dpe-mir-13b-1

Antisense to intron [Dper\GL24478-in]; pre_miRNA [Dper\mir-13b-1-RM]; utr3 [utr3_minus_7788]; miRNA [Dper\miR-13b-1-RA]

GGGGCAGGGCAGGATGGAGCACAGAGTGGACGGAAAGCATCTTTCTTATACCATGTCGTTAAAATGTTTGTGACCTTATGTACTCTTGAATCATATCACAGCCATTTTGACGAGTTTGGGTACAGAAATTTCAACATGAAATGCCCCCTTAACAATCCATTCTTTTCAG **************************************.(((((..((((...(((((((((((.((((((...((((...........)))))))))).))))))))))).....)))).)))))..*************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V057 head	M042 female body	V050 head	V042 embryo	V111 male body	M021 embryo
.............................................................................................TATCACAGCCATTTTGACGAGT......................................................	22	0	2	42942.50	85885	34867	13731	23317	9615	3996	359
.............................................................................................TATCACAGCCATTTTGACGAGTT.....................................................	23	0	2	29027.00	58054	19100	22277	9275	3839	3397	166
.............................................................................................TATCACAGCCATTTTGACGAG.......................................................	21	0	2	2419.00	4838	902	1838	920	956	112	110
.............................................................................................TATCACAGCCATTTTGACGAGTTT....................................................	24	0	2	1174.50	2349	986	618	297	77	371	0
.............................................................................................TATCACAGCCATTTTGACGAGTTA....................................................	24	1	2	1117.50	2235	205	1576	77	313	56	8
..............................................................................................ATCACAGCCATTTTGACGAGTT.....................................................	22	0	2	883.50	1767	54	1656	34	3	20	0
..............................................................................................ATCACAGCCATTTTGACGAGT......................................................	21	0	2	539.00	1078	34	1016	20	1	7	0
.............................................................................................TATCACAGCCATTTTGACGAGTTAA...................................................	25	2	2	447.00	894	28	706	6	141	9	4
.............................................................................................TATCACAGGCATTTTGACGAGTT.....................................................	23	1	2	400.50	801	14	787	0	0	0	0
.................................................................................................ACAGCCATTTTGACGAGT......................................................	18	0	2	380.50	761	402	5	240	111	2	1
.............................................................................................TATCACAGCCATTTTGACGAGC......................................................	22	1	2	287.00	574	368	18	164	13	5	6
.............................................................................................TATCACAGCCATTTTGACGA........................................................	20	0	2	277.50	555	83	244	74	128	10	16
.............................................................................................TATCACAGGCATTTTGACGAGT......................................................	22	1	2	260.50	521	19	494	4	4	0	0
.............................................................................................TATCACAGCCATTTTGACGCGT......................................................	22	1	2	232.00	464	256	1	134	73	0	0
.............................................................................................TATCACAGACATTTTGACGAGTT.....................................................	23	1	2	227.50	455	69	349	8	28	1	0
.............................................................................................TATCACAGACATTTTGACGAGT......................................................	22	1	2	199.00	398	118	232	16	29	3	0
.............................................................................................TAGCACAGCCATTTTGACGAGT......................................................	22	1	2	194.50	389	343	0	41	5	0	0
.................................................................................................ACAGCCATTTTGACGAGTT.....................................................	19	0	2	168.50	337	187	15	92	38	4	1
.............................................................................................TATCACAGCCATTTTGCCGAGT......................................................	22	1	2	154.50	309	202	0	95	12	0	0
.............................................................................................TATCACAGCCATTTTGACGCGTT.....................................................	23	1	2	145.50	291	189	1	69	30	2	0
.............................................................................................TATCACAGCCATTTTGACGAGA......................................................	22	1	2	135.50	271	78	100	73	18	1	1
.............................................................................................TATCACAGCCATTTTGACGTGT......................................................	22	1	2	120.00	240	190	2	21	27	0	0
.............................................................................................TATCACAGCCATTTTGACGAGCT.....................................................	23	1	2	110.50	221	148	19	43	6	4	1
.............................................................................................TATCACAGTCATTTTGACGAGTT.....................................................	23	1	2	106.50	213	38	167	5	2	1	0
.............................................................................................TATCACAGCCCTTTTGACGAGT......................................................	22	1	2	106.50	213	103	0	34	75	1	0
.............................................................................................TAGCACAGCCATTTTGACGAGTT.....................................................	23	1	2	100.50	201	185	1	10	5	0	0
.............................................................................................TATCACAGCCATTTTGACGAGG......................................................	22	1	2	99.00	198	101	36	20	16	1	24
.............................................................................................TATCACAGTCATTTTGACGAGT......................................................	22	1	2	91.50	183	47	109	14	11	2	0
.............................................................................................TATCACAGCCATTTTTACGAGT......................................................	22	1	2	85.50	171	116	2	35	13	5	0
.............................................................................................TATCACAGCCATTTTGACGAGTA.....................................................	23	1	2	83.00	166	45	69	24	25	3	0
.............................................................................................TATCACAGCCAGTTTGACGAGT......................................................	22	1	2	82.50	165	143	0	19	3	0	0
.............................................................................................TATCACAGCCATTTTGCCGAGTT.....................................................	23	1	2	79.50	159	119	0	32	8	0	0
.............................................................................................TATCACAGCCATTTTGACGTGTT.....................................................	23	1	2	75.00	150	128	1	9	11	1	0
.............................................................................................TATCACAGCCATTTTCACGAGT......................................................	22	1	2	74.50	149	113	1	26	8	1	0
.............................................................................................TATCACAGCCGTTTTGACGAGT......................................................	22	1	2	73.50	147	102	4	24	12	5	0
.............................................................................................TATCACAGCCATTTTGACTAGT......................................................	22	1	2	73.00	146	87	8	33	6	4	8
.............................................................................................TATCACAGCCATTTTGACGAGTTG....................................................	24	1	2	71.50	143	11	82	9	28	0	13
.............................................................................................TATCACAGCCATTTTGACG.........................................................	19	0	2	66.50	133	21	77	14	9	0	12
.............................................................................................TATCACAGCCATTTTGACGAGGT.....................................................	23	1	2	65.50	131	36	79	7	9	0	0
.............................................................................................TATCACAGCCATTTTGACGAGTTC....................................................	24	1	2	65.00	130	26	26	18	2	57	1
.............................................................................................TATCACAGCCATTTTGACGATT......................................................	22	1	2	64.50	129	90	5	28	5	1	0
..............................................................................................ATCACAGCCATTTTGACGAG.......................................................	20	0	2	61.50	123	0	123	0	0	0	0
.............................................................................................TATCACAGCCATTTTGTCGAGT......................................................	22	1	2	61.50	123	90	0	16	14	3	0
.............................................................................................TATCAGAGCCATTTTGACGAGT......................................................	22	1	2	60.00	120	36	0	82	2	0	0
.............................................................................................TATCACAGCCATTTTAACGAGT......................................................	22	1	2	57.50	115	65	3	38	7	2	0
.............................................................................................TATCACAGCCATTTTGACAAGT......................................................	22	1	2	56.00	112	37	2	59	12	2	0
.............................................................................................TATCACAGCCATTTTGACGGGT......................................................	22	1	2	56.00	112	72	4	25	7	4	0
.............................................................................................TATCACAGCCACTTTGACGAGT......................................................	22	1	2	55.50	111	65	4	27	13	2	0
.............................................................................................TATCGCAGCCATTTTGACGAGT......................................................	22	1	2	54.00	108	51	8	33	9	6	1
............................................................................................CTATCACAGCCATTTTGACGAGT......................................................	23	1	2	53.00	106	41	31	22	11	1	0
.............................................................................................GATCACAGCCATTTTGACGAGT......................................................	22	1	2	53.00	106	33	49	7	14	3	0
.............................................................................................TATAACAGCCATTTTGACGAGT......................................................	22	1	2	53.00	106	85	0	8	12	1	0
..............................................................................................ATCACAGCCATTTTGACGAGTTA....................................................	23	1	2	51.50	103	0	101	0	2	0	0
.............................................................................................TATCACAGCCATTTTGGCGAGT......................................................	22	1	2	51.50	103	66	1	19	15	2	0
.............................................................................................TATCACAGCCCTTTTGACGAGTT.....................................................	23	1	2	50.00	100	48	1	17	33	1	0
.............................................................................................TATCACAGCCATTTTGTCGAGTT.....................................................	23	1	2	50.00	100	82	1	11	6	0	0
...............................................................................................TCACAGCCATTTTGACGAGTT.....................................................	21	0	2	49.50	99	2	86	6	0	5	0
............................................................................................CTATCACAGCCATTTTGACGAGTT.....................................................	24	1	2	48.00	96	22	59	10	4	1	0
.............................................................................................TATCACAGCCAGTTTGACGAGTT.....................................................	23	1	2	44.00	88	72	1	10	5	0	0
.............................................................................................TATCACAGGCATTTTGACGAG.......................................................	21	1	2	44.00	88	2	85	0	1	0	0
.............................................................................................TATCACAGCCATTTTTACGAGTT.....................................................	23	1	2	43.00	86	67	3	11	4	1	0
.............................................................................................TATCAAAGCCATTTTGACGAGT......................................................	22	1	2	42.50	85	38	1	43	3	0	0
.............................................................................................TATCACAGCCTTTTTGACGAGT......................................................	22	1	2	42.50	85	63	1	15	6	0	0
.............................................................................................CATCACAGCCATTTTGACGAGT......................................................	22	1	2	42.50	85	50	9	18	6	2	0
.............................................................................................GATCACAGCCATTTTGACGAGTT.....................................................	23	1	2	42.50	85	18	61	1	5	0	0
.............................................................................................TATCACAGCCATTTCGACGAGT......................................................	22	1	2	41.50	83	46	2	29	4	2	0
.............................................................................................TACCACAGCCATTTTGACGAGT......................................................	22	1	2	40.00	80	46	1	22	9	2	0
.......................................................TCGTTAAAATGTTTGTGACCTTATG.........................................................................................	25	0	1	40.00	40	3	1	4	10	0	22
.............................................................................................TATCACAGCAATTTTGACGAGT......................................................	22	1	2	40.00	80	57	1	12	9	1	0
.............................................................................................TATCACAGCCGTTTTGACGAGTT.....................................................	23	1	2	39.50	79	55	1	16	6	1	0
.............................................................................................TATCACAGCCATTTTGACGAGTC.....................................................	23	1	2	39.00	78	50	6	11	4	6	1
.............................................................................................TATCACAGCCATTTTGACGATTT.....................................................	23	1	2	38.00	76	38	25	9	1	3	0
.............................................................................................TATCACAGCCATTTTCACGAGTT.....................................................	23	1	2	38.00	76	54	3	16	3	0	0
.............................................................................................TATCACATCCATTTTGACGAGT......................................................	22	1	2	38.00	76	41	3	16	6	8	2
.............................................................................................TATCACGGCCATTTTGACGAGT......................................................	22	1	2	37.50	75	45	4	16	8	2	0
.............................................................................................TATCACAGCCATTTTGACGACT......................................................	22	1	2	37.50	75	58	4	12	1	0	0
.............................................................................................TATCACAGCCATGTTGACGAGT......................................................	22	1	2	37.00	74	61	3	6	1	0	3
.............................................................................................TATCACACCCATTTTGACGAGT......................................................	22	1	2	36.00	72	43	6	15	5	2	1
.............................................................................................AATCACAGCCATTTTGACGAGT......................................................	22	1	2	36.00	72	45	10	11	5	1	0
.............................................................................................TATCACAGCCATTTTGACGGGTT.....................................................	23	1	2	35.50	71	39	15	10	5	2	0
.............................................................................................TATCACAGCCATTTTGGCGAGTT.....................................................	23	1	2	35.00	70	49	5	7	6	3	0
.............................................................................................TATCACAGCCATTTTGACTAGTT.....................................................	23	1	2	34.50	69	43	13	8	2	2	1
.............................................................................................TATCACAGCCATTTTGACGAGTAA....................................................	24	2	2	34.00	68	11	39	3	13	2	0
.............................................................................................TATCACAGCCATTCTGACGAGT......................................................	22	1	2	34.00	68	47	1	14	4	2	0
.............................................................................................TATCATAGCCATTTTGACGAGT......................................................	22	1	2	34.00	68	16	2	41	8	1	0
.............................................................................................TATCACAGCCATTTTGACGAGAT.....................................................	23	1	2	33.50	67	24	22	13	8	0	0
.............................................................................................TATCACAGCCATCTTGACGAGT......................................................	22	1	2	33.50	67	39	2	20	2	4	0
.............................................................................................TATCACAGCCATTGTGACGAGT......................................................	22	1	2	33.50	67	52	1	6	8	0	0
..............................................................................................ATCACAGCGATTTTGACGAGTT.....................................................	22	1	2	33.00	66	0	66	0	0	0	0
.............................................................................................TATCACACCCATTTTGACGAGTT.....................................................	23	1	2	32.50	65	34	19	8	3	1	0
...............................................................................................TCACAGCCATTTTGACGAGT......................................................	20	0	2	32.00	64	8	41	8	6	1	0
.............................................................................................TAACACAGCCATTTTGACGAGT......................................................	22	1	2	31.50	63	51	0	6	5	1	0
.............................................................................................CATCACAGCCATTTTGACGAGTT.....................................................	23	1	2	30.50	61	23	14	16	3	5	0
.............................................................................................TATCACAGCCACTTTGACGAGTT.....................................................	23	1	2	30.50	61	38	6	10	3	3	1
..............................................................................................ATCACAGCCATTTTGACGAGTTAA...................................................	24	2	2	29.00	58	0	58	0	0	0	0
.............................................................................................TATCACAGCCATTTTGCCGCGT......................................................	22	2	2	28.50	57	43	0	12	2	0	0
.............................................................................................TATCACAGCTATTTTGACGAGT......................................................	22	1	2	28.50	57	33	2	20	2	0	0
.............................................................................................TATCGCAGCCATTTTGACGAGTT.....................................................	23	1	2	28.00	56	28	11	7	6	4	0
.............................................................................................TATCACAGCCATTTTGAC..........................................................	18	0	2	27.50	55	6	9	0	1	0	39
.............................................................................................TATCACAGCCATTTTGACCAGT......................................................	22	1	2	27.00	54	35	3	13	2	1	0
.............................................................................................TATCACAACCATTTTGACGAGT......................................................	22	1	2	27.00	54	32	4	13	5	0	0
.............................................................................................TATCAGAGCCATTTTGACGAGTT.....................................................	23	1	2	27.00	54	23	2	27	2	0	0
..............................................................................................ATCACAGCCATTTTGACGAGTTT....................................................	23	0	2	26.50	53	1	48	0	0	4	0
.............................................................................................TATCACAGGCATTTTGACGAGTTA....................................................	24	2	2	26.50	53	0	53	0	0	0	0
.............................................................................................TGTCACAGCCATTTTGACGAGT......................................................	22	1	2	24.00	48	32	0	12	3	1	0
.............................................................................................TATCACAGCCATTTTGACAAGTT.....................................................	23	1	2	24.00	48	15	3	20	8	1	1
.............................................................................................TATCACGGCCATTTTGACGAGTT.....................................................	23	1	2	24.00	48	30	5	8	4	1	0
.............................................................................................TATCACAGCCATTTTAACGAGTT.....................................................	23	1	2	24.00	48	27	3	12	6	0	0
.............................................................................................AATCACAGCCATTTTGACGAGTT.....................................................	23	1	2	23.50	47	17	24	1	1	4	0
.............................................................................................TATCACAGCAATTTTGACGAGTT.....................................................	23	1	2	23.50	47	30	0	10	5	2	0
.............................................................................................TATCACAGCCATCTTGACGAGTT.....................................................	23	1	2	23.00	46	31	3	8	2	1	1
.............................................................................................TACCACAGCCATTTTGACGAGTT.....................................................	23	1	2	22.00	44	24	6	7	5	2	0
.............................................................................................TATAACAGCCATTTTGACGAGTT.....................................................	23	1	2	22.00	44	35	1	8	0	0	0
.............................................................................................TATCATAGCCATTTTGACGAGTT.....................................................	23	1	2	22.00	44	14	5	21	3	1	0
.............................................................................................TATCACAGCCATTTTGAAGAGT......................................................	22	1	3	21.33	64	35	0	18	11	0	0
.............................................................................................TATCAAAGCCATTTTGACGAGTT.....................................................	23	1	2	21.00	42	26	0	14	2	0	0
.............................................................................................TATCACATCCATTTTGACGAGTT.....................................................	23	1	2	21.00	42	16	7	8	1	10	0
.............................................................................................TATCACAGCCATTTGGACGAGT......................................................	22	1	2	20.50	41	34	0	5	2	0	0
.............................................................................................TATCACAGCCATTTTGACGACTT.....................................................	23	1	2	20.50	41	32	4	4	1	0	0
.............................................................................................TAGCACAGCCGTTTTGACGAGT......................................................	22	2	2	20.00	40	37	0	3	0	0	0
.............................................................................................TATCACAGACATTTTGACGAG.......................................................	21	1	2	20.00	40	0	34	1	5	0	0
.............................................................................................TATCACAGCCTTTTTGACGAGTT.....................................................	23	1	2	20.00	40	34	3	0	3	0	0
.............................................................................................TATCACAGCCATTTTGACGAAT......................................................	22	1	2	20.00	40	11	3	19	7	0	0
.............................................................................................TATTACAGCCATTTTGACGAGT......................................................	22	1	2	20.00	40	20	2	15	3	0	0
..............................................................................................ATCACAGCGATTTTGACGAGT......................................................	21	1	2	19.50	39	0	39	0	0	0	0
.............................................................................................TATCACAGCCATTTTGCCGAGC......................................................	22	2	2	18.50	37	25	0	12	0	0	0
.............................................................................................TAGCACAGCCATTTTCACGAGT......................................................	22	2	2	18.00	36	32	0	4	0	0	0
.............................................................................................TATCACAGCCATTTCGACGAGTT.....................................................	23	1	2	17.50	35	22	3	6	3	1	0
.............................................................................................TATCACAGCCATTTTGCCGCGTT.....................................................	23	2	2	17.50	35	28	0	6	1	0	0
.............................................................................................TATCACAGCCATTTTGACGCGC......................................................	22	2	2	17.50	35	19	0	14	2	0	0
.............................................................................................TATCACAGCTATTTTGACGAGTT.....................................................	23	1	2	17.00	34	21	2	7	2	2	0
.............................................................................................TATGACAGCCATTTTGACGAGT......................................................	22	1	2	16.50	33	30	0	1	1	1	0
.............................................................................................TAGCACAGCCATTTTGACGAGC......................................................	22	2	2	16.50	33	32	0	1	0	0	0
.............................................................................................TATCCCAGCCATTTTGACGAGT......................................................	22	1	2	16.50	33	26	0	2	5	0	0
.............................................................................................TAACACAGCCATTTTGACGAGTT.....................................................	23	1	2	16.00	32	24	3	2	3	0	0
.............................................................................................TATCACAGACATTTTGACGAGTTA....................................................	24	2	2	16.00	32	1	31	0	0	0	0
..............................................................................................ATCACAGCAATTTTGACGAGTT.....................................................	22	1	2	15.50	31	0	31	0	0	0	0
................................................................................................CACAGCCATTTTGACGAGT......................................................	19	0	2	15.50	31	3	14	4	5	5	0
.............................................................................................TATCACCGCCATTTTGACGAGT......................................................	22	1	2	15.50	31	20	0	6	5	0	0
.............................................................................................TCTCACAGCCATTTTGACGAGT......................................................	22	1	2	15.50	31	25	0	3	2	1	0
.............................................................................................TGTCACAGCCATTTTGACGAGTT.....................................................	23	1	2	15.50	31	22	1	8	0	0	0
.............................................................................................TATCACAGCCATTATGACGAGT......................................................	22	1	2	15.00	30	22	0	7	1	0	0
.............................................................................................TATCACAGCCATGTTGACGAGTT.....................................................	23	1	2	14.00	28	25	2	1	0	0	0
.............................................................................................TATCACAGCCATTTTGACGCG.......................................................	21	1	2	14.00	28	15	0	2	11	0	0
.............................................................................................TATTACAGCCATTTTGACGAGTT.....................................................	23	1	2	14.00	28	15	4	4	2	3	0
.............................................................................................TATAACAGCCATTTTGACGAGC......................................................	22	2	2	13.50	27	21	0	6	0	0	0
.............................................................................................TATCACTGCCATTTTGACGAGT......................................................	22	1	2	13.50	27	10	1	10	2	4	0
.............................................................................................TAGCACAGCCATTGTGACGAGT......................................................	22	2	2	13.50	27	25	0	2	0	0	0
.............................................................................................TATCACAGCCATTCTGACGAGTT.....................................................	23	1	2	12.50	25	15	4	3	2	1	0
.............................................................................................TATCACCGCCATTTTGACGAGTT.....................................................	23	1	2	12.50	25	22	0	2	1	0	0
.............................................................................................TATCACAACCATTTTGACGAGTT.....................................................	23	1	2	12.50	25	17	2	1	2	3	0
.............................................................................................TAGCACAGCCATTTTGACGTGT......................................................	22	2	2	12.00	24	21	0	2	1	0	0
.............................................................................................TATCACAGTCATTTTGACGAG.......................................................	21	1	2	12.00	24	1	21	1	0	0	1
.............................................................................................TATCACAGCCATTTTGACCAGTT.....................................................	23	1	2	12.00	24	12	3	6	3	0	0
............................................................................................ATATCACAGCCATTTTGACGAGT......................................................	23	0	2	12.00	24	4	12	4	2	2	0
.............................................................................................TATCACAGGCATTTTGACGAGTTAA...................................................	25	3	2	12.00	24	0	24	0	0	0	0
.............................................................................................TATCACAGCCATTTTGACGAGTTTT...................................................	25	1	2	11.50	23	6	8	3	0	6	0
.............................................................................................TATCACAGCCAGTTTGACGAGG......................................................	22	2	2	11.50	23	20	0	3	0	0	0
.............................................................................................TATCACAGGCATTTTGACGAGTTT....................................................	24	1	2	11.50	23	1	22	0	0	0	0
.............................................................................................TATCACAGCGATTTTGACGAGT......................................................	22	1	2	11.50	23	14	0	6	2	1	0
..............................................................................................ATCACAGCAATTTTGACGAGT......................................................	21	1	2	11.50	23	0	23	0	0	0	0
.............................................................................................TAGCACAGCCATTTTGACGTGTT.....................................................	23	2	2	11.50	23	22	0	0	1	0	0
.............................................................................................TATCACAGCCATTTTGAAGAGTT.....................................................	23	1	3	11.00	33	18	3	10	2	0	0
.............................................................................................TATCACAGCCATTTTGACGAATT.....................................................	23	1	2	11.00	22	7	3	9	3	0	0
............................................................................................TTATCACAGCCATTTTGACGAGTT.....................................................	24	1	2	11.00	22	0	22	0	0	0	0
.............................................................................................TAGCACAGCCAGTTTGACGAGT......................................................	22	2	2	11.00	22	21	0	1	0	0	0
.............................................................................................TATCACAGCCATTGTGACGAGTT.....................................................	23	1	2	11.00	22	19	0	2	1	0	0
.............................................................................................TAGCACAGCCATTTTGACGAGCT.....................................................	23	2	2	11.00	22	21	0	0	1	0	0
.............................................................................................TATCACAGCCATTGTGACGAGC......................................................	22	2	2	11.00	22	18	0	4	0	0	0
.............................................................................................TATCACAGCGATTTTGACGAGTT.....................................................	23	1	2	10.50	21	19	0	1	1	0	0
.............................................................................................TATCACAGCCCTTTTGACGCGT......................................................	22	2	2	10.50	21	12	0	4	5	0	0
.............................................................................................TATCTCAGCCATTTTGACGAGT......................................................	22	1	2	10.00	20	11	1	5	3	0	0
.............................................................................................TATCCCAGCCATTTTGACGAGTT.....................................................	23	1	2	10.00	20	18	1	1	0	0	0
................................................................................................CACAGCCATTTTGACGAGTT.....................................................	20	0	2	10.00	20	0	9	3	3	5	0
.............................................................................................TAGCACAGCCATTTTGTCGAGT......................................................	22	2	2	9.50	19	13	0	3	3	0	0
.............................................................................................TATCACAGCCATTTTGACTAG.......................................................	21	1	2	9.50	19	6	1	3	2	0	7
.............................................................................................TATCACAGCCATTTTGACGTG.......................................................	21	1	2	9.50	19	15	0	1	3	0	0
.............................................................................................TATCACAGCCATTTTGACGCGCT.....................................................	23	2	2	9.50	19	13	0	6	0	0	0
.............................................................................................TATCACAGCCATTTTCACGAGC......................................................	22	2	2	9.50	19	12	0	7	0	0	0
.............................................................................................TATCACTGCCATTTTGACGAGTT.....................................................	23	1	2	9.50	19	11	3	4	1	0	0
.............................................................................................TATCACAGACATTTTGACGAGTTT....................................................	24	1	2	9.50	19	7	12	0	0	0	0
.............................................................................................TATCACAGCCATTTTGAGGAGTT.....................................................	23	1	3	9.33	28	15	0	7	3	3	0
.............................................................................................TATCACAGGCATTTTGACGAGC......................................................	22	2	2	9.00	18	4	13	1	0	0	0
.............................................................................................TATCACAGCCATTTTGACGAGTAAA...................................................	25	3	2	9.00	18	1	16	0	1	0	0
.................................................................................................ACAGCCATTTTGACGAGTTT....................................................	20	0	2	9.00	18	12	1	5	0	0	0
............................................................................................ATATCACAGCCATTTTGACGAGTT.....................................................	24	0	2	9.00	18	1	17	0	0	0	0
.............................................................................................TATCACAGCCATTTTGAGGAGT......................................................	22	1	3	9.00	27	19	0	8	0	0	0
.............................................................................................TATGACAGCCATTTTGACGAGTT.....................................................	23	1	2	8.50	17	13	1	1	1	1	0
.............................................................................................TATCACAGTCATTTTGACGAGTTA....................................................	24	2	2	8.50	17	0	16	0	1	0	0
............................................................................................GTATCACAGCCATTTTGACGAGTT.....................................................	24	1	2	8.50	17	0	17	0	0	0	0
.............................................................................................TATCACAGCCATTTTGACGCTT......................................................	22	2	2	8.50	17	14	0	3	0	0	0
.............................................................................................TAGCACAGACATTTTGACGAGT......................................................	22	2	2	8.50	17	15	0	1	1	0	0
.............................................................................................TATCACAGCCAGGTTGACGAGT......................................................	22	2	2	8.50	17	13	0	3	1	0	0
.......................................................TCGTTAAAATGTTTGTGACCT.............................................................................................	21	0	1	8.00	8	0	1	0	1	0	6
.............................................................................................TATCACAGCCATTTTGTCGTGT......................................................	22	2	2	8.00	16	10	0	5	1	0	0
.............................................................................................TATCACAGTCATTTTGACGTGT......................................................	22	2	2	8.00	16	14	0	0	2	0	0
.............................................................................................TATCACAGGCATTTTGACGAGCT.....................................................	23	2	2	8.00	16	0	16	0	0	0	0
.......................................................TCGTTAAAATGTTTGTGACC..............................................................................................	20	0	1	8.00	8	0	0	0	0	0	8
.............................................................................................TATCACAGCCATTTTTACTAGT......................................................	22	2	2	8.00	16	12	0	3	1	0	0
.............................................................................................TATCACAGCCATTTTGCCGAGCT.....................................................	23	2	2	7.50	15	14	0	1	0	0	0
.............................................................................................TATCACAGCCATTTTGACGATC......................................................	22	2	2	7.50	15	12	1	2	0	0	0
............................................................................................GTATCACAGCCATTTTGACGAGT......................................................	23	1	2	7.50	15	0	15	0	0	0	0
.............................................................................................TAGCACAGCCGTTTTGTCGAGT......................................................	22	3	2	7.50	15	14	0	1	0	0	0
.............................................................................................TCTCACAGCCATTTTGACGAGTT.....................................................	23	1	2	7.50	15	9	0	3	3	0	0
.............................................................................................TAGCACAGCCATTTTGACGAGG......................................................	22	2	2	7.50	15	13	0	2	0	0	0
.............................................................................................TAGCACAGCCGTTTTGACGAGTT.....................................................	23	2	2	7.50	15	14	0	1	0	0	0
.............................................................................................TATCACAGCCATATTGACGAGT......................................................	22	1	2	7.50	15	9	3	3	0	0	0
.............................................................................................TATCACAGCCCTTTTGCCGAGT......................................................	22	2	2	7.00	14	10	0	2	2	0	0
..............................................................................................ATCACAGCCATTTTGACGA........................................................	19	0	2	7.00	14	0	14	0	0	0	0
.............................................................................................TATCACAGACATTTTGACGAGTTAA...................................................	25	3	2	7.00	14	1	12	0	1	0	0
............................................................................................CTATCACAGCCATTTTGACGAG.......................................................	22	1	2	7.00	14	1	8	1	4	0	0
.............................................................................................TATCACAGCCATTTTGACGAGTG.....................................................	23	1	2	6.50	13	10	2	0	0	1	0
.............................................................................................TATCACAGCCATTTTGACGAGTTAG...................................................	25	1	2	6.50	13	0	8	1	4	0	0
.............................................................................................TATCACAGCCATTTTGTCGTGTT.....................................................	23	2	2	6.50	13	9	0	3	1	0	0
.............................................................................................TATCACAGCCATTTTGACGCGTTT....................................................	24	1	2	6.50	13	9	0	3	1	0	0
.............................................................................................TATCACAGCCATTTTGACGAA.......................................................	21	1	2	6.50	13	6	5	1	1	0	0
.............................................................................................TATCTCAGCCATTTTGACGAGTT.....................................................	23	1	2	6.50	13	7	1	3	2	0	0
.............................................................................................TATCACAGGCATTTTGACGA........................................................	20	1	2	6.00	12	1	11	0	0	0	0
.............................................................................................TATCACAGCCAGTTTGACGAGGT.....................................................	23	2	2	6.00	12	12	0	0	0	0	0
.............................................................................................TAGCACAGCCATTTTGACGCGT......................................................	22	2	2	6.00	12	12	0	0	0	0	0
.............................................................................................TATCACAGCCATTTAGACGAGT......................................................	22	1	2	6.00	12	7	0	5	0	0	0
.............................................................................................TATCACAGCCATTTTTACGAGC......................................................	22	2	2	6.00	12	8	0	4	0	0	0
..............................................................................................ATCACAGCTATTTTGACGAGTT.....................................................	22	1	2	6.00	12	0	12	0	0	0	0
.............................................................................................TATCACAGGCATTTTGACGAGG......................................................	22	2	2	6.00	12	0	12	0	0	0	0
.............................................................................................TATCACCGCCATTTTGACGCGT......................................................	22	2	2	6.00	12	10	0	1	1	0	0
.............................................................................................TAGCAGAGCCATTTTGACGAGT......................................................	22	2	2	6.00	12	12	0	0	0	0	0
..................................................................................................CAGCCATTTTGACGAGTT.....................................................	18	0	2	6.00	12	0	9	1	2	0	0
.............................................................................................TATCACAGCCATGTTGACGTGTT.....................................................	23	2	2	6.00	12	9	0	3	0	0	0
.............................................................................................TATCACAGCCACTTTGACGAGC......................................................	22	2	2	6.00	12	10	0	2	0	0	0
.............................................................................................TAGCACAGCCATTTTGACGAGTTT....................................................	24	1	2	6.00	12	10	0	2	0	0	0
.............................................................................................TATCACAGCCATTTTGACGCTTT.....................................................	23	2	2	6.00	12	11	0	1	0	0	0
.............................................................................................TATCACAGCCAGCTTGAGGAG.......................................................	21	3	10	5.80	58	11	14	19	2	12	0
.............................................................................................TATCACAGCCATTTTGACCAGC......................................................	22	2	2	5.50	11	10	0	1	0	0	0
............................................................................................ATATCACAGCCATTTTGACGAG.......................................................	22	0	2	5.50	11	1	2	1	7	0	0
.............................................................................................TATCACAGCCGTTTTGTCGAGT......................................................	22	2	2	5.50	11	10	0	1	0	0	0
.............................................................................................TATCACAGCCATTTTGCCGAG.......................................................	21	1	2	5.50	11	5	0	5	1	0	0
.............................................................................................TATCACAGCCATTTTGCCGCTT......................................................	22	3	2	5.50	11	9	0	2	0	0	0
.............................................................................................TATCACTGCCATTTTGACGTGTT.....................................................	23	2	2	5.50	11	10	0	1	0	0	0
.............................................................................................TATCACAGCCATTTTGCCGCGC......................................................	22	3	2	5.50	11	7	0	4	0	0	0
.............................................................................................TATCACAGCCAGTTTGACGTGT......................................................	22	2	2	5.50	11	10	0	1	0	0	0
.............................................................................................TATCACAGCCAGGTTGACGTGT......................................................	22	3	2	5.50	11	10	0	1	0	0	0
.............................................................................................TATCACAGCCCTTTTGACGAG.......................................................	21	1	2	5.50	11	2	0	0	9	0	0
.............................................................................................TATCACAGCCAGGTTGACGAGTT.....................................................	23	2	2	5.50	11	10	0	1	0	0	0
.............................................................................................TATCACAGTCATTTTGACGAGTTT....................................................	24	1	2	5.50	11	3	8	0	0	0	0
.............................................................................................TATCACAGGCATTTTGACGAGGT.....................................................	23	2	2	5.50	11	0	11	0	0	0	0
.................................................................................................ACAGCCATTTTGACGAGC......................................................	18	1	2	5.50	11	5	0	5	1	0	0
............................................................................................TTATCACAGCCATTTTGACGAGT......................................................	23	1	2	5.50	11	0	10	1	0	0	0
.............................................................................................TAGCACAGCCATTTTGTCGAGTT.....................................................	23	2	2	5.50	11	9	0	1	1	0	0
.............................................................................................TAGCACAGCCATTTTCACGAGTT.....................................................	23	2	2	5.50	11	10	0	1	0	0	0
.............................................................................................TATCACAGCCGTTTTGACGTGT......................................................	22	2	2	5.50	11	8	0	1	2	0	0
.............................................................................................TATCACAGCCATTTTAACGTGTT.....................................................	23	2	2	5.50	11	10	0	1	0	0	0
.............................................................................................TATCACAGCCATTTTCACGTGT......................................................	22	2	2	5.00	10	8	0	2	0	0	0
.............................................................................................TATCACAGCCAGTTTGACGTGTT.....................................................	23	2	2	5.00	10	10	0	0	0	0	0
.............................................................................................TATCACAGCCATTTTGACGAGTTTG...................................................	25	0	2	5.00	10	2	2	0	1	5	0
.............................................................................................TATCACAGCCATTTTGACTCGT......................................................	22	2	2	5.00	10	9	0	0	1	0	0
.............................................................................................TATCACAGCCAATTTGACGAGT......................................................	22	1	2	5.00	10	7	1	1	1	0	0
.............................................................................................TAACACAGCCATTTTAACGAGTT.....................................................	23	2	2	5.00	10	9	0	1	0	0	0
.............................................................................................TAGCACAGCCATTTTGACGAG.......................................................	21	1	2	5.00	10	5	0	4	1	0	0
.............................................................................................TATCACAGCCATTTAGACGAGTT.....................................................	23	1	2	5.00	10	7	1	0	1	1	0
.............................................................................................TATCACAGCCAGTTTGACGAGCT.....................................................	23	2	2	5.00	10	9	0	1	0	0	0
.............................................................................................TATCACAGCCATTTTGTCGATT......................................................	22	2	2	5.00	10	9	0	1	0	0	0
.............................................................................................TATCACAGCCATTTTGACGACC......................................................	22	2	2	5.00	10	9	0	1	0	0	0
.............................................................................................TATCACAGTCTTTTTGACGAGT......................................................	22	2	2	5.00	10	7	0	2	1	0	0
.............................................................................................TAGCACAGCCATTTTTACGAGT......................................................	22	2	2	5.00	10	10	0	0	0	0	0
.............................................................................................TATCACAGACATTTTGACGAGGT.....................................................	23	2	2	5.00	10	1	8	0	1	0	0
.............................................................................................TATCACAGCCTTTTTGCCGAGT......................................................	22	2	2	5.00	10	9	0	1	0	0	0
.............................................................................................TATCACAGCCATTATGACGAGTT.....................................................	23	1	2	5.00	10	6	1	3	0	0	0
.............................................................................................TATCACAGACATTTTGACGAGC......................................................	22	2	2	5.00	10	7	3	0	0	0	0
.............................................................................................TATCACAGCCATTTTGACCAG.......................................................	21	1	2	5.00	10	3	0	3	4	0	0
..............................................................................................ATCACAGCTATTTTGACGAGT......................................................	21	1	2	4.50	9	0	9	0	0	0	0
.............................................................................................TATCACAGCCAGTTTGGCGAGG......................................................	22	3	2	4.50	9	7	0	2	0	0	0
.............................................................................................TATCACAGCCATTTTTACGCGTT.....................................................	23	2	2	4.50	9	7	0	2	0	0	0
.............................................................................................TAGCACAGCCATTGTGACGAGTT.....................................................	23	2	2	4.50	9	9	0	0	0	0	0
.............................................................................................TATCACAGCCATTTTTACGAGG......................................................	22	2	2	4.50	9	7	0	2	0	0	0
.............................................................................................TATCACAGCCAGTTTGACGAGC......................................................	22	2	2	4.50	9	7	0	2	0	0	0
.............................................................................................TAGCACAGCCATTGTGACGAGC......................................................	22	3	2	4.50	9	8	0	1	0	0	0
.............................................................................................TTTCACAGCCATTTTGACGAGT......................................................	22	1	2	4.50	9	6	0	1	1	1	0
.............................................................................................TATCACAGCCATTTTCACGTGTT.....................................................	23	2	2	4.50	9	7	0	2	0	0	0
.............................................................................................TATCACAGCCATTTTGACGT........................................................	20	1	2	4.50	9	6	1	0	0	2	0
.............................................................................................TAGCACAGGCATTTTGACGAGTT.....................................................	23	2	2	4.50	9	9	0	0	0	0	0
.............................................................................................TAGCACAGCCGTTTTCACGAGT......................................................	22	3	2	4.50	9	8	0	1	0	0	0
.............................................................................................TATCACAGCCAGTTTGACGCGT......................................................	22	2	2	4.50	9	8	0	1	0	0	0
.............................................................................................TAACACAGCCATTTTGACGTGT......................................................	22	2	2	4.50	9	9	0	0	0	0	0
.............................................................................................TATCACAGCCAATTTGACGAGTT.....................................................	23	1	2	4.50	9	5	2	1	1	0	0
.............................................................................................TATCACAGGCATTTTGACGAGA......................................................	22	2	2	4.50	9	0	9	0	0	0	0
.............................................................................................TATCACAGCCATTTTGACGAGTCT....................................................	24	1	2	4.50	9	4	1	1	0	3	0
.............................................................................................GATCACAGCCATTTTGACGAGTTA....................................................	24	2	2	4.50	9	0	9	0	0	0	0
.............................................................................................TAGCACAGCCATTTTGACGCGTT.....................................................	23	2	2	4.50	9	9	0	0	0	0	0
.............................................................................................TATCACAGCCATTTTTACGAGCT.....................................................	23	2	2	4.50	9	8	0	1	0	0	0
.............................................................................................TATCACAGCCATTTTGAAGAGC......................................................	22	2	3	4.33	13	7	0	5	1	0	0
.............................................................................................TAGCACAGCCATGTTGACGAGT......................................................	22	2	2	4.00	8	7	0	1	0	0	0
.............................................................................................TATCACAGACATTGTGACGAGT......................................................	22	2	2	4.00	8	6	0	0	2	0	0
.............................................................................................TATCACAGCCATTTTGACGAGTTTA...................................................	25	1	2	4.00	8	1	4	1	1	1	0
.............................................................................................TAGCACAGCCATTTTGACGAGGT.....................................................	23	2	2	4.00	8	7	0	1	0	0	0
.............................................................................................TAGCACAGCCATTTTGTCGTGTT.....................................................	23	3	2	4.00	8	8	0	0	0	0	0
.............................................................................................TATTACAGCCAGTTTGACGAGT......................................................	22	2	2	4.00	8	8	0	0	0	0	0
.............................................................................................TATCACAGCCATTGTGACGAGCT.....................................................	23	2	2	4.00	8	7	0	1	0	0	0
.............................................................................................TATCACAGCCATTTTAACGTGT......................................................	22	2	2	4.00	8	7	0	1	0	0	0
.............................................................................................TATCACAGCCATTTTGACTTGTT.....................................................	23	2	2	4.00	8	6	0	2	0	0	0
.............................................................................................TATCACAGCCATTTTGACTATT......................................................	22	2	2	4.00	8	5	0	3	0	0	0
.............................................................................................TATCACAGCCATTTTTACGCGT......................................................	22	2	2	4.00	8	5	0	2	1	0	0

