 2 2 17.50 35 19 0 14 2 0 0
......................................................GCGTCAAAATGACTGTGAGC............................................................................................ 20 0 1 17.00 17 1 10 1 0 5 0
............................................................................................TATCACAGCTATTTTGACGAGTT................................................... 23 1 2 17.00 34 21 2 7 2 2 0
............................................................................................TAGCACAGCCATTTTGACGAGC.................................................... 22 2 2 16.50 33 32 0 1 0 0 0
............................................................................................TATGACAGCCATTTTGACGAGT.................................................... 22 1 2 16.50 33 30 0 1 1 1 0
............................................................................................TATCCCAGCCATTTTGACGAGT.................................................... 22 1 2 16.50 33 26 0 2 5 0 0
............................................................................................TAACACAGCCATTTTGACGAGTT................................................... 23 1 2 16.00 32 24 3 2 3 0 0
............................................................................................TATCACAGACATTTTGACGAGTTA.................................................. 24 2 2 16.00 32 1 31 0 0 0 0
............................................................................................TCTCACAGCCATTTTGACGAGT.................................................... 22 1 2 15.50 31 25 0 3 2 1 0
...............................................................................................CACAGCCATTTTGACGAGT.................................................... 19 0 2 15.50 31 3 14 4 5 5 0
............................................................................................TATCACCGCCATTTTGACGAGT.................................................... 22 1 2 15.50 31 20 0 6 5 0 0
.............................................................................................ATCACAGCAATTTTGACGAGTT................................................... 22 1 2 15.50 31 0 31 0 0 0 0
............................................................................................TGTCACAGCCATTTTGACGAGTT................................................... 23 1 2 15.50 31 22 1 8 0 0 0
............................................................................................TATCACAGCCATTATGACGAGT.................................................... 22 1 2 15.00 30 22 0 7 1 0 0
......................................................GCGTCAAAGTGACTGTGAGCTATG........................................................................................ 24 1 1 15.00 15 0 15 0 0 0 0
............................................................................................TATCACAGCCATGTTGACGAGTT................................................... 23 1 2 14.00 28 25 2 1 0 0 0
............................................................................................TATCACAGCCATTTTGACGCG..................................................... 21 1 2 14.00 28 15 0 2 11 0 0
............................................................................................TATTACAGCCATTTTGACGAGTT................................................... 23 1 2 14.00 28 15 4 4 2 3 0
.............................................................................................ATCACAGCCATTTTGACGAGTTAAA................................................ 25 2 1 14.00 14 0 13 0 0 1 0
............................................................................................TATAACAGCCATTTTGACGAGC.................................................... 22 2 2 13.50 27 21 0 6 0 0 0
............................................................................................TAGCACAGCCATTGTGACGAGT.................................................... 22 2 2 13.50 27 25 0 2 0 0 0
............................................................................................TATCACTGCCATTTTGACGAGT.................................................... 22 1 2 13.50 27 10 1 10 2 4 0
......................................................GCGTCAAAATGACTGTGAGCTATGT....................................................................................... 25 0 1 13.00 13 0 9 0 0 4 0
............................................................................................TATCACAGCCATTCTGACGAGTT................................................... 23 1 2 12.50 25 15 4 3 2 1 0
............................................................................................TATCACCGCCATTTTGACGAGTT................................................... 23 1 2 12.50 25 22 0 2 1 0 0
............................................................................................TATCACAACCATTTTGACGAGTT................................................... 23 1 2 12.50 25 17 2 1 2 3 0
............................................................................................TATCACAGTCATTTTGACGAG..................................................... 21 1 2 12.00 24 1 21 1 0 0 1
............................................................................................TAGCACAGCCATTTTGACGTGT.................................................... 22 2 2 12.00 24 21 0 2 1 0 0
...........................................................................................ATATCACAGCCATTTTGACGAGT.................................................... 23 0 2 12.00 24 4 12 4 2 2 0
............................................................................................TATCACAGGCATTTTGACGAGTTAA................................................. 25 3 2 12.00 24 0 24 0 0 0 0
...................................................TACGCGTCAAAATGACTGTG............................................................................................... 20 0 1 12.00 12 3 2 2 0 0 5
............................................................................................TATCACAGCCATTTTGACCAGTT................................................... 23 1 2 12.00 24 12 3 6 3 0 0
.............................................................................................ATCACAGCAATTTTGACGAGT.................................................... 21 1 2 11.50 23 0 23 0 0 0 0
............................................................................................TATCACAGGCATTTTGACGAGTTT.................................................. 24 1 2 11.50 23 1 22 0 0 0 0
............................................................................................TATCACAGCCATTTTGACGAGTTTT................................................. 25 1 2 11.50 23 6 8 3 0 6 0
............................................................................................TAGCACAGCCATTTTGACGTGTT................................................... 23 2 2 11.50 23 22 0 0 1 0 0
............................................................................................TATCACAGCGATTTTGACGAGT.................................................... 22 1 2 11.50 23 14 0 6 2 1 0
............................................................................................TATCACAGCCAGTTTGACGAGG.................................................... 22 2 2 11.50 23 20 0 3 0 0 0
...........................................................................................TTATCACAGCCATTTTGACGAGTT................................................... 24 1 2 11.00 22 0 22 0 0 0 0
............................................................................................TAGCACAGCCAGTTTGACGAGT.................................................... 22 2 2 11.00 22 21 0 1 0 0 0
............................................................................................TATCACAGCCATTTTGACGAATT................................................... 23 1 2 11.00 22 7 3 9 3 0 0
............................................................................................TATCACAGCCATTGTGACGAGTT................................................... 23 1 2 11.00 22 19 0 2 1 0 0
............................................................................................TATCACAGCCATTTTGAAGAGTT................................................... 23 1 3 11.00 33 18 3 10 2 0 0
............................................................................................TAGCACAGCCATTTTGACGAGCT................................................... 23 2 2 11.00 22 21 0 0 1 0 0
............................................................................................TATCACAGCCATTGTGACGAGC.................................................... 22 2 2 11.00 22 18 0 4 0 0 0
............................................................................................TATCACAGCGATTTTGACGAGTT................................................... 23 1 2 10.50 21 19 0 1 1 0 0
............................................................................................TATCACAGCCCTTTTGACGCGT.................................................... 22 2 2 10.50 21 12 0 4 5 0 0
............................................................................................TATCACAGGCATTTTGACGAGTTAAA................................................ 26 3 1 10.00 10 0 10 0 0 0 0
............................................................................................TATCCCAGCCATTTTGACGAGTT................................................... 23 1 2 10.00 20 18 1 1 0 0 0
...............................................................................................CACAGCCATTTTGACGAGTT................................................... 20 0 2 10.00 20 0 9 3 3 5 0
............................................................................................TATCTCAGCCATTTTGACGAGT.................................................... 22 1 2 10.00 20 11 1 5 3 0 0
............................................................................................TAGCACAGCCATTTTGTCGAGT.................................................... 22 2 2 9.50 19 13 0 3 3 0 0
............................................................................................TATCACAGCCATTTTGACGTG..................................................... 21 1 2 9.50 19 15 0 1 3 0 0
............................................................................................TATCACAGACATTTTGACGAGTTT.................................................. 24 1 2 9.50 19 7 12 0 0 0 0
............................................................................................TATCACTGCCATTTTGACGAGTT................................................... 23 1 2 9.50 19 11 3 4 1 0 0
............................................................................................TATCACAGCCATTTTCACGAGC.................................................... 22 2 2 9.50 19 12 0 7 0 0 0
............................................................................................TATCACAGCCATTTTGACGCGCT................................................... 23 2 2 9.50 19 13 0 6 0 0 0
............................................................................................TATCACAGCCATTTTGACTAG..................................................... 21 1 2 9.50 19 6 1 3 2 0 7
............................................................................................TATCACAGCCATTTTGAGGAGTT................................................... 23 1 3 9.33 28 15 0 7 3 3 0
...........................................................................................ATATCACAGCCATTTTGACGAGTT................................................... 24 0 2 9.00 18 1 17 0 0 0 0
................................................................................................ACAGCCATTTTGACGAGTTT.................................................. 20 0 2 9.00 18 12 1 5 0 0 0
............................................................................................TATCACAGCCATTTTGACGAGTAAA................................................. 25 3 2 9.00 18 1 16 0 1 0 0
............................................................................................TATCACAGGCATTTTGACGAGC.................................................... 22 2 2 9.00 18 4 13 1 0 0 0
............................................................................................TATCACAGCCATTTTGAGGAGT.................................................... 22 1 3 9.00 27 19 0 8 0 0 0
............................................................................................TATCACAGTCATTTTGACGAGTTA.................................................. 24 2 2 8.50 17 0 16 0 1 0 0
............................................................................................TATGACAGCCATTTTGACGAGTT................................................... 23 1 2 8.50 17 13 1 1 1 1 0
............................................................................................TATCACAGCCATTTTGACGCTT.................................................... 22 2 2 8.50 17 14 0 3 0 0 0
............................................................................................TAGCACAGACATTTTGACGAGT.................................................... 22 2 2 8.50 17 15 0 1 1 0 0
...........................................................................................GTATCACAGCCATTTTGACGAGTT................................................... 24 1 2 8.50 17 0 17 0 0 0 0
............................................................................................TATCACAGCCAGGTTGACGAGT.................................................... 22 2 2 8.50 17 13 0 3 1 0 0
............................................................................................TATCACAGTCATTTTGACGTGT.................................................... 22 2 2 8.00 16 14 0 0 2 0 0
............................................................................................TATCACAGGCATTTTGACGAGCT................................................... 23 2 2 8.00 16 0 16 0 0 0 0
............................................................................................TATCACAGCCATTTTTACTAGT.................................................... 22 2 2 8.00 16 12 0 3 1 0 0
............................................................................................TATCACAGCCATTTTGTCGTGT.................................................... 22 2 2 8.00 16 10 0 5 1 0 0
............................................................................................TAGCACAGCCATTTTGACGAGG.................................................... 22 2 2 7.50 15 13 0 2 0 0 0
............................................................................................TAGCACAGCCGTTTTGACGAGTT................................................... 23 2 2 7.50 15 14 0 1 0 0 0
............................................................................................TAGCACAGCCGTTTTGTCGAGT.................................................... 22 3 2 7.50 15 14 0 1 0 0 0
............................................................................................TATCACAGCCATATTGACGAGT.................................................... 22 1 2 7.50 15 9 3 3 0 0 0
...........................................................................................GTATCACAGCCATTTTGACGAGT.................................................... 23 1 2 7.50 15 0 15 0 0 0 0
............................................................................................TATCACAGCCATTTTGCCGAGCT................................................... 23 2 2 7.50 15 14 0 1 0 0 0
............................................................................................TATCACAGCCATTTTGACGATC.................................................... 22 2 2 7.50 15 12 1 2 0 0 0
............................................................................................TCTCACAGCCATTTTGACGAGTT................................................... 23 1 2 7.50 15 9 0 3 3 0 0
.............................................................................................ATCACAGCCATTTTGACGA...................................................... 19 0 2 7.00 14 0 14 0 0 0 0
...........................................................................................CTATCACAGCCATTTTGACGAG..................................................... 22 1 2 7.00 14 1 8 1 4 0 0
............................................................................................TATCACAGCCCTTTTGCCGAGT.................................................... 22 2 2 7.00 14 10 0 2 2 0 0
............................................................................................TATCACAGACATTTTGACGAGTTAA................................................. 25 3 2 7.00 14 1 12 0 1 0 0
............................................................................................TATCACAGCCATTTTGTCGTGTT................................................... 23 2 2 6.50 13 9 0 3 1 0 0
............................................................................................TATCACAGCCATTTTGACGAGTTAG................................................. 25 1 2 6.50 13 0 8 1 4 0 0
............................................................................................TATCACAGCCATTTTGACGAGTG................................................... 23 1 2 6.50 13 10 2 0 0 1 0
............................................................................................TATCTCAGCCATTTTGACGAGTT................................................... 23 1 2 6.50 13 7 1 3 2 0 0
............................................................................................TATCACAGCCATTTTGACGCGTTT.................................................. 24 1 2 6.50 13 9 0 3 1 0 0
............................................................................................TATCACAGCCATTTTGACGAA..................................................... 21 1 2 6.50 13 6 5 1 1 0 0
............................................................................................TATCACAGCCATTTTTACGAGC.................................................... 22 2 2 6.00 12 8 0 4 0 0 0
......................................................GCGTCAAAATGACTGTGAGCTATT........................................................................................ 24 1 1 6.00 6 1 3 1 0 1 0
............................................................................................TATCACAGCCATTTAGACGAGT.................................................... 22 1 2 6.00 12 7 0 5 0 0 0
............................................................................................TATCACAGCCATTTTGACGCTTT................................................... 23 2 2 6.00 12 11 0 1 0 0 0
.................................................................................................CAGCCATTTTGACGAGTT................................................... 18 0 2 6.00 12 0 9 1 2 0 0
............................................................................................TAGCAGAGCCATTTTGACGAGT.................................................... 22 2 2 6.00 12 12 0 0 0 0 0
............................................................................................TATCACAGCCAGTTTGACGAGGT................................................... 23 2 2 6.00 12 12 0 0 0 0 0
............................................................................................TAGCACAGCCATTTTGACGAGTTT.................................................. 24 1 2 6.00 12 10 0 2 0 0 0
............................................................................................TAGCACAGCCATTTTGACGCGT.................................................... 22 2 2 6.00 12 12 0 0 0 0 0
.............................................................................................ATCACAGCTATTTTGACGAGTT................................................... 22 1 2 6.00 12 0 12 0 0 0 0
............................................................................................TATCACCGCCATTTTGACGCGT.................................................... 22 2 2 6.00 12 10 0 1 1 0 0
.......................................................CGTCAAAATGACTGTGAGCTA.......................................................................................... 21 0 1 6.00 6 0 6 0 0 0 0
............................................................................................TATCACAGCCATGTTGACGTGTT................................................... 23 2 2 6.00 12 9 0 3 0 0 0
............................................................................................TATCACAGGCATTTTGACGA...................................................... 20 1 2 6.00 12 1 11 0 0 0 0
............................................................................................TATCACAGCCACTTTGACGAGC.................................................... 22 2 2 6.00 12 10 0 2 0 0 0
............................................................................................TATCACAGGCATTTTGACGAGG.................................................... 22 2 2 6.00 12 0 12 0 0 0 0
............................................................................................TATCACAGCCAGCTTGAGGAG..................................................... 21 3 10 5.80 58 11 14 19 2 12 0
...........................................................................................ATATCACAGCCATTTTGACGAG..................................................... 22 0 2 5.50 11 1 2 1 7 0 0
............................................................................................TATCACAGCCATTTTAACGTGTT................................................... 23 2 2 5.50 11 10 0 1 0 0 0
............................................................................................TATCACAGCCGTTTTGTCGAGT.................................................... 22 2 2 5.50 11 10 0 1 0 0 0
............................................................................................TATCACAGCCATTTTGACCAGC.................................................... 22 2 2 5.50 11 10 0 1 0 0 0
............................................................................................TATCACAGCCCTTTTGACGAG..................................................... 21 1 2 5.50 11 2 0 0 9 0 0
............................................................................................TAGCACAGCCATTTTCACGAGTT................................................... 23 2 2 5.50 11 10 0 1 0 0 0
...........................................................................................TTATCACAGCCATTTTGACGAGT.................................................... 23 1 2 5.50 11 0 10 1 0 0 0
............................................................................................TATCACAGGCATTTTGACGAGGT................................................... 23 2 2 5.50 11 0 11 0 0 0 0
............................................................................................TATCACAGCCATTTTGCCGAG..................................................... 21 1 2 5.50 11 5 0 5 1 0 0
............................................................................................TATCACAGCCGTTTTGACGTGT.................................................... 22 2 2 5.50 11 8 0 1 2 0 0
................................................................................................ACAGCCATTTTGACGAGC.................................................... 18 1 2 5.50 11 5 0 5 1 0 0
............................................................................................TATCACAGCCATTTTGCCGCGC.................................................... 22 3 2 5.50 11 7 0 4 0 0 0
............................................................................................TAGCACAGCCATTTTGTCGAGTT................................................... 23 2 2 5.50 11 9 0 1 1 0 0
............................................................................................TATCACAGCCAGGTTGACGAGTT................................................... 23 2 2 5.50 11 10 0 1 0 0 0
............................................................................................TATCACAGCCATTTTGCCGCTT.................................................... 22 3 2 5.50 11 9 0 2 0 0 0
............................................................................................TATCACAGCCAGGTTGACGTGT.................................................... 22 3 2 5.50 11 10 0 1 0 0 0
............................................................................................TATCACAGCCAGTTTGACGTGT.................................................... 22 2 2 5.50 11 10 0 1 0 0 0
............................................................................................TATCACAGTCATTTTGACGAGTTT.................................................. 24 1 2 5.50 11 3 8 0 0 0 0
............................................................................................TATCACTGCCATTTTGACGTGTT................................................... 23 2 2 5.50 11 10 0 1 0 0 0
............................................................................................TATCACAGACATTTTGACGAGC.................................................... 22 2 2 5.00 10 7 3 0 0 0 0
............................................................................................TATCACAGCCATTTTGACGAGTTTG................................................. 25 0 2 5.00 10 2 2 0 1 5 0
............................................................................................TATCACAGTCTTTTTGACGAGT.................................................... 22 2 2 5.00 10 7 0 2 1 0 0
............................................................................................TATCACAGCCATTTTGACCAG..................................................... 21 1 2 5.00 10 3 0 3 4 0 0
............................................................................................TATCACAGCCATTTTGACTCGT.................................................... 22 2 2 5.00 10 9 0 0 1 0 0
............................................................................................TAGCACAGCCATTTTTACGAGT.................................................... 22 2 2 5.00 10 10 0 0 0 0 0
............................................................................................TATCACAGACATTTTGACGAGGT................................................... 23 2 2 5.00 10 1 8 0 1 0 0
............................................................................................TATCACAGCCAGTTTGACGAGCT................................................... 23 2 2 5.00 10 9 0 1 0 0 0
............................................................................................TATCACAGCCATTTTGACGACC.................................................... 22 2 2 5.00 10 9 0 1 0 0 0
............................................................................................TATCACAGCCAATTTGACGAGT.................................................... 22 1 2 5.00 10 7 1 1 1 0 0
............................................................................................TAGCACAGCCATTTTGACGAG..................................................... 21 1 2 5.00 10 5 0 4 1 0 0
............................................................................................TATCACAGCCATTTTCACGTGT.................................................... 22 2 2 5.00 10 8 0 2 0 0 0
............................................................................................TATCACAGCCAGTTTGACGTGTT................................................... 23 2 2 5.00 10 10 0 0 0 0 0
............................................................................................TATCACAGCCATTTTGTCGATT.................................................... 22 2 2 5.00 10 9 0 1 0 0 0
......................................................GCGTCAAAATGACTGTGAGCTATGA....................................................................................... 25 1 1 5.00 5 0 5 0 0 0 0
............................................................................................TAACACAGCCATTTTAACGAGTT................................................... 23 2 2 5.00 10 9 0 1 0 0 0
.....................................................CGCGTCAAAATGACTGTGAGC............................................................................................ 21 0 1 5.00 5 5 0 0 0 0 0
............................................................................................TATCACAGCCTTTTTGCCGAGT.................................................... 22 2 2 5.00 10 9 0 1 0 0 0
............................................................................................TATCACAGCCATTATGACGAGTT................................................... 23 1 2 5.00 10 6 1 3 0 0 0
............................................................................................TATCACAGCCATTTAGACGAGTT................................................... 23 1 2 5.00 10 7 1 0 1 1 0
............................................................................................TATCACAGCCATTTTGACGT...................................................... 20 1 2 4.50 9 6 1 0 0 2 0
............................................................................................TAGCACAGCCGTTTTCACGAGT.................................................... 22 3 2 4.50 9 8 0 1 0 0 0
............................................................................................TTTCACAGCCATTTTGACGAGT.................................................... 22 1 2 4.50 9 6 0 1 1 1 0
............................................................................................TAGCACAGCCATTGTGACGAGC.................................................... 22 3 2 4.50 9 8 0 1 0 0 0
............................................................................................TAGCACAGCCATTTTGACGCGTT................................................... 23 2 2 4.50 9 9 0 0 0 0 0
............................................................................................TAGCACAGCCATTGTGACGAGTT................................................... 23 2 2 4.50 9 9 0 0 0 0 0
............................................................................................TATCACAGGCATTTTGACGAGA.................................................... 22 2 2 4.50 9 0 9 0 0 0 0
............................................................................................TATCACAGCCATTTTGACGAGTCT.................................................. 24 1 2 4.50 9 4 1 1 0 3 0
............................................................................................TATCACAGCCAATTTGACGAGTT................................................... 23 1 2 4.50 9 5 2 1 1 0 0
............................................................................................TATCACAGCCATTTTTACGAGCT................................................... 23 2 2 4.50 9 8 0 1 0 0 0
............................................................................................TAGCACAGGCATTTTGACGAGTT................................................... 23 2 2 4.50 9 9 0 0 0 0 0
.............................................................................................ATCACAGCTATTTTGACGAGT.................................................... 21 1 2 4.50 9 0 9 0 0 0 0
............................................................................................TATCACAGCCATTTTCACGTGTT................................................... 23 2 2 4.50 9 7 0 2 0 0 0
............................................................................................TATCACAGCCATTTTTACGCGTT................................................... 23 2 2 4.50 9 7 0 2 0 0 0
............................................................................................TATCACAGCCAGTTTGACGAGC.................................................... 22 2 2 4.50 9 7 0 2 0 0 0
............................................................................................TATCACAGCCAGTTTGACGCGT.................................................... 22 2 2 4.50 9 8 0 1 0 0 0
............................................................................................TATCACAGCCAGTTTGGCGAGG.................................................... 22 3 2 4.50 9 7 0 2 0 0 0
............................................................................................TAACACAGCCATTTTGACGTGT.................................................... 22 2 2 4.50 9 9 0 0 0 0 0

Anti-sense strand reads

GGAGGTGGGTTGGTACGACGAGAGTAAGACGACGATGACGACGACGTGTAAATGCGCAGTTTTACTGACACTCGATACACAAAAACTAGAGTATAGTGTCGGTAAAACTGCTCAAACTACACGTCAGGGTGAGGTAGTTACCGTCTCACCTCGAAAAGGTCACAAC