CCCCGTCCCGTCCTACCTCGTGTCTCACCTGCCTTTCGTAGAAAGAATATGGTACAGCAATTTTACAAACACTGGAATACATGAGAACTTAGTATAGTGTCGGTAAAACTGCTCAAACCCATGTCTTTAAAGTTGTACTTTACGGGGGAATTGTTAGGTAAGAAAAGTC *************************************.(((((..((((...(((((((((((.((((((...((((...........)))))))))).))))))))))).....)))).)))))..**************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M021 embryo	M042 female body	V111 male body
...............................................................................................AGTGTCGGTAAAACTGCTCAAACCCATG..............................................	28	0	1	3.00	3	3	0	0
................................................................................................GTGTCGGTAAAACTGCTCAAACCCATG..............................................	27	0	1	1.00	1	1	0	0
...............................................................................................GGTGTCGGTAAAACTGCTCAAACCCATG..............................................	28	1	1	1.00	1	1	0	0
...........................................................................................GTATAGTGTCGGTAAAACTGCT........................................................	22	0	2	0.50	1	0	1	0
............................................................................................................................................TACGGGGTAATAGGTAGGTAA........	21	3	5	0.20	1	0	0	1

Species	Coordinate	ID	Type	Alignment
droPer2	scaffold_0:10659886-10660054 -	dpe-mir-13b-1	Known_mirbase	GG----GGCAGGGCA------------G---GATGGAGCA---------------------------------------------CAGAGTGGACGGAAAGCATCTTTCTTATACCATGTCGTTAAAATGTTTGTGACCTTATGT---ACTCTTGAATCATATCACAGCCATTTTGACGAGTTTGGGTACAGAAATTTCAACATGAA-ATGC-------------CCCCT----TAAC---AATCC--ATT-CTTTTCAG--
dp5	2:9825041-9825209 +	dps-mir-13b-1	Known_mirbase	GG----GGCAGGGCA------------G---GATGGAGCA---------------------------------------------CAGAGTGGACGGAAAGCATCTTTCTTATACCATGTCGTTAAAATGTTTGTGACCTTATGT---ACTCTTGAATCATATCACAGCCATTTTGACGAGTTTGGGTACAGAAATTTCAACATAAA-ATGC-------------CCCCT----TAAC---AATCC--ATT-CTTTTCAG--
droWil2	scf2_1100000004902:2143031-2143197 -	dwi-mir-13b-1	Known_mirbase	GAAATG---------------------GATGG------TA------------------------TCCTTAGAATATGT--G--AA----T-----TGACTGCAACTTTCTTATACCATGTCGTTAAAATGTTTGTGACTTTATGTTGTGTC-TCTATTCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACATTGT-AGTT-------------CCTAT----TTAC---GA-----CCA-AC---CAGCC
droVir3	scaffold_13047:13335737-13335916 +	dvi-mir-13b-1	Known_mirbase	TC----GGCAGAATGGGC-TGGCAAGGACGAT------T--------------------------------ATCGTTT-----------TT----GCATTGCAATTTTCTTATACCATGTCGTTAAAATGCCTGTGACCTTATGT---ATT-TTATATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACAGAGC-ACACATAATGTGTGCGACGTGTA--C--------------ATG-CTCCTCTT--
droMoj3	scaffold_6540:10568460-10568645 +	dmo-mir-13b-1	Known_mirbase	GT----GTCACTGGA------------T---TATCCACCT-------------------------CAAT--CTCCATCTTCATTTGCATTC----GAATTGCAATTTTCTTATACCATGTCGTTAAAATGTCTGTGACCGTATGT---ATT-CACTATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACAGAGC-TCGCGTTACGCGTCCGACATGTA------------------TG-TTGTACTA--
droGri2	scaffold_14906:4357460-4357652 -	dgr-mir-13b-1	Known_mirbase	GCCGGG------GCC------------G---GTTCGTGCAGTCGCCGCCTCCTCCTGTTCCTCCTCCTTCTCCTTTGT--GTGTTTC----------TTTCTTTCTTTCTTATACCATGTCGTTAAAATGCTTGTGACCTTATGT---ATT-TTATATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATGTCAACAGAAA-ACAG-------------AAAA---------A-AA------ATGCATTTACAA--
droAna3	scaffold_13340:12827456-12827599 -	dan-mir-13b-1	Known_mirbase	GGCGCG-GC--GGCA------------G-----------------------------------------------GATGTCATAACCGATT----GTG-TTCATCTTTCTTATACCATGTCGTTAAAAGGCTTGTGACCTTATGT---ATTTCGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCACCATTCG-ACGC-------------CCC----------------------------------
droBip1	scf7180000396691:1710364-1710492 -			GC----GGCAGGC--------------------------------------------------------------GATTTCGTAACCGATT----GT--TCCGTCTTTCTTATACCATGTCGTTGAAAGGCTTGTGACCTTATGT---AGTTCGCAATCATATCACAGCCATTTTGACGAGTTTGGGCAAAGAAATGTCACCAT----------------------------------------------------------
droKik1	scf7180000302639:1443306-1443466 +			GCCAG---------------------AAGGAG------TA--------------------------------C--CGCTTCGCAA---ATC----AAATCGCTTCTTTCTTATACCATGTCGTTAAAATGCTTGTGACCTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACGTTGG-GCGC-------------CATTTTCCA----G-A-------ATT-CTTTACAG--
droFic1	scf7180000452523:592095-592230 -			GT-----------------------------------------------------------------------------------------------ATCCCATCTTTCTTATACCATGTCGTTAAAATGTTTGTGACCTTATGT---ATC-CACAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACATTGG-GCGC-------------CATTTCTTC----G-A--G----TTTCTTTTTCAA--
droEle1	scf7180000491080:1006964-1007114 -			GACA----T-----------------AA-------------------------------------------ATCAGTTTTTATAAGCGCTT----GCTTCGCATCTTTCTTATACCATGTCGTTAAAATGCTTGTGACCTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACATTTA-GGG---------------------------A-A-------GTT-CGTTTCAC--
droRho1	scf7180000779250:92766-92936 +			GCTGG--G----C------T-----AAA-------------------------------------------ATCAAGTTTCATAAGCGATT----GCATCCCATCTTTCTTATACCATGTCGTTAAAATGTTTGTGACCTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACAGTGG-GCGC-------------CATTTATGG----A-A-GTTCAGATT-CATTTCAG--
droBia1	scf7180000302136:835382-835530 -			GC--------------------------------------------------------------------------ATTTCGCAACCGTTC----GACTCGCATCTTTCTTATACCATGTCGTTAAAATGCTTGTGACCTTATGT---GTT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACATTGG-GCGC-------------CAATTAT------G-A-------GTT-ACTTTCAG--
droTak1	scf7180000415769:1926075-1926243 +			GCTGG--GCA--C------T-----AAA-------------------------------------------ATCATATTTCGTGACCGTTC----GTATCGCATCTTTCTTATACCATGTCGTTAAAATGTTTGTGACCTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACGTTGG-GCGC-------------CATTTATTA----GTA-------GTTACTTTTAAA--
droEug1	scf7180000409281:109669-109803 +			TA-----------------------------------------------------------------------------------------------TTCGCATCTTTCTTATACCATGTCGTTAAAATGTTTGTGACCTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACATTCGAGCGC-------------CATTTATGA----G-A-------GTT-ACTTTCAG--
dm3	chr3R:11243095-11243257 -	dme-mir-13b-1	Known_mirbase	GC----GGCAGCGGA--TCA-----AAA-------------------------------------------AACATATTTCATAACCGACTGACTGAACCACGTCTTTCTTATACCATGTCGTTAAAATGTTTGTGAACTTATGT---ATT-CACAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACATTGA-ACGG-------------------------------------AT-CTATCCTG--
droSim2	3r:9985715-9985849 +	dsi-mir-13b-1	Known_mirbase	GA------------------------AA-------------------------------------------AACATATTTCATAACCGACT----GAACCGCGTCTTTCTTATACCATGTCGTTAAAATGTTTGTGAACTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACATTAA-GCG---------------------------------------------------
droSec2	scaffold_0:10705162-10705296 +	dse-mir-13b-1	Known_mirbase	GA------------------------AA-------------------------------------------AACATATTTCATAACCGACT----GAACCGCGTCTTTCTTATACCATGTCGTTAAAATGTTTGTGAACTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACATTAA-GCG---------------------------------------------------
droYak3	3R:15188695-15188821 +	dya-mir-13b-1	Known_mirbase	TC-------------------------A-------------------------------------------AACATATTTCATAATCGATT----GACCCACGTCTTTCTTATACCATGTCGTTAAAATGTTTGTGAACTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACA-----------------------------------------------------------
droEre2	scaffold_4770:10769228-10769389 -	der-mir-13b-1	Known_mirbase	GG----GTTAAG--------------AA-------------------------------------------AACATATTTCAAAAGCGATT----GAACAACGTCTTTCTTATACCATGTCGTTAAAATGTTTGTGAACTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACAATGA-GCGC-------------CACTTAT------G-A-------GTT-ACTTGCAG--

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droPer2

GG----GGCAGGGCA------------G---GATGGAGCA---------------------------------------------CAGAGTGGACGGAAAGCATCTTTCTTATACCATGTCGTTAAAATGTTTGTGACCTTATGT---ACTCTTGAATCATATCACAGCCATTTTGACGAGTTTGGGTACAGAAATTTCAACATGAA-ATGC-------------CCCCT----TAAC---AATCC--ATT-CTTTTCAG--	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
................................................................................................................................................................TATCACAGCCATTTTGACGAGT................................................................................	22	2	42942.50	85885	359	13731	9615	23317	34867	3996
................................................................................................................................................................TATCACAGCCATTTTGACGAGTT...............................................................................	23	2	29027.00	58054	166	22277	3839	9275	19100	3397
................................................................................................................................................................TATCACAGCCATTTTGACGAG.................................................................................	21	2	2419.00	4838	110	1838	956	920	902	112
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT..............................................................................	24	2	1174.50	2349	0	618	77	297	986	371
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA..............................................................................	24	2	1117.50	2235	8	1576	313	77	205	56
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTT...............................................................................	22	2	883.50	1767	0	1656	3	34	54	20
.................................................................................................................................................................ATCACAGCCATTTTGACGAGT................................................................................	21	2	539.00	1078	0	1016	1	20	34	7
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA.............................................................................	25	2	447.00	894	4	706	141	6	28	9
....................................................................................................................................................................ACAGCCATTTTGACGAGT................................................................................	18	2	380.50	761	1	5	111	240	402	2
................................................................................................................................................................TATCACAGCCATTTTGACGAGC................................................................................	22	2	287.00	574	6	18	13	164	368	5
................................................................................................................................................................TATCACAGCCATTTTGACGA..................................................................................	20	2	277.50	555	16	244	128	74	83	10
....................................................................................................................................................................ACAGCCATTTTGACGAGTT...............................................................................	19	2	168.50	337	1	15	38	92	187	4
................................................................................................................................................................TATCACAGCCATTTTGACGAGA................................................................................	22	2	135.50	271	1	100	18	73	78	1
................................................................................................................................................................TATCACAGCCATTTTGACGAGG................................................................................	22	2	99.00	198	24	36	16	20	101	1
................................................................................................................................................................TATCACAGCCATTTTGACGAGTA...............................................................................	23	2	83.00	166	0	69	25	24	45	3
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG..............................................................................	24	2	71.50	143	13	82	28	9	11	0
................................................................................................................................................................TATCACAGCCATTTTGACG...................................................................................	19	2	66.50	133	12	77	9	14	21	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTC..............................................................................	24	2	65.00	130	1	26	2	18	26	57
.................................................................................................................................................................ATCACAGCCATTTTGACGAG.................................................................................	20	2	61.50	123	0	123	0	0	0	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA..............................................................................	23	2	51.50	103	0	101	2	0	0	0
..................................................................................................................................................................TCACAGCCATTTTGACGAGTT...............................................................................	21	2	49.50	99	0	86	0	6	2	5
.......................................................................................................................TCGTTAAAATGTTTGTGACCTTATG......................................................................................................................	25	1	40.00	40	22	1	10	4	3	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTC...............................................................................	23	2	39.00	78	1	6	4	11	50	6
................................................................................................................................................................TATCACAGCCATTTTGACGAGTAA..............................................................................	24	2	34.00	68	0	39	13	3	11	2
..................................................................................................................................................................TCACAGCCATTTTGACGAGT................................................................................	20	2	32.00	64	0	41	6	8	8	1
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAA.............................................................................	24	2	29.00	58	0	58	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGAC....................................................................................	18	2	27.50	55	39	9	1	0	6	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTT..............................................................................	23	2	26.50	53	0	48	0	0	1	4
...................................................................................................................................................................CACAGCCATTTTGACGAGT................................................................................	19	2	15.50	31	0	14	5	4	3	5
...............................................................................................................................................................ATATCACAGCCATTTTGACGAGT................................................................................	23	2	12.00	24	0	12	2	4	4	2
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTT.............................................................................	25	2	11.50	23	0	8	0	3	6	6
...................................................................................................................................................................CACAGCCATTTTGACGAGTT...............................................................................	20	2	10.00	20	0	9	3	3	0	5
................................................................................................................................................................TATCACAGCCATTTTGACGAGTAAA.............................................................................	25	2	9.00	18	0	16	1	0	1	0
....................................................................................................................................................................ACAGCCATTTTGACGAGTTT..............................................................................	20	2	9.00	18	0	1	0	5	12	0
...............................................................................................................................................................ATATCACAGCCATTTTGACGAGTT...............................................................................	24	2	9.00	18	0	17	0	0	1	0
.......................................................................................................................TCGTTAAAATGTTTGTGACCT..........................................................................................................................	21	1	8.00	8	6	1	1	0	0	0
.......................................................................................................................TCGTTAAAATGTTTGTGACC...........................................................................................................................	20	1	8.00	8	8	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGATC................................................................................	22	2	7.50	15	0	1	0	2	12	0
.................................................................................................................................................................ATCACAGCCATTTTGACGA..................................................................................	19	2	7.00	14	0	14	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTG...............................................................................	23	2	6.50	13	0	2	0	0	10	1
................................................................................................................................................................TATCACAGCCATTTTGACGAA.................................................................................	21	2	6.50	13	0	5	1	1	6	0
.....................................................................................................................................................................CAGCCATTTTGACGAGTT...............................................................................	18	2	6.00	12	0	9	2	1	0	0
...............................................................................................................................................................ATATCACAGCCATTTTGACGAG.................................................................................	22	2	5.50	11	0	2	7	1	1	0
....................................................................................................................................................................ACAGCCATTTTGACGAGC................................................................................	18	2	5.50	11	0	0	1	5	5	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTG.............................................................................	25	2	5.00	10	0	2	1	0	2	5
................................................................................................................................................................TATCACAGCCATTTTGACGACC................................................................................	22	2	5.00	10	0	0	0	1	9	0
................................................................................................................................................................TATCACAGCCATTTTGACGT..................................................................................	20	2	4.50	9	0	1	0	0	6	2
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTA.............................................................................	25	2	4.00	8	0	4	1	1	1	1

dp5

GG----GGCAGGGCA------------G---GATGGAGCA---------------------------------------------CAGAGTGGACGGAAAGCATCTTTCTTATACCATGTCGTTAAAATGTTTGTGACCTTATGT---ACTCTTGAATCATATCACAGCCATTTTGACGAGTTTGGGTACAGAAATTTCAACATAAA-ATGC-------------CCCCT----TAAC---AATCC--ATT-CTTTTCAG--	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
................................................................................................................................................................TATCACAGCCATTTTGACGAGTT...............................................................................	23	2	149495.50	298991	32	130121	100133	28458	14860	10722	12862	924	346	533
................................................................................................................................................................TATCACAGCCATTTTGACGAGT................................................................................	22	2	126180.50	252361	25	68373	70782	31883	43432	22806	14052	392	155	461
................................................................................................................................................................TATCACAGCCATTTTGACGAG.................................................................................	21	2	11810.50	23621	12	9757	3493	5583	3114	933	445	82	179	23
................................................................................................................................................................TATCACAGCCATTTTGACGAGC................................................................................	22	2	7491.00	14982	0	90	10959	3696	66	139	31	0	1	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTT...............................................................................	22	2	6067.00	12134	0	10910	625	464	56	33	39	3	3	1
................................................................................................................................................................TATCACAGCCATTTTGACGAGTC...............................................................................	23	2	5169.50	10339	1	50	8825	1401	22	21	18	0	1	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT..............................................................................	24	2	4561.00	9122	0	4679	984	741	231	440	1943	33	68	3
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA..............................................................................	24	2	4504.00	9008	0	4170	3488	143	763	89	217	120	15	3
.................................................................................................................................................................ATCACAGCCATTTTGACGAGT................................................................................	21	2	3088.00	6176	0	5333	305	466	31	20	20	1	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA.............................................................................	25	2	1359.50	2719	0	1857	530	6	225	14	57	26	4	0
................................................................................................................................................................TATCACAGCCATTTTGACGA..................................................................................	20	2	1005.00	2010	2	1202	148	309	191	83	34	17	18	6
.......................................................................................................................TCGTTAAAATGTTTGTGACCTTATG......................................................................................................................	25	1	679.00	679	0	18	299	7	71	1	0	0	1	282
................................................................................................................................................................TATCACAGCCATTTTGACGAGA................................................................................	22	2	488.00	976	0	392	222	136	114	61	11	17	20	3
....................................................................................................................................................................ACAGCCATTTTGACGAGT................................................................................	18	2	429.00	858	0	56	16	33	473	215	64	0	0	1
.................................................................................................................................................................ATCACAGCCATTTTGACGAG.................................................................................	20	2	407.50	815	0	744	13	55	3	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTA...............................................................................	23	2	396.00	792	0	330	259	71	49	38	29	12	4	0
..................................................................................................................................................................TCACAGCCATTTTGACGAGTT...............................................................................	21	2	354.00	708	0	529	72	79	15	7	4	0	0	2
................................................................................................................................................................TATCACAGCCATTTTGACG...................................................................................	19	2	335.50	671	9	495	27	75	22	21	0	14	8	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTC..............................................................................	24	2	276.00	552	0	111	155	131	10	26	80	3	36	0
................................................................................................................................................................TATCACAGCCATTTTGACGAC.................................................................................	21	2	270.00	540	0	2	324	212	2	0	0	0	0	0
....................................................................................................................................................................ACAGCCATTTTGACGAGTT...............................................................................	19	2	249.50	499	0	147	14	21	132	116	62	5	2	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTT..............................................................................	23	2	210.50	421	0	388	14	13	2	0	4	0	0	0
..................................................................................................................................................................TCACAGCCATTTTGACGAGT................................................................................	20	2	207.00	414	0	259	42	75	29	4	2	0	3	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG..............................................................................	24	2	200.50	401	1	286	55	8	42	5	4	0	0	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA..............................................................................	23	2	192.50	385	0	352	24	3	1	0	0	5	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGG................................................................................	22	2	173.50	347	0	52	46	22	183	38	6	0	0	0
...................................................................................................................................................................CACAGCCATTTTGACGAGTT...............................................................................	20	2	142.00	284	0	176	35	45	5	7	16	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTAA..............................................................................	24	2	104.50	209	0	109	48	4	25	2	15	6	0	0
.....................................................................................................................................................................CAGCCATTTTGACGAGTT...............................................................................	18	2	85.50	171	0	135	20	13	3	0	0	0	0	0
...............................................................................................................................................................ATATCACAGCCATTTTGACGAGTT...............................................................................	24	2	81.50	163	0	136	5	5	1	0	0	15	1	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAA.............................................................................	24	2	73.50	147	0	139	5	0	0	0	0	3	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTG...............................................................................	23	2	70.50	141	0	15	88	29	6	3	0	0	0	0
...................................................................................................................................................................CACAGCCATTTTGACGAGT................................................................................	19	2	68.00	136	1	81	17	26	4	1	6	0	0	0
...............................................................................................................................................................ATATCACAGCCATTTTGACGAGT................................................................................	23	2	59.50	119	0	77	15	15	8	3	0	1	0	0
...............................................................................................................................................................ATATCACAGCCATTTTGACGAG.................................................................................	22	2	57.50	115	0	37	30	12	31	3	0	1	1	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTT.............................................................................	25	2	52.00	104	0	60	7	4	0	3	19	8	3	0
................................................................................................................................................................TATCACAGCCATTTTGACGATC................................................................................	22	2	51.50	103	0	0	83	19	0	1	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGAC....................................................................................	18	2	46.00	92	1	37	23	25	2	0	0	4	0	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTC...............................................................................	22	2	45.00	90	0	3	64	23	0	0	0	0	0	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGC................................................................................	21	2	44.50	89	0	6	36	47	0	0	0	0	0	0
.................................................................................................................................................................ATCACAGCCATTTTGACGA..................................................................................	19	2	44.50	89	0	89	0	0	0	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAA.................................................................................	21	2	34.00	68	0	30	12	12	4	6	3	0	1	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGAC...............................................................................	23	2	26.00	52	0	0	45	5	1	1	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTAAA.............................................................................	25	2	24.50	49	0	37	8	0	2	0	2	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTG.............................................................................	25	2	23.00	46	0	29	1	0	9	3	2	2	0	0
.......................................................................................................................TCGTTAAAATGTTTGTGACCTTAT.......................................................................................................................	24	1	21.00	21	0	1	15	1	1	0	0	0	0	3
................................................................................................................................................................TATCACAGCCATTTTGACGT..................................................................................	20	2	20.00	40	0	8	3	4	1	4	20	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGCC...............................................................................	23	2	18.50	37	0	0	34	3	0	0	0	0	0	0
.......................................................................................................................TCGTTAAAATGTTTGTGACCT..........................................................................................................................	21	1	17.00	17	0	1	8	8	0	0	0	0	0	0
.......................................................................................................................TCGTTAAAATGTTTGTGACCTT.........................................................................................................................	22	1	17.00	17	0	5	8	0	3	0	0	0	0	1
.................................................................................................................................................................ATCACAGCCATTTTGACG...................................................................................	18	2	16.50	33	0	33	0	0	0	0	0	0	0	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGA................................................................................	21	2	16.50	33	0	29	1	3	0	0	0	0	0	0
..................................................................................................................................................................TCACAGCCATTTTGACGAG.................................................................................	19	2	16.50	33	0	27	0	4	2	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTA.............................................................................	25	2	16.00	32	0	20	0	0	5	0	4	1	2	0
.......................................................................................................................TCGTTAAAATGTTTGTGACCTTATGA---..................................................................................................................	26	1	16.00	16	0	1	9	0	0	0	0	0	0	6
........................................................................................................................CGTTAAAATGTTTGTGACCTTATG......................................................................................................................	24	1	15.00	15	0	1	2	0	1	0	2	0	0	9
....................................................................................................................................................................ACAGCCATTTTGACGAGTTT..............................................................................	20	2	14.00	28	0	3	0	0	5	8	11	0	1	0
................................................................................................................................................................TATCACAGCCATTTTGACGAT.................................................................................	21	2	13.00	26	0	3	9	11	3	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAAA................................................................................	22	2	11.50	23	0	15	5	1	2	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCC.............................................................................	25	3	11.33	34	0	1	0	6	0	2	15	0	10	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTA...............................................................................	22	2	11.00	22	0	22	0	0	0	0	0	0	0	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTG..............................................................................	23	2	10.50	21	0	21	0	0	0	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAAC................................................................................	22	2	10.50	21	0	0	15	6	0	0	0	0	0	0
..................................................................................................................................................................TCACAGCCATTTTGACGAGTTT..............................................................................	22	2	10.50	21	0	18	0	1	0	0	2	0	0	0
...................................................................................................................................................................CACAGCCATTTTGACGAG.................................................................................	18	2	10.50	21	0	17	0	3	0	0	0	0	1	0
..................................................................................................................................................................TCACAGCCATTTTGACGAGTTA..............................................................................	22	2	10.50	21	0	18	3	0	0	0	0	0	0	0
....................................................................................................................................................................ACAGCCATTTTGACGAGTTA..............................................................................	20	2	10.00	20	0	10	1	0	9	0	0	0	0	0
.......................................................................................................................TCGTTAAAATGTTTGTGACCTTA........................................................................................................................	23	1	10.00	10	0	0	9	1	0	0	0	0	0	0
.......................................................................................................................TCGTTAAAATGTTTGTGACCTTATGT---..................................................................................................................	26	1	10.00	10	0	0	5	1	0	0	0	0	0	4
................................................................................................................................................................TATCACAGCCATTTTGACGACC................................................................................	22	2	9.50	19	0	0	14	4	0	1	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAT.............................................................................	25	2	9.00	18	0	10	7	0	0	0	1	0	0	0

droWil2

GAAATG---------------------GATGG------TA------------------------TCCTTAGAATATGT--G--AA----T-----TGACTGCAACTTTCTTATACCATGTCGTTAAAATGTTTGTGACTTTATGTTGTGTC-TCTATTCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACATTGT-AGTT-------------CCTAT----TTAC---GA-----CCA-AC---CAGCC	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
................................................................................................................................................................TATCACAGCCATTTTGACGAGT................................................................................	22	2	408096.00	816192	5764	26254	7777	368409	407988
................................................................................................................................................................TATCACAGCCATTTTGACGAGTT...............................................................................	23	2	80887.00	161774	962	36892	4151	94359	25410
................................................................................................................................................................TATCACAGCCATTTTGACGAG.................................................................................	21	2	24240.00	48480	3345	4889	247	9190	30809
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT..............................................................................	24	1	4647.00	4647	11	1396	359	1807	1074
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA..............................................................................	24	2	4281.50	8563	2	1589	31	6851	90
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA.............................................................................	25	2	2590.00	5180	2	805	6	4357	10
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTT...............................................................................	22	2	1703.00	3406	2	3015	9	277	103
.................................................................................................................................................................ATCACAGCCATTTTGACGAGT................................................................................	21	2	1350.50	2701	5	1959	6	185	546
................................................................................................................................................................TATCACAGCCATTTTGACGA..................................................................................	20	2	1308.50	2617	144	296	20	328	1829
................................................................................................................................................................TATCACAGCCATTTTGACGAGC................................................................................	22	2	1163.00	2326	194	36	24	534	1538
.......................................................................................................................TCGTTAAAATGTTTGTGACTTTATG......................................................................................................................	25	1	1060.00	1060	278	8	0	669	105
....................................................................................................................................................................ACAGCCATTTTGACGAGT................................................................................	18	2	672.50	1345	24	29	4	568	720
................................................................................................................................................................TATCACAGCCATTTTGACGAGA................................................................................	22	2	617.50	1235	24	65	6	284	856
................................................................................................................................................................TATCACAGCCATTTTGACG...................................................................................	19	2	601.50	1203	492	151	1	21	538
................................................................................................................................................................TATCACAGCCATTTTGACGAGG................................................................................	22	2	463.00	926	353	34	0	224	315
..................................................................................................................................................................TCACAGCCATTTTGACGAGT................................................................................	20	2	280.50	561	0	110	3	159	289
................................................................................................................................................................TATCACAGCCATTTTGACGAGTA...............................................................................	23	2	259.50	519	3	76	3	351	86
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG..............................................................................	24	2	245.50	491	59	69	2	267	94
...............................................................................................................................................................ATATCACAGCCATTTTGACGAG.................................................................................	22	2	176.50	353	19	19	0	152	163
................................................................................................................................................................TATCACAGCCATTTTGACGAGTAA..............................................................................	24	2	173.00	346	0	63	1	274	8
.................................................................................................................................................................ATCACAGCCATTTTGACGAG.................................................................................	20	2	169.50	339	0	311	0	3	25
...................................................................................................................................................................CACAGCCATTTTGACGAGT................................................................................	19	2	128.50	257	0	30	3	30	194
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTT..............................................................................	23	1	124.00	124	0	118	0	4	2
....................................................................................................................................................................ACAGCCATTTTGACGAGTT...............................................................................	19	2	101.50	203	9	37	7	122	28
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA..............................................................................	23	2	101.50	203	0	171	0	32	0
..................................................................................................................................................................TCACAGCCATTTTGACGAGTT...............................................................................	21	2	100.50	201	0	144	4	38	15
.......................................................................................................................TCGTTAAAATGTTTGTGACTTT.........................................................................................................................	22	1	99.00	99	97	0	0	1	1
.......................................................................................................................TCGTTAAAATGTTTGTGACTTTAT.......................................................................................................................	24	1	97.00	97	54	0	0	36	7
................................................................................................................................................................TATCACAGCCATTTTGACGAGTC...............................................................................	23	2	85.00	170	3	10	9	102	46
................................................................................................................................................................TATCACAGCCATTTTGACGAC.................................................................................	21	2	71.50	143	118	0	1	5	19
.......................................................................................................................TCGTTAAAATGTTTGTGACT...........................................................................................................................	20	1	62.00	62	61	0	0	0	1
................................................................................................................................................................TATCACAGCCATTTTGACGAA.................................................................................	21	2	53.50	107	7	9	1	9	81
...............................................................................................................................................................ATATCACAGCCATTTTGACGAGT................................................................................	23	2	49.00	98	1	35	0	33	29
................................................................................................................................................................TATCACAGCCATTTTGACGAGTAAA.............................................................................	25	2	47.00	94	0	25	0	69	0
...................................................................................................................................................................CACAGCCATTTTGACGAGTT...............................................................................	20	2	41.00	82	0	64	2	7	9
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAA.............................................................................	24	2	39.50	79	0	69	0	10	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTT.............................................................................	25	1	38.00	38	0	23	4	6	5
........................................................................................................................CGTTAAAATGTTTGTGACTTTATG......................................................................................................................	24	1	38.00	38	13	1	0	22	2
.....................................................................................................................................................................CAGCCATTTTGACGAGTT...............................................................................	18	2	37.50	75	0	65	1	5	4
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAT.............................................................................	25	2	29.50	59	0	9	0	47	3
.......................................................................................................................TCGTTAAAATGTTTGTGACTTTA........................................................................................................................	23	1	26.00	26	14	2	0	9	1
................................................................................................................................................................TATCACAGCCATTTTGAC....................................................................................	18	2	25.50	51	19	26	0	5	1
................................................................................................................................................................TATCACAGCCATTTTGACGAT.................................................................................	21	2	25.00	50	1	1	1	24	23
.......................................................................................................................TCGTTAAAATGTTTGTGACTTTATGA.....................................................................................................................	26	1	20.00	20	12	0	0	8	0
..................................................................................................................................................................TCACAGCCATTTTGACGAG.................................................................................	19	2	19.50	39	0	18	0	4	17
................................................................................................................................................................TATCACAGCCATTTTGACGAGTG...............................................................................	23	2	18.50	37	3	11	0	14	9
...............................................................................................................................................................ATATCACAGCCATTTTGACGAGTT...............................................................................	24	2	18.50	37	0	34	0	3	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTAA............................................................................	26	2	18.50	37	0	8	0	29	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTA.............................................................................	25	1	18.00	18	0	4	0	14	0
...............................................................................................................................................................ATATCACAGCCATTTTGACGA..................................................................................	21	2	15.00	30	5	3	0	7	15
...............................................................................................................................................................ATATCACAGCCATTTTGACG...................................................................................	20	2	14.50	29	8	1	0	0	20
................................................................................................................................................................TATCACAGCCATTTTGACGG..................................................................................	20	2	12.50	25	22	0	0	0	3
.......................................................................................................................TCGTTAAAATGTTTGTGACTTTATGT.....................................................................................................................	26	1	12.00	12	0	0	0	12	0
...................................................................................................................................................................CACAGCCATTTTGACGAG.................................................................................	18	2	11.00	22	0	8	0	0	14
..................................................................................................................................................................TCACAGCCATTTTGACGAGTTT..............................................................................	22	1	11.00	11	0	8	1	0	2
.......................................................................................................................TCGTTAAAATGTTTGTGACTT..........................................................................................................................	21	1	10.00	10	9	0	0	1	0
.........................................................................................................................GTTAAAATGTTTGTGACTTTATG......................................................................................................................	23	1	10.00	10	0	0	0	10	0
................................................................................................................................................................TATCACAGCCATTTTGACGT..................................................................................	20	2	9.50	19	0	0	1	3	15
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTAAA...........................................................................	27	2	9.00	18	0	4	0	14	0
.................................................................................................................................................................ATCACAGCCATTTTGACGA..................................................................................	19	2	8.50	17	0	16	0	0	1
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAC.............................................................................	25	3	8.33	25	0	0	0	24	1
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAAT............................................................................	26	2	7.50	15	0	0	0	15	0
..................................................................................................................................................................TCACAGCCATTTTGACGAGTTA..............................................................................	22	2	7.50	15	0	12	0	3	0
................................................................................................................................................................TATCACAGCCATTTTGACGAAA................................................................................	22	2	7.50	15	0	1	0	6	8
.......................................................................................................................TCGTTAAAATGTTTGTGACC...........................................................................................................................	20	1	7.00	7	7	0	0	0	0
.......................................................................................................................TCGTTAAAATGTTTGTGAC............................................................................................................................	19	1	7.00	7	7	0	0	0	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTTT.............................................................................	24	1	7.00	7	0	7	0	0	0
...................................................................................................................................................................CACAGCCATTTTGACGAGTTT..............................................................................	21	1	7.00	7	0	4	2	0	1
.................................................................................................................................................................ATCACAGCCATTTTGACGAGA................................................................................	21	2	6.50	13	0	12	0	0	1
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAAC............................................................................	26	2	6.00	12	0	0	0	12	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTTT............................................................................	26	1	5.00	5	0	4	0	1	0
....................................................................................................................................................................ACAGCCATTTTGACGAGTTA..............................................................................	20	2	5.00	10	0	2	0	8	0