*************************************..((((((((((.((.((((((((((.((((((..((((............)))))))))).)))))))))).))..))))))))))...*************************************** 		Read size # Mismatch Hit Count Total Norm Total V057

head

 V042

embryo

 V050

head

 M042

female body

 M021

embryo
....................................................TGCGCAGTTTTACTGACACTAT............................................................................................ 22 2 3 2.33 7 6 1 0 0 0
....................................................TGCGCAGTTTTACCGACA................................................................................................ 18 1 3 2.00 6 4 1 1 0 0
....................................................TGCGCAGTTTTACCGACACTCT............................................................................................ 22 2 3 1.67 5 5 0 0 0 0
...GGTGGGTTGGTACGACCATAGT............................................................................................................................................. 22 2 1 1.00 1 1 0 0 0 0
....................................................TGAGCAGTTTTACTGCCACTCG............................................................................................ 22 2 1 1.00 1 0 1 0 0 0
....................................................TGCGCAGTTCTACTGACACTAC............................................................................................ 22 3 1 1.00 1 1 0 0 0 0
...................................................TTGCGCAGTTTTGCTGACACTAG............................................................................................ 23 3 1 1.00 1 0 1 0 0 0
....................................................TGCGCAGTTTTACTGCCACTAC............................................................................................ 22 3 1 1.00 1 1 0 0 0 0
.....................................................GCGCAGTTTTACTGACACTCGAT.......................................................................................... 23 0 1 1.00 1 1 0 0 0 0
...................................................TTGCGCAGTGTTACCGACACTCG............................................................................................ 23 3 1 1.00 1 1 0 0 0 0
..........................................................................................GTATAGTGTCGGTAAAACTGCT...................................................... 22 0 2 0.50 1 0 0 0 1 0
....................................................TGAGCAGTTTTCCTGACACTCT............................................................................................ 22 3 3 0.33 1 0 1 0 0 0
...................................................TTGCGCAGTTTTACGGACA................................................................................................ 19 2 3 0.33 1 1 0 0 0 0
....................................................TGCGCAGTTTTACTGCCACTAT............................................................................................ 22 3 3 0.33 1 1 0 0 0 0
....................................................TGAGCAGTATTACTGACACTCT............................................................................................ 22 3 3 0.33 1 0 1 0 0 0
....................................................TGCGCAGTTTTACTGGCACTAT............................................................................................ 22 3 3 0.33 1 1 0 0 0 0
....................................................TGCGCAGTTTTGCCGACACTAG............................................................................................ 22 3 3 0.33 1 1 0 0 0 0
.................................................AAATGAGCAGTTTTACCGACACTA............................................................................................. 24 3 3 0.33 1 0 0 0 1 0
.....................................................GCGCAGTTTTACTGACACTAT............................................................................................ 21 2 3 0.33 1 1 0 0 0 0
....................................................TGCGCAGTTTTACCGACACTAG............................................................................................ 22 2 3 0.33 1 1 0 0 0 0
....................................................TGCGCAGTTTTACCAACACTCT............................................................................................ 22 3 3 0.33 1 0 0 1 0 0
....................................................TGCGCAGTTTTACCGAGACTCT............................................................................................ 22 3 3 0.33 1 1 0 0 0 0
....................................................TGCGCAGTTTTTCCGACACTAG............................................................................................ 22 3 3 0.33 1 1 0 0 0 0
...................................................TTGTGCAGTTTTACCGACACTCG............................................................................................ 23 3 3 0.33 1 1 0 0 0 0
....................................................TGAGCAGTTTGACTGACACTAG............................................................................................ 22 3 3 0.33 1 1 0 0 0 0
....................................................TGCGCAGTTTTACTGACAGTAT............................................................................................ 22 3 3 0.33 1 1 0 0 0 0
....................................................TGGGCAGTTTTACTGACACTGT............................................................................................ 22 3 4 0.25 1 1 0 0 0 0
....................................................GGCGCAGTTTTACTGACACTAT............................................................................................ 22 3 4 0.25 1 1 0 0 0 0
.....................................................GCGCAGTTTTACTGCCACTAT............................................................................................ 21 3 4 0.25 1 1 0 0 0 0
..GGGTGGATTGGTACGACGAT................................................................................................................................................ 20 3 4 0.25 1 1 0 0 0 0
....................................................TGCGCAGTTTTCCTGACACTAT............................................................................................ 22 3 4 0.25 1 1 0 0 0 0
....................................................TGCGCAGTTTTACCGACCCTCT............................................................................................ 22 3 4 0.25 1 1 0 0 0 0
.CAGGTGGGTTTGTACGAC................................................................................................................................................... 18 2 4 0.25 1 1 0 0 0 0
....................................................TGCGCCGTTTTACCGACACTCT............................................................................................ 22 3 4 0.25 1 1 0 0 0 0
....................................................TGCGCCGTTTTACTGACACTAT............................................................................................ 22 3 5 0.20 1 1 0 0 0 0
....................................................TCCGCAGTTTTACTGACC................................................................................................ 18 2 5 0.20 1 0 0 1 0 0
....................................................TGCGCAGTTTTACGGACACTTT............................................................................................ 22 3 7 0.14 1 1 0 0 0 0
.GGGGTGGGTTTGTACGAC................................................................................................................................................... 18 2 9 0.11 1 0 0 0 0 1
...GGTGGGTTTGTACGACGG................................................................................................................................................. 18 2 12 0.08 1 1 0 0 0 0
..GGGTGGGTTGGTACGACCG................................................................................................................................................. 19 3 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droPer2 scaffold_13:1553221-1553386 + dpe-mir-13b-2 Known_mirbase CCTCC----------------ACC-------------------CAA----CCATGC----------------------------------------TGCTCTCAT-T-CTGC------TG-----------CTA---CTG-CTGCTGCACATTTACGCGTCAAAATGACTGTGAGCTATGT-GTTT----TTGAT-CTCATATCACAGCCATTTTGACGAGTTTGATG-TGCAGTCCCACTCC----ATCA---ATG-G---CAGA-GTG---GAGCTTTTCCAGTG----T-TG
dp5 XL_group1e:7000752-7000917 - dps-mir-13b-2 Known_mirbase CCTCC----------------ACC-------------------CAA----CCATGC----------------------------------------TGCTCTCAT-T-CTGC------TG-----------CTA---CTG-CTGCTGCACATTTACGCGTCAAAATGACTGTGAGCTATGT-GTTT----TTGAT-CTCATATCACAGCCATTTTGACGAGTTTGATG-TGCAGTCCCACTCC----ATCA---ATG-G---CAGA-GTG---GAGCTTTTCCAGTG----T-TG
droWil2 scf2_1100000004590:2053039-2053189 + dwi-mir-13b-2 Known_mirbase CCCCA----------------AT---------------GTACCTAC----CCCTGC----------------------------------------A---------A-CTGC------TG--------TGCTTA---CAA-CTGATGTCCATGGTCGCGTCAAAATGACTGTGAGCTATGT-TAACCGGTCAGAAATTCATATCACAGCCATTTTGACGAGTTCGATG-GGCATACG-----A-ATCTTCA------TA---AAAA--TA---A-------------------TG
droVir3 scaffold_12970:9304260-9304424 + dvi-mir-13b-2 Known_mirbase CACTT---ACAATCATATTA--C-----------------------TCA----TA-CACTTCATAAATATGCGAATGTGTGC--------GTG--TC----T----CT-CGC------TG-----------CTG---CCA-ATGCTCCATATTGGCGCGTCAAAATGACTGTGAGCTATGT-TGTTGCATTTGCCATTCATATCACAGCCATTTTGACGAGTTTGATGTGGCAGCCA-----C-A--------------------------------------------------
droMoj3 scaffold_6473:13342560-13342695 - dmo-mir-13b-2 Known_mirbase CCTCT----------------AT-----------------------------------------AAATATTTGATAGTGTGTGTATGTATGTG--TT----T----CA-CGC------T-----------TCCT---CTA-ATGCTCCATATTTGCGCGTCAAATTGACTGTGAGCTATGT-TTAT----GAGATTATCATATCACAGCCATTTTGACGAGTTTGATG-TG----------------------------------------------------------------
droGri2 scaffold_15203:306957-307128 + dgr-mir-13b-2 Known_mirbase CCTAC-------------C--ACC-------------------TAA----TCAT----------AAATATGTGAGTGTGTTC--------T----------TCATGGT-CGT------TG-----------CTA---TCA-GTGCTCCATATTGGCGCGTCAAATTGACTGTGAGCTATGT-TGTTGCAGTTGTAATTCATATCACAGCCATTTTGACGAGTTTGATGTGGCAGCCACAATCTACTCATTG---A---CC--AAAA--T------------------------TA
droAna3 scaffold_13047:797432-797565 + dan-mir-13b-2 Known_mirbase TATTT----------------TCTTGGTCAAGTTTTAAGTGCCTT-------------------------------------------------GT----------CC-CGCTTCTGCT--------------T---CAT-TACCTGTTTCCCAGCGCGTCGAAATGACTGTGACTTATGC-GTAT----TTGAT-GTCATATCACAGCCATTTTGACGAGTTTGGTG-GACAGT------------------------------------------------------------
droBip1 scf7180000396431:582334-582482 + TTTCC----------------TT--GGTGAAGTTTATAGCACCCG-------------------------------------------------GTT---------C--CT--------------CTTCTGCTA---ATC-TTGCTGTTTCCCAACGCGTCGAAATGACTGTGACTTATGC-GTAT----TTGAT-GCCATATCACAGCCATTTTGACGAGTTTGGTG-GACAGTCATAA-----CCATCG---ACA-------GA----------------------------G
droKik1 scf7180000301542:45323-45496 + GCTCC----------------AGT-------------------TAA----TG-----------------------------------CCTATT--CTCCTCTCCT-C-CACC------TG------------TG----CT-TTGCTGTCTATCAACGCGTCAAAATGACTGTGAGCTATGTTGAAT----TTGAC-TTCATATCACAGCCATTTTGACGAGTTTGATG-GACAGACT-----C-ATCATCA---ATAAATGGAACA-GGGATATAGATCGTCCTGTG----TGTG
droFic1 scf7180000453829:954174-954298 + CCTTC----------------GTT-----------------------------------------------------------------------------TCGT-T-CG---------GTTAACAGTGATCCA---TCATCTGCTGTCTTTCAAAGCGTCAAGATGACTGTGAGCTATGT-GGAT----TTGAC-TTCATATCACAGCCATTTTGACGAGTTTGGCG-GACAGCCT-----C-A--------------------------------------------------
droEle1 scf7180000491006:2500488-2500631 + GTTAC----------------ACA-------------------TTA----TAA----------------------------------------GATTCCTTCTCT-T-ATGC------C-----------TCTG---CTA-CTGCTGTCTATTAACGCGTCAAAATGACTGTGAACTATGT-GGAT----TTGAC-TTCATATCACAGCCATTTTGACGAGTTTGGTG-GGCAGGCA-----C-ATCATCG---ATGTC----CGA-----------------------------
droRho1 scf7180000779841:510692-510820 + CG-------------GGCTACAGT-------------------TAT----AGATTT--------------TA---------------------GA-----TT-----------------------CATCCTTCA---GCT-TTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGT-GGAT----TTGAC-TTCATATCACAGCCATTTTGACGAGTTTGTTG-GGCAGGCA-----C-A--------------------------------------------------
droBia1 scf7180000301760:4584578-4584701 + TCTTC----------------AC---------------------------------------------------------------------------------------------------------CCCGTA---CTT-CTGCTGTCTATCAGCGCGTCAAAATGACTGTGAGCTATGT-GCAT----TTAAC-CTCATATCACAGCCATTTTGACGAGTTTGTTG-GGCATGCG-----C-ATCATCA---TCGGG---GAGC---------------------------TT
droTak1 scf7180000415169:933643-933779 - GTTTA-----TAT--------AGT-------------------TT--------------------------------------------------------------------------------------ATA----CC-CTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGT-GGAT----TTGAC-TTCATATCACAGCCATTTTGACGAGTTTGTTG-GCCAGTCGCAT-----TCGTCGTTAAAG-G---AAAA-GT-----------TCCAGTG----T---
droEug1 scf7180000409631:397629-397781 + TCGTGA-TTCGATCGTGATA--T-----------------------A---------CCCTACA------------------------------GA-----AT-----------------------GATCCCTTA---CCT-TTGCTGTCTATTAACGCGTTAAAATGACTGTGAGCTATGT-TGAT----TTGAC-TTCATATCACAGCCATTTTGACGAGTTTGTTG-GGCAGGCA-----C-ATCATCG------GG---AA-T-TTG---AAGT------------------
dm3 chrX:8985221-8985366 + dme-mir-13b-2 Known_mirbase TTTCCAGTTCCATCGTGCTA--A-----------------------A------------------------------------------------------------------------------CATCGTCTA---CCT-CTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGT-GGAT----TTGAC-TTCATATCACAGCCATTTTGACGAGTTTGTTG-GACAGCCAGCC-TC----ATCA---ACGTG---GAAATGT------------------------TG
droSim2 x:8531884-8532032 + dsi-mir-13b-2 Known_mirbase TTTCCAGTTCCATCGTGCTA--C-----------------------C------------------------------------------------------------------------------CATCGTCTG---CCT-CTGCTGTCTATCAACGCGTCAAAATGACTGTGAGCTATGT-GGAT----TTGAC-TTCATATCACAGCCATTTTGACGAGTTTGTTG-GGCAGCCAGCC-TC----ATCA---ACGTG---AAAA-GTC---GTGC-----------------G
droSec2 scaffold_34:345576-345724 + dse-mir-13b-2 Known_mirbase TTTCCAGTTCCATCGTGCTA--C-----------------------C------------------------------------------------------------------------------CATCCCCTG---CCT-CTGCTGTCTATCAACGCGTCAAAATGACTGTGAGCTATGT-GGAT----TTGAC-TTCATATCACAGCCATTTTGACGAGTTTGTTG-GGCAGCCAGCC-TC----ATCA---ACGTG---AAAA-GTC---GTGC-----------------G
droYak3 X:12330519-12330681 - dya-mir-13b-2 Known_mirbase TCTTC---------GTGCTA--C-----------------------TCAGTTATG--------------------------------------GACT----------------------------CGTCGCTTA---CCC-CTGCTGTCTAGTAACGCGTCAAAATGACTGTGAGCTATGT-GGAT----TTGAC-TTCATATCACAGCCATTTTGACGAGTTTGCTG-GCCAGTCT-----C-ATCATCG------TG---AAAA-GTC---GGCC-GTTCAAGTGCATTT-TT
droEre2 scaffold_4690:6132279-6132424 - der-mir-13b-2 Known_mirbase TTTG--------TCGTGCTA--C-----------------------GCAGTGAT----------A----------------------------GATT----------------------------CGTCGTTTAAACCCC-CTGCTGTCTATTAGCGCGTCAAAGTGACTGTGAACTATGT-GGAT----TTGAC-TTCATATCACAGCCATTTTGACGAGTTTGTTG-GGCAGCCC-----C-ATCATCG------TG---AAGT-GT--------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
CCTCC----------------ACC-------------------CAA----CCATGC----------------------------------------TGCTCTCAT-T-CTGC------TG-----------CTA---CTG-CTGCTGCACATTTACGCGTCAAAATGACTGTGAGCTATGT-GTTT----TTGAT-CTCATATCACAGCCATTTTGACGAGTTTGATG-TGCAGTCCCACTCC----ATCA---ATG-G---CAGA-GTG---GAGCTTTTCCAGTG----T-TGSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGT.........................................................................22242942.508588535913731961523317348673996
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTT........................................................................23229027.00580541662227738399275191003397
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAG..........................................................................2122419.0048381101838956920902112
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT.......................................................................2421174.502349061877297986371
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA.......................................................................2421117.502235815763137720556
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTT........................................................................222883.501767016563345420
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGT.........................................................................212539.00107801016120347
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTATG...................................................................................................................241499.00499230612216395
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA......................................................................252447.0089447061416289
............................................................................................................................................................................................................ACAGCCATTTTGACGAGT.........................................................................182380.50761151112404022
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGC.........................................................................222287.00574618131643685
........................................................................................................................................................................................................TATCACAGCCATTTTGACGA...........................................................................202277.5055516244128748310
............................................................................................................................................................................................................ACAGCCATTTTGACGAGTT........................................................................192168.5033711538921874
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGA.........................................................................222135.5027111001873781
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTAT....................................................................................................................231103.0010306256921
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGG.........................................................................22299.00198243616201011
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTA........................................................................23283.001660692524453
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG.......................................................................24271.501431382289110
........................................................................................................................................................................................................TATCACAGCCATTTTGACG............................................................................19266.501331277914210
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTC.......................................................................24265.001301262182657
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAG..........................................................................20261.5012301230000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA.......................................................................23251.5010301012000
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGTT........................................................................21249.50990860625
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTA.....................................................................................................................22146.00460330157
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTC........................................................................23239.007816411506
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAA.......................................................................24234.0068039133112
............................................................................................................................................................GCGTCAAAATGACTGTGAGCT......................................................................................................................21134.003411900104
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGT.........................................................................20232.00640416881
.............................................................................................................................................................CGTCAAAATGACTGTGAGCTATG...................................................................................................................23131.00310310000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAA......................................................................24229.00580580000
........................................................................................................................................................................................................TATCACAGCCATTTTGAC.............................................................................18227.50553991060
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTT.......................................................................23226.50530480014
............................................................................................................................................................GCGTCAAAATGACTGTGAGC.......................................................................................................................20117.00170100115
...........................................................................................................................................................................................................CACAGCCATTTTGACGAGT.........................................................................19215.50310145435
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTATGT-.................................................................................................................25113.0013090004
.......................................................................................................................................................................................................ATATCACAGCCATTTTGACGAGT.........................................................................23212.00240122442
.........................................................................................................................................................TACGCGTCAAAATGACTGTG..........................................................................................................................20112.0012520230
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTT......................................................................25211.5023080366
...........................................................................................................................................................................................................CACAGCCATTTTGACGAGTT........................................................................20210.0020093305
.......................................................................................................................................................................................................ATATCACAGCCATTTTGACGAGTT........................................................................2429.00180170010
............................................................................................................................................................................................................ACAGCCATTTTGACGAGTTT.......................................................................2029.00180105120
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAAA......................................................................2529.00180161010
........................................................................................................................................................................................................TATCACAGCCATTTTGACGATC.........................................................................2227.50150102120
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGA...........................................................................1927.00140140000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTG........................................................................2326.50130200101
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAA..........................................................................2126.5013051160
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTATT...................................................................................................................2416.006030111
.............................................................................................................................................................................................................CAGCCATTTTGACGAGTT........................................................................1826.0012092100
.............................................................................................................................................................CGTCAAAATGACTGTGAGCTA.....................................................................................................................2116.006060000
.......................................................................................................................................................................................................ATATCACAGCCATTTTGACGAG..........................................................................2225.5011027110
............................................................................................................................................................................................................ACAGCCATTTTGACGAGC.........................................................................1825.5011001550
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTG......................................................................2525.0010021025
........................................................................................................................................................................................................TATCACAGCCATTTTGACGACC.........................................................................2225.0010000190
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTATGA-.................................................................................................................2515.005050000
...........................................................................................................................................................CGCGTCAAAATGACTGTGAGC.......................................................................................................................2115.005000050
........................................................................................................................................................................................................TATCACAGCCATTTTGACGT...........................................................................2024.509010062
dp5
CCTCC----------------ACC-------------------CAA----CCATGC----------------------------------------TGCTCTCAT-T-CTGC------TG-----------CTA---CTG-CTGCTGCACATTTACGCGTCAAAATGACTGTGAGCTATGT-GTTT----TTGAT-CTCATATCACAGCCATTTTGACGAGTTTGATG-TGCAGTCCCACTCC----ATCA---ATG-G---CAGA-GTG---GAGCTTTTCCAGTG----T-TGSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTT........................................................................232149495.502989913213012110013328458148601072212862924346533
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGT.........................................................................222126180.5025236125683737078231883434322280614052392155461
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAG..........................................................................21211810.50236211297573493558331149334458217923
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGC.........................................................................2227491.00149820901095936966613931010
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTT........................................................................2226067.0012134010910625464563339331
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTC........................................................................2325169.501033915088251401222118010
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT.......................................................................2424561.00912204679984741231440194333683
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTATG...................................................................................................................2414538.00453804217833037239928813
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA.......................................................................2424504.00900804170348814376389217120153
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGT.........................................................................2123088.00617605333305466312020100
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA......................................................................2521359.50271901857530622514572640
........................................................................................................................................................................................................TATCACAGCCATTTTGACGA...........................................................................2021005.00201021202148309191833417186
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGA.........................................................................222488.009760392222136114611117203
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTAT....................................................................................................................231481.0048104161238438000
.............................................................................................................................................................CGTCAAAATGACTGTGAGCTATG...................................................................................................................231435.00435043500000000
............................................................................................................................................................................................................ACAGCCATTTTGACGAGT.........................................................................182429.00858056163347321564001
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAG..........................................................................202407.5081507441355300000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTA........................................................................232396.007920330259714938291240
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGTT........................................................................212354.00708052972791574002
........................................................................................................................................................................................................TATCACAGCCATTTTGACG............................................................................192335.5067194952775222101480
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTA.....................................................................................................................221311.0031102781111114230
............................................................................................................................................................GCGTCAAAATGACTGTGAGCT......................................................................................................................211288.0028812481113128310
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTC.......................................................................242276.0055201111551311026803360
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAC..........................................................................212270.0054002324212200000
............................................................................................................................................................................................................ACAGCCATTTTGACGAGTT........................................................................192249.504990147142113211662520
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTT.......................................................................232210.5042103881413204000
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGT.........................................................................202207.00414025942752942030
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG.......................................................................242200.5040112865584254000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA.......................................................................232192.503850352243100500
............................................................................................................................................................GCGTCAAAATGACTGTGAGC.......................................................................................................................201190.00190017825003011
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGG.........................................................................222173.503470524622183386000
...........................................................................................................................................................................................................CACAGCCATTTTGACGAGTT........................................................................202142.00284017635455716000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAA.......................................................................242104.50209010948425215600
.............................................................................................................................................................................................................CAGCCATTTTGACGAGTT........................................................................18285.5017101352013300000
.......................................................................................................................................................................................................ATATCACAGCCATTTTGACGAGTT........................................................................24281.501630136551001510
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAA......................................................................24273.50147013950000300
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTG........................................................................23270.501410158829630000
...........................................................................................................................................................................................................CACAGCCATTTTGACGAGT.........................................................................19268.001361811726416000
.......................................................................................................................................................................................................ATATCACAGCCATTTTGACGAGT.........................................................................23259.501190771515830100
.......................................................................................................................................................................................................ATATCACAGCCATTTTGACGAG..........................................................................22257.5011503730123130110
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTT......................................................................25252.00104060740319830
........................................................................................................................................................................................................TATCACAGCCATTTTGACGATC.........................................................................22251.50103008319010000
.............................................................................................................................................................CGTCAAAATGACTGTGAGCTAT....................................................................................................................22149.004904900000000
........................................................................................................................................................................................................TATCACAGCCATTTTGAC.............................................................................18246.00921372325200400
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTC........................................................................22245.0090036423000000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGC.........................................................................21244.5089063647000000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGA...........................................................................19244.508908900000000
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTATGT-.................................................................................................................25142.004203800004000
..............................................................................................................................................................GTCAAAATGACTGTGAGCTATG...................................................................................................................22134.003403110002000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAA..........................................................................21234.00680301212463010
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTATGA-.................................................................................................................25133.003302530000302
.............................................................................................................................................................CGTCAAAATGACTGTGAGCTA.....................................................................................................................21130.003003000000000
.............................................................................................................................................................CGTCAAAATGACTGTGAGC.......................................................................................................................19128.002802800000000
...........................................................................................................................................................CGCGTCAAAATGACTGTGAGCTATG...................................................................................................................25127.002702500000101
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGAC........................................................................23226.005200455110000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAAA......................................................................25224.504903780202000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTG......................................................................25223.004602910932200
.............................................................................................................................................................CGTCAAAATGACTGTGAGCT......................................................................................................................20121.002102100000000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGT...........................................................................20220.004008341420000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGCC........................................................................23218.503700343000000
............................................................................................................................................................GCGTCAAAATGACTGTGAG........................................................................................................................19118.001801800000000
...........................................................................................................................................................CGCGTCAAAATGACTGTGAGC.......................................................................................................................21117.001701201001030
.........................................................................................................................................................TACGCGTCAAAATGACTGTG..........................................................................................................................20117.00170800042120
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAG..........................................................................19216.503302704200000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACG............................................................................18216.503303300000000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGA.........................................................................21216.503302913000000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTA......................................................................25216.003202000504120
.................................................................................................................................................................AAAATGACTGTGAGCTATG...................................................................................................................19115.00150700000602
.........................................................................................................................................................TACGCGTCAAAATGACTGTGA.........................................................................................................................21114.00140200011244
............................................................................................................................................................................................................ACAGCCATTTTGACGAGTTT.......................................................................20214.002803005811010
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAT..........................................................................21213.002603911300000
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTT.....................................................................................................................22112.001201200000000
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTATT...................................................................................................................24112.001201000002000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAAA.........................................................................22211.502301551200000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCC......................................................................25311.3334010602150100
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTA........................................................................22211.002202200000000
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGTTT.......................................................................22210.502101801002000
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGTTA.......................................................................22210.502101830000000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTG.......................................................................23210.502102100000000
...........................................................................................................................................................................................................CACAGCCATTTTGACGAG..........................................................................18210.502101703000010
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAAC.........................................................................22210.502100156000000
droWil2
CCCCA----------------AT---------------GTACCTAC----CCCTGC----------------------------------------A---------A-CTGC------TG--------TGCTTA---CAA-CTGATGTCCATGGTCGCGTCAAAATGACTGTGAGCTATGT-TAACCGGTCAGAAATTCATATCACAGCCATTTTGACGAGTTCGATG-GGCATACG-----A-ATCTTCA------TA---AAAA--TA---A-------------------TGSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGT.........................................................................222408096.008161925764262547777368409407988
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTT........................................................................23280887.001617749623689241519435925410
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAG..........................................................................21224240.004848033454889247919030809
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA.......................................................................2424281.5085632158931685190
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA......................................................................2522590.00518028056435710
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTT........................................................................2221703.003406230159277103
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTATG...................................................................................................................2411431.0014312100912222375
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTC.......................................................................2411373.0013732366282160446
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGT.........................................................................2121350.502701519596185546
........................................................................................................................................................................................................TATCACAGCCATTTTGACGA...........................................................................2021308.502617144296203281829
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGC.........................................................................2221163.00232619436245341538
............................................................................................................................................................................................................ACAGCCATTTTGACGAGT.........................................................................182672.50134524294568720
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGA.........................................................................222617.50123524656284856
........................................................................................................................................................................................................TATCACAGCCATTTTGACG............................................................................192601.501203492151121538
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGG.........................................................................222463.00926353340224315
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCC......................................................................251338.00338410785214
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGT.........................................................................202280.5056101103159289
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTA........................................................................232259.50519376335186
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG.......................................................................242245.504915969226794
.......................................................................................................................................................................................................ATATCACAGCCATTTTGACGAG..........................................................................222176.5035319190152163
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAA.......................................................................242173.0034606312748
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAG..........................................................................202169.5033903110325
...........................................................................................................................................................................................................CACAGCCATTTTGACGAGT.........................................................................192128.50257030330194
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTAT....................................................................................................................231125.0012526022338
.............................................................................................................................................................CGTCAAAATGACTGTGAGCTATG...................................................................................................................231124.001240123010
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA.......................................................................232101.5020301710320
............................................................................................................................................................................................................ACAGCCATTTTGACGAGTT........................................................................192101.50203937712228
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGTT........................................................................212100.50201014443815
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCCC.....................................................................26195.00950261068
....................................................................................................................................................................................T-TAACCGGTCAGAAATTCA...............................................................................................19194.0094381775
............................................................................................................................................................GCGTCAAAATGACTGTGAGCT......................................................................................................................21188.00883837571
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTC........................................................................23285.00170310910246
....................................................................................................................................................................................T-TAACCGGTCAGAAATTC................................................................................................18177.0077760010
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAC..........................................................................21271.5014311801519
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTC.......................................................................23163.0063062001
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCA......................................................................25161.006101012525
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAA..........................................................................21253.50107791981
.......................................................................................................................................................................................................ATATCACAGCCATTTTGACGAGT.........................................................................23249.009813503329
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAAA......................................................................25247.00940250690
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCT......................................................................25142.00420211218
...........................................................................................................................................................................................................CACAGCCATTTTGACGAGTT........................................................................20241.0082064279
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAA......................................................................24239.50790690100
.............................................................................................................................................................................................................CAGCCATTTTGACGAGTT........................................................................18237.5075065154
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTA.....................................................................................................................22136.0036320454
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCG......................................................................25131.0031065119
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAT......................................................................25229.5059090473
........................................................................................................................................................................................................TATCACAGCCATTTTGAC.............................................................................18225.50511926051
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAT..........................................................................21225.00501112423
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTATGT-.................................................................................................................25122.0022018211
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAG..........................................................................19219.50390180417
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCCCC....................................................................27119.0019110008
.......................................................................................................................................................................................................ATATCACAGCCATTTTGACGAGTT........................................................................24218.5037034030
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTG........................................................................23218.50373110149
.......................................................................................................................................................................................................ATATCACAGCCATTTTGACGA...........................................................................21215.0030530715
.......................................................................................................................................................................................................ATATCACAGCCATTTTGACG............................................................................20214.5029810020
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTCC......................................................................24114.0014013001
........................................................................................................................................................................................................TATCACAGCCATTTTGACGG...........................................................................20212.5025220003
..............................................................................................................................................................GTCAAAATGACTGTGAGCTATG...................................................................................................................22111.001109110
...........................................................................................................................................................................................................CACAGCCATTTTGACGAG..........................................................................18211.0022080014
............................................................................................................................................................GCGTCAAAATGACTGTGAGC.......................................................................................................................20110.001008101
........................................................................................................................................................................................................TATCACAGCCATTTTGACGT...........................................................................2029.5019001315
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGA...........................................................................1928.5017016001
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAC......................................................................2538.3325000241
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAAA.........................................................................2227.501501068
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAAT.....................................................................2627.5015000150
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGTTA.......................................................................2227.5015012030
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTCCC.....................................................................2517.00707000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGA.........................................................................2126.5013012001
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAAC.....................................................................2626.0012000120
....................................................................................................................................................................................T-TAACCGGTCAGAAATTCAA..............................................................................................2016.00600150
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCCT.....................................................................2616.00601005
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTATT...................................................................................................................2415.00505000
.............................................................................................................................................................CGTCAAAATGACTGTGAGCTAT....................................................................................................................2215.00505000
............................................................................................................................................................................................................ACAGCCATTTTGACGAGTTA.......................................................................2025.001002080
droVir3
CACTT---ACAATCATATTA--C-----------------------TCA----TA-CACTTCATAAATATGCGAATGTGTGC--------GTG--TC----T----CT-CGC------TG-----------CTG---CCA-ATGCTCCATATTGGCGCGTCAAAATGACTGTGAGCTATGT-TGTTGCATTTGCCATTCATATCACAGCCATTTTGACGAGTTTGATGTGGCAGCCA-----C-A--------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTT........................................................................232299615.505992315718862186140142844551841341938920527359451368059511066860412035598554653549933552438313491072273221530385574006921356191257283238856595936353701007749716473218701524525693942367259691271362472861962662191311102008325049133941361144811637168631029882837377235742712241242943652887164202367536
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGT.........................................................................222282002.00564004171646631651300511321444667271778186823709377544220545111817783634799164800043157965804611215212641572111665212622234917118193067646248777325804312671147841446299961575112702173134272249392762689514190107684939843841347933231215868759698649396237962643312131442353200733102667253962166413211784
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA.......................................................................24241828.508365716184854023371209885649268952749616810541125901005109921240253857319358636405109380833313486472423409312950697560504536504111089910871511182313122300229433146200111663168720520115520613087110155192182383370101
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA......................................................................25241189.50823791099817577334419135010927695531915371113598341866340724405617447116512054212885877527915929132167397374940617138353596453730019347205821576100341736629910890508770702788276164183
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAG..........................................................................21229809.505961913142611846109216713987544201308123201001371012780372865586338284590908375124586718301544285528981294412062324081792382742430241841116137613112515253412281977341095511482628521671616061491158371879257049867266314583694449111192
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT.......................................................................24227781.50555631332364161833560887361426873462492491153649268868565542130860812272888173413032704243721062199875308511601659783250713611154359220674310033053712525331115398969250925850129972626098887533126744812143431
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTC.......................................................................24221978.5043957113136734493813784622138425282815515121771192085185124232123430137449543350143865194570266639541513825559665476113011112035422104107111776449109190767393831326475134727
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTATG...................................................................................................................2415394.00539420238911815180176955211722161510226965564122516221514016125462135105991510151487300010010100110100015487262736278791813188321283147
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGT.........................................................................2123170.5063410058851174620000081118831492227514102021142072411113109122200000000001000100012203021000001120300010
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTT........................................................................2223146.50629300567412652402010122480893979162920504919381021685158108120000000000010100001211110112420021301300001
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAA.......................................................................2423122.506245011192581173827422313822211265431402531333362161541347820537359319730106641557959130010200010002000042517011571364331227109474414102426