droVir3

TC----GGCAGAATGGGC-TGGCAAGGACGAT------T--------------------------------ATCGTTT-----------TT----GCATTGCAATTTTCTTATACCATGTCGTTAAAATGCCTGTGACCTTATGT---ATT-TTATATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACAGAGC-ACACATAATGTGTGCGACGTGTA--C--------------ATG-CTCCTCTT--	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells	SRR2096013 Ovary_Strain_9_oxidized	SRR2096014 Ovary_Strain_160_oxidized	SRR2096026 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096038 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096050 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096055 Ovary_Min_43	SRR2096056 Ovary_Min_46	SRR2096057 Ovary_Min_50	SRR2096058 Ovary_Min_98	SRR2096059 Ovary_Min_164	SRR2096060 Ovary_Min_193	SRR2096061 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096072 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096079 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096080 embryo_0-2h from 15to16 day old nondysgenic mothers	SRR2096081 embryo_0-2h from 15to16 day old nondysgenic mothers
................................................................................................................................................................TATCACAGCCATTTTGACGAGTT...............................................................................	23	2	299615.50	599231	57	188	62186	14014	28445	5184	13419	389	2052	735	945	136	805	951	10668	6041	2035	5985	5465	3549	9335	5243	8313	49107	22732	21530	38557	40069	21356	19125	7283	23885	6595	9363	5370	10077	4971	6473	21870	15245	25	69	39	42	36	72	59	69	127	136	247	286	196	266	219	131	110	200	832	5049	13394	13611	448	11637	16863	1029	882	837	3772	3574	2712	2412	4294	3652	887	164	202	367	536
................................................................................................................................................................TATCACAGCCATTTTGACGAGT................................................................................	22	2	282002.00	564004	171	646	63165	13005	11321	4446	6727	1778	1868	2370	937	754	4220	5451	11817	7836	3479	9164	8000	4315	7965	8046	11215	21264	15721	11665	21262	22349	17118	19306	7646	24877	7325	8043	12671	14784	14462	9996	15751	12702	17	31	34	27	22	49	39	27	62	68	95	141	90	107	68	49	39	84	384	13479	33231	21586	87	5969	8649	3962	3796	2643	3121	3144	2353	2007	3310	2667	2539	621	664	1321	1784
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA..............................................................................	24	2	41828.50	83657	1	6	1848	540	2337	120	988	5	64	9	26	89	527	496	168	105	41	125	90	100	510	99	212	4025	3857	3193	5863	6405	1093	808	333	1348	6472	423	4093	12950	6975	6050	4536	504	11	10	8	9	9	10	8	7	15	11	18	23	13	12	23	0	0	2	29	433	146	200	11	1663	1687	205	201	155	206	130	87	110	155	192	182	38	33	70	101
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA.............................................................................	25	2	41189.50	82379	1	0	998	175	773	34	419	1	35	0	10	92	769	553	19	15	3	7	11	13	59	8	34	1866	3407	2440	5617	4471	165	120	54	212	8858	77	5279	15929	13216	7397	3749	40	6	17	13	8	3	5	3	5	9	6	4	5	3	7	3	0	0	1	9	347	20	58	2	1576	1003	417	366	299	108	90	50	87	70	70	278	82	76	164	183
................................................................................................................................................................TATCACAGCCATTTTGACGAG.................................................................................	21	2	29809.50	59619	131	426	11846	1092	167	139	87	544	201	308	123	20	100	137	1012	780	372	865	586	338	284	590	908	375	1245	867	1830	1544	2855	2898	1294	4120	623	240	817	923	827	424	302	418	4	11	16	13	7	6	13	11	25	15	25	34	12	28	19	7	7	34	109	551	1482	628	5	216	716	1606	1491	1583	718	792	570	498	672	663	1458	369	444	911	1192
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT..............................................................................	24	2	27781.50	55563	1	3	3236	416	1833	560	887	36	142	68	73	46	249	249	1153	649	268	868	565	542	1308	608	1227	2888	1734	1303	2704	2437	2106	2199	875	3085	1160	1659	783	2507	1361	1154	3592	2067	4	3	1	0	0	3	3	0	5	3	7	12	5	2	5	3	3	11	15	398	969	2509	25	850	1299	72	62	60	98	88	75	33	126	74	48	12	14	34	31
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTC..............................................................................	24	2	21978.50	43957	11	3	1367	344	938	1378	462	2	1	38	4	25	28	28	155	151	21	77	119	208	5185	124	232	1234	301	374	495	433	5014	3865	1945	7026	66	3954	15	138	25	55	966	5476	1	1	3	0	1	1	1	1	2	0	3	5	4	2	2	1	0	4	10	71	117	764	49	109	190	7	6	7	39	38	31	32	64	75	13	4	7	2	7
.................................................................................................................................................................ATCACAGCCATTTTGACGAGT................................................................................	21	2	3170.50	6341	0	0	5885	117	4	6	2	0	0	0	0	0	8	11	18	8	3	14	9	2	2	2	7	5	14	10	20	21	14	20	7	24	11	1	13	10	9	12	2	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	1	2	20	3	0	2	10	0	0	0	0	1	1	2	0	3	0	0	0	1	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTT...............................................................................	22	2	3146.50	6293	0	0	5674	126	5	2	4	0	2	0	1	0	1	2	24	8	0	8	9	3	9	7	9	16	29	20	50	49	19	38	10	21	6	8	5	15	8	10	8	12	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	1	2	11	11	0	11	24	2	0	0	2	1	3	0	1	3	0	0	0	0	1
................................................................................................................................................................TATCACAGCCATTTTGACGAGTAA..............................................................................	24	2	3122.50	6245	0	1	119	25	81	17	38	2	7	4	2	2	31	38	2	2	2	1	1	2	65	4	3	140	253	133	336	216	154	134	78	205	373	59	319	730	1066	415	579	59	1	3	0	0	1	0	2	0	0	0	1	0	0	0	2	0	0	0	0	42	5	17	0	115	71	36	43	31	22	7	10	9	4	7	44	14	10	24	26
....................................................................................................................................................................ACAGCCATTTTGACGAGTT...............................................................................	19	2	2972.00	5944	0	1	108	4	584	176	437	7	38	33	25	0	5	11	88	50	24	50	41	45	261	54	54	1131	163	126	172	145	76	64	33	113	35	233	49	72	34	38	396	358	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	49	157	14	4	171	190	4	2	1	2	1	3	1	2	2	4	0	0	2	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTA...............................................................................	23	2	2085.00	4170	0	2	193	69	56	20	33	10	3	9	1	6	15	18	20	10	6	13	11	5	206	4	14	106	82	72	136	141	314	296	150	493	129	111	140	179	221	144	114	175	0	1	1	1	0	0	1	2	0	0	1	3	1	1	0	0	0	0	2	25	26	56	0	42	49	39	29	20	13	20	16	5	16	13	22	7	7	8	16
................................................................................................................................................................TATCACAGCCATTTTGACGA..................................................................................	20	2	2065.00	4130	7	36	860	36	15	4	11	4	2	1	0	0	3	7	130	89	36	98	93	55	10	120	120	37	104	79	134	106	124	139	69	226	77	19	63	98	96	34	36	24	0	0	1	0	2	2	1	4	3	0	4	4	1	0	1	3	2	14	6	23	167	53	4	18	76	49	52	52	46	47	43	39	50	54	37	10	8	26	26
....................................................................................................................................................................ACAGCCATTTTGACGAGT................................................................................	18	2	1790.00	3580	0	1	86	4	150	68	112	35	51	35	17	2	42	35	55	43	28	57	37	35	113	49	79	332	105	71	70	83	48	69	36	102	26	141	126	101	82	39	178	126	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	148	386	20	0	57	73	4	2	3	3	1	2	4	0	1	2	0	0	1	1
................................................................................................................................................................TATCACAGCCATTTTGACGAGTC...............................................................................	23	2	1653.00	3306	2	5	232	915	61	73	29	1	0	8	2	0	2	0	14	14	2	14	8	13	248	10	24	74	22	23	23	20	193	166	76	284	3	174	6	7	7	7	60	237	0	0	0	0	0	1	0	0	0	1	1	0	0	0	0	0	0	0	3	26	40	114	0	13	28	2	1	3	2	2	0	0	4	4	1	0	0	0	1
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG..............................................................................	24	2	1518.00	3036	4	10	211	25	38	8	19	6	13	4	4	1	30	21	6	7	1	11	7	5	24	12	20	87	109	88	148	139	96	77	28	103	144	16	89	302	184	143	106	18	0	1	1	0	0	1	0	0	0	1	2	2	0	0	0	0	0	1	1	29	27	14	0	11	5	16	19	18	86	78	66	47	91	97	18	6	5	14	15
................................................................................................................................................................TATCACAGCCATTTTGACGAGC................................................................................	22	2	1320.50	2641	6	36	50	1651	23	7	9	2	2	2	2	2	7	7	21	8	4	8	2	3	18	7	8	39	27	10	17	12	13	14	7	30	8	10	12	8	4	4	38	28	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	30	324	50	0	12	15	12	7	12	1	1	0	0	0	1	8	0	1	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTAAA.............................................................................	25	2	1027.50	2055	0	1	80	8	11	0	9	0	1	1	3	2	25	12	1	0	0	0	0	1	4	0	1	44	90	44	171	64	7	8	3	14	139	3	108	222	429	100	219	2	0	3	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	6	0	0	0	52	20	32	26	19	6	0	0	3	0	5	19	3	4	12	16
................................................................................................................................................................TATCACAGCCATTTTGACGAGA................................................................................	22	2	1006.00	2012	2	3	382	51	9	0	7	1	2	5	4	0	10	11	20	15	8	19	13	6	11	17	19	21	53	31	57	48	43	42	24	62	23	7	31	42	84	25	31	8	0	1	2	0	2	2	2	2	4	2	5	4	1	4	0	0	0	9	6	33	98	47	0	35	37	118	111	56	11	5	7	7	10	7	39	13	23	22	40
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCA.............................................................................	25	2	952.50	1905	0	0	27	3	35	5	19	0	0	0	0	1	16	5	2	4	0	1	1	2	51	2	2	57	18	20	20	18	67	59	24	67	23	38	64	502	283	253	83	47	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	18	0	12	0	10	17	4	2	4	1	1	3	0	1	0	5	0	0	2	5
................................................................................................................................................................TATCACAGCCATTTTGACG...................................................................................	19	2	674.00	1348	35	213	350	9	4	0	4	2	0	0	1	0	2	0	20	18	7	18	8	9	1	6	20	14	19	22	25	24	26	29	9	37	11	3	16	21	27	5	8	3	0	0	1	0	0	1	0	0	1	0	1	1	0	2	1	1	0	2	3	3	45	1	3	3	13	1	2	7	39	36	28	25	57	33	5	3	2	1	1
....................................................................................................................................................................ACAGCCATTTTGACGAGTTA..............................................................................	20	2	562.50	1125	0	0	6	0	90	8	82	0	1	0	4	0	5	2	5	1	1	3	3	1	25	3	4	127	35	21	38	48	9	3	2	4	44	13	50	109	69	51	157	20	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	1	0	33	33	0	2	2	0	0	0	0	0	0	2	0	0	2	2
.................................................................................................................................................................ATCACAGCCATTTTGACGAG.................................................................................	20	2	530.00	1060	0	0	1041	5	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	1	0	0	0	0	0	1	1	1	0	3	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................TCGTTAAAATGCCTGTGACCTTATG......................................................................................................................	25	1	505.00	505	0	6	4	133	0	0	0	0	0	0	0	0	0	0	4	0	1	2	2	1	0	2	3	0	0	0	0	0	3	5	1	3	1	0	1	2	0	0	0	1	0	0	1	5	6	8	1	5	3	1	7	3	3	8	9	1	0	0	14	4	5	1	0	0	0	16	17	54	0	2	0	0	0	0	27	52	56	7	14
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTA.............................................................................	25	2	470.50	941	0	0	20	2	23	1	5	1	0	0	0	1	12	10	4	1	0	4	2	4	6	3	3	25	38	22	56	53	29	22	9	37	59	9	40	140	89	59	56	11	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	8	5	7	0	13	34	3	1	3	0	3	2	0	1	0	0	1	0	1	1
....................................................................................................................................................................ACAGCCATTTTGACGAGTTAA.............................................................................	21	2	377.00	754	0	0	6	1	16	1	15	0	3	0	0	2	8	3	0	1	0	0	1	0	3	0	0	45	18	16	28	21	1	0	0	0	68	4	72	116	84	57	113	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	30	9	1	0	2	0	0	0	0	0	0	3	0	0	1	2
....................................................................................................................................................................ACAGCCATTTTGACGAGTTT..............................................................................	20	2	335.50	671	0	0	8	0	50	16	35	0	5	0	3	0	2	2	12	10	4	8	10	2	39	9	11	77	16	5	12	11	4	10	9	9	3	45	7	16	11	8	67	69	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	14	3	2	21	18	0	0	1	0	0	0	0	2	0	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTT.............................................................................	25	2	329.50	659	0	0	46	9	4	14	6	2	1	0	0	1	0	1	27	7	4	12	8	14	14	11	12	21	12	12	35	27	36	44	20	72	7	21	4	27	9	17	20	11	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	2	5	23	0	8	17	0	0	0	6	2	0	1	2	1	0	0	1	0	0
....................................................................................................................................................................ACAGCCATTTTGACGAGTTC..............................................................................	20	2	321.00	642	0	0	3	1	19	44	20	0	0	1	1	0	0	0	1	1	0	1	0	0	132	0	2	21	1	5	5	1	27	20	18	51	3	89	0	0	0	1	23	137	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	2	1	7	0	1	1	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAT.............................................................................	25	2	315.00	630	0	0	16	3	15	0	6	0	1	0	0	0	10	3	0	0	3	1	1	1	4	0	3	20	30	17	33	48	11	16	6	35	53	4	26	89	40	47	23	5	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	4	5	0	8	27	3	2	1	0	1	1	0	0	0	1	0	0	0	1
................................................................................................................................................................TATCACAGCCATTTTGACGAGG................................................................................	22	2	269.50	539	9	57	69	5	6	2	4	3	2	1	0	0	5	10	6	2	1	0	2	1	8	1	7	7	2	0	0	2	0	0	1	18	1	5	2	1	4	2	10	9	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	2	49	74	55	0	26	17	3	0	0	7	9	7	10	7	2	0	0	0	1	2
..................................................................................................................................................................TCACAGCCATTTTGACGAGTT...............................................................................	21	2	255.00	510	0	0	335	32	5	1	0	0	1	0	0	0	0	0	4	1	0	0	2	1	0	1	3	11	16	13	18	20	3	6	3	4	1	0	2	3	2	4	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	2	4	0	0	0	0	0	0	2	0	2	1	0	0	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGAC....................................................................................	18	2	249.00	498	3	8	47	2	2	0	0	0	0	0	0	0	0	0	17	10	4	6	7	8	0	7	8	2	20	13	26	21	15	16	13	15	12	5	20	44	32	7	7	2	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	2	3	0	0	2	3	0	0	6	6	4	5	5	9	4	7	10	11	6	11	0	0	1	2
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCC.............................................................................	25	3	248.33	745	0	0	33	1	16	19	1	0	0	4	0	0	0	0	0	1	0	1	0	2	93	1	3	22	5	4	6	5	75	57	50	136	0	65	0	0	0	0	12	112	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	13	0	0	6	0	0	0	0	0	0	0	0	1	0	0	0	0	0
..................................................................................................................................................................TCACAGCCATTTTGACGAGT................................................................................	20	2	245.00	490	0	1	305	27	2	2	2	0	0	0	0	0	7	5	5	1	1	1	3	2	6	3	4	4	8	3	6	11	12	7	5	9	3	0	2	5	10	4	5	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	8	2	0	0	0	1	1	0	0	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................CAGCCATTTTGACGAGTT...............................................................................	18	2	197.00	394	0	0	86	13	21	15	29	0	1	0	1	0	0	0	5	3	4	5	3	3	10	3	0	40	22	5	16	11	7	6	2	13	6	11	1	5	1	3	17	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	2	8	2	0	0	0	0	0	1	1	0	0	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCT.............................................................................	25	2	184.00	368	0	0	3	2	8	5	1	0	0	0	0	1	1	0	0	0	0	1	0	2	32	2	1	8	2	2	1	5	47	29	26	66	0	39	0	3	0	0	10	42	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	13	0	0	5	2	3	1	0	0	0	0	3	1	0	0	0	0	0
.......................................................................................................................TCGTTAAAATGCCTGTGACCTT.........................................................................................................................	22	1	173.00	173	1	59	3	20	0	0	0	1	0	0	0	0	0	0	8	6	3	4	4	0	0	7	9	0	0	0	0	0	2	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	2	1	2	3	0	3	3	0	0	3	6	0	5	1	0	0	0	0	1	1	0	2	0	1	1	0	3	0	2	1	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTT..............................................................................	23	2	172.00	344	0	0	284	4	4	0	0	0	0	0	0	0	1	0	2	1	0	1	0	0	2	2	1	2	0	2	5	4	2	4	0	4	1	3	2	1	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	1	0	3	0	0	0	0	0	0	0	2	0	0	0	0	0	0
...................................................................................................................................................................CACAGCCATTTTGACGAGTT...............................................................................	20	2	170.00	340	0	0	127	25	8	4	7	0	1	0	0	0	0	1	2	2	1	1	2	1	3	2	1	24	4	2	12	6	4	7	1	11	2	3	1	3	3	0	2	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	4	46	1	5	0	0	0	2	2	0	0	0	0	0	0	0	0	0
.......................................................................................................................TCGTTAAAATGCCTGTGACCT..........................................................................................................................	21	1	159.00	159	3	58	5	10	0	0	0	1	0	1	0	0	0	0	5	5	4	3	4	0	0	4	4	0	0	0	1	0	1	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	1	1	5	2	4	3	2	0	0	6	3	0	4	0	0	0	0	0	0	2	0	0	0	0	0	1	5	2	1	0	1
...................................................................................................................................................................CACAGCCATTTTGACGAGT................................................................................	19	2	128.50	257	0	0	147	16	3	0	2	0	1	1	0	0	2	2	2	1	0	2	1	0	0	1	3	4	7	5	7	2	4	5	0	5	1	0	2	4	6	2	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	4	5	1	1	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA..............................................................................	23	2	122.50	245	0	0	155	9	2	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	3	2	3	10	0	1	0	0	6	0	5	17	9	12	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	2	2	0	0	0	0	0	0	0	0	0	0	1	0	1
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTG.............................................................................	25	2	114.00	228	0	0	10	0	3	0	3	0	0	1	0	0	3	1	2	2	0	1	1	1	6	1	2	10	3	6	11	10	11	6	5	16	11	8	7	10	6	6	11	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	2	2	0	1	0	0	0	0	13	1	4	7	12	7	0	0	0	1	0
...............................................................................................................................................................ATATCACAGCCATTTTGACGAGTT...............................................................................	24	2	103.00	206	0	0	175	6	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	6	0	0	1	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	6	3	0	0	1	0	0	0	0	0	0	0	0	0	0	2
................................................................................................................................................................TATCACAGCCATTTTGACGAGTCA..............................................................................	24	2	96.00	192	0	0	12	0	10	2	2	0	0	0	0	1	0	1	0	0	0	0	1	0	7	0	0	9	10	4	2	2	3	6	2	14	5	4	8	26	14	16	9	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	2	0	0	1	0	0	2	1	0	2	0	0	2	0	0	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAA.............................................................................	24	2	91.00	182	0	0	70	2	0	0	3	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	1	6	5	12	3	1	0	0	0	13	2	6	20	12	10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	1	1	0	0	0	0	0	0	0	1	0	0	2	1
................................................................................................................................................................TATCACAGCCATTTTGACGAA.................................................................................	21	2	90.00	180	0	1	25	4	0	1	0	2	0	0	0	0	0	0	1	0	1	3	1	2	1	0	2	0	3	3	7	2	3	5	2	5	1	1	3	5	8	5	5	1	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	13	6	0	0	3	7	9	12	1	0	2	0	0	0	10	0	2	4	5
................................................................................................................................................................TATCACAGCCATTTTGACGAGTG...............................................................................	23	2	86.50	173	0	0	33	13	10	0	2	0	0	0	0	0	0	0	2	0	0	0	0	1	2	0	1	5	5	0	4	0	4	1	2	8	2	3	4	4	6	1	7	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	19	4	0	1	4	0	3	0	6	2	3	0	2	2	0	0	0	0	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTC..............................................................................	23	2	84.00	168	0	0	117	8	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	1	1	0	1	1	12	5	0	9	0	1	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................ATATCACAGCCATTTTGACGAGT................................................................................	23	2	83.50	167	0	0	156	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	4	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................TCGTTAAAATGCCTGTGACCTTAT.......................................................................................................................	24	1	75.00	75	0	0	2	23	0	0	0	0	0	0	0	0	0	0	7	1	0	10	5	2	0	0	8	0	0	0	0	0	2	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	1	0	0	0	1	0	0	0	0	2	1	0	2
................................................................................................................................................................TATCACAGCCATTTTGACGAGTCC..............................................................................	24	2	73.50	147	0	0	11	0	4	3	4	0	0	0	0	1	0	0	0	2	0	1	0	0	18	0	1	8	0	0	2	1	12	5	6	20	0	17	0	0	0	0	6	22	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAAT............................................................................	26	2	70.50	141	0	0	2	2	1	0	1	0	0	0	0	1	1	2	0	0	0	0	0	0	0	0	0	2	7	5	11	2	0	0	0	2	17	0	11	16	19	11	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	3	7	0	2	0	0	0	0	0	0	0	1	0	0	1	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTC.............................................................................	25	3	64.00	192	0	0	4	0	4	5	4	1	0	0	0	1	0	0	2	0	0	0	2	1	13	2	1	7	2	4	5	5	37	16	8	27	2	12	0	4	1	2	0	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	3	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCCC............................................................................	26	3	61.00	183	0	0	8	0	4	6	2	0	0	0	0	0	0	0	0	0	0	0	1	0	30	0	0	5	0	2	2	0	8	8	9	39	0	20	0	0	0	0	5	23	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	3	1	0	0	0	0	1	1	0	0	0	0	0	1	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGAA...............................................................................	23	2	54.50	109	0	0	11	3	1	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	4	0	2	2	2	1	0	4	2	0	1	0	6	2	3	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	20	14	2	0	0	0	0	0	0	4	5	3	7	3
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTGA.............................................................................	25	2	54.00	108	0	0	3	0	0	2	4	0	0	0	0	0	2	0	1	1	2	0	0	0	1	0	0	4	5	0	4	2	4	1	0	3	5	0	5	15	17	9	7	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	6	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAAC............................................................................	26	2	52.50	105	0	0	3	1	6	0	1	0	0	0	0	1	3	0	0	0	0	0	0	0	3	0	0	9	3	3	0	3	0	1	0	1	8	0	3	11	7	4	23	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	2	1	0	0	0	0	0	0	0	0	3	1	2	0
................................................................................................................................................................TATCACAGCCATTTTGACGAC.................................................................................	21	2	52.00	104	3	20	1	34	0	0	0	0	0	0	0	1	0	0	1	2	0	1	0	0	1	2	0	1	2	2	0	0	1	1	1	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	1	0	0	0	4	1	6	0	1	1	0	1	0	4	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAAA................................................................................	22	2	47.00	94	0	0	15	1	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	3	0	3	2	2	1	0	1	0	0	1	0	5	3	5	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	3	0	0	3	12	6	7	0	0	0	0	0	0	3	1	3	5	5
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAC.............................................................................	25	3	42.67	128	0	0	5	0	8	0	4	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	21	5	2	6	4	0	0	0	1	7	3	1	15	12	4	20	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	3	1	1	0	0	0	0	0	0	1	0	0	0	0
.......................................................................................................................TCGTTAAAATGCCTGTGACCTTA........................................................................................................................	23	1	37.00	37	0	0	0	7	0	0	0	0	0	0	0	0	0	0	1	0	1	2	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2	2	2	1	0	2	2	2	0	0	0	4	0	0	0	1	0	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	2	0	0	0
......................................................................................................................................................................AGCCATTTTGACGAGTTAA.............................................................................	19	2	36.00	72	0	0	1	0	0	1	0	0	0	0	0	2	4	7	0	0	0	0	0	0	1	0	0	4	2	2	4	2	0	0	0	0	4	1	4	15	7	6	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTCC............................................................................	26	3	35.33	106	0	0	3	0	1	4	1	0	0	0	0	0	0	0	0	1	1	0	1	0	8	0	0	0	1	0	0	0	16	13	10	25	0	10	0	0	0	0	0	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGATC................................................................................	22	2	34.00	68	0	0	0	10	0	0	0	1	0	0	0	0	0	0	1	1	0	1	0	0	3	2	3	1	0	0	1	0	0	0	0	3	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	6	0	0	9	19	1	0	0	0	0	0	0	0	0	0	0	0	0	1
..................................................................................................................................................................TCACAGCCATTTTGACGAG.................................................................................	19	2	33.50	67	0	0	53	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	1	0	1	0	2	3	1	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTAG..............................................................................	24	2	30.00	60	0	0	2	0	1	0	0	0	0	1	0	0	1	2	1	0	0	0	0	0	0	0	0	2	3	0	1	0	4	2	2	5	2	0	2	3	1	2	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	5	1	2	0	0	0	0	0	0	4	1	0	2	3
.................................................................................................................................................................ATCACAGCCATTTTGACGA..................................................................................	19	2	29.50	59	0	0	53	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................ATATCACAGCCATTTTGACGAG.................................................................................	22	2	29.00	58	0	0	41	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	1	0	0	2	0	1	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	1	0	0	0	0	0	0	0	0	0	1	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTCAA.............................................................................	25	2	28.00	56	0	0	0	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	3	4	0	2	2	0	0	0	0	5	1	5	8	5	10	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

GT----GTCACTGGA------------T---TATCCACCT-------------------------CAAT--CTCCATCTTCATTTGCATTC----GAATTGCAATTTTCTTATACCATGTCGTTAAAATGTCTGTGACCGTATGT---ATT-CACTATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACAGAGC-TCGCGTTACGCGTCCGACATGTA------------------TG-TTGTACTA--	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
................................................................................................................................................................TATCACAGCCATTTTGACGAGT................................................................................	22	2	449045.00	898090	106929	83208	43552	54439	563754	46208
................................................................................................................................................................TATCACAGCCATTTTGACGAGTT...............................................................................	23	2	235172.50	470345	62353	14511	8728	11846	357862	15045
................................................................................................................................................................TATCACAGCCATTTTGACGAGC................................................................................	22	2	39283.50	78567	123	159	132	303	77786	64
................................................................................................................................................................TATCACAGCCATTTTGACGAG.................................................................................	21	2	29145.00	58290	19720	6522	1132	1505	28310	1101
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTT...............................................................................	22	2	21612.50	43225	8831	952	597	939	30649	1257
.................................................................................................................................................................ATCACAGCCATTTTGACGAGT................................................................................	21	2	12257.50	24515	10303	515	637	794	11291	975
................................................................................................................................................................TATCACAGCCATTTTGACGAGTC...............................................................................	23	2	10927.00	21854	232	37	59	89	21234	203
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA..............................................................................	24	2	6350.50	12701	1854	591	59	84	9936	177
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT..............................................................................	24	2	5397.00	10794	2144	384	613	889	4855	1909
.......................................................................................................................TCGTTAAAATGTCTGTGACCGTATG......................................................................................................................	25	1	2362.00	2362	7	114	3	16	2215	7
................................................................................................................................................................TATCACAGCCATTTTGACGAGTA...............................................................................	23	2	1668.00	3336	313	179	40	40	2709	55
................................................................................................................................................................TATCACAGCCATTTTGACGA..................................................................................	20	2	1504.00	3008	1423	289	145	162	869	120
.................................................................................................................................................................ATCACAGCCATTTTGACGAG.................................................................................	20	2	1321.00	2642	1929	81	33	27	551	21
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA.............................................................................	25	2	1306.00	2612	657	252	3	9	1650	41
................................................................................................................................................................TATCACAGCCATTTTGACGAGTAA..............................................................................	24	2	1299.00	2598	495	140	8	8	1916	31
....................................................................................................................................................................ACAGCCATTTTGACGAGT................................................................................	18	2	1297.50	2595	69	940	445	635	486	20
................................................................................................................................................................TATCACAGCCATTTTGACGAGA................................................................................	22	2	1193.50	2387	396	121	52	95	1669	54
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA..............................................................................	23	2	1158.00	2316	375	100	7	6	1811	17
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTC..............................................................................	24	2	1127.00	2254	685	18	130	173	555	693
..................................................................................................................................................................TCACAGCCATTTTGACGAGT................................................................................	20	2	1065.50	2131	495	28	10	24	1563	11
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTC...............................................................................	22	2	945.00	1890	30	2	1	2	1853	2
..................................................................................................................................................................TCACAGCCATTTTGACGAGTT...............................................................................	21	2	877.50	1755	507	7	5	2	1230	4
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTT..............................................................................	23	2	822.50	1645	435	39	97	142	620	312
.................................................................................................................................................................ATCACAGCCATTTTGACGAGC................................................................................	21	2	765.00	1530	10	0	0	3	1516	1
................................................................................................................................................................TATCACAGCCATTTTGACGAC.................................................................................	21	2	533.50	1067	1	2	1	1	1062	0
...................................................................................................................................................................CACAGCCATTTTGACGAGT................................................................................	19	2	444.50	889	124	9	4	2	742	8
....................................................................................................................................................................ACAGCCATTTTGACGAGTT...............................................................................	19	2	438.00	876	55	123	116	134	443	5
...................................................................................................................................................................CACAGCCATTTTGACGAGTT...............................................................................	20	2	429.00	858	106	2	0	0	747	3
................................................................................................................................................................TATCACAGCCATTTTGACGAGG................................................................................	22	2	391.50	783	81	210	76	78	321	17
................................................................................................................................................................TATCACAGCCATTTTGACGATC................................................................................	22	2	320.00	640	0	1	4	10	624	1
................................................................................................................................................................TATCACAGCCATTTTGACG...................................................................................	19	2	295.00	590	413	18	25	29	104	1
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAA.............................................................................	24	2	274.00	548	151	31	1	2	351	12
................................................................................................................................................................TATCACAGCCATTTTGACGAGTAAA.............................................................................	25	2	240.00	480	326	24	1	3	101	25
.....................................................................................................................................................................CAGCCATTTTGACGAGTT...............................................................................	18	2	198.00	396	48	0	0	2	346	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTG...............................................................................	23	2	165.00	330	37	7	4	10	270	2
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG..............................................................................	24	2	164.00	328	118	28	14	30	129	9
.......................................................................................................................TCGTTAAAATGTCTGTGACCGTA........................................................................................................................	23	1	147.00	147	3	8	0	4	131	1
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTC..............................................................................	23	2	144.50	289	113	4	18	25	68	61
.......................................................................................................................TCGTTAAAATGTCTGTGACCGTAT.......................................................................................................................	24	1	137.00	137	8	1	3	4	117	4
..................................................................................................................................................................TCACAGCCATTTTGACGAGC................................................................................	20	2	135.50	271	1	0	1	0	269	0
...............................................................................................................................................................ATATCACAGCCATTTTGACGAGT................................................................................	23	2	108.50	217	146	6	2	0	62	1
...............................................................................................................................................................ATATCACAGCCATTTTGACGAGTT...............................................................................	24	2	75.00	150	79	1	2	1	65	2
..................................................................................................................................................................TCACAGCCATTTTGACGAG.................................................................................	19	2	72.50	145	87	2	0	1	55	0
...................................................................................................................................................................CACAGCCATTTTGACGAGC................................................................................	19	2	70.50	141	0	0	0	0	141	0
.................................................................................................................................................................ATCACAGCCATTTTGACGA..................................................................................	19	2	70.00	140	114	3	0	2	18	3
.......................................................................................................................TCGTTAAAATGTCTGTGACCGT.........................................................................................................................	22	1	68.00	68	7	1	1	11	39	9
.......................................................................................................................TCGTTAAAATGTCTGTGACCGTATT......................................................................................................................	25	1	60.00	60	0	36	3	2	18	1
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTA...............................................................................	22	2	60.00	120	32	2	0	1	83	2
................................................................................................................................................................TATCACAGCCATTTTGACGAA.................................................................................	21	2	59.50	119	34	4	7	5	66	3
....................................................................................................................................................................ACAGCCATTTTGACGAGC................................................................................	18	2	59.00	118	0	2	7	6	103	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTAA..............................................................................	23	2	55.50	111	55	3	0	0	51	2
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTT.............................................................................	25	2	53.50	107	45	1	2	5	36	18
................................................................................................................................................................TATCACAGCCATTTTGACGAAA................................................................................	22	2	53.00	106	47	4	0	0	54	1
...............................................................................................................................................................ATATCACAGCCATTTTGACGAG.................................................................................	22	2	53.00	106	28	14	1	1	62	0
................................................................................................................................................................TATCACAGCCATTTTGACGAAC................................................................................	22	2	53.00	106	0	0	1	0	105	0
................................................................................................................................................................TATCACAGCCATTTTGACGAT.................................................................................	21	2	50.50	101	10	2	14	6	65	4
..................................................................................................................................................................TCACAGCCATTTTGACGAGTC...............................................................................	21	2	47.50	95	0	0	0	0	95	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGA................................................................................	21	2	46.50	93	54	1	1	4	32	1
................................................................................................................................................................TATCACAGCCATTTTGAC....................................................................................	18	2	42.50	85	27	1	0	1	56	0
.......................................................................................................................TCGTTAAAATGTCTGTGACCGTATGT---..................................................................................................................	26	1	39.00	39	0	1	1	0	37	0

droGri2

GCCGGG------GCC------------G---GTTCGTGCAGTCGCCGCCTCCTCCTGTTCCTCCTCCTTCTCCTTTGT--GTGTTTC----------TTTCTTTCTTTCTTATACCATGTCGTTAAAATGCTTGTGACCTTATGT---ATT-TTATATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATGTCAACAGAAA-ACAG-------------AAAA---------A-AA------ATGCATTTACAA--	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
................................................................................................................................................................TATCACAGCCATTTTGACGAGTT...............................................................................	23	2	13424.50	26849	19940	6909
................................................................................................................................................................TATCACAGCCATTTTGACGAGT................................................................................	22	2	4680.50	9361	6510	2851
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT..............................................................................	24	2	1118.50	2237	1149	1088
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTT...............................................................................	22	2	891.00	1782	1779	3
................................................................................................................................................................TATCACAGCCATTTTGACGAG.................................................................................	21	2	423.00	846	795	51
.................................................................................................................................................................ATCACAGCCATTTTGACGAGT................................................................................	21	2	271.50	543	542	1
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA..............................................................................	24	2	90.00	180	104	76
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTT..............................................................................	23	2	60.00	120	120	0
................................................................................................................................................................TATCACAGCCATTTTGACG...................................................................................	19	2	56.50	113	113	0
..................................................................................................................................................................TCACAGCCATTTTGACGAGTT...............................................................................	21	2	41.50	83	83	0
................................................................................................................................................................TATCACAGCCATTTTGACGA..................................................................................	20	2	39.00	78	78	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAG.................................................................................	20	2	33.50	67	67	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTC...............................................................................	23	2	30.00	60	4	56
...............................................................................................................................................................ATATCACAGCCATTTTGACGAGTT...............................................................................	24	2	21.50	43	43	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTA...............................................................................	23	2	20.50	41	14	27
................................................................................................................................................................TATCACAGCCATTTTGACGAGTG...............................................................................	23	2	20.50	41	6	35
...................................................................................................................................................................CACAGCCATTTTGACGAGTT...............................................................................	20	2	17.50	35	33	2
....................................................................................................................................................................ACAGCCATTTTGACGAGTT...............................................................................	19	2	16.00	32	25	7
..................................................................................................................................................................TCACAGCCATTTTGACGAGT................................................................................	20	2	15.50	31	31	0
................................................................................................................................................................TATCACAGCCATTTTGAC....................................................................................	18	2	14.50	29	29	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG..............................................................................	24	2	14.50	29	26	3
...............................................................................................................................................................ATATCACAGCCATTTTGACGAGT................................................................................	23	2	12.00	24	24	0
.....................................................................................................................................................................CAGCCATTTTGACGAGTT...............................................................................	18	2	11.50	23	23	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTT.............................................................................	25	2	9.50	19	12	7
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA.............................................................................	25	2	9.00	18	9	9
....................................................................................................................................................................ACAGCCATTTTGACGAGT................................................................................	18	2	6.00	12	9	3
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTC..............................................................................	24	2	6.00	12	11	1
.................................................................................................................................................................ATCACAGCCATTTTGACG...................................................................................	18	2	6.00	12	12	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGA................................................................................	22	2	6.00	12	9	3
...................................................................................................................................................................CACAGCCATTTTGACGAGT................................................................................	19	2	5.00	10	10	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA..............................................................................	23	2	4.50	9	9	0
.................................................................................................................................................................ATCACAGCCATTTTGACGA..................................................................................	19	2	3.50	7	7	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTG.............................................................................	25	2	3.50	7	7	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGC................................................................................	22	2	3.50	7	4	3
................................................................................................................................................................TATCACAGCCATTTTGACGAGG................................................................................	22	2	3.00	6	6	0
..................................................................................................................................................................TCACAGCCATTTTGACGAGTTT..............................................................................	22	2	2.50	5	5	0
....................................................................................................................................................................ACAGCCATTTTGACGAGTTT..............................................................................	20	2	2.50	5	3	2
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTGG............................................................................	26	1	2.00	2	2	0
...............................................................................................................................................................ATATCACAGCCATTTTGACGAGTTT..............................................................................	25	2	1.50	3	3	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTA.............................................................................	25	2	1.50	3	3	0
........................................................................................................................CGTTAAAATGCTTGTGACCTT.........................................................................................................................	21	1	1.00	1	1	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTTGG............................................................................	25	1	1.00	1	1	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTGGCA..........................................................................	28	1	1.00	1	1	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTG..............................................................................	23	2	1.00	2	2	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTC..............................................................................	23	2	1.00	2	2	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTGA..............................................................................	24	2	1.00	2	0	2
.....................................................................................................................TGTCGTTAAAATGCTTGTGACC...........................................................................................................................	22	1	1.00	1	1	0
.....................................................................................................................TGTCGTTAAAATGCTTGTGAC............................................................................................................................	21	1	1.00	1	0	1
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTTT.............................................................................	24	2	1.00	2	2	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTGG..............................................................................	24	2	1.00	2	2	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTGGAC..........................................................................	28	1	1.00	1	1	0
...................................................................................................................................................................CACAGCCATTTTGACGAGTTT..............................................................................	21	2	1.00	2	2	0
...................................................................................................................................................................CACAGCCATTTTGACGAG.................................................................................	18	2	1.00	2	2	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTC.............................................................................	25	3	1.00	3	2	1
..................................................................................................................................................................TCACAGCCATTTTGACGAG.................................................................................	19	2	1.00	2	2	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCC.............................................................................	25	3	0.67	2	1	1
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTCC............................................................................	26	3	0.67	2	2	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTATC............................................................................	25	2	0.50	1	1	0
......................................................................................................................................................................AGCCATTTTGACGAGTTT..............................................................................	18	2	0.50	1	1	0
..................................................................................................................................................................TCACAGCCATTTTGACGAGTTG..............................................................................	22	2	0.50	1	1	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGA................................................................................	21	2	0.50	1	1	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTTT............................................................................	26	2	0.50	1	0	1
..............................................................................................................................................................CATATCACAGCCATTTTGACGAGT................................................................................	24	2	0.50	1	1	0
..................................................................................................................................................................TCACAGCCATTTTGACGAGTA...............................................................................	21	2	0.50	1	1	0
................................................................................................................................................................TATCACAGCCATTTTGACGAT.................................................................................	21	2	0.50	1	0	1
..............................................................................................................................................................CATATCACAGCCATTTTGACGAGTTT..............................................................................	26	2	0.50	1	1	0
...............................................................................................................................................................ATATCACAGCCATTTTGACG...................................................................................	20	2	0.50	1	1	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTGT.............................................................................	25	2	0.50	1	1	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAT.............................................................................	25	2	0.50	1	1	0
................................................................................................................................................................TATCACAGCCATTTTGACGAA.................................................................................	21	2	0.50	1	1	0
..................................................................................................................................................................TCACAGCCATTTTGACGAGTTA..............................................................................	22	2	0.50	1	1	0