............................................................................................................................................................................................................ACAGCCATTTTGACGAGTT........................................................................1922972.0059440110845841764377383325051188502450414526154541131163126172145766433113352334972343839635800000000000010000004915714417119042121312240020
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTA........................................................................2322085.0041700219369562033103916151820106131152064141068272136141314296150493129111140179221144114175011100120013110000225265604249392920132016516132277816
........................................................................................................................................................................................................TATCACAGCCATTTTGACGA...........................................................................2022065.00413073686036154114210037130893698935510120120371047913410612413969226771963989634362400102214304410132146231675341876495252464743395054371082626
............................................................................................................................................................................................................ACAGCCATTTTGACGAGT.........................................................................1821790.0035800186415068112355135172423555432857373511349793321057170834869361022614112610182391781260000000000000001200148386200577342331240120011
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTC........................................................................2321653.003306252329156173291082020141421481324810247422232320193166762843174677760237000001000110000000326401140132821322004410001
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG.......................................................................2421518.00303641021125388196134413021671117524122087109881481399677281031441689302184143106180110010001220000011292714011516191886786647919718651415
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGC.........................................................................2221320.50264163650165123792222277218482318783927101712131473081012844382800010000000000000003032450012151271211000180100
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAAA......................................................................2521027.50205501808110901132251210000140144904417164783141393108222429100219203000000001000000106000522032261960030519341216
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGA.........................................................................2221006.002012233825190712540101120158191361117192153315748434224622373142842531801202222425414000963398470353711811156115771073913232240
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCA......................................................................252952.501905002733551900001165240112512257182020186759246723386450228325383470000001000000000000180120101742411301050025
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTAT....................................................................................................................231710.0071000114189102441037921733120110022261226252516723104151313621110100000000011000001613021442301512015313181414
........................................................................................................................................................................................................TATCACAGCCATTTTGACG............................................................................192674.001348352133509404200102020187188916201419222524262993711316212758300100100101102110233451331312739362825573353211
............................................................................................................................................................................................................ACAGCCATTTTGACGAGTTA.......................................................................202562.5011250060908820104052511331253412735213848932444135010969511572000000000000000000004010333302200000020022
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAG..........................................................................202530.0010600010415000000000002010001000001110300010000000000000000000000011000001000000000000
............................................................................................................................................................GCGTCAAAATGACTGTGAGCT......................................................................................................................211523.0052322585116109061300158135253823511682061902435129000010120111000000405150021181029252318282520033
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTA......................................................................252470.5094100202231510001121041042463325382256532922937599401408959561100010000000000000018570133431303201001011
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTA.....................................................................................................................221389.00389001198571303310105310002061351131425165191642221270000001000010000002261005075211532320331
............................................................................................................................................................................................................ACAGCCATTTTGACGAGTTAA......................................................................212377.0075400611611503002830100103004518162821100068472116845711300000000000000000000300030910200000030012
............................................................................................................................................................................................................ACAGCCATTTTGACGAGTTT.......................................................................202335.506710080501635050302212104810239911771651211410993457161186769000000000000000000051432211800100002000000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTT......................................................................252329.506590046941462100101277412814141112211212352736442072721427917201100000000000200001002523081700062012100100
............................................................................................................................................................................................................ACAGCCATTTTGACGAGTTC.......................................................................202321.00642003119442000110001101001320221155127201851389000123137000000000000000000001121701100000000000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAT......................................................................252315.006300016315060100010300311140320301733481116635534268940472350100000000000000000545082732101100010001
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGG.........................................................................222269.50539957695624321005106210218177200200118152142109010000000000100100249745502617300797107200012
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGTT........................................................................212255.00510003353251001000004100210131116131820363410232431000000000000000110012400000020210000000
........................................................................................................................................................................................................TATCACAGCCATTTTGAC.............................................................................182249.004983847220000000001710467807822013262115161315125204432772001000100000000230023006645594710116110012
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCC......................................................................253248.337450033116191004000001010293132254657557501360650000121120000000000000000000011300600000000100000
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGT.........................................................................202245.004900130527222000007551113263448361112759302510452000000000000000000048200011000100000000
.............................................................................................................................................................CGTCAAAATGACTGTGAGCTATG...................................................................................................................231244.00244002420000000000000000000000001000000000000000000000000000000000100000000000000000
.............................................................................................................................................................................................................CAGCCATTTTGACGAGTT........................................................................182197.0039400861321152901010005345331030402251611762136111513179000000000000000000012028200000110000000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCT......................................................................252184.003680032851000011000010232218221547292666039030010420010000000000000000001300523100003100000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTT.......................................................................232172.00344002844400000001021010022120254240413211200000000000000000000003010300000002000000
...........................................................................................................................................................................................................CACAGCCATTTTGACGAGTT........................................................................202170.0034000127258470100001221121321244212647111231330230000000000000000000314461500022000000000
...........................................................................................................................................................................................................CACAGCCATTTTGACGAGT.........................................................................192128.502570014716302011002221021001347572450510246231000000000000000000024511100000100000000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA.......................................................................232122.50245001559200000000200001000003231001006051791200000000000010000000000001220000000000101
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTG......................................................................252114.00228001003030010031220111612103611101165161187106611100000000000000000003220100001314712700010
.......................................................................................................................................................................................................ATATCACAGCCATTTTGACGAGTT........................................................................242103.00206001756001000000010000010060010000001000010000000000000000000010006300100000000002
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTCA.......................................................................24296.0019200120102200001010000107009104223621454826141699000000000000000000010202001002102002000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAA......................................................................24291.001820070200300000120000000001651231000132620121020000000000000000000000001411000000010021
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAA..........................................................................21290.0018001254010200000010131210203372352511358551000100100000000001001360037912102000100245
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTG........................................................................23286.5017300331310020000000200001201550404128234461740000000000000001000219401403062302200000
..................................................................................................................................................................AAATGACTGTGAGCTATG...................................................................................................................18186.008601300000101400000001010202111610520100000000000000000000000000000100000034203300000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTC.......................................................................23284.001680011780300000000000000300110111250901010001000000000000000000000130000000000000000
.......................................................................................................................................................................................................ATATCACAGCCATTTTGACGAGT.........................................................................23283.50167001560000000000000000000111000010100000000000000000000000000010004001000000000000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTCC.......................................................................24273.501470011043400001000201001801800211256200170000622000000000000000000000101000000010000000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAAT.....................................................................26270.5014100221010000112000000000275112000217011161911130000000000000000000001003702000000010010
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTATGT-.................................................................................................................25167.006700372112000000001000000121000041200001041000000000000000000000600000000000000000
............................................................................................................................................................GCGTCAAAATGACTGTGAGC.......................................................................................................................20167.006701262000200000021020000000231430300010000000000000000000000004000311002001100010
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTC......................................................................25364.001920040454100010020002113217245537168272120412012000000000000000000000303100000100000000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCCC.....................................................................26361.0018300804620000000000010300050220889390200000523000000000000000000000431000011000001000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGAA........................................................................23254.501090011310100000000100001000402221042010623200000000000000000010010002014200000045373
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTGA......................................................................25254.00108003002400000201120001004504241035051517970010000000000000000002106100000000000000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAAC.....................................................................26252.50105003160100001300000003009330301018031174230000000000000000000010000121000000003120
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAC..........................................................................21252.00104320134000000010012010012012200111200001000000000000000000000008100041601101040000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAAA.........................................................................22247.0094001510000000020000000000030322101001053500000000001000000000013003126700000031355
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAC......................................................................25342.6712800508040000010000000000215264000173115124200000000000000000000030000031100000010000
....................................................................................................................................................................................T-TGTTGCATTTGCCATTCA...............................................................................................19141.004100102000000000020101020011145101100003010000000000000000000000000100000030000000
..............................................................................................................................................................................................................AGCCATTTTGACGAGTTAA......................................................................19236.007200100100000247000000100422420000414157640000000000000000000000000000000000000010
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTCC.....................................................................26335.331060030141000000001101080001000161310250100000010000000000000000000000100000000000000000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGATC.........................................................................22234.0068000100001000000110100323100100003000210000000000000000000000260091910000000000001
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAG..........................................................................19233.506700531000000000010000001101023100100010000000000000000000000000000000000000000100
.................................................................................................................................................................AAAATGACTGTGAGCTATG...................................................................................................................19133.00330080000010500000000000004343000000000002000000000000000000010000000020000000000
droMoj3
CCTCT----------------AT-----------------------------------------AAATATTTGATAGTGTGTGTATGTATGTG--TT----T----CA-CGC------T-----------TCCT---CTA-ATGCTCCATATTTGCGCGTCAAATTGACTGTGAGCTATGT-TTAT----GAGATTATCATATCACAGCCATTTTGACGAGTTTGATG-TG----------------------------------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGT.........................................................................222449045.0089809010692983208435525443956375446208
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTT........................................................................232235172.50470345623531451187281184635786215045
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGC.........................................................................22239283.50785671231591323037778664
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAG..........................................................................21229145.005829019720652211321505283101101
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTT........................................................................22221612.50432258831952597939306491257
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGT.........................................................................21212257.50245151030351563779411291975
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTC........................................................................23210927.002185423237598921234203
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA.......................................................................2426350.5012701185459159849936177
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT.......................................................................2425397.0010794214438461388948551909
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTA........................................................................2321668.0033363131794040270955
........................................................................................................................................................................................................TATCACAGCCATTTTGACGA...........................................................................2021504.0030081423289145162869120
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAG..........................................................................2021321.002642192981332755121
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA......................................................................2521306.00261265725239165041
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAA.......................................................................2421299.00259849514088191631
............................................................................................................................................................................................................ACAGCCATTTTGACGAGT.........................................................................1821297.5025956994044563548620
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGA.........................................................................2221193.5023873961215295166954
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA.......................................................................2321158.00231637510076181117
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTC.......................................................................2421127.00225468518130173555693
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGT.........................................................................2021065.502131495281024156311
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTC........................................................................222945.0018903021218532
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGTT........................................................................212877.50175550775212304
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTT.......................................................................232822.5016454353997142620312
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGC.........................................................................212765.0015301000315161
............................................................................................................................................................GCGTCAAATTGACTGTGAGCTATG...................................................................................................................241648.00648205182631222146
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAC..........................................................................212533.501067121110620
...........................................................................................................................................................................................................CACAGCCATTTTGACGAGT.........................................................................192444.508891249427428
............................................................................................................................................................................................................ACAGCCATTTTGACGAGTT........................................................................192438.00876551231161344435
...........................................................................................................................................................................................................CACAGCCATTTTGACGAGTT........................................................................202429.008581062007473
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGG.........................................................................222391.5078381210767832117
........................................................................................................................................................................................................TATCACAGCCATTTTGACGATC.........................................................................222320.00640014106241
........................................................................................................................................................................................................TATCACAGCCATTTTGACG............................................................................192295.005904131825291041
............................................................................................................................................................GCGTCAAATTGACTGTGAGCT......................................................................................................................211280.002809617915413
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAA......................................................................242274.00548151311235112
............................................................................................................................................................GCGTCAAATTGACTGTGAGCTAT....................................................................................................................231273.00273115610145573
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAAA......................................................................252240.00480326241310125
.............................................................................................................................................................................................................CAGCCATTTTGACGAGTT........................................................................182198.00396480023460
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTG........................................................................232165.003303774102702
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG.......................................................................242164.003281182814301299
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTC.......................................................................232144.50289113418256861
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGC.........................................................................202135.5027110102690
............................................................................................................................................................GCGTCAAATTGACTGTGAGCTA.....................................................................................................................221120.00120430274028
.......................................................................................................................................................................................................ATATCACAGCCATTTTGACGAGT.........................................................................232108.50217146620621
.......................................................................................................................................................................................................ATATCACAGCCATTTTGACGAGTT........................................................................24275.0015079121652
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAG..........................................................................19272.5014587201550
...........................................................................................................................................................................................................CACAGCCATTTTGACGAGC.........................................................................19270.5014100001410
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGA...........................................................................19270.00140114302183
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTA........................................................................22260.0012032201832
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAA..........................................................................21259.5011934475663
............................................................................................................................................................................................................ACAGCCATTTTGACGAGC.........................................................................18259.0011802761030
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTAA.......................................................................23255.5011155300512
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTT......................................................................25253.50107451253618
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAAA.........................................................................22253.0010647400541
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAAC.........................................................................22253.0010600101050
.......................................................................................................................................................................................................ATATCACAGCCATTTTGACGAG..........................................................................22253.00106281411620
............................................................................................................................................................GCGTCAAATTGACTGTGAGCC......................................................................................................................21151.00510000510
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAT..........................................................................21250.50101102146654
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGTC........................................................................21247.50950000950
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGA.........................................................................21246.509354114321
........................................................................................................................................................................................................TATCACAGCCATTTTGAC.............................................................................18242.508527101560
.....................................................................................................................................T---CTA-ATGCTCCATATTTGC...........................................................................................................................................19139.00392510310
............................................................................................................................................................GCGTCAAATTGACTGTGAGC.......................................................................................................................20139.003917100210
droGri2
CCTAC-------------C--ACC-------------------TAA----TCAT----------AAATATGTGAGTGTGTTC--------T----------TCATGGT-CGT------TG-----------CTA---TCA-GTGCTCCATATTGGCGCGTCAAATTGACTGTGAGCTATGT-TGTTGCAGTTGTAATTCATATCACAGCCATTTTGACGAGTTTGATGTGGCAGCCACAATCTACTCATTG---A---CC--AAAA--T------------------------TASizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTT........................................................................23213424.5026849199406909
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGT.........................................................................2224680.50936165102851
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT.......................................................................2421118.50223711491088
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTT........................................................................222891.00178217793
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAG..........................................................................212423.0084679551
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGT.........................................................................212271.505435421
............................................................................................................................................................GCGTCAAATTGACTGTGAGCTATG...................................................................................................................241122.001227745
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA.......................................................................24290.0018010476