droAna3

GGCGCG-GC--GGCA------------G-----------------------------------------------GATGTCATAACCGATT----GTG-TTCATCTTTCTTATACCATGTCGTTAAAAGGCTTGTGACCTTATGT---ATTTCGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCACCATTCG-ACGC-------------CCC----------------------------------	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
................................................................................................................................................................TATCACAGCCATTTTGACGAGT................................................................................	22	2	204663.50	409327	5621	45080	7608	22283	10030	318705
................................................................................................................................................................TATCACAGCCATTTTGACGAGTT...............................................................................	23	2	75484.50	150969	13600	84937	3554	9362	11117	28399
................................................................................................................................................................TATCACAGCCATTTTGACGAG.................................................................................	21	2	13410.50	26821	1074	2548	656	504	262	21777
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA..............................................................................	24	2	10459.00	20918	354	19432	746	92	94	200
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA.............................................................................	25	2	5920.50	11841	158	11172	484	8	11	8
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT..............................................................................	24	2	5866.00	11732	948	1742	112	1150	2550	5230
................................................................................................................................................................TATCACAGCCATTTTGACGAGC................................................................................	22	2	4151.50	8303	7	7493	38	230	17	518
................................................................................................................................................................TATCACAGCCATTTTGACGAGTC...............................................................................	23	2	2918.00	5836	6	5746	10	37	5	32
................................................................................................................................................................TATCACAGCCATTTTGACGA..................................................................................	20	2	1430.50	2861	104	207	48	78	25	2399
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAAA............................................................................	26	2	1315.50	2631	54	2451	124	1	1	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTT...............................................................................	22	2	948.00	1896	1084	753	6	9	13	31
.................................................................................................................................................................ATCACAGCCATTTTGACGAGT................................................................................	21	2	490.00	980	411	357	7	10	7	188
................................................................................................................................................................TATCACAGCCATTTTGACGAGA................................................................................	22	2	457.50	915	31	179	30	58	5	612
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG..............................................................................	24	2	316.00	632	32	186	32	38	8	336
................................................................................................................................................................TATCACAGCCATTTTGACG...................................................................................	19	2	277.50	555	61	28	7	17	1	441
................................................................................................................................................................TATCACAGCCATTTTGACGAGTA...............................................................................	23	2	255.50	511	17	296	15	29	10	144
................................................................................................................................................................TATCACAGCCATTTTGACGAGTAA..............................................................................	24	2	228.00	456	3	409	14	5	3	22
....................................................................................................................................................................ACAGCCATTTTGACGAGT................................................................................	18	2	212.50	425	4	26	71	241	0	83
................................................................................................................................................................TATCACAGCCATTTTGACGAT.................................................................................	21	2	180.00	360	0	7	4	2	4	343
................................................................................................................................................................TATCACAGCCATTTTGACGAGG................................................................................	22	2	159.50	319	24	33	29	72	1	160
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTC..............................................................................	24	2	133.50	267	17	175	9	12	20	34
..................................................................................................................................................................TCACAGCCATTTTGACGAGTT...............................................................................	21	2	122.00	244	46	178	3	3	1	13
....................................................................................................................................................................ACAGCCATTTTGACGAGTT...............................................................................	19	2	116.00	232	8	81	33	99	3	8
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA..............................................................................	23	2	107.00	214	24	189	1	0	0	0
..................................................................................................................................................................TCACAGCCATTTTGACGAGT................................................................................	20	2	104.00	208	7	69	2	9	6	115
................................................................................................................................................................TATCACAGCCATTTTGACGAC.................................................................................	21	2	86.50	173	0	116	0	3	2	52
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTT.............................................................................	25	2	80.50	161	29	10	1	33	41	47
................................................................................................................................................................TATCACAGCCATTTTGACGAGTG...............................................................................	23	2	76.00	152	3	77	1	12	1	58
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAA.............................................................................	24	2	65.50	131	11	120	0	0	0	0
...................................................................................................................................................................CACAGCCATTTTGACGAGTT...............................................................................	20	2	64.50	129	11	107	0	3	5	3
................................................................................................................................................................TATCACAGCCATTTTGACGAA.................................................................................	21	2	64.00	128	1	5	1	7	1	113
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTT..............................................................................	23	2	59.50	119	85	24	0	1	2	7
...................................................................................................................................................................CACAGCCATTTTGACGAGT................................................................................	19	2	56.00	112	5	49	3	1	7	47
.................................................................................................................................................................ATCACAGCCATTTTGACGAG.................................................................................	20	2	51.50	103	80	14	0	1	0	8
................................................................................................................................................................TATCACAGCCATTTTGACGAGTAAA.............................................................................	25	2	36.50	73	4	67	1	0	0	1
.................................................................................................................................................................ATCACAGCCATTTTGACGAGC................................................................................	21	2	33.50	67	0	65	0	1	1	0
.......................................................................................................................TCGTTAAAAGGCTTGTGACCT..........................................................................................................................	21	1	33.00	33	0	2	1	6	1	23
.....................................................................................................................................................................CAGCCATTTTGACGAGTT...............................................................................	18	2	30.50	61	8	51	0	0	0	2
................................................................................................................................................................TATCACAGCCATTTTGACGATC................................................................................	22	2	30.00	60	0	51	0	6	0	3
.......................................................................................................................TCGTTAAAAGGCTTGTGACCTTATG......................................................................................................................	25	1	29.00	29	1	0	0	4	0	24
................................................................................................................................................................TATCACAGCCATTTTGACGT..................................................................................	20	2	26.00	52	2	1	0	2	8	39
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTC...............................................................................	22	2	25.50	51	0	51	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTAA............................................................................	26	2	23.50	47	2	41	4	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTA.............................................................................	25	2	23.50	47	1	34	2	3	3	4
..................................................................................................................................................................TCACAGCCATTTTGACGAGTTA..............................................................................	22	2	20.00	40	3	37	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTAAA...........................................................................	27	2	18.00	36	1	35	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAT.............................................................................	25	2	18.00	36	2	26	2	5	1	0
...................................................................................................................................................................CACAGCCATTTTGACGAGTTA..............................................................................	21	2	16.50	33	1	32	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTG.............................................................................	25	2	16.50	33	4	2	2	2	3	20
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCA.............................................................................	25	2	15.50	31	0	7	15	0	2	7
..................................................................................................................................................................TCACAGCCATTTTGACGAGTTAA.............................................................................	23	2	15.50	31	2	29	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGAC....................................................................................	18	2	14.00	28	6	17	0	3	0	2
.......................................................................................................................TCGTTAAAAGGCTTGTGACCTT.........................................................................................................................	22	1	14.00	14	0	3	0	3	0	8
....................................................................................................................................................................ACAGCCATTTTGACGAGTTA..............................................................................	20	2	13.50	27	0	21	5	1	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGAC...............................................................................	23	2	13.50	27	0	26	1	0	0	0
...................................................................................................................................................................CACAGCCATTTTGACGAGTTAA.............................................................................	22	2	13.00	26	0	26	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGCC...............................................................................	23	2	12.50	25	0	23	1	1	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAC.............................................................................	25	3	11.67	35	1	26	5	1	2	0

droBip1

GC----GGCAGGC--------------------------------------------------------------GATTTCGTAACCGATT----GT--TCCGTCTTTCTTATACCATGTCGTTGAAAGGCTTGTGACCTTATGT---AGTTCGCAATCATATCACAGCCATTTTGACGAGTTTGGGCAAAGAAATGTCACCAT----------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droKik1

GCCAG---------------------AAGGAG------TA--------------------------------C--CGCTTCGCAA---ATC----AAATCGCTTCTTTCTTATACCATGTCGTTAAAATGCTTGTGACCTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACGTTGG-GCGC-------------CATTTTCCA----G-A-------ATT-CTTTACAG--	Size	Hit Count	Total Norm	Total
No Reads

droFic1

GT-----------------------------------------------------------------------------------------------ATCCCATCTTTCTTATACCATGTCGTTAAAATGTTTGTGACCTTATGT---ATC-CACAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACATTGG-GCGC-------------CATTTCTTC----G-A--G----TTTCTTTTTCAA--	Size	Hit Count	Total Norm	Total
No Reads

droEle1

GACA----T-----------------AA-------------------------------------------ATCAGTTTTTATAAGCGCTT----GCTTCGCATCTTTCTTATACCATGTCGTTAAAATGCTTGTGACCTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACATTTA-GGG---------------------------A-A-------GTT-CGTTTCAC--	Size	Hit Count	Total Norm	Total
No Reads

droRho1

GCTGG--G----C------T-----AAA-------------------------------------------ATCAAGTTTCATAAGCGATT----GCATCCCATCTTTCTTATACCATGTCGTTAAAATGTTTGTGACCTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACAGTGG-GCGC-------------CATTTATGG----A-A-GTTCAGATT-CATTTCAG--	Size	Hit Count	Total Norm	Total
No Reads

droBia1

GC--------------------------------------------------------------------------ATTTCGCAACCGTTC----GACTCGCATCTTTCTTATACCATGTCGTTAAAATGCTTGTGACCTTATGT---GTT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACATTGG-GCGC-------------CAATTAT------G-A-------GTT-ACTTTCAG--	Size	Hit Count	Total Norm	Total
No Reads

droTak1

GCTGG--GCA--C------T-----AAA-------------------------------------------ATCATATTTCGTGACCGTTC----GTATCGCATCTTTCTTATACCATGTCGTTAAAATGTTTGTGACCTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACGTTGG-GCGC-------------CATTTATTA----GTA-------GTTACTTTTAAA--	Size	Hit Count	Total Norm	Total
No Reads

droEug1

TA-----------------------------------------------------------------------------------------------TTCGCATCTTTCTTATACCATGTCGTTAAAATGTTTGTGACCTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACATTCGAGCGC-------------CATTTATGA----G-A-------GTT-ACTTTCAG--	Size	Hit Count	Total Norm	Total
No Reads