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTT.......................................................................23260.001201200
........................................................................................................................................................................................................TATCACAGCCATTTTGACG............................................................................19256.501131130
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGTT........................................................................21241.5083830
........................................................................................................................................................................................................TATCACAGCCATTTTGACGA...........................................................................20239.0078780
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAG..........................................................................20233.5067670
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTC........................................................................23230.0060456
.......................................................................................................................................................................................................ATATCACAGCCATTTTGACGAGTT........................................................................24221.5043430
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTA........................................................................23220.50411427
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTG........................................................................23220.5041635
...........................................................................................................................................................................................................CACAGCCATTTTGACGAGTT........................................................................20217.5035332
............................................................................................................................................................................................................ACAGCCATTTTGACGAGTT........................................................................19216.0032257
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGT.........................................................................20215.5031310
.............................................................................................................................................................CGTCAAATTGACTGTGAGCTATG...................................................................................................................23115.0015150
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG.......................................................................24214.5029263
........................................................................................................................................................................................................TATCACAGCCATTTTGAC.............................................................................18214.5029290
....................................................................................................................................................................................T-TGTTGCAGTTGTAATTCA...............................................................................................19114.0014104
............................................................................................................................................................GCGTCAAATTGACTGTGAGCTAT....................................................................................................................23114.0014122
.......................................................................................................................................................................................................ATATCACAGCCATTTTGACGAGT.........................................................................23212.0024240
.............................................................................................................................................................................................................CAGCCATTTTGACGAGTT........................................................................18211.5023230
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTT......................................................................2529.5019127
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA......................................................................2529.001899
............................................................................................................................................................................................................ACAGCCATTTTGACGAGT.........................................................................1826.001293
.........................................................................................................................................................................................................ATCACAGCCATTTTGACG............................................................................1826.0012120
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGA.........................................................................2226.001293
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTC.......................................................................2426.0012111
...........................................................................................................................................................................................................CACAGCCATTTTGACGAGT.........................................................................1925.0010100
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA.......................................................................2324.50990
.....................................................................................................................................A---TCA-GTGCTCCATATTGGC...........................................................................................................................................1914.00440
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGC.........................................................................2223.50743
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGA...........................................................................1923.50770
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTG......................................................................2523.50770
............................................................................................................................................................GCGTCAAATTGACTGTGAGCTA.....................................................................................................................2213.00321
.............................................................................................................................................................CGTCAAATTGACTGTGAGCTAT....................................................................................................................2213.00330
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGG.........................................................................2223.00660
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGTTT.......................................................................2222.50550
............................................................................................................................................................................................................ACAGCCATTTTGACGAGTTT.......................................................................2022.50532
............................................................................................................................................................GCGTCAAATTGACTGTGAGCT......................................................................................................................2112.00220
.......................................................................................................................................................................................................ATATCACAGCCATTTTGACGAGTTT.......................................................................2521.50330
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTA......................................................................2521.50330
...........................................................................................................................................................................................................CACAGCCATTTTGACGAG..........................................................................1821.00220
...........................................................................................................................................................................................................CACAGCCATTTTGACGAGTTT.......................................................................2121.00220
............................................................................................................................................................GCGTCAAATTGACTGTGAGCTATGT-.................................................................................................................2511.00101
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTTT......................................................................2421.00220
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTC......................................................................2531.00321
......................................................................................................................TG-----------CTA---TCA-GTGCTCCATATTGGC...........................................................................................................................................2311.00110
............................................................................................................................................................GCGTCAAATTGACTGTGAGCTATGA-.................................................................................................................2511.00110
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTC.......................................................................2321.00220
.............................................................................................................................................................CGTCAAATTGACTGTGAGCTATGT-.................................................................................................................2411.00110
....................................................................................................................................................................................T-TGTTGCAGTTGTAATTCAA..............................................................................................2011.00110
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAG..........................................................................1921.00220
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTGG.......................................................................2421.00220
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTG.......................................................................2321.00220
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTGA.......................................................................2421.00202
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCC......................................................................2530.67211
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTCC.....................................................................2630.67220
......................................................................................................................................................................................................CATATCACAGCCATTTTGACGAGTTT.......................................................................2620.50110
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAT......................................................................2520.50110
..............................................................................................................................................................................................................AGCCATTTTGACGAGTTT.......................................................................1820.50110
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAT..........................................................................2120.50101
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGTTA.......................................................................2220.50110
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTGGA......................................................................2520.50110
droAna3
TATTT----------------TCTTGGTCAAGTTTTAAGTGCCTT-------------------------------------------------GT----------CC-CGCTTCTGCT--------------T---CAT-TACCTGTTTCCCAGCGCGTCGAAATGACTGTGACTTATGC-GTAT----TTGAT-GTCATATCACAGCCATTTTGACGAGTTTGGTG-GACAGT------------------------------------------------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGT.........................................................................222204663.5040932756214508076082228310030318705
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTT........................................................................23275484.501509691360084937355493621111728399
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAG..........................................................................21213410.50268211074254865650426221777
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA.......................................................................24210459.0020918354194327469294200
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA......................................................................2525920.5011841158111724848118
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT.......................................................................2425866.00117329481742112115025505230
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGC.........................................................................2224151.508303774933823017518
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTC........................................................................2322918.005836657461037532
........................................................................................................................................................................................................TATCACAGCCATTTTGACGA...........................................................................2021430.5028611042074878252399
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAAA.....................................................................2621315.502631542451124110
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTT........................................................................222948.0018961084753691331
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGT.........................................................................212490.009804113577107188
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGA.........................................................................222457.509153117930585612
............................................................................................................................................................GCGTCGAAATGACTGTGACTTATG...................................................................................................................241447.0044742791055
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG.......................................................................242316.006323218632388336
........................................................................................................................................................................................................TATCACAGCCATTTTGACG............................................................................192277.5055561287171441
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTA........................................................................232255.5051117296152910144
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAA.......................................................................242228.004563409145322
............................................................................................................................................................................................................ACAGCCATTTTGACGAGT.........................................................................182212.5042542671241083
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAT..........................................................................212180.0036007424343
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGG.........................................................................222159.50319243329721160
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTC.......................................................................242133.50267171759122034
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGTT........................................................................212122.002444617833113
............................................................................................................................................................................................................ACAGCCATTTTGACGAGTT........................................................................192116.00232881339938
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA.......................................................................232107.00214241891000
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGT.........................................................................202104.00208769296115
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAC..........................................................................21286.50173011603252
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTT......................................................................25280.5016129101334147
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTG........................................................................23276.00152377112158
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAA......................................................................24265.50131111200000
...........................................................................................................................................................................................................CACAGCCATTTTGACGAGTT........................................................................20264.50129111070353
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAA..........................................................................21264.0012815171113
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTT.......................................................................23259.5011985240127
...........................................................................................................................................................................................................CACAGCCATTTTGACGAGT.........................................................................19256.0011254931747
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAG..........................................................................20251.5010380140108
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAAA......................................................................25236.50734671001
.............................................................................................................................................................CGTCGAAATGACTGTGACTTATG...................................................................................................................23134.00343400000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGC.........................................................................21233.50670650110
............................................................................................................................................................GCGTCGAAATGACTGTGACTT......................................................................................................................21131.00313000100
.............................................................................................................................................................................................................CAGCCATTTTGACGAGTT........................................................................18230.50618510002
........................................................................................................................................................................................................TATCACAGCCATTTTGACGATC.........................................................................22230.00600510603
........................................................................................................................................................................................................TATCACAGCCATTTTGACGT...........................................................................20226.00522102839
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTC........................................................................22225.50510510000
............................................................................................................................................................GCGTCGAAATGACTGTGACTTA.....................................................................................................................22124.00242120010
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTAA.....................................................................26223.50472414000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTA......................................................................25223.50471342334
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGTTA.......................................................................22220.00403370000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAT......................................................................25218.00362262510
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTAAA....................................................................27218.00361350000
...........................................................................................................................................................................................................CACAGCCATTTTGACGAGTTA.......................................................................21216.50331320000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTG......................................................................25216.50334222320
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCA......................................................................25215.50310715027
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGTTAA......................................................................23215.50312290000
........................................................................................................................................................................................................TATCACAGCCATTTTGAC.............................................................................18214.00286170302
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGAC........................................................................23213.50270261000
............................................................................................................................................................................................................ACAGCCATTTTGACGAGTTA.......................................................................20213.50270215100
...........................................................................................................................................................................................................CACAGCCATTTTGACGAGTTAA......................................................................22213.00260260000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGCC........................................................................23212.50250231100
droBip1
TTTCC----------------TT--GGTGAAGTTTATAGCACCCG-------------------------------------------------GTT---------C--CT--------------CTTCTGCTA---ATC-TTGCTGTTTCCCAACGCGTCGAAATGACTGTGACTTATGC-GTAT----TTGAT-GCCATATCACAGCCATTTTGACGAGTTTGGTG-GACAGTCATAA-----CCATCG---ACA-------GA----------------------------GSizeHit CountTotal NormTotal
No Reads
droKik1
GCTCC----------------AGT-------------------TAA----TG-----------------------------------CCTATT--CTCCTCTCCT-C-CACC------TG------------TG----CT-TTGCTGTCTATCAACGCGTCAAAATGACTGTGAGCTATGTTGAAT----TTGAC-TTCATATCACAGCCATTTTGACGAGTTTGATG-GACAGACT-----C-ATCATCA---ATAAATGGAACA-GGGATATAGATCGTCCTGTG----TGTGSizeHit CountTotal NormTotal
No Reads
droFic1
CCTTC----------------GTT-----------------------------------------------------------------------------TCGT-T-CG---------GTTAACAGTGATCCA---TCATCTGCTGTCTTTCAAAGCGTCAAGATGACTGTGAGCTATGT-GGAT----TTGAC-TTCATATCACAGCCATTTTGACGAGTTTGGCG-GACAGCCT-----C-A--------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
GTTAC----------------ACA-------------------TTA----TAA----------------------------------------GATTCCTTCTCT-T-ATGC------C-----------TCTG---CTA-CTGCTGTCTATTAACGCGTCAAAATGACTGTGAACTATGT-GGAT----TTGAC-TTCATATCACAGCCATTTTGACGAGTTTGGTG-GGCAGGCA-----C-ATCATCG---ATGTC----CGA-----------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CG-------------GGCTACAGT-------------------TAT----AGATTT--------------TA---------------------GA-----TT-----------------------CATCCTTCA---GCT-TTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGT-GGAT----TTGAC-TTCATATCACAGCCATTTTGACGAGTTTGTTG-GGCAGGCA-----C-A--------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TCTTC----------------AC---------------------------------------------------------------------------------------------------------CCCGTA---CTT-CTGCTGTCTATCAGCGCGTCAAAATGACTGTGAGCTATGT-GCAT----TTAAC-CTCATATCACAGCCATTTTGACGAGTTTGTTG-GGCATGCG-----C-ATCATCA---TCGGG---GAGC---------------------------TTSizeHit CountTotal NormTotal
No Reads
droTak1
GTTTA-----TAT--------AGT-------------------TT--------------------------------------------------------------------------------------ATA----CC-CTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGT-GGAT----TTGAC-TTCATATCACAGCCATTTTGACGAGTTTGTTG-GCCAGTCGCAT-----TCGTCGTTAAAG-G---AAAA-GT-----------TCCAGTG----T---SizeHit CountTotal NormTotal
No Reads
droEug1
TCGTGA-TTCGATCGTGATA--T-----------------------A---------CCCTACA------------------------------GA-----AT-----------------------GATCCCTTA---CCT-TTGCTGTCTATTAACGCGTTAAAATGACTGTGAGCTATGT-TGAT----TTGAC-TTCATATCACAGCCATTTTGACGAGTTTGTTG-GGCAGGCA-----C-ATCATCG------GG---AA-T-TTG---AAGT------------------SizeHit CountTotal NormTotal
No Reads
dm3
TTTCCAGTTCCATCGTGCTA--A-----------------------A------------------------------------------------------------------------------CATCGTCTA---CCT-CTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGT-GGAT----TTGAC-TTCATATCACAGCCATTTTGACGAGTTTGTTG-GACAGCCAGCC-TC----ATCA---ACGTG---GAAATGT------------------------TGSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTT........................................................................2325329820.5010659641350130177113162128172163108142107521228826163703920683235063539615028371302492937764813360513978994150611683070021043233352430541425117375073229621599617196343303893840321232871188627210804310506400114000000000000000001099811511876689072273805771410724792821837866444205342528107329911881281276932281875133744654410829812234178413368536080529071376641222153467125633649117551919104180451073118662869837783568205461715272032952351438773170614486155001640413331144904820829691379532192620723243923846548083231632836442102958242501367356718934551411762148150100527534753490483238284273129323781764311075736765111691949910325626966835294110552451918418825478591634156271129667595187442670589543207926454796729912202212787243883106166815198271154493736910681941562407912582996267935622284093610009148934410431449698741988922654934526808557664232124367961917734758899819873158354001413241912539760501281999146980450612969011124232211716658728238510323711880320775963252819509762423523336981485822941380841145767232575886796675880526074275972389427715442873721113268126205225277172134694162576944516105815814504471592910546745229935913098814844323583721093561609209459771291251356829868636721357562725895513124693228114860198944506234864254345765965905187033137212854872215
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGT.........................................................................2222695721.0053914420020353688410510920645121321465661343609601076187968171454032222562211672959104893051401044517156859797430450711401821212747537627216905369150791015213014134577427398917333797240457224600000000000000000392140353251309810012480762297235541871251926062413808952497185108021311156336620414419672231120221913774687712643137512962391134610721633100286224583445530679665174221142556873072751147894748704483013284658514223190757371224917683240601252272971291911894998997991283711488155851535983931061513854734816007971644333068129821557801076848256872106793301003219913142187182458352344010528759579383242803802116384981578110417243888344897555530100161991398935920423272504920970166902405328573637864533456327113050137653667200613661604480686776107139700745388981062929726966145441250452141317581661682412953831117584225347202186031308516655187309279184361804463932683615107172564778790702668732129126491358372127142422116362463202858731472583365625119898123442144491964526312836344782435093435948151268713458961404072130303556611871228941974547410129531604710235943967551819641858384030762177247017347221123754776756653048847241422032644552840354513824109421170491724238046284012483244630101982232791126969105278527
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA.......................................................................242232729.504654590000106525337170617510700264754195803400000000031054950313523297922031733111954331214273961316199515911226118752803600000000000000000000094967589210794325234181037126352619252135628063731619678188227408337193615023289633270636349160143115957048865000016296880413409846903192319217623165332627942194313130619182332123700000298451471741395717427501520113313921175200525743252146694341994533691016360127303026028614661859000002973541281629011127975138010362110436549175552165200311474004223405151102119236006836109385521891554930248741171571258471202371594229427225547592331488488628178634880238481248140874487011908395761454553077101753691264119480813027519817218917571211944127171206452120352329844901035217251521311610427887992122652038611235409138759529973560468965432166403211920253814641169274384850741116212
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT.......................................................................242163347.50326695001010102114310130025004612411740926270109237242538168180233691375036668213884303343302654596623345144010151124280000000000000000031430425926535914311632163831533207157861741021284382842834903925276151013034546116452281308238561231521012900000030905567866055444152011111036105668911464387139553960120010812075071346601279306424029520320276925610516147092536191669459879681322549129070012294086021675380000052367266109204879309820155692081367203210191853835195103100646460207154100132122713003331406484169636207456441207669125147443141114313287151515824244893957102434075171689203678879556338371190559861939051511849042691486819431172209524825351585108113101293112553952641425915263775697418134076927323012965943081422630033133782257223483944043575452824422634043174280129620514105170011231415143013924352355398665745601215
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA......................................................................252121067.0024213400003310893359000110000013444012100020000000545254165728106300609984811837360489412721449239283122000000000000000000000001675702071921635471192421211114071519117225215722366952752817424482451113450145000002090172000052344100358399143202301223613679122522914149559513542796359000004806102302644031001218119022036017747490322341776188172719246572158379000001904462525324115115883920725110926562721214717799414330312851005810002962382772141442010171050111891029161426342162628629748186212820643889272873470202363586973208830251086876411182322171718167053913224627729371072932101508113473019418939976424139071105774932714951147310663450277961891839965303050491750
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTATG...................................................................................................................241118955.0011895500001041212040222410500708384000201521891932218163224101132213691425821943362179711262083582331160009198180000000000000000024362622135329351242671441462168675226851236128434612541873944333373810629292112300021202044102013312000227297123211755253044903581493903193621994171503458341673081991062714092115739972629341355397431418152303156182651833214010128913001002351730081009126392584134551021565718167128685156418366295669601000154152210156274291227140217580233516264403571682032257624484550184252377029478459777929323419288261115133226604436147732959445186982151251294153400418530869016325814341256923593758355111413251091281981146898976300530712561293152594346310972340112211201290180215585195223189517307113154246966630739
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAG..........................................................................212106682.002133640000961617251027276138900591004810029213401436375983118910865951272122624232132701103675532612102575120127170942624514856446126555472700000000000000000569547456445306224124119250492311361282371512159312402735782826991512622426171034140817365515105567154711624942321146319116816262618268394392485113591744242777499516499437277403393274369509320365271196303003243854421786282437668710528208551121994127766655618151093962796804311907103174193147164183711745300000135297011212030036233820181651334425376610129613064232661591640154843402900820011313857511183021901194767854159651021755157411851393665700569144059747560844415792659981721472849821268834592256125637718092617123543821005347933758164915216232279204721993011411217743723713712042576326660199217148147432554522078692102191534571540521977127158602921254613745624449326910790663965642697534378412111
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAAA.....................................................................26260619.50121239000000351122000000000024127650000000000001124337029100113591358415245151452138343832500000000000000000000000112003171683914492000001004220000014021166710705651262003000000000200000314002086103116068507774902151118202564181751702391300000000003023000012000101000000337568537452351124211970000066522080311000102401519247114110913046805742361993200800002920037101010012108001400230002304105242671478447831667065352523612454150233101020914442553091423277088121590222010219522566540411310130602233728792465722325144
............................................................................................................................................................................................................ACAGCCATTTTGACGAGTT........................................................................19246892.00937840000000000000000000025144064111178521092572172342463363839620913126962534711759158242081061345064028500016000000000000000000232401362232000001212040010130117000561000000004215125339072512855131211800001233305541440436522637812359049156634756056747764484150131932981151413934742902301218328413295113504102549217809524177313830752715514695900000203546510000141190853992952172612341411305684186729049510010000144165141217613816456157375316958181350112187143493752003455002385794662721366432772863409250245352311219332268903319702530985951607701267379194232127161160237172929726308125496265308511141794230917339448621138316217199257109109145371245213666384086672021402940
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTA.....................................................................................................................22119369.00193690000001100030100000022310431500000126272729202154051777500010630000000000000000052766053046054211780753475119661110711110821041731832852086010150020100000100000000012005248046111281051075800000160266454156208501410519156137708378771321431361120540000061700100071339223726355125095643742292834010015204391991067072213206225110234922371291191422899163659136692615955788750675398594938235691565699929191453010121106849232221363113511561262601991514981658802191561325404668671025101491911984015244015
............................................................................................................................................................................................................ACAGCCATTTTGACGAGT.........................................................................18217071.0034142000000000000000000004370117418386137254243120142146230771426381153153882291551412181751492181090000100000000000000000082187177730000000000000100000000020800000000071181461500501849321370680000000200166317467406266189333266293256294341316301165011009641291076022284365017811332658265345038220192146218562180578000149639600000428801100093110691851218010648321641055012231641000000010011789028711394531088213712493185256101225165209208112198231102334179181603114307351120115937851546969104487610966618332634846115835932022837894188977055536123889181214527126340766811331881006118126655493181813525207439275812028452215
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGC.........................................................................22214993.0029986000040110403048001307410730082000000003291129525638561211325127115135895610520000000000000000000017812131317107127120031027240026212134235304201145901920080123016042313917000001001012364494451139482729387046835000000411311366341711600135004834231010761171121414239235810211413000808600000193110010023012885503614221310382211190015210015201917881526758583172423160136321891374315850964437126591681533110477544511403216834217432731986275142516733453217177934229825824787741914151341136676486311126311654757220151464868882192603131612227618816223274133832438887381323698162654610
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTT........................................................................22214625.5029251000020211200030000107103100010810000000121718101373478248606119615460272615930981000000000000000005666445329065726142166021682061815027731089715244230611110102065120401200000023003112313371478285620284249735100000875721385838360181172302302103380201524057928141500110416100000202400000069485255611016209601182112648121411520000151815963934156187481071611434406103382973254553362024412017149613268351264653222390352535128082124491136431443039758728171324247944722962349291331928833373872949136815314501431219510711164217184927306218641029628238
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTC........................................................................23213964.5027929000050213191011110010025380023000000023964124825415418314474064751150000000000000000000005154312153332311370213400169114474039111001413190104060131805122700001000100312251343318241117272636260000044110142342531017004980100191377168150211123911170001001430000019390010005121204834276521738304172010471030015183362032241040101542123448123842108217665516494227121326777275421543503240525864834773391297710767171181435489601218416534258529115167427420060146291721305178110181219762648084979235797411754161955332242708891781061
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTAT....................................................................................................................23113085.00130850000001100000200001076140000020000091589594111812372991020168000116200000000000000000779379961392261624534830172313141180051723074641531362426363192100101001000000000000003023344422710373025232238382014001004311621828104100310141842413316151764601232194400092881000024700040002661978345351114851816141351375423386000031070125011897161011635918787805465254278728118789121232941135422251124183251292313729160647513553195232179623176623204002394386723062013851550335483753941174881241551101443948910399334411030222844451459256457834
........................................................................................................................................................................................................TATCACAGCCATTTTGACGA...........................................................................20211508.5023017000021100001012001000210141301643671915514715162442710118533545147103105282856065014840000000000000000075917564132576152132155014241138213445513832314398100627336363151531090110136614215942121801232186611000307481131398201227281527258515100110037435026431628041101891761191712117071373195195574155208453582079000100690000071300400031373211315729187230016521360912766427914429210009963221913938343375516921147882304438676325542810863438187188512278583010835830107153474112358307431513821618820333520162316119017213242013101515641110452978262191243452750148114377039183933419041985830621022
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGA.........................................................................2229927.501985500002076101514342800030012212500220000000161315104646941451367414212264911351000000000000000000006768475270805110113261314300549022031151640433271000203141254402001466273518126280000000000511282020417191782516121950000091028341431231220780136113373101373209330739631326319111110070523000007240000005222231716171442565811644351624391001133000710915638743101129118174225752811131821261736930134285306036293413242150512550422923561591231254336151051651241621234418832027445312221150347319185246826372339335414524312201715243723201813302734422393281081360
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTA........................................................................2329840.00196800000320766405172003103534101026900000001111224532010134819738132150604329380490000000000000000000001510713211101616272252460835300422213172100528516824580113030833101312711000000000097471463926595754472125444418000006433322920143748028102326127345250601646420831445028137300113440017000001567000000169865835423983124817829176802321125515600141142121313191382527441525114237213214444246215444877973916171328858285934276934302108623696217244203234186798576964723817147124471091895254473153838129513628527968110163312817323621559733088302053402148924481261830
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGG.........................................................................2229586.50191730000100012000100000010720118000000001152120954005418313535211053522120000000000000000000059370404423328101101261013220332293411150450060817030107740162192400000000009444758162220172126204528401200000192318247596071001056211241754485042037261524962400000191300000817002000462724163241833456322151700320000222141175923862949635337476012383452323349381248262610222559718301884218346461389631200832978923914319436382438378393635566181218393113871041179211987692306410182717421330124113234501113585221510631672031371381
.....................................................................................................................................A---CCT-CTGCTGTCTATTAAC...........................................................................................................................................1919174.00917400000000000000000100101342040000000023138351656142218371467483548322738380000100000000000000000014220282630613741656212029021400111200277215099112022220642021000000000000000000000424563645212127446840136911467390000013802330500100020103018009110004686341005063000000430000002329118137154116244158741234385434100250000138824441637111114157264533106381633046872626455816329608537481461112012171913121634116186326123102851676152513103214668934205417408170650034002313315521341396022620
............................................................................................................................................................GCGTCAAAATGACTGTGAGCT......................................................................................................................2118188.0081880000000000000000000092800700183610104253855195307038114726001616000000000000000004659365701005012200120046110100021826272224061030000000000000010011011252245767704126945238600000143222985358584603201710314230053030700161860010100000038010000252129874242435120211768192370000035203293983404005371714132351021448531572166051942562341126182362234015826189301955791449134133613108458830131196548332489516891841314620261233525610181425101977116870211113140
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTC.......................................................................2426114.5012229000020000001010000001253000360000000071512894508111622171714960453110000000000000000000000001914109021065125212100345100240172635334021036175020121204316500000000000364439252445474332211645421700000331112131319120300880509013000158702528372343021122402200000222800000068432027977677348712588313014118003344140013725425154182111511183151782361044411131272145214652214319202105926710122741240199731581560241242217269447553518345365139182156818961479511225620447112663439143545521733211441321937561481441730
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAA.......................................................................2424432.008864000000310101021000008101720011000000078315812326109218512195512140000000000000000000000053550316167375110110621130000011719202411100612200310200160105200000010009879745724425701538511262180000041001110911040076050100110003130101664215634003383261290000055122100000371491371309122181513735190017000061003342017153545741063545100615198113193281427785219373328394092277264386281181211725122039114196581391310151338265214936943107266134134618568313322222492616440
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTATC.....................................................................2624348.008696000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002000000000000000000000000000000001000000000000000000000000000000000000000001010000100068271851000000000000000000000000000000000000011222000000000000000000200000000000000000000000000000000000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGT.........................................................................2124122.00824400000000001100000800204301156000000024261425214514114647710431540121000000000000000001521101818016552502020292500424101920293410700014105303012702011000000000031480529997146351200000410366191314130800818121070840412110033487421010051200000230010003832282418564381121262000200000350221342104115312626331117189261325165206166311265113171316712599169573622523877311193272525143318853235371571753138531528453406121421131491173751304618621111241712392013581671910
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTG........................................................................2323925.0078500000611311023500000003020040000000107267755296271305016753001110000000000000000000057460002011530201110030000101042322935242092607602020804013400000000104961610714595512173160000056824012624210250031104020182269052422063513511000201570000056000000754355558011101013800400003701815861434934172410844142116143251811221385172293692754363423813229410321378242717613285626163932697225421510722131092471010284226176621043122151071018160
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG.......................................................................2423487.5069750000000220001420000066300170000000118283972272122155178202618131460153000000000000000000002423151104310001002000000702854150200113011000122000120000002100259083574023163927291317676000002073004301005811501852310006301316191014000339230000024400030001714136188984027778637241915134002800002801015191751984216141729978612102326519174439115244930913744012737314950911831732313319322614282125130286124185348282611312113679011914020292531835301327251214165828301460157123850
............................................................................................................................................................................................................ACAGCCATTTTGACGAGTTA.......................................................................2023201.00640200000010000000000000278630001300000004011132771417241515743933463211351300000000000000000000000444400001000000000000100000000000000000061100117200010000000120312613776615784105839963535441900000207330840300320503010013800361139450019668000006417500100041721220171364515117438000010008110111205012011302005226034310312927123310502456942336191714458200011123111200428906180100011261626032300122000100114002120
...........................................................................................................................................................................................................CACAGCCATTTTGACGAGTT........................................................................2022969.00593800000000000001000000470200240000000011401231003200726200000000000000000000000192212220000002000500101010000057690020203001100000101010000000000007200112912221010479200000135282113332010016140002001131701018050001000000000300000021101487643156100160011000045000200111207104242417635342181020741554273969322734146529494390101424717241213193511045241377132910736114568360020003432814559
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGTT........................................................................2122575.0051500000000002001000010025012001501000000021010113242469371000000000000000000000001622117131018165741322143213271521151716375871701852932469521100200101060001100000000000030111245602000000002472611628450410070610030042901518240004040000005800010081121130316926129363910040000790931512122331241014275112812196231243012195261214302738923339725610431015411101678143170090531379185812910716194281115917313171419302161120129221456603323
........................................................................................................................................................................................................TATCACAGCCATTTTGACG............................................................................1922548.505097000000000000001006101513001214524234371103040671232317461000320000000000000000003839273252000254405901165142210280142312910133143280950000151467600231330000212128525169614902140010061634102511330132927625181411112029214813851010000100000000012000007883848151392038382635468122518700002226525712191927410321837671614261918913722372171232282411411348111437623419121573620571372141591314113112887253728047042001806416188869171172702976
........................................................................................................................................................................................................TATCACAGCCATTTTGAC.............................................................................1822347.504695000000000000000000001607000191232621284201000000020301200010000000000000000000000018171970210002300420002232000112660020200000000001312192320911332091000018340100000222300000010000000025094720412731260513200070135900000300010000420000002408154540573831014221040000000022001001003100020210011155614844512021123151121021250152401311030005320100000000000040000000411129
.............................................................................................................................................................................................................CAGCCATTTTGACGAGTT........................................................................1821983.00396600000000000000000000122701002000000004051001530542621103000100000000000000000001611101100001040001000001300100076600001000000000200000000000000000595701587304239168332000001914147855202003106000000123231342826000703120000031020000042193527171214003000011000000052020120200203103020731756116421414252449147746743564435161362111718218627513185529329965221143421092032577734141610121110201122351476289
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAAA......................................................................2521499.5029990000001000000000000013700000000000431142501340121533130000000000000000000000000110012122213000000000300000000410001030060000000000200000000000002384427291454061502274000000000000100000001000100000001917211100040250000009530020001011330771152522850500100001002000020011010000010110021022010105274813221204451773112001000334011133464204510110330848173300500902000221332713050150
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTATT...................................................................................................................2411334.00133400000000000000000000525000100000000151545144101910514350000000000000000000000011010480007000400000000000014140000000000000000000010000000000000300527917542200000001931527622010000010020116914000000010000000000066000000333370200001100001453901002000417101740630918116141178342201619771425156111611814181236721020043633315534052757733191944361012901002110101330030
............................................................................................................................................................GCGTCAAAATGACTGTGAGC.......................................................................................................................2011275.001275000000000000000000000000050030000014720003300010000101300021700000000000000000403820320000001300100000000000103531000000000100000000000001000000001000110020000000100048000160011003051611013137001020000000000000000000000717133100110000161717160000000013410391020021471006640245214225391220132151101611927634001110003212110101201209141521430811015022111000107413146
............................................................................................................................................................................................................ACAGCCATTTTGACGAGTTT.......................................................................2021244.502489000000000000000000003500006101000000426210591045715118132000000000000000000000001513178000000000001000000000000000000000000840105847100120000000000323192011826292314311417291100000561025352429010001914012170310123106251116130009112000000131400000013211015167184616731070000000022030121133841613325014312429134318172210465019488230541404310188301511139734101111204103800027429101022121612457015232027210640
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAT......................................................................2521231.00246200001121000000000000141100000000001332414103010324218111100000000000000000000000013107211381220010011100000072910000100101000000002020000000000013835127482132411093300000400010550200120503050000103149550002111000000122000000040123740151217291541394006743000410001114120214041040512203626252163216702337423951196446041165262111054690172717010626315271321112133038354023332110
............................................................................................................................................................................................................ACAGCCATTTTGACGAGTTAA......................................................................2131195.673587000000000000000000001338100000000000119619065888012116235116100000000000000000000000021000000000000000000000000000000000000010000000000000000000000161181213846382669224048112070000000000020010001010000000010076711500002010000054226000000200412094168746240000000044010000000000200000010000300200101267151374431324734112400000000022200028281800000010620010100010000001231000000
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGT.........................................................................2021176.002352000000000000000000100207007000000011110202000200022100000000000000000000000022112128251761417109909851931621700173261721626247512403303011530203200000000003024001001101000000012511113106902006408000200001919021100000100000005000100342010010152110700000000540558928231357133138995980146320411203117721124106269726627185086411027110018380633013531648119102660791082200191165420257046402
....................................................................................................................................TA---CCT-CTGCTGTCTATTAAC...........................................................................................................................................2011087.00108700000000000000000000102100000000000173042371221321113210000000000000000000000000110102420302100102000010012115010002000000000000002000000000000881512193106027111200000100100000000000000020000000261200000000000001000000100301453682419205431543830040000402010715002026243036041014114562110102021201110610102420010193781701005048382415418512611601010012114372360
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTA......................................................................2521019.50203900000000000000000000110000000000005116110583122620282100000000000000000000000211204220452000010000000000022702200100301000000000020000000000002824181659138142310540000000000005040004000404002710046580000050000008200000005000101084111915362840030000100700101000013331031421302313913053212371895931843119017235112302010330631220393115302065828503444201534604170148240
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA.......................................................................2321015.502031000000000000000000002200001000000000211404010523434400000000000000000000000011000000112000000000000000010200000000300000000000000000000000004701036424120200000000000011000010020000000010114130011023000001110000002010300110411021001000020000000000001100000000001012100207258940326343511417590200001114600202458428010011172934202302110400101411113240
...........................................................................................................................................................................................................CACAGCCATTTTGACGAGT.........................................................................192907.001814000000000000000000001000001100000000010101110000010010000000000000000000000004616002000301001000001101500130001000000020100000000000010000003528037411900010000091713072903002515010200692405021200010000000002000000105135420000200100000000034020001010024111152310014207043102169744137811772061221214222113824307140312356551121417113223224202141315754121135
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTAA.....................................................................262898.0017960000000000000000000004000000000000002200053102046225000000000000000000000000101007340133000000001000000020001000110500001000000000000000000032129542855757031900000000000001010000030000000000007112000001000000810000000050361052157762331000000011070000201000010000000000100000002819764240633802094101013010231010624391529000002322269000101112101201233011270
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTATGA-.................................................................................................................251823.00823000000010000000000001000000000000000000000100000000100000000000000000000000001100150214310000500141000000042817131310501100000000000000000000000000100131330010000000500020000000000100000141000000020200000000001100000010401310011001035161222000000000212000011022102517243316733011773541837828965021100231001212124513006163221754761316711901200110473814
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTT......................................................................252814.5016290000000000000000010012100020000000100101018000226545100000000000000000000000648600030063001000012000040392255000000003000000104031000000000007433316882214260000021001105303002103091100016905871020001010000001300000023133121016101519844161000170000000028805042001112111131221431022316942220532510526952188881131244545120103213110171112132981229168227281158509157358334165225250
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCA......................................................................252809.501619000000000000000000000100000000000000240111318412437094010000000000000000000000000000121430000000010000010001100000000200100000000030000000000011316713434262452400000000030200000010001000004000171600000000000038000000200150104134009000000001200000010000130400211211010013031433183316645193675205000030631610127232351604000381339103341141200142311342329110
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTATGT-.................................................................................................................251627.006270000000000000000000000000000000000000000110000100000000041300000000000000000101300000166001000100000400159109020101100000000000000000000000000000013301020000000060020511000000000010101720000001000000000000100000001436121000100000713131300000000142220300358110463547222265235140834071821318103231011602317060030726886118704195721414424442232410
............................................................................................................................................................................................................ACAGCCATTTTGACGAGTTAAA.....................................................................223625.0018750000000000000000000046200000000000111160219410707710600000000000000000000000000000000000000000000000000000000000000000000000000000000000000053541314713293161042000000000000000000000000000000000121080000016000001810700000000011003421410642900000000110000000000001000000000000000000010331412332986307204000000000070000051814000000359000000000000001300000000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTCA.......................................................................242514.001028000000100000001000000000001000000001101002200013420120000000000000000000000000000100110000000001000000000000000000300000000100001000000000001232010200212000000100060100000000000000000002111200000410000066000000000220010042105000000000100000100000010000101102000011011302522012333206982021010011146002155181090000031059100111101000100100007100
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGGC........................................................................232418.5083700000000000000000000000000000000000000001000010010201000000000000000000000000000000000107000000000000000101000000000000000000000000000000000000001110020100000000000000010000000101100010600000000000000000100000000000030001000000000000010100000000003011010210200002101011151111261921313938410212332119101129301111130100000000000000000000001000000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAA......................................................................242415.0083000000002000000000000000000000000001001001210120030000000000000000000000000000000031414000000000000000000000000010010000000000000000000000000550020000001000000000000000000000000000000000000020000004000000400000000000000002000000000000400000000000100000001000001000000033267281372016542300000000091000261721200000101221100000000000000421000010
droSim2