dm3

GC----GGCAGCGGA--TCA-----AAA-------------------------------------------AACATATTTCATAACCGACTGACTGAACCACGTCTTTCTTATACCATGTCGTTAAAATGTTTGTGAACTTATGT---ATT-CACAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACATTGA-ACGG-------------------------------------AT-CTATCCTG--	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
................................................................................................................................................................TATCACAGCCATTTTGACGAGTT...............................................................................	23	2	5329820.50	10659641	35	0	13	0	177	113	162	128	172	163	108	142	107	521	228	8	2	616	37	0	3920	6832	3506	3539	6	150	28371	30	249	293	7764	8133	60	51	397	8994	15061	16830	7002	10432	3335	24305	41425	11737	5073	22962	15996	17196	34330	38938	40321	23287	11886	272	10804	310	506	400	114	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10998	11511	8766	8907	227	3805	771	4107	2479	2821	8378	6644	420	534	2528	1073	299	1188	1281	2769	3228	187	51	3374	4654	4108	298	12234	17841	33685	36080	5290	7137	664	1222	1534	671	2563	3649	117	5519	1910	41	804	5	1073	1186	6286	98	3778	356	8205	4617	1	5	2	7	203	295	235	143	877	3	1706	14486	15500	16404	13331	14490	48208	29691	37953	21926	20723	24392	38465	48083	23163	28	36	44	2	10	29582	4250	13673	5671	8934	5514	11762	14815	0	10052	75	34	7534	9048	323	8284	273	12932	378	17643	1107	573	6765	11169	19499	103	25626	9668	35294	11055	24519	184	188	254	7859	1634	15627	11296	6	7	5	9	5	18744	26705	89	54	320	79	26	45	47967	29912	20221	27872	43883	10616	6815	19827	11544	93736	91068	19415	6240	7912	58299	62679	356	222	84093	6	10	0	0	9148	9344	1043	14496	9874	19889	22654	9345	26808	5576	6423	21243	6796	19177	34758	8998	19873	15835	4001	41324	19125	39760	50128	19991	46980	45061	29690	111242	32211	71665	87282	38510	32371	18803	207759	632528	195097	624235	233369	814858	229413	808411	45767	23257	58867	9667	58805	26074	27597	23894	27715	44287	37211	13268	12620	52252	7717	213469	416257	69445	161058	15814	50447	15929	10546	7452	299359	130988	148443	235837	210935	61609	209459	77129	12513	56829	86863	67213	57562	72589	5513	12469	32281	14860	19894	45062	34864	25434	57659	65905	187033	137212	85487	2215
................................................................................................................................................................TATCACAGCCATTTTGACGAGT................................................................................	22	2	2695721.00	5391442	0	0	2	0	353	68	84	105	109	206	45	121	32	146	566	13	4	360	96	0	1076	1879	6817	1454	0	322	22562	21	167	295	9104	8930	51	40	1044	5171	5685	9797	4304	5071	1401	8212	12747	5376	2721	6905	3691	5079	10152	13014	13457	7427	3989	1733	37972	404	57	22	46	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3921	4035	3251	3098	1001	2480	762	2972	3554	1871	2519	2606	241	380	895	2497	185	1080	2131	1156	3366	204	144	1967	2231	12022	191	3774	6877	12643	13751	2962	3911	346	1072	1633	1002	862	2458	344	5530	6796	65	1742	21	1425	5687	30727	511	4789	474	8704	4830	1	3	28	46	58	51	42	23	190	7	5737	12249	17683	24060	12522	7297	12919	11894	9989	9799	12837	11488	15585	15359	8393	10	6	15	1	3	8547	3481	6007	9716	4433	3068	12982	15578	0	10768	48	25	6872	10679	330	10032	199	13142	187	18245	835	234	4010	5287	59579	383	24280	3802	11638	4981	5781	104	17	24	3888	344	8975	5553	0	1	0	0	1	6199	13989	35	9	204	23	2	7	25049	20970	16690	24053	28573	6378	6453	3456	3271	13050	13765	3667	2006	1366	16044	8068	67	76	10713	9	7	0	0	7453	8898	1062	9297	26966	14544	12504	5214	13175	8166	16824	12953	8311	17584	22534	7202	18603	13085	16655	18730	9279	18436	18044	6393	26836	15107	17256	47787	9070	26687	32129	12649	13583	7212	71424	221163	62463	202858	73147	258336	56251	198981	23442	14449	19645	2631	28363	44782	43509	34359	48151	26871	34589	6140	4072	13030	3556	61187	122894	19745	47410	12953	16047	10235	9439	6755	181964	185838	40307	62177	247017	34722	112375	47767	5665	30488	47241	42203	26445	52840	3545	13824	109421	17049	17242	38046	28401	24832	44630	101982	232791	126969	105278	527
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA..............................................................................	24	2	232729.50	465459	0	0	0	0	10	6	52	53	37	17	0	6	1	7	5	1	0	7	0	0	264	754	195	8	0	3	400	0	0	0	0	0	0	0	310	549	503	1352	329	792	203	1733	1119	543	312	1427	396	1316	1995	1591	1226	1187	528	0	36	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	94	96	75	89	2	1079	432	523	418	1037	126	35	2	6	19	25	2	13	56	280	63	7	3	16	19	67	8	188	227	408	337	193	61	50	23	289	63	32	706	3	63	49	1	6	0	14	31	159	5	70	4	88	65	0	0	0	0	16	29	6	8	8	0	413	4098	4690	3192	3192	1762	3165	3326	2794	2194	313	1306	1918	2332	1237	0	0	0	0	0	298	45	147	174	139	57	174	275	0	152	0	1	133	139	2	117	5	200	5	257	4	32	52	146	694	3	419	945	3369	1016	3601	27	30	30	260	286	1466	1859	0	0	0	0	0	2973	5412	8	1	62	9	0	11	1279	751	380	1036	2110	436	54	917	555	2165	2003	1147	400	422	3405	151	1	0	211	92	36	0	0	683	610	9	385	52	189	155	49	302	48	74	117	157	125	847	120	237	159	42	294	272	255	475	92	331	488	488	628	178	634	880	238	481	248	14087	44870	11908	39576	14545	53077	10175	36912	641	194	808	130	275	198	172	189	175	7121	1944	127	171	206	452	12035	23298	4490	10352	172	515	213	116	104	2788	7992	12265	20386	1123	540	913	875	95	299	735	604	689	654	32	166	403	211	920	2538	1464	1169	274	384	850	741	1162	12
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT..............................................................................	24	2	163347.50	326695	0	0	1	0	1	0	1	0	2	1	1	4	3	10	13	0	0	25	0	0	46	124	117	4	0	9	2627	0	10	9	237	242	5	3	8	168	180	233	69	137	50	366	682	138	84	303	343	302	654	596	623	345	144	0	1	0	151	124	28	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	314	304	259	265	3	59	14	31	16	32	163	83	1	5	33	20	7	15	78	61	74	1	0	21	28	43	8	284	283	490	392	52	76	15	10	13	0	34	54	6	116	45	2	28	1	30	82	385	6	123	15	210	129	0	0	0	0	0	0	3	0	9	0	55	678	660	554	441	520	1111	1036	1056	689	1146	438	713	955	396	0	1	2	0	0	1081	207	507	1346	601	279	306	424	0	295	2	0	320	276	9	256	10	516	14	709	25	36	191	669	4598	7	968	1322	549	1290	700	12	2	9	408	60	2167	538	0	0	0	0	0	523	672	6	6	10	9	2	0	4879	3098	2015	569	2081	367	203	210	191	853	835	195	103	100	646	460	2	0	715	4	1	0	0	132	122	71	300	333	1406	484	169	636	207	456	441	207	669	1251	474	431	411	143	1328	715	1515	824	244	893	957	1024	3407	517	1689	2036	788	795	563	3837	11905	5986	19390	5151	18490	4269	14868	1943	1172	2095	248	2535	1585	1081	1310	1293	1125	539	526	414	2591	526	3775	6974	1813	4076	927	3230	1296	594	308	14226	3003	3133	7822	5722	3483	9440	4357	545	2824	4226	3404	3174	2801	296	2051	4105	1700	1123	1415	1430	1392	4352	3553	9866	5745	6012	15
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA.............................................................................	25	2	121067.00	242134	0	0	0	0	3	3	108	93	35	9	0	0	0	1	1	0	0	0	0	0	134	440	121	0	0	0	2	0	0	0	0	0	0	0	545	254	165	728	106	300	60	998	481	183	73	604	89	412	721	449	239	283	122	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	16	7	5	7	0	2071	921	635	471	1924	21	2	1	1	1	14	0	7	15	191	17	2	2	5	21	57	2	23	66	95	275	281	7	42	4	482	45	11	1345	0	14	5	0	0	0	0	0	2	0	9	0	17	2	0	0	0	0	5	23	4	4	10	0	358	3991	4320	2301	2236	1367	912	2522	914	1495	59	513	542	796	359	0	0	0	0	0	48	0	6	10	23	0	26	44	0	31	0	0	12	18	1	19	0	22	0	36	0	17	7	47	49	0	32	234	1776	188	1727	19	2	4	65	72	158	379	0	0	0	0	0	1904	4625	2	5	32	4	1	15	115	88	39	207	251	109	2	656	272	1214	717	799	414	330	3128	51	0	0	58	1	0	0	0	296	238	2	77	2	14	14	4	20	10	17	10	50	11	189	10	29	16	14	26	34	21	62	6	28	62	97	48	18	62	128	20	64	38	8927	28734	7020	23635	8697	32088	3025	10868	76	41	118	23	22	17	17	18	16	7053	913	22	46	27	729	3710	7293	2101	5081	13	47	30	19	4	189	3997	6424	13907	110	57	74	93	27	14	95	114	73	106	6	34	50	27	796	1891	839	965	30	30	50	49	175	0
................................................................................................................................................................TATCACAGCCATTTTGACGAG.................................................................................	21	2	106682.00	213364	0	0	0	0	96	16	17	25	10	27	2	7	6	13	89	0	0	59	10	0	48	100	292	134	0	14	363	7	59	83	1189	1086	5	9	5127	212	262	423	213	270	110	367	553	261	210	257	51	201	271	709	426	245	148	564	4612	65	55	47	27	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	569	547	456	445	306	224	124	119	250	492	311	361	28	23	71	512	15	93	1240	273	578	28	26	99	151	2622	42	617	1034	1408	1736	551	510	55	67	154	71	162	494	23	211	463	1	91	1	68	162	626	18	268	39	439	248	5	1	13	5	9	17	4	4	24	2	777	499	516	499	437	277	403	393	274	369	509	320	365	271	196	3	0	3	0	0	324	385	442	178	628	243	766	871	0	528	20	8	551	1219	94	1277	66	655	61	815	109	3	962	796	804	31	1907	103	174	193	147	16	4	1	83	7	117	453	0	0	0	0	0	135	297	0	1	12	1	2	0	300	362	338	2018	1651	334	425	376	610	1296	1306	423	266	159	1640	1548	43	40	2900	8	2	0	0	113	138	57	511	1830	2190	1194	767	854	1596	5102	1755	1574	1185	1393	665	700	569	1440	597	475	608	444	157	926	599	817	2147	284	982	1268	834	592	256	1256	3771	809	2617	1235	4382	1005	3479	337	581	649	152	1623	2279	2047	2199	3011	411	217	74	37	237	137	1204	2576	326	660	199	217	148	147	4325	5452	2078	692	1021	9153	457	1540	521	97	712	715	860	292	1254	61	374	5624	449	326	910	790	663	965	6426	9753	4378	4121	11
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAAA............................................................................	26	2	60619.50	121239	0	0	0	0	0	0	35	11	2	2	0	0	0	0	0	0	0	0	0	0	24	127	65	0	0	0	0	0	0	0	0	0	0	0	0	112	43	370	29	100	11	359	135	84	15	245	15	145	213	83	43	83	25	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	2	0	0	317	168	39	14	492	0	0	0	0	0	1	0	0	4	22	0	0	0	0	0	14	0	2	1	1	66	71	0	7	0	56	5	1	262	0	0	3	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	3	14	0	0	2	0	86	1031	1606	850	777	490	215	1118	202	564	18	175	170	239	130	0	0	0	0	0	0	0	0	0	3	0	2	3	0	0	0	0	1	2	0	0	0	1	0	1	0	0	0	0	0	0	3	37	568	53	745	2	3	5	11	24	21	197	0	0	0	0	0	665	2208	0	3	11	0	0	0	1	0	2	40	15	19	2	471	141	1091	304	680	574	236	1993	2	0	0	8	0	0	0	0	29	20	0	37	1	0	1	0	1	0	0	1	21	0	8	0	0	1	4	0	0	2	3	0	0	0	2	3	0	4	1	0	5	2	4267	14784	4783	16670	6535	25236	1245	4150	2	3	3	1	0	1	0	2	0	914	44	2	5	5	309	1423	2770	881	2159	0	2	2	2	0	10	2195	2256	6540	4	1	1	3	1	0	1	3	0	6	0	2	2	3	372	879	246	572	2	3	2	5	14	4
....................................................................................................................................................................ACAGCCATTTTGACGAGTT...............................................................................	19	2	46892.00	93784	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	251	440	64	11	1	1	785	2	10	9	257	217	2	3	4	246	336	383	96	209	131	269	625	347	117	591	582	420	810	613	450	640	285	0	0	0	1	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	232	401	362	232	0	0	0	0	0	1	2	1	2	0	4	0	0	1	0	1	3	0	1	1	7	0	0	0	5	6	1	0	0	0	0	0	0	0	0	4	215	125	3	39	0	72	51	285	5	13	1	21	18	0	0	0	0	1	2	3	3	3	0	55	414	404	365	226	378	1235	904	915	663	475	605	674	776	448	4	1	5	0	1	319	32	98	115	141	39	347	429	0	230	1	2	183	284	13	295	11	35	0	41	0	2	54	92	178	0	95	241	773	138	307	5	2	7	155	14	69	59	0	0	0	0	0	203	546	5	1	0	0	0	0	141	190	85	399	295	217	261	234	141	1305	684	186	72	90	495	1	0	0	1	0	0	0	0	144	165	14	121	76	138	164	56	157	37	53	169	58	181	350	112	187	143	49	375	200	345	500	238	579	466	272	1366	432	772	863	409	250	245	3523	11219	3322	6890	3319	7025	3098	5951	607	70	126	7	379	194	232	127	161	160	237	17	29	297	26	308	1254	96	265	30	85	11	14	17	942	309	173	394	486	211	383	162	17	199	257	109	109	145	37	12	45	21	36	66	38	40	86	67	202	140	29	40
....................................................................................................................................................................ACAGCCATTTTGACGAGT................................................................................	18	2	17071.00	34142	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	43	70	117	4	1	8	386	1	3	7	254	243	1	2	0	142	146	230	77	142	63	81	153	153	88	229	155	141	218	175	149	218	109	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	82	187	177	73	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2	0	8	0	0	0	0	0	0	0	0	0	7	118	146	1	50	0	50	184	932	13	7	0	6	8	0	0	0	0	0	0	0	2	0	0	166	317	467	406	266	189	333	266	293	256	294	341	316	301	165	0	1	1	0	0	96	41	29	107	60	22	284	365	0	178	1	1	33	265	8	265	3	45	0	38	2	20	19	21	462	1	85	62	180	57	80	0	0	1	49	6	39	6	0	0	0	0	0	42	88	0	1	1	0	0	0	93	110	69	185	121	80	106	48	32	164	105	50	12	23	164	1	0	0	0	0	0	0	0	100	117	8	90	287	113	94	53	108	82	137	124	93	185	256	101	225	165	209	208	112	198	231	102	334	179	181	603	114	307	351	120	115	93	785	1546	969	1044	876	1096	661	833	263	48	46	1	158	359	320	228	378	94	188	9	7	70	5	55	361	23	88	9	18	12	14	5	271	263	40	76	681	133	188	100	6	118	126	65	54	93	18	18	135	25	20	74	39	27	58	120	284	52	21	5
................................................................................................................................................................TATCACAGCCATTTTGACGAGC................................................................................	22	2	14993.00	29986	0	0	0	0	4	0	1	1	0	4	0	3	0	4	8	0	0	1	3	0	7	4	107	3	0	0	82	0	0	0	0	0	0	0	0	3	29	11	29	5	25	63	85	6	12	11	32	5	127	115	135	8	95	6	105	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	7	8	12	13	13	1	7	10	7	12	7	12	0	0	31	0	2	7	2	4	0	0	2	6	21	2	13	42	35	30	4	2	0	1	1	4	5	9	0	19	20	0	8	0	12	30	160	4	23	1	39	17	0	0	0	0	0	1	0	0	1	0	12	36	44	94	45	11	39	48	27	29	38	70	46	83	50	0	0	0	0	0	41	13	11	36	63	4	171	160	0	135	0	0	48	34	2	31	0	107	6	117	11	2	14	14	239	2	358	10	21	14	13	0	0	0	8	0	8	6	0	0	0	0	0	19	31	1	0	0	1	0	0	230	128	85	50	36	14	22	1	3	10	38	2	2	1	11	9	0	0	15	2	1	0	0	15	20	19	17	88	152	67	58	58	31	72	42	31	60	136	32	189	137	43	158	50	96	44	37	126	59	168	153	31	104	77	54	45	11	403	2168	342	1743	273	1986	275	1425	167	334	532	171	779	342	298	258	247	87	74	19	14	151	34	1136	676	486	311	126	311	65	47	57	220	1514	64	86	888	219	260	313	16	122	276	188	162	232	7	41	338	32	43	88	87	38	132	369	816	265	461	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTT...............................................................................	22	2	14625.50	29251	0	0	0	0	2	0	2	1	1	2	0	0	0	3	0	0	0	0	1	0	7	10	3	10	0	0	108	1	0	0	0	0	0	0	0	12	17	18	10	13	7	34	78	24	8	60	61	19	61	54	60	27	26	15	93	0	9	8	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	56	66	44	53	2	9	0	6	5	7	26	14	2	1	6	6	0	2	1	6	8	2	0	6	18	15	0	27	73	108	97	15	24	4	2	3	0	6	11	1	10	1	0	2	0	6	5	12	0	4	0	1	2	0	0	0	0	0	0	2	3	0	0	3	11	23	13	37	14	78	28	56	20	28	42	49	73	51	0	0	0	0	0	87	5	72	1	38	58	38	36	0	18	1	1	7	23	0	23	0	21	0	33	8	0	20	15	24	0	57	9	28	14	15	0	0	1	10	4	16	1	0	0	0	0	0	20	24	0	0	0	0	0	0	69	48	52	55	61	10	16	20	9	60	118	21	12	6	48	121	4	1	152	0	0	0	0	15	18	1	59	6	39	34	15	61	8	7	48	10	71	61	14	34	40	6	103	38	29	73	25	45	53	36	202	44	120	171	49	61	32	683	5126	465	3222	390	3525	351	2808	212	44	91	13	64	31	44	30	39	75	87	28	17	132	4	247	944	72	296	23	49	29	13	31	928	83	337	387	294	91	368	153	14	50	143	121	95	107	11	16	42	17	18	49	27	30	62	186	410	296	282	38
................................................................................................................................................................TATCACAGCCATTTTGACGAGTC...............................................................................	23	2	13964.50	27929	0	0	0	0	5	0	2	1	3	1	9	10	1	11	1	0	0	1	0	0	2	5	3	8	0	0	23	0	0	0	0	0	0	0	2	3	9	6	41	24	8	25	41	5	4	18	31	4	47	40	64	7	51	1	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	1	5	4	3	12	1	5	3	3	3	2	31	1	3	7	0	2	1	3	4	0	0	1	6	9	1	14	47	40	39	11	10	0	1	4	1	3	19	0	10	4	0	6	0	1	3	18	0	5	1	22	7	0	0	0	0	1	0	0	0	1	0	0	3	12	25	13	4	33	18	24	11	17	27	26	36	26	0	0	0	0	0	44	1	10	14	23	4	25	31	0	17	0	0	49	8	0	10	0	19	1	37	7	1	6	8	15	0	211	12	39	11	17	0	0	0	10	0	14	3	0	0	0	0	0	19	39	0	0	1	0	0	0	51	21	20	48	34	27	6	5	2	17	38	3	0	4	17	20	1	0	47	10	3	0	0	15	18	3	36	20	32	24	10	40	10	15	42	12	34	48	12	38	42	10	82	17	66	55	16	49	42	27	121	32	67	77	27	54	21	543	5032	405	2586	483	4773	391	2977	107	67	171	18	143	54	89	60	121	84	165	34	25	85	29	1151	674	274	200	60	146	29	17	21	305	178	110	181	219	76	264	80	8	49	79	235	79	74	11	7	54	16	19	55	33	22	42	70	889	178	106	1
................................................................................................................................................................TATCACAGCCATTTTGACGA..................................................................................	20	2	11508.50	23017	0	0	0	0	2	1	1	0	0	0	0	1	0	1	2	0	0	10	0	0	2	10	14	13	0	1	64	3	67	19	155	147	15	16	2442	7	10	11	8	5	3	35	45	14	7	10	3	10	5	28	28	5	6	0	65	0	14	8	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	75	91	75	64	13	25	7	6	15	21	32	15	5	0	14	24	1	1	38	21	34	4	5	5	13	83	2	31	43	98	100	6	27	3	3	6	3	6	31	5	153	109	0	11	0	13	66	142	15	94	212	180	123	21	8	66	110	0	0	3	0	7	48	11	31	39	8	20	12	27	28	15	27	25	8	5	15	10	0	1	1	0	0	37	43	50	26	43	16	280	411	0	189	17	6	119	171	21	170	71	373	19	519	55	7	41	55	208	4	535	8	20	7	9	0	0	0	10	0	6	9	0	0	0	0	0	7	13	0	0	4	0	0	0	31	37	32	113	157	29	18	72	300	165	213	60	91	27	664	279	14	4	292	1	0	0	0	9	9	6	32	219	139	38	34	33	75	516	92	114	78	82	30	44	38	67	63	25	54	28	10	86	34	38	187	18	85	122	78	58	30	108	358	30	107	153	474	112	358	30	74	31	5	138	216	188	203	335	20	16	2	3	16	11	90	172	13	24	20	13	10	15	156	411	104	52	97	826	21	91	24	3	45	27	50	14	81	1	43	770	39	18	39	33	41	90	419	858	306	210	22
................................................................................................................................................................TATCACAGCCATTTTGACGAGA................................................................................	22	2	9927.50	19855	0	0	0	0	20	7	6	10	15	14	3	4	2	8	0	0	0	3	0	0	1	2	212	5	0	0	22	0	0	0	0	0	0	0	1	6	13	15	10	4	6	46	94	1	4	5	13	6	74	142	122	6	49	1	135	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	67	68	47	52	70	8	0	5	1	10	11	3	26	1	3	143	0	0	5	4	9	0	2	2	0	31	15	16	40	43	32	7	10	0	0	2	0	3	14	1	25	44	0	20	0	14	66	273	5	18	1	26	28	0	0	0	0	0	0	0	0	0	0	5	11	28	20	20	4	17	19	17	8	25	16	12	19	5	0	0	0	0	0	9	102	8	34	14	3	123	122	0	78	0	1	36	113	3	73	10	137	3	209	33	0	7	39	63	1	326	3	19	11	11	1	0	0	7	0	5	23	0	0	0	0	0	7	24	0	0	0	0	0	0	52	22	23	17	16	17	14	42	56	58	116	44	35	16	243	91	0	0	113	3	0	0	0	7	10	9	15	63	87	43	10	11	29	118	17	42	25	75	28	11	13	18	21	26	17	36	9	30	13	42	85	30	60	36	29	34	13	242	1505	125	504	229	2356	159	1231	25	43	36	15	105	165	124	162	123	44	18	8	3	20	27	445	312	221	150	34	73	19	18	52	468	2637	23	39	335	41	45	24	3	12	20	17	15	24	37	23	201	8	13	30	27	34	42	239	328	108	136	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTA...............................................................................	23	2	9840.00	19680	0	0	0	0	3	2	0	7	6	6	4	0	5	17	2	0	0	3	1	0	3	5	34	101	0	2	69	0	0	0	0	0	0	0	1	11	12	24	53	20	10	13	48	19	7	38	13	21	50	60	43	29	38	0	49	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	15	10	7	13	2	11	10	1	6	16	27	2	25	2	4	6	0	8	3	5	3	0	0	4	2	22	1	31	72	100	52	8	5	1	6	8	2	4	58	0	11	3	0	3	0	8	3	31	0	13	1	27	11	0	0	0	0	0	0	0	0	0	0	9	74	71	46	39	26	59	57	54	47	21	25	44	44	18	0	0	0	0	0	64	33	32	29	20	14	37	48	0	28	1	0	23	26	1	27	3	45	2	50	6	0	16	46	42	0	83	144	50	281	37	3	0	0	113	4	400	17	0	0	0	0	0	15	67	0	0	0	0	0	0	169	86	58	35	42	39	8	31	24	81	78	29	17	6	80	232	1	1	255	15	6	0	0	14	11	4	21	21	31	31	9	138	25	27	44	15	25	114	23	72	13	21	44	44	24	62	15	44	48	77	97	39	161	71	32	88	58	285	934	276	934	302	1086	236	962	172	44	203	23	41	86	79	85	76	96	47	23	8	17	14	712	447	109	189	52	54	47	31	53	838	1295	136	285	279	68	110	163	31	28	173	236	215	59	73	30	88	30	20	53	40	21	48	92	448	126	183	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGG................................................................................	22	2	9586.50	19173	0	0	0	0	1	0	0	0	1	2	0	0	0	1	0	0	0	0	0	0	1	0	7	2	0	1	18	0	0	0	0	0	0	0	0	1	15	2	12	0	9	5	40	0	5	4	18	3	135	35	21	10	53	5	221	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	9	3	7	0	4	0	4	4	2	3	3	28	1	0	1	1	0	1	2	6	1	0	1	3	22	0	3	32	29	34	11	15	0	4	5	0	0	6	0	8	17	0	3	0	10	7	74	0	16	2	19	24	0	0	0	0	0	0	0	0	0	0	9	44	47	58	16	22	20	17	21	26	20	45	28	40	12	0	0	0	0	0	19	2	3	18	2	4	75	96	0	71	0	0	10	56	2	11	2	417	5	448	5	0	4	20	372	6	152	4	9	6	24	0	0	0	0	0	19	13	0	0	0	0	0	8	17	0	0	2	0	0	0	46	27	24	16	32	4	18	3	3	4	56	3	2	2	15	17	0	0	32	0	0	0	0	22	21	4	11	75	92	38	6	29	49	63	53	37	47	60	12	38	34	52	32	33	49	38	12	48	26	26	102	22	55	97	18	30	18	842	1834	646	1389	631	2008	329	789	239	143	194	36	382	438	378	393	63	55	66	18	12	18	39	311	387	104	117	92	119	87	69	2	30	64	10	18	271	7	421	33	0	12	41	13	23	45	0	11	135	8	5	22	15	10	63	167	203	137	138	1
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTC..............................................................................	24	2	6114.50	12229	0	0	0	0	2	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	12	5	3	0	0	0	36	0	0	0	0	0	0	0	0	7	15	12	8	9	4	50	81	11	6	22	17	17	149	60	45	31	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	19	14	10	9	0	2	1	0	6	5	12	5	2	1	2	1	0	0	3	4	5	1	0	0	2	4	0	17	26	35	3	3	4	0	2	1	0	3	6	1	7	5	0	2	0	1	2	12	0	4	3	16	5	0	0	0	0	0	0	0	0	0	0	0	36	44	39	25	24	45	47	43	32	21	16	45	42	17	0	0	0	0	0	33	11	12	13	13	1	9	12	0	3	0	0	8	8	0	5	0	9	0	13	0	0	0	15	87	0	25	28	37	23	43	0	2	1	12	2	40	22	0	0	0	0	0	22	28	0	0	0	0	0	0	68	43	20	27	97	7	6	77	34	87	125	88	31	30	141	18	0	0	33	44	14	0	0	13	7	2	5	4	25	15	4	18	2	11	15	11	18	31	5	17	8	2	36	10	44	41	11	31	27	21	45	21	46	52	21	43	19	202	1059	267	1012	274	1240	199	731	58	15	60	2	41	24	22	17	26	94	47	5	5	35	18	345	365	139	182	15	68	18	9	6	147	95	112	256	204	47	112	66	3	43	91	43	54	55	2	17	33	21	14	41	32	19	37	56	148	144	173	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTAA..............................................................................	24	2	4432.00	8864	0	0	0	0	0	0	3	1	0	1	0	1	0	2	1	0	0	0	0	0	8	10	17	2	0	0	11	0	0	0	0	0	0	0	7	8	3	15	8	12	3	26	10	9	2	18	5	12	19	5	5	12	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	3	5	5	0	31	6	16	7	37	5	1	1	0	1	1	0	6	2	1	13	0	0	0	0	0	1	17	19	20	24	11	1	0	0	6	1	2	20	0	3	1	0	2	0	0	1	6	0	1	0	5	2	0	0	0	0	0	0	1	0	0	0	9	87	97	45	72	44	25	70	15	38	5	11	26	21	8	0	0	0	0	0	4	10	0	11	1	0	9	11	0	4	0	0	7	6	0	5	0	10	0	11	0	0	0	3	13	0	10	166	42	156	34	0	0	3	38	3	261	29	0	0	0	0	0	55	122	1	0	0	0	0	0	37	14	9	13	7	13	0	9	12	21	8	15	13	7	35	19	0	0	17	0	0	0	0	6	10	0	3	3	4	2	0	17	1	5	3	5	4	57	4	10	6	3	5	4	5	10	0	6	15	19	8	1	13	19	3	28	14	277	852	193	733	283	940	92	277	26	4	38	6	2	8	11	8	12	117	25	12	2	0	39	114	196	58	139	13	10	15	13	3	82	652	149	369	43	10	7	26	6	1	34	13	46	18	5	6	8	3	13	32	22	22	4	9	26	16	44	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTATC............................................................................	26	2	4348.00	8696	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	1	0	0	0	6827	1851	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	2	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGT................................................................................	21	2	4122.00	8244	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	8	0	0	2	0	4	3	0	1	156	0	0	0	0	0	0	0	2	4	2	6	1	4	2	5	21	4	5	14	11	4	6	4	7	7	10	43	154	0	1	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	15	21	10	18	1	8	0	16	5	5	2	5	0	2	0	2	0	2	9	2	5	0	0	4	2	41	0	19	20	29	34	10	7	0	0	0	1	4	1	0	5	3	0	3	0	1	2	7	0	2	0	1	1	0	0	0	0	0	0	0	0	0	0	3	14	8	0	5	2	9	9	9	7	14	6	3	5	12	0	0	0	0	0	41	0	36	6	19	13	14	13	0	8	0	0	8	18	1	21	0	7	0	8	4	0	4	12	110	0	33	4	8	7	4	2	1	0	10	0	5	12	0	0	0	0	0	2	3	0	0	1	0	0	0	38	32	28	24	18	5	6	4	3	8	11	2	1	2	6	20	0	0	20	0	0	0	0	3	5	0	22	13	42	10	4	11	5	3	12	6	26	33	11	17	18	9	26	13	25	16	5	20	6	16	63	11	26	51	13	17	13	167	1259	91	695	73	622	52	387	73	11	19	3	27	25	25	14	33	18	8	5	3	23	5	37	157	17	53	13	8	5	3	15	284	53	40	61	214	21	131	49	1	17	37	51	30	46	1	8	62	11	11	24	17	12	39	201	358	167	191	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTG...............................................................................	23	2	3925.00	7850	0	0	0	0	6	1	1	3	1	1	0	2	3	5	0	0	0	0	0	0	0	3	0	2	0	0	4	0	0	0	0	0	0	0	1	0	7	2	67	7	5	5	29	6	2	7	13	0	50	16	7	5	30	0	11	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	7	4	6	0	0	0	2	0	1	1	5	30	2	0	1	1	1	0	0	3	0	0	0	0	1	0	10	42	32	29	3	5	2	4	2	0	9	26	0	7	6	0	2	0	2	0	8	0	4	0	13	4	0	0	0	0	0	0	0	0	1	0	4	9	6	16	10	7	14	5	9	5	5	12	17	31	6	0	0	0	0	0	56	8	24	0	12	6	24	21	0	25	0	0	3	11	0	4	0	201	8	226	9	0	5	24	22	0	63	5	13	5	11	0	0	0	2	0	15	7	0	0	0	0	0	5	6	0	0	0	0	0	0	7	5	4	35	5	55	8	0	1	1	10	1	0	1	3	8	0	0	4	0	0	0	0	3	7	0	1	8	15	8	6	14	3	4	9	3	4	17	2	4	1	0	8	4	4	14	2	11	6	14	32	5	18	11	22	13	8	517	229	369	275	436	342	381	322	94	103	213	78	242	71	76	132	8	5	6	2	6	16	39	326	97	225	42	15	107	22	13	10	9	24	7	10	10	2	8	4	2	2	6	176	6	2	1	0	4	3	1	2	2	1	5	10	710	18	16	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG..............................................................................	24	2	3487.50	6975	0	0	0	0	0	0	0	2	2	0	0	0	1	4	2	0	0	0	0	0	6	6	3	0	0	1	7	0	0	0	0	0	0	0	1	18	28	39	7	22	7	21	22	15	5	17	8	20	26	18	13	14	6	0	15	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	4	2	3	1	5	1	1	0	4	3	1	0	0	0	1	0	0	2	0	0	0	0	0	0	7	0	2	8	5	4	1	5	0	2	0	0	1	13	0	1	1	0	0	0	1	2	2	0	0	0	1	2	0	0	0	0	0	0	2	1	0	0	25	90	83	57	40	23	16	39	27	29	13	17	6	7	6	0	0	0	0	0	2	0	7	3	0	0	4	3	0	1	0	0	5	8	1	15	0	18	5	23	1	0	0	0	63	0	13	16	19	10	14	0	0	0	3	3	9	23	0	0	0	0	0	24	40	0	0	3	0	0	0	17	14	13	61	88	9	8	40	27	77	86	37	24	19	151	34	0	0	28	0	0	0	0	2	8	0	10	15	19	17	5	19	8	42	16	14	17	29	9	7	8	6	12	10	23	26	5	19	17	44	39	11	52	44	9	30	9	137	440	127	373	149	509	118	317	32	31	33	19	32	26	14	28	21	25	13	0	2	8	6	124	185	34	82	8	26	11	3	12	113	67	90	119	140	20	29	25	3	18	35	30	13	27	2	5	121	4	16	58	28	30	14	60	157	123	85	0
....................................................................................................................................................................ACAGCCATTTTGACGAGTTA..............................................................................	20	2	3201.00	6402	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	27	86	3	0	0	0	13	0	0	0	0	0	0	0	40	11	13	27	7	14	17	24	15	15	7	43	9	33	46	32	11	35	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	4	4	4	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	1	1	0	0	1	1	7	2	0	0	0	1	0	0	0	0	0	0	0	1	2	0	3	126	137	76	61	57	84	105	83	99	6	35	35	44	19	0	0	0	0	0	2	0	7	3	3	0	8	4	0	3	0	0	3	2	0	5	0	3	0	1	0	0	1	3	8	0	0	36	113	9	45	0	0	1	9	6	6	8	0	0	0	0	0	64	175	0	0	1	0	0	0	4	17	2	12	20	17	1	3	6	45	15	11	7	4	38	0	0	0	0	1	0	0	0	8	11	0	1	1	1	2	0	5	0	1	2	0	1	13	0	2	0	0	5	2	2	6	0	3	4	3	10	3	12	9	2	7	1	233	1050	245	694	233	619	171	445	8	2	0	0	0	1	1	1	2	31	11	2	0	0	4	28	90	6	18	0	1	0	0	0	11	26	16	26	0	3	2	3	0	0	1	2	2	0	0	0	1	0	0	1	1	4	0	0	2	1	2	0
...................................................................................................................................................................CACAGCCATTTTGACGAGTT...............................................................................	20	2	2969.00	5938	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	4	7	0	2	0	0	24	0	0	0	0	0	0	0	0	1	1	4	0	1	2	3	1	0	0	3	2	0	0	7	2	6	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	19	22	12	22	0	0	0	0	0	0	2	0	0	0	5	0	0	1	0	1	0	1	0	0	0	0	0	5	7	6	9	0	0	2	0	2	0	3	0	0	1	1	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	7	2	0	0	11	29	12	22	10	10	4	7	9	2	0	0	0	0	0	13	5	28	2	11	33	3	2	0	1	0	0	1	6	1	4	0	0	0	2	0	0	11	3	17	0	10	1	8	0	5	0	0	0	1	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	21	10	14	8	7	6	4	3	1	5	6	1	0	0	1	6	0	0	11	0	0	0	0	4	5	0	0	0	2	0	0	1	1	1	2	0	7	10	4	2	4	2	4	1	7	6	3	5	3	4	21	8	10	20	7	4	1	554	2739	69	322	73	414	65	294	9	43	9	0	10	1	4	2	4	7	17	2	4	12	1	31	93	5	11	0	4	5	2	4	137	7	13	29	10	7	36	11	4	5	6	8	3	6	0	0	2	0	0	0	3	4	3	2	8	14	5	59
..................................................................................................................................................................TCACAGCCATTTTGACGAGTT...............................................................................	21	2	2575.00	5150	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	0	1	0	0	2	5	0	12	0	0	15	0	1	0	0	0	0	0	0	0	2	1	0	1	0	1	1	3	2	4	2	4	6	9	3	7	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	6	2	2	1	17	13	10	18	16	57	41	3	2	21	4	3	2	13	27	15	2	1	15	17	16	3	75	87	170	185	29	32	4	6	9	5	21	10	0	2	0	0	1	0	1	0	6	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	3	0	11	1	2	4	5	6	0	2	0	0	0	0	0	0	0	0	24	7	26	1	16	28	4	5	0	4	1	0	0	7	0	6	1	0	0	3	0	0	4	2	9	0	15	1	8	2	4	0	0	0	4	0	4	0	0	0	0	0	0	5	8	0	0	0	1	0	0	8	1	12	1	13	0	3	16	9	26	12	9	3	6	39	1	0	0	4	0	0	0	0	7	9	0	9	3	15	12	1	22	3	3	12	4	10	14	2	7	5	1	12	8	12	19	6	23	12	4	30	12	19	52	6	12	14	302	738	92	333	97	256	104	310	15	41	11	0	16	7	8	1	4	3	17	0	0	9	0	53	137	9	18	5	8	1	2	9	107	16	19	42	81	11	59	17	3	13	17	14	19	30	2	1	6	1	1	20	12	9	22	14	56	60	33	23
................................................................................................................................................................TATCACAGCCATTTTGACG...................................................................................	19	2	2548.50	5097	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	6	1	0	1	5	1	3	0	0	1	2	14	5	24	23	4	3	71	1	0	3	0	4	0	6	7	1	2	3	2	3	1	7	4	6	1	0	0	0	3	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	38	39	27	32	5	2	0	0	0	2	5	4	4	0	5	9	0	1	16	5	14	2	2	1	0	28	0	14	2	31	29	10	13	3	1	4	3	2	8	0	9	5	0	0	0	0	1	5	1	4	6	7	6	0	0	231	330	0	0	0	2	12	12	8	5	2	5	1	6	9	6	1	4	9	0	2	1	4	0	0	1	0	0	6	16	3	4	10	25	11	33	0	1	3	2	9	27	6	25	18	14	1	11	12	0	29	21	48	1	38	5	10	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	7	8	8	38	48	15	13	9	20	38	38	26	3	5	46	81	22	5	187	0	0	0	0	2	2	2	6	52	57	12	19	19	27	410	32	18	37	67	16	14	26	19	18	9	13	7	2	23	7	21	71	2	32	28	24	11	4	11	34	8	11	14	37	6	23	4	19	12	1	57	36	20	57	137	2	1	4	1	5	9	13	14	1	1	3	1	1	2	88	72	5	3	7	28	0	4	7	0	4	2	0	0	18	0	6	416	18	8	8	6	9	17	117	270	29	7	6
................................................................................................................................................................TATCACAGCCATTTTGAC....................................................................................	18	2	2347.50	4695	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	6	0	7	0	0	0	19	123	26	2	1	28	42	0	1	0	0	0	0	0	0	0	2	0	3	0	1	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	18	17	19	7	0	2	1	0	0	0	2	3	0	0	4	2	0	0	0	2	2	3	2	0	0	0	1	1	2	6	6	0	0	2	0	2	0	0	0	0	0	0	0	0	0	0	1	3	1	2	192	3	2	0	9	1133	2091	0	0	0	0	18	34	0	1	0	0	0	0	0	2	2	2	3	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	2	5	0	9	47	20	4	1	27	3	126	0	5	1	32	0	0	0	7	0	13	5	9	0	0	0	0	0	3	0	0	0	1	0	0	0	0	4	2	0	0	0	0	0	0	2	4	0	8	15	4	5	4	0	57	38	3	1	0	1	4	22	10	4	0	0	0	0	0	0	0	0	2	2	0	0	1	0	0	1	0	0	3	1	0	0	0	2	0	2	1	0	0	1	1	15	5	6	14	8	4	4	5	12	0	2	1	12	3	15	1	12	1	0	2	1	2	5	0	1	5	2	4	0	1	3	1	1	0	3	0	0	0	5	3	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	4	1	1	129
.....................................................................................................................................................................CAGCCATTTTGACGAGTT...............................................................................	18	2	1983.00	3966	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	12	27	0	1	0	0	2	0	0	0	0	0	0	0	0	4	0	5	1	0	0	1	5	3	0	5	4	2	6	2	1	10	3	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	16	11	10	11	0	0	0	0	1	0	4	0	0	0	1	0	0	0	0	0	1	3	0	0	1	0	0	0	7	6	6	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	9	5	7	0	15	87	30	42	39	16	8	3	3	2	0	0	0	0	0	19	14	14	7	8	5	5	2	0	2	0	0	3	1	0	6	0	0	0	0	0	0	12	3	23	1	3	4	28	2	6	0	0	0	7	0	3	12	0	0	0	0	0	3	10	2	0	0	0	0	0	42	19	35	27	17	12	14	0	0	3	0	0	0	0	1	1	0	0	0	0	0	0	0	5	2	0	2	0	1	2	0	2	0	0	2	0	3	10	3	0	2	0	7	3	1	7	5	6	11	6	42	14	14	25	24	4	9	147	746	74	356	44	351	61	362	11	17	18	2	18	6	2	7	5	13	18	5	5	29	3	29	96	5	22	1	14	3	4	2	109	20	32	57	7	7	34	14	1	6	10	12	11	10	2	0	1	1	2	2	3	5	1	4	7	6	2	89
................................................................................................................................................................TATCACAGCCATTTTGACGAGTAAA.............................................................................	25	2	1499.50	2999	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	7	0	0	0	0	0	0	0	0	0	0	0	4	3	1	14	2	5	0	13	4	0	1	2	1	5	3	3	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	12	12	2	2	13	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	4	1	0	0	0	1	0	3	0	0	6	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	38	44	27	29	14	5	40	6	15	0	2	2	7	4	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	19	17	21	11	0	0	0	4	0	25	0	0	0	0	0	0	9	53	0	0	2	0	0	0	1	0	1	1	3	3	0	7	7	11	5	25	22	8	50	5	0	0	1	0	0	0	0	1	0	0	2	0	0	0	0	2	0	0	1	1	0	1	0	0	0	0	0	1	0	1	1	0	0	2	1	0	2	2	0	1	0	105	274	81	322	120	445	17	73	1	1	2	0	0	1	0	0	0	33	4	0	1	1	13	34	64	20	45	1	0	1	1	0	3	308	48	173	3	0	0	5	0	0	9	0	2	0	0	0	2	2	13	32	7	13	0	5	0	1	5	0
....................................................................................................................................................................ACAGCCATTTTGACGAGTTT..............................................................................	20	2	1244.50	2489	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	5	0	0	0	0	61	0	1	0	0	0	0	0	0	4	2	6	2	1	0	5	9	1	0	4	5	7	15	11	8	13	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	15	13	17	8	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	4	0	1	0	5	8	47	1	0	0	1	2	0	0	0	0	0	0	0	0	0	0	3	23	19	20	11	8	26	29	23	14	31	14	17	29	11	0	0	0	0	0	5	6	10	25	3	5	24	29	0	10	0	0	19	14	0	12	1	7	0	3	1	0	1	2	31	0	6	25	11	16	13	0	0	0	9	1	12	0	0	0	0	0	0	13	14	0	0	0	0	0	0	13	21	10	15	16	7	18	4	6	16	7	3	1	0	7	0	0	0	0	0	0	0	0	2	2	0	3	0	12	1	1	3	3	8	4	1	6	13	3	2	5	0	14	3	12	4	2	9	13	4	31	8	17	22	10	4	6	50	194	88	230	54	140	43	101	8	8	3	0	15	11	13	9	7	3	4	1	0	11	1	1	20	4	10	3	8	0	0	0	27	4	2	9	10	10	22	12	1	6	12	4	5	7	0	1	5	2	3	2	0	2	7	2	10	6	4	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAT.............................................................................	25	2	1231.00	2462	0	0	0	0	1	1	2	1	0	0	0	0	0	0	0	0	0	0	0	0	1	4	1	1	0	0	0	0	0	0	0	0	0	0	1	3	3	2	4	1	4	10	30	1	0	3	2	4	21	8	11	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	1	0	7	2	11	3	8	1	2	2	0	0	1	0	0	1	1	1	0	0	0	0	0	0	7	2	9	1	0	0	0	0	1	0	0	1	0	1	0	0	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	1	38	35	12	7	4	8	21	3	24	1	10	9	3	3	0	0	0	0	0	4	0	0	0	1	0	5	5	0	2	0	0	1	2	0	5	0	3	0	5	0	0	0	0	1	0	3	14	9	5	5	0	0	0	2	1	11	0	0	0	0	0	0	12	20	0	0	0	0	0	0	4	0	1	2	37	4	0	15	12	17	29	15	4	1	39	4	0	0	6	74	30	0	0	4	1	0	0	0	1	1	1	4	1	2	0	2	1	4	0	4	1	0	4	0	5	1	2	2	0	3	6	2	6	2	5	2	1	63	216	70	233	74	239	51	196	4	4	6	0	4	1	1	6	5	26	21	1	1	0	5	46	90	17	27	1	7	0	1	0	6	26	31	52	7	1	3	2	1	1	12	1	3	3	0	3	8	3	5	4	0	2	3	3	3	2	11	0
....................................................................................................................................................................ACAGCCATTTTGACGAGTTAA.............................................................................	21	3	1195.67	3587	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	13	38	1	0	0	0	0	0	0	0	0	0	0	0	11	9	6	19	0	6	5	8	8	8	0	12	1	16	23	5	1	16	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	16	118	121	38	46	38	26	69	22	40	4	8	11	20	7	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	1	0	1	0	0	0	0	0	0	0	0	1	0	0	7	67	1	15	0	0	0	0	2	0	1	0	0	0	0	0	54	226	0	0	0	0	0	0	2	0	0	4	1	2	0	9	4	16	8	7	4	6	24	0	0	0	0	0	0	0	0	4	4	0	1	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	1	0	0	0	0	3	0	0	2	0	0	1	0	126	715	137	443	132	473	41	124	0	0	0	0	0	0	0	0	0	22	2	0	0	0	2	8	28	1	8	0	0	0	0	0	0	10	6	20	0	1	0	1	0	0	0	1	0	0	0	0	0	0	1	2	3	1	0	0	0	0	0	0
..................................................................................................................................................................TCACAGCCATTTTGACGAGT................................................................................	20	2	1176.00	2352	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	7	0	0	7	0	0	0	0	0	0	0	1	1	1	1	0	2	0	2	0	0	0	2	0	0	0	2	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	1	1	2	12	8	25	17	6	14	17	1	0	9	9	0	9	8	5	19	3	1	6	21	70	0	17	32	61	72	16	26	2	4	7	5	12	4	0	3	3	0	3	0	1	1	53	0	2	0	3	2	0	0	0	0	0	0	0	0	0	0	3	0	2	4	0	0	1	0	0	1	1	0	1	0	0	0	0	0	0	0	12	5	11	1	13	10	6	9	0	2	0	0	6	4	0	8	0	0	0	2	0	0	0	0	19	1	9	0	2	1	1	0	0	0	0	0	1	0	0	0	0	0	0	0	5	0	0	0	1	0	0	3	4	2	0	10	0	1	0	1	5	2	1	1	0	7	0	0	0	0	0	0	0	0	5	4	0	5	5	8	9	2	8	2	3	13	5	7	13	3	13	8	9	9	5	9	8	0	14	6	3	20	4	11	20	3	1	1	77	211	24	106	26	97	26	62	7	18	5	0	8	6	4	1	10	2	7	1	1	0	0	18	38	0	6	3	3	0	1	3	53	16	4	8	119	10	26	6	0	7	9	10	8	22	0	0	19	1	1	6	5	4	20	25	70	46	40	2
.......................................................................................................................TCGTTAAAATGTTTGTGAACTTATG......................................................................................................................	25	1	1152.00	1152	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	3	2	23	27	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	38	21	41	15	2	0	0	0	0	1	1	0	0	1	0	0	0	0	1	3	7	0	0	0	0	0	0	0	0	0	5	4	0	2	0	2	2	0	0	0	3	1	4	0	6	1	6	2	0	0	0	0	0	0	0	0	0	0	1	2	27	32	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	12	16	0	8	8	2	3	30	2	26	3	24	7	37	17	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	32	18	1	0	3	0	0	0	0	2	3	0	1	0	0	0	0	0	3	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	2	24	45	49	48	324	74	3	3	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	15	0	1	1	2	0	0	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTA.............................................................................	25	2	1019.50	2039	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	5	1	1	6	1	1	0	5	8	3	1	2	2	6	20	2	8	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	1	2	0	4	22	0	4	5	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	2	7	0	2	2	0	0	1	0	0	3	0	1	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	28	24	18	16	5	9	13	8	14	2	3	10	5	4	0	0	0	0	0	0	0	0	0	0	0	0	5	0	4	0	0	0	4	0	0	0	4	0	4	0	0	2	7	1	0	0	4	6	5	8	0	0	0	0	0	5	0	0	0	0	0	0	8	20	0	0	0	0	0	0	5	0	0	0	10	1	0	8	4	11	19	15	3	6	28	4	0	0	3	0	0	0	0	1	0	0	7	0	0	1	0	1	0	0	0	0	1	3	3	3	1	0	3	1	4	2	1	3	0	2	3	1	3	9	1	3	0	53	212	37	189	59	318	43	119	0	1	7	2	3	5	1	1	2	30	2	0	1	0	3	30	63	12	20	3	9	3	1	1	5	30	20	65	8	2	8	5	0	3	4	4	4	2	0	1	5	3	4	6	0	4	17	0	14	8	24	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA..............................................................................	23	2	1015.50	2031	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2	1	1	4	0	4	0	1	0	5	2	3	4	3	4	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	1	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	7	0	10	3	6	4	2	4	1	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	1	0	1	1	4	1	3	0	0	1	1	0	2	3	0	0	0	0	0	1	11	0	0	0	0	0	0	2	0	1	0	3	0	0	1	1	0	4	1	1	0	2	1	0	0	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	1	0	1	2	1	0	0	2	0	72	589	40	326	34	351	14	175	9	0	2	0	0	0	0	1	1	14	6	0	0	2	0	24	58	4	28	0	1	0	0	1	11	7	29	34	2	0	2	3	0	2	1	1	0	4	0	0	1	0	1	4	1	1	1	1	3	2	4	0
...................................................................................................................................................................CACAGCCATTTTGACGAGT................................................................................	19	2	907.00	1814	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	11	0	0	0	0	0	0	0	0	0	1	0	1	0	1	1	1	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	6	1	6	0	0	2	0	0	0	3	0	1	0	0	1	0	0	0	0	0	1	1	0	1	5	0	0	1	3	0	0	0	1	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	3	5	2	8	0	3	7	4	1	1	9	0	0	0	1	0	0	0	0	0	9	17	1	3	0	7	2	9	0	3	0	0	2	5	1	5	0	1	0	2	0	0	6	9	24	0	5	0	2	1	2	0	0	0	1	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	10	5	13	5	4	2	0	0	0	0	2	0	0	1	0	0	0	0	0	0	0	0	0	3	4	0	2	0	0	0	1	0	1	0	0	2	4	11	1	1	5	2	3	1	0	0	1	4	2	0	7	0	4	3	1	0	2	169	744	13	78	11	77	20	61	2	21	2	1	4	2	2	2	11	3	8	2	4	3	0	7	14	0	3	1	2	3	5	6	55	11	2	14	17	1	13	2	2	3	2	2	4	2	0	2	14	1	3	1	5	7	5	4	12	11	3	5
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTAA............................................................................	26	2	898.00	1796	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0	5	3	1	0	2	0	4	6	2	2	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	7	3	4	0	13	3	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	1	1	0	5	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	21	29	54	28	5	5	7	5	7	0	3	1	9	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	7	1	12	0	0	0	0	0	1	0	0	0	0	0	0	8	10	0	0	0	0	0	0	0	5	0	3	6	1	0	5	2	15	7	7	6	2	33	1	0	0	0	0	0	0	0	1	1	0	7	0	0	0	0	2	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	28	197	64	240	63	380	20	94	1	0	1	0	1	3	0	1	0	23	1	0	1	0	6	24	39	15	29	0	0	0	0	0	2	32	22	69	0	0	0	1	0	1	1	1	2	1	0	1	2	0	1	2	3	3	0	1	1	2	7	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTT.............................................................................	25	2	814.50	1629	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	2	1	0	0	0	2	0	0	0	0	0	0	0	1	0	0	1	0	1	0	1	8	0	0	0	2	2	6	5	4	5	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	4	8	6	0	0	0	3	0	0	6	3	0	0	1	0	0	0	0	1	2	0	0	0	0	4	0	3	9	22	5	5	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	1	0	4	0	3	1	0	0	0	0	0	0	0	0	0	0	0	7	4	3	3	3	16	8	8	2	2	1	4	2	6	0	0	0	0	0	21	0	0	1	1	0	5	3	0	3	0	0	2	1	0	3	0	9	1	10	0	0	1	6	9	0	5	8	7	10	2	0	0	0	1	0	1	0	0	0	0	0	0	1	3	0	0	0	0	0	0	23	13	3	1	21	0	1	6	10	15	19	8	4	4	16	10	0	0	17	0	0	0	0	0	0	0	0	2	8	8	0	5	0	4	2	0	0	11	1	2	1	1	11	3	12	2	1	4	3	10	22	3	16	9	4	2	2	20	53	25	105	26	95	21	88	8	8	11	3	12	4	4	5	4	5	1	2	0	10	3	21	31	10	17	1	11	2	1	3	29	8	12	29	16	8	22	7	2	8	11	5	8	5	0	9	15	7	3	5	8	3	34	16	52	25	25	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCA.............................................................................	25	2	809.50	1619	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	4	0	1	1	13	18	4	1	2	4	3	70	9	4	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	1	4	3	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	1	1	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	1	13	16	7	13	4	3	4	2	6	2	4	5	2	4	0	0	0	0	0	0	0	0	0	3	0	2	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	4	0	0	0	1	7	1	6	0	0	0	0	0	0	0	0	0	0	0	0	3	8	0	0	0	0	0	0	2	0	0	1	5	0	1	0	4	1	3	4	0	0	9	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	1	0	0	0	0	1	3	0	4	0	0	2	1	1	2	1	1	0	1	0	0	1	3	0	3	1	43	318	33	166	45	193	6	75	2	0	5	0	0	0	0	3	0	63	16	1	0	1	2	72	32	35	16	0	4	0	0	0	3	8	13	39	10	3	3	4	1	1	4	1	2	0	0	1	4	2	3	11	3	4	2	3	2	9	11	0
....................................................................................................................................................................ACAGCCATTTTGACGAGTTAAA............................................................................	22	3	625.00	1875	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	6	2	0	0	0	0	0	0	0	0	0	0	0	1	1	1	16	0	2	1	9	4	1	0	7	0	7	7	1	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	35	41	3	14	7	13	29	3	16	1	0	4	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	21	0	8	0	0	0	0	0	1	6	0	0	0	0	0	18	107	0	0	0	0	0	0	0	0	0	1	1	0	0	3	4	21	4	10	6	4	29	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	103	314	123	329	86	307	20	40	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	5	18	1	4	0	0	0	0	0	0	3	5	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	0	0	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTCA..............................................................................	24	2	514.00	1028	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	1	0	1	0	0	2	2	0	0	0	1	3	4	2	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	2	3	2	0	1	0	2	0	0	2	1	2	0	0	0	0	0	0	1	0	0	0	6	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	1	1	2	0	0	0	0	0	4	1	0	0	0	0	0	6	6	0	0	0	0	0	0	0	0	0	2	2	0	0	1	0	0	4	2	1	0	5	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	1	0	1	1	0	2	0	0	0	0	1	1	0	1	1	30	252	20	123	33	206	9	82	0	2	1	0	1	0	0	1	1	14	6	0	0	2	1	55	18	10	9	0	0	0	0	0	3	10	5	9	1	0	0	1	1	1	1	0	1	0	0	0	1	0	0	1	0	0	0	0	7	1	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGGC...............................................................................	23	2	418.50	837	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	1	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	1	1	0	0	0	1	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	3	0	1	1	0	1	0	2	1	0	2	0	0	0	0	2	1	0	1	0	11	151	11	126	19	213	13	93	8	4	10	2	12	3	3	2	1	1	9	1	0	1	1	29	30	11	11	1	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAA.............................................................................	24	2	415.00	830	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	1	2	1	0	1	2	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	4	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	5	0	0	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	4	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	33	267	28	137	20	165	4	23	0	0	0	0	0	0	0	0	0	9	1	0	0	0	2	6	17	2	12	0	0	0	0	0	1	0	12	21	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	2	1	0	0	0	0	1	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAC.............................................................................	25	3	398.67	1196	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	1	1	2	0	27	23	0	1	3	3	0	34	9	10	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	1	2	0	1	0	1	5	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	1	14	3	2	5	3	0	8	1	5	0	2	4	3	1	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	0	0	0	1	4	0	2	0	1	0	1	0	0	1	0	0	0	0	0	13	2	0	0	0	0	0	0	0	0	0	0	4	2	0	1	5	10	8	7	3	2	13	2	0	0	3	123	40	0	0	0	2	0	0	0	0	0	0	0	0	0	0	1	0	2	0	1	0	0	1	0	1	1	1	0	2	1	3	1	3	1	0	1	0	33	144	22	83	34	77	14	43	3	1	0	0	1	0	0	0	0	41	3	0	0	0	1	75	19	35	8	0	3	0	0	0	1	7	11	20	3	1	0	1	1	0	0	0	2	1	0	0	1	0	3	3	5	0	0	0	0	1	4	0
................................................................................................................................................................TATCACAGCCATTTTGACGATC................................................................................	22	2	373.50	747	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	1	0	1	0	1	5	0	0	0	0	2	0	1	0	2	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2	23	15	0	2	0	4	20	66	2	10	0	24	9	0	0	0	1	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	2	11	22	0	3	0	0	19	9	0	10	0	12	0	17	7	0	0	0	2	0	269	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	3	1	2	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	9	6	0	0	0	0	0	2	1	1	0	2	1	1	4	0	0	0	1	0	2	1	0	7	0	3	1	1	1	0	3	4	0	2	0	2	0	0	1	7	0	4	1	7	0	8	0	2	2	0	7	1	3	2	9	1	0	0	1	8	0	5	2	8	3	3	1	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0