TTTCCAGTTCCATCGTGCTA--C-----------------------C------------------------------------------------------------------------------CATCGTCTG---CCT-CTGCTGTCTATCAACGCGTCAAAATGACTGTGAGCTATGT-GGAT----TTGAC-TTCATATCACAGCCATTTTGACGAGTTTGTTG-GGCAGCCAGCC-TC----ATCA---ACGTG---AAAA-GTC---GTGC-----------------GSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTT........................................................................232545309.00109061817165671161403025186880831798138027915658711840841217141472043212984138
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGT.........................................................................22275694.0015138848015101986119441632595420404206621079988722174841658157251145
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA.......................................................................24264630.50129261105125229400166461986746358386683806116222199000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA......................................................................25245092.509018530142192700631573763635634779265550711015000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAAA.....................................................................26230397.506079500447690073808103262961720788181304000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAG..........................................................................21213273.5026547357139652113443154121364964181731481005301534130114
........................................................................................................................................................................................................TATCACAGCCATTTTGACGA...........................................................................2026109.0012218235171483197672968379002902462099639106
............................................................................................................................................................................................................ACAGCCATTTTGACGAGTT........................................................................1925143.50102878819620102738147314958010046000
........................................................................................................................................................................................................TATCACAGCCATTTTGAC.............................................................................1823814.0076287799617285622262938106004001
........................................................................................................................................................................................................TATCACAGCCATTTTGACG............................................................................1923487.006974175292413399638944310147803000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT.......................................................................2423450.006900321449147729141089107167045160121718132010
...............................................................................................................................................................................................................GCCATTTTGACGAGTT........................................................................1622732.005464000000153167184874873000000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTT........................................................................2222502.005004202290652525266123722731702665000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTA........................................................................2321873.003746523860093011268805567933244000
............................................................................................................................................................................................................ACAGCCATTTTGACGAGT.........................................................................1821588.50317732230622333272939200000
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTATG...................................................................................................................2411412.0014129310212415063559128953959000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGA.........................................................................2221024.002048481004000706623345203343522000
............................................................................................................................................................................................................ACAGCCATTTTGACGAGTTA.......................................................................2021018.0020360120005313126916111400000
...............................................................................................................................................................................................................GCCATTTTGACGAGT.........................................................................152898.001796000000595975141589000000
..............................................................................................................................................................................................................AGCCATTTTGACGAGTT........................................................................172779.501559000000135164148341078000000
............................................................................................................................................................................................................ACAGCCATTTTGACGAGTTAA......................................................................212749.001498002200341113511023200000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGT.........................................................................212467.00934601753454131849541502001
..............................................................................................................................................................................................................AGCCATTTTGACGAGT.........................................................................162447.5089500000056497318699000000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAA.......................................................................242437.008741141400831223122405320222000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAAA......................................................................252433.50867100170010813736921617200000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGG.........................................................................222391.0078234051209500815731812600000
.............................................................................................................................................................................................................CAGCCATTTTGACGAGTT........................................................................182385.5077100364210201020691410000
...............................................................................................................................................................................................................GCCATTTTGACGAGTTA.......................................................................172372.50745000000182112560521000000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA.......................................................................232286.5057300017400385116513112110000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTAAA....................................................................272280.00560000500968921414411010000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGC.........................................................................222255.50511263265319009887506800000
............................................................................................................................................................GCGTCAAAATGACTGTGAGCT......................................................................................................................211247.002475514198544161711947200000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTG........................................................................232215.5043113310001721935140210000
............................................................................................................................................................................................................ACAGCCATTTTGACGAGTTAAA.....................................................................222202.00404000100233362302100000
.............................................................................................................................................................................................................CAGCCATTTTGACGAGT.........................................................................172197.5039500000037104371000000
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGTT........................................................................212178.00356000147042776218611020000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTC........................................................................232173.503471998180077622317882303000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG.......................................................................242154.003085236261003587604700000
................................................................................................................................................................................................................CCATTTTGACGAGTT........................................................................152152.5030500000074713714109000000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAA......................................................................242150.50301000130001313617310100000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTAA.....................................................................262148.0029600080029201271027210000
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTAT....................................................................................................................231141.0014100024157843766601000
...........................................................................................................................................................................................................CACAGCCATTTTGACGAGTT........................................................................202121.00242200196411162112145501000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTC.......................................................................242116.00232203270036255138311801000
............................................................................................................................................................................................................ACAGCCATTTTGACGAGTTT.......................................................................202114.502290000000000229000000
............................................................................................................................................................................................................ACAGCCATTTTGACGAG..........................................................................172110.002200000000000220000000
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTA.....................................................................................................................221108.001080001512792111733011000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAG..........................................................................20299.5019930090148810003000000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAC..........................................................................21298.00196167131600000000000000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTA......................................................................25293.00186000500141961659625000
..............................................................................................................................................................................................................AGCCATTTTGACGAGTTA.......................................................................18292.00184000000918621580000000
.............................................................................................................................................................................................................CAGCCATTTTGACGAG..........................................................................16273.501470000000000147000000
..........................................................................................................................................................ACGCGTCAAAATGACTGTGAGCT......................................................................................................................23173.0073805400083000000000
...............................................................................................................................................................................................................GCCATTTTGACGAGTTT.......................................................................17271.001420000002130136000000
..................................................................................................................................................................AAATGACTGTGAGCTATG...................................................................................................................18169.0069221400000060000000
..............................................................................................................................................................................................................AGCCATTTTGACGAG..........................................................................15268.501370000001103132000000
............................................................................................................................................................GCGTCAAAATGACTGTGAGC.......................................................................................................................20160.006010031317220021010000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAAA.....................................................................25259.0011800038008939176010000
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTATGA-.................................................................................................................25154.00540001002714334110000
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGT.........................................................................20251.5010300248041312261600000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTT.......................................................................23250.00100000688832253001000
.................................................................................................................................................................AAAATGACTGTGAGCTATG...................................................................................................................19149.0049200100000045001000
..............................................................................................................................................................................................................AGCCATTTTGACGAGTTAA......................................................................19348.67146000000117611453000000
............................................................................................................................................................GCGTCAAAATGACTGTGA.........................................................................................................................18146.00460000172900000000000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTG......................................................................25239.007830108223610172600000
...............................................................................................................................................................................................................GCCATTTTGACGAGTTAA......................................................................181336.54475000000897352333000000
...........................................................................................................................................................................................................CACAGCCATTTTGACGAGT.........................................................................19235.5071001204013054600000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAT......................................................................25235.007000060047211910300000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAA..........................................................................21234.00681203005326213112000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCA......................................................................25232.006400210075151931200000
.............................................................................................................................................................................................................CAGCCATTTTGACGAGTTA.......................................................................19230.5061000000103750000000
.......................................................................................................................................................................................................ATATCACAGCCATTTTGACGAGTT........................................................................24229.50590003120210180410000
.............................................................................................................................................................................................................CAGCCATTTTGACGAGTTAA......................................................................20229.5059000000205646000000
.............................................................................................................................................................CGTCAAAATGACTGTGAGCTATG...................................................................................................................23129.0029000250000004000000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGA...........................................................................19229.00580005163610000000000
........................................................................................................................................................................................................TATCACAGCCATTTTGA..............................................................................17426.0010400000012165962000000
............................................................................................................................................................GCGTCAAAATGACTGTGAG........................................................................................................................19123.0023000010900004000000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCT......................................................................25222.00440000001182050000000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAAC.....................................................................26222.00440001001322132200000
................................................................................................................................................................................................................CCATTTTGACGAGTTA.......................................................................16321.33640000007724719000000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGG...........................................................................20221.0042343310001000000000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTATA.....................................................................26220.00400000002819100100000
...........................................................................................................................................................CGCGTCAAAATGACTGTGAGCT......................................................................................................................22120.0020411100021100000000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTGA......................................................................25219.5039000100221668400000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTGA.....................................................................26219.50390000001414920000000
...........................................................................................................................................................................................................CACAGCCATTTTGACGAGTTA.......................................................................21219.5039000100156817100000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTCA.......................................................................24219.00380000002415142100000
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGTTA.......................................................................22218.5037000100039726000000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAC......................................................................25318.33550005000415237100000
.....................................................................................................................................G---CCT-CTGCTGTCTATCAAC...........................................................................................................................................19117.001730050200004300000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACG............................................................................18216.00320000102200000000000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTACA.....................................................................26315.67470002007417170000000
.................................................................................................................................................................................................................CATTTTGACGAGTTT.......................................................................15214.5029000000123320000000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTCAA......................................................................25214.5029010200331271000000
...................................................................................................................................................................AATGACTGTGAGCTATG...................................................................................................................17114.0014000000000014000000
.......................................................................................................................................................................................................ATATCACAGCCATTTTGACGAG..........................................................................22213.502730340011106800000
............................................................................................................................................................................................................ACAGCCATTTTGACGA...........................................................................16413.0052000000200050000000
.........................................................................................................................................................AACGCGTCAAAATGACTGTG..........................................................................................................................20113.001341200000006000000
droSec2
TTTCCAGTTCCATCGTGCTA--C-----------------------C------------------------------------------------------------------------------CATCCCCTG---CCT-CTGCTGTCTATCAACGCGTCAAAATGACTGTGAGCTATGT-GGAT----TTGAC-TTCATATCACAGCCATTTTGACGAGTTTGTTG-GGCAGCCAGCC-TC----ATCA---ACGTG---AAAA-GTC---GTGC-----------------GSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGT.........................................................................222133059.00266118149332542674068151691
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTT........................................................................23279718.0015943653359306864036235029
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAG..........................................................................2127510.00150201879702132011119
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT.......................................................................2423517.507035117431605112190
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA.......................................................................2423292.00658418024213866495
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTT........................................................................2222016.0040323873396555
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTATG...................................................................................................................2411380.00138062816450583
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA......................................................................2521337.002674570931869142
............................................................................................................................................................................................................ACAGCCATTTTGACGAGT.........................................................................182682.501365215512836
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGT.........................................................................212563.0011269651922120
........................................................................................................................................................................................................TATCACAGCCATTTTGACGA...........................................................................202557.0011141442856886
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGA.........................................................................222345.50691686434525
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTAT....................................................................................................................231248.0024892498918
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGC.........................................................................222234.004682250140256
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAAA.....................................................................262223.504471631321754
............................................................................................................................................................................................................ACAGCCATTTTGACGAGTT........................................................................192206.504132915207162
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTA........................................................................232204.00408967591146
........................................................................................................................................................................................................TATCACAGCCATTTTGACG............................................................................192192.003849018285
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGTT........................................................................212120.0024017245212
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGT.........................................................................20297.001944749053
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG.......................................................................24296.501935785474
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTC.......................................................................24271.5014353222642
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTA.....................................................................................................................22168.00683615134
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAG..........................................................................20266.00132124305
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAA.......................................................................24261.501236326223
.............................................................................................................................................................CGTCAAAATGACTGTGAGCTATG...................................................................................................................23160.006056130
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTC........................................................................23259.5011921343133
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTG......................................................................25259.0011819254628
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA.......................................................................23255.50111108030
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGG.........................................................................22247.50951482350
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTT.......................................................................23247.009490202
............................................................................................................................................................GCGTCAAAATGACTGTGAGCT......................................................................................................................21145.004530555
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAA..........................................................................21230.506168047
...........................................................................................................................................................................................................CACAGCCATTTTGACGAGTT........................................................................20229.505941963
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAT......................................................................25225.005015431
.....................................................................................................................................G---CCT-CTGCTGTCTATCAAC...........................................................................................................................................19124.002421030
...........................................................................................................................................................................................................CACAGCCATTTTGACGAGT.........................................................................19223.00461431316
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAA......................................................................24222.504544001
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTT......................................................................25222.0044918512
.............................................................................................................................................................................................................CAGCCATTTTGACGAGTT........................................................................18221.004230291
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTG........................................................................23218.503720458
.......................................................................................................................................................................................................ATATCACAGCCATTTTGACGAGTT........................................................................24218.003635001
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTATGT-.................................................................................................................25117.00177433
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAT..........................................................................21216.5033153213
............................................................................................................................................................................................................ACAGCCATTTTGACGAGTTA.......................................................................20216.003210283
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCA......................................................................25214.502934202
............................................................................................................................................................GCGTCAAAATGACTGTGAGC.......................................................................................................................20114.001414000
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTATT...................................................................................................................24113.001312100
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTA......................................................................25212.50257666
...........................................................................................................................................................CGCGTCAAAATGACTGTGAGCTATG...................................................................................................................25112.00128310
.......................................................................................................................................................................................................ATATCACAGCCATTTTGACGAGT.........................................................................23211.00229049
........................................................................................................................................................................................................TATCACAGCCATTTTGAC.............................................................................18211.002219012
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGG.........................................................................21210.502121000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAAA......................................................................25210.002051104
.......................................................................................................................................................................................................ATATCACAGCCATTTTGACGAG..........................................................................22210.00204259
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTGT.....................................................................26110.00100352
........................................................................................................................................................................................................TATCACAGCCATTTTGACGT...........................................................................2029.501915112
.............................................................................................................................................................CGTCAAAATGACTGTGAGCTAT....................................................................................................................2219.0098010
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGA...........................................................................1928.501717000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAC..........................................................................2128.001631210
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAAA.........................................................................2227.001402111
..............................................................................................................................................................GTCAAAATGACTGTGAGCTATG...................................................................................................................2216.0063030
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAG..........................................................................1925.50119011
............................................................................................................................................................................................................ACAGCCATTTTGACGAGTTAA......................................................................2125.001000100
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTAA.....................................................................2625.00101324
................................................................................................................................................................CAAAATGACTGTGAGCTATG...................................................................................................................2015.0052120
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAAA.....................................................................2524.5099000
............................................................................................................................................................................................................ACAGCCATTTTGACGAGTTT.......................................................................2024.5091125
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAC......................................................................2534.331330100
.............................................................................................................................................................CGTCAAAATGACTGTGAGCTA.....................................................................................................................2114.0044000
droYak3
TCTTC---------GTGCTA--C-----------------------TCAGTTATG--------------------------------------GACT----------------------------CGTCGCTTA---CCC-CTGCTGTCTAGTAACGCGTCAAAATGACTGTGAGCTATGT-GGAT----TTGAC-TTCATATCACAGCCATTTTGACGAGTTTGCTG-GCCAGTCT-----C-ATCATCG------TG---AAAA-GTC---GGCC-GTTCAAGTGCATTT-TTSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTT........................................................................23284944.501698893087811550854129056315114279809874596
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGT.........................................................................22269072.50138145111021593363993347214521243326622121479
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAG..........................................................................2124102.0082046802618171519603876491900050
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTT........................................................................2223758.5075170679363533828110009
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGC.........................................................................2223341.006682674563175726152180000
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTATG...................................................................................................................2412533.0025330125110164931687100047
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA.......................................................................2422523.5050472176022148584393770000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTC........................................................................2322006.0040126193906181142100000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT.......................................................................2421937.503875717944792242744826150000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGT.........................................................................2121086.002172017973301691440002
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA......................................................................252860.001720064666936948240000
............................................................................................................................................................................................................ACAGCCATTTTGACGAGT.........................................................................182425.008501154033916828160000
............................................................................................................................................................GCGTCAAAATGACTGTGAGCT......................................................................................................................211294.0029481226412520000
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGTT........................................................................212257.50515038011944170000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGA...........................................................................202241.004822822556503073200000
............................................................................................................................................................................................................ACAGCCATTTTGACGAGTT........................................................................192222.004440646612552117200000
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTAT....................................................................................................................231213.00213031150529160000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAAA.....................................................................262209.504190211160350060007
........................................................................................................................................................................................................TATCACAGCCATTTTGACG............................................................................192190.5038120513185131300006
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGG.........................................................................222186.00372105651868268640000
...........................................................................................................................................................................................................CACAGCCATTTTGACGAGTT........................................................................202131.50263012712312280000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGA.........................................................................222130.5026166868292653110000
.............................................................................................................................................................CGTCAAAATGACTGTGAGCTATG...................................................................................................................231129.001290129000000000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAG..........................................................................202123.0024602331210000000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTA........................................................................232123.0024626269393223180001
............................................................................................................................................................GCGTCAAAATGACTGTGAGCC......................................................................................................................211111.001113010800000000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG.......................................................................242110.5022114115422371550000
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTA.....................................................................................................................221109.001091188022330000
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGT.........................................................................202102.50205099761021170000
.....................................................................................................................................A---CCC-CTGCTGTCTAGTAAC...........................................................................................................................................19198.009882351140200000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTT.......................................................................23290.001800177200000010
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA.......................................................................23289.5017901483100000000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTC.......................................................................24283.00166053781231370000
.......................................................................................................................................................................................................ATATCACAGCCATTTTGACGAGTT........................................................................24275.0015001355000000010
.............................................................................................................................................................................................................CAGCCATTTTGACGAGTT........................................................................18271.501430785932100000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGATC.........................................................................22266.0013200114101700000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAC..........................................................................21263.501274008201310000
...........................................................................................................................................................................................................CACAGCCATTTTGACGAGT.........................................................................19245.50910235823140000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTG........................................................................23242.0084111454131000000
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTATGA-.................................................................................................................25142.0042076000000029
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTAC....................................................................................................................23141.0041004100000000
............................................................................................................................................................GCGTCAAAATGACTGTGAGC.......................................................................................................................20139.0039082910100000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAA.......................................................................24232.006401731111130000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGC.........................................................................21231.0062135600200000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAA......................................................................24228.00560461000000000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTC........................................................................22227.5055064810000000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTT......................................................................25224.0048029405640000
.......................................................................................................................................................................................................ATATCACAGCCATTTTGACGAGT.........................................................................23223.5047033444200000
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTATGT-.................................................................................................................25122.0022012700120000
........................................................................................................................................................................................................TATCACAGCCATTTTGAC.............................................................................18221.50431123800100000
..............................................................................................................................................................GTCAAAATGACTGTGAGCTATG...................................................................................................................22121.0021014700000000
.......................................................................................................................................................................................................ATATCACAGCCATTTTGACGAG..........................................................................22217.00340910140100000
....................................................................................................................................TA---CCC-CTGCTGTCTAGTAAC...........................................................................................................................................20114.001416520000000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAT......................................................................25214.0028018351010000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAAA.....................................................................25211.0022020200000000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTG........................................................................22211.0022022000000000
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGTTA.......................................................................22210.5021091020000000
............................................................................................................................................................GCGTCAAAATGACTGTGAGCTATT...................................................................................................................24110.001001313200000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGA...........................................................................19210.0020019100000000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAA..........................................................................2128.001617132200000
droEre2
TTTG--------TCGTGCTA--C-----------------------GCAGTGAT----------A----------------------------GATT----------------------------CGTCGTTTAAACCCC-CTGCTGTCTATTAGCGCGTCAAAGTGACTGTGAACTATGT-GGAT----TTGAC-TTCATATCACAGCCATTTTGACGAGTTTGTTG-GGCAGCCC-----C-ATCATCG------TG---AAGT-GT--------------------------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGT.........................................................................222207052.00414104440434395277541888723598275583287
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTT........................................................................232132507.00265014996685397627535300309044056631847
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAG..........................................................................21213425.00268504433182130211254641869213
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT.......................................................................2424408.00881627903491057127102551240
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTT........................................................................2224128.5082577230437865365458
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA.......................................................................2423105.5062113292179722264356276204
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGC.........................................................................2222528.0050564243272560315701
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGT.........................................................................2121751.003502294728168252350
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTC........................................................................2321410.0028205522067182449515
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA......................................................................252985.5019711490271381412956
........................................................................................................................................................................................................TATCACAGCCATTTTGACGA...........................................................................202924.50184928659176134137319
............................................................................................................................................................GCGTCAAAGTGACTGTGAACTATG...................................................................................................................241601.006014722566111170
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTA........................................................................232473.009462371031311735063
............................................................................................................................................................................................................ACAGCCATTTTGACGAGT.........................................................................182397.5079591186190154840
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGA.........................................................................222369.50739116731526234860
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAAA.....................................................................262275.0055050826010114
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGTT........................................................................212256.00512331850682953
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGG.........................................................................222194.503892610491102471
........................................................................................................................................................................................................TATCACAGCCATTTTGACG............................................................................192194.003881141742223910
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG.......................................................................242182.0036417720712151267
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTG........................................................................232169.5033937513632390
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAGT.........................................................................202164.003281174511741440
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAG..........................................................................202146.5029327310000100
............................................................................................................................................................................................................ACAGCCATTTTGACGAGTT........................................................................192136.5027331173641377239
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTC.......................................................................242125.002501105533233224
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA.......................................................................232124.502492282001000
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTT.......................................................................232119.50239232410200
.......................................................................................................................................................................................................ATATCACAGCCATTTTGACGAGTT........................................................................24296.001927920002109
...........................................................................................................................................................................................................CACAGCCATTTTGACGAGTT........................................................................20291.5018360312291168
...........................................................................................................................................................................................................CACAGCCATTTTGACGAGT.........................................................................19281.501633438087760
...............................................................................................................................................................................................................GCCATTTTGACGAGTT........................................................................16280.00160000000160
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAT..........................................................................21276.001524863151790
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAA.......................................................................24262.5012547270414330
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAA......................................................................24255.00110109100000
.............................................................................................................................................................................................................CAGCCATTTTGACGAGTT........................................................................18252.00104277002662
.............................................................................................................................................................CGTCAAAGTGACTGTGAACTATG...................................................................................................................23150.005050000000
.......................................................................................................................................................................................................ATATCACAGCCATTTTGACGAGT.........................................................................23243.5087368041380
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTT......................................................................25239.50792932128160
.......................................................................................................................................................................................................ATATCACAGCCATTTTGACGAG..........................................................................22234.0068613091390
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAC..........................................................................21233.5067450010120
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGG.........................................................................21232.506565000000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAT......................................................................25226.5053260006417
........................................................................................................................................CCCC-CTGCTGTCTATTAGC...........................................................................................................................................19126.002618204110
................................................................................................................................................................................................................CCATTTTGACGAGTT........................................................................15226.005200000052
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAA..........................................................................21224.0048103020330
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAAA.....................................................................25220.504138000003
............................................................................................................................................................GCGTCAAAGTGACTGTGAACT......................................................................................................................21119.001913400011
............................................................................................................................................................GCGTCAAAGTGACTGTGAACTAT....................................................................................................................23119.001917100010
.........................................................................................................................................................................................................ATCACAGCCATTTTGACGAGC.........................................................................21217.003423200000
..............................................................................................................................................................................................................AGCCATTTTGACGAGTT........................................................................17215.503100000031
........................................................................................................................................................................................................TATCACAGCCATTTTGAC.............................................................................18215.503113801072
..........................................................................................................................................................................................................TCACAGCCATTTTGACGAG..........................................................................19214.502918301070
........................................................................................................................................................................................................TATCACAGCCATTTTGACGATC.........................................................................22213.502702502000
........................................................................................................................................................................................................TATCACAGCCATTTTGACGT...........................................................................20211.502331101440
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAAA......................................................................25311.333429201110
............................................................................................................................................................GCGTCAAAGTGACTGTGAACTATGT-GG...............................................................................................................27111.00119000110
........................................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTA......................................................................25210.00207302242

Generated: 10/20/2015 at 07:40 PM