droSim2

GA------------------------AA-------------------------------------------AACATATTTCATAACCGACT----GAACCGCGTCTTTCTTATACCATGTCGTTAAAATGTTTGTGAACTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACATTAA-GCG---------------------------------------------------	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
................................................................................................................................................................TATCACAGCCATTTTGACGAGTT...............................................................................	23	2	545309.00	1090618	1716	567	1161	40302	5186	8808	317981	380279	156587	118408	41217	14147	2043	2129	8	41	38
................................................................................................................................................................TATCACAGCCATTTTGACGAGT................................................................................	22	2	75694.00	151388	4801	510	1986	11944	1632	5954	20404	20662	10799	8872	21748	41658	157	251	1	4	5
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA..............................................................................	24	2	64630.50	129261	10	5	125	2294	0	0	16646	19867	46358	38668	3806	1162	221	99	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA.............................................................................	25	2	45092.50	90185	3	0	142	1927	0	0	6315	7376	36356	34779	2655	507	110	15	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAAA............................................................................	26	2	30397.50	60795	0	0	44	769	0	0	7380	8103	26296	17207	881	81	30	4	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAG.................................................................................	21	2	13273.50	26547	3571	396	521	1344	3154	12136	496	418	173	148	1005	3015	34	130	1	1	4
................................................................................................................................................................TATCACAGCCATTTTGACGA..................................................................................	20	2	6109.00	12218	235	17	14	83	1976	7296	837	900	290	246	209	96	3	9	1	0	6
....................................................................................................................................................................ACAGCCATTTTGACGAGTT...............................................................................	19	2	5143.50	10287	8	8	19	6	20	10	27	38	147	314	9580	100	4	6	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGAC....................................................................................	18	2	3814.00	7628	77	9	9	6	1728	5622	26	29	3	8	106	0	0	4	0	0	1
................................................................................................................................................................TATCACAGCCATTTTGACG...................................................................................	19	2	3487.00	6974	1752	92	41	33	996	3894	4	3	1	0	147	8	0	3	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT..............................................................................	24	2	3450.00	6900	32	14	4	914	772	914	1089	1071	670	451	601	217	18	132	0	1	0
.......................................................................................................................................................................GCCATTTTGACGAGTT...............................................................................	16	2	2732.00	5464	0	0	0	0	0	0	153	167	184	87	4873	0	0	0	0	0	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTT...............................................................................	22	2	2502.00	5004	2	0	2	2906	52	52	526	612	372	273	170	26	6	5	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTA...............................................................................	23	2	1873.00	3746	5	2	3	86	0	0	930	1126	880	556	79	33	2	44	0	0	0
....................................................................................................................................................................ACAGCCATTTTGACGAGT................................................................................	18	2	1588.50	3177	32	2	3	0	6	2	2	3	3	3	2729	392	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGA................................................................................	22	2	1024.00	2048	48	10	0	40	0	0	706	623	345	203	34	35	2	2	0	0	0
....................................................................................................................................................................ACAGCCATTTTGACGAGTTA..............................................................................	20	2	1018.00	2036	0	1	2	0	0	0	5	3	131	269	1611	14	0	0	0	0	0
.......................................................................................................................................................................GCCATTTTGACGAGT................................................................................	15	2	898.00	1796	0	0	0	0	0	0	59	59	75	14	1589	0	0	0	0	0	0
......................................................................................................................................................................AGCCATTTTGACGAGTT...............................................................................	17	2	779.50	1559	0	0	0	0	0	0	135	164	148	34	1078	0	0	0	0	0	0
....................................................................................................................................................................ACAGCCATTTTGACGAGTTAA.............................................................................	21	2	749.00	1498	0	0	2	2	0	0	3	4	111	351	1023	2	0	0	0	0	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGT................................................................................	21	2	467.00	934	6	0	1	753	4	54	13	18	4	9	54	15	0	2	0	0	1
......................................................................................................................................................................AGCCATTTTGACGAGT................................................................................	16	2	447.50	895	0	0	0	0	0	0	56	49	73	18	699	0	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTAA..............................................................................	24	2	437.00	874	1	1	4	14	0	0	83	122	312	240	53	20	2	22	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTAAA.............................................................................	25	2	433.50	867	1	0	0	17	0	0	108	137	369	216	17	2	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGG................................................................................	22	2	391.00	782	340	51	209	5	0	0	8	15	7	3	18	126	0	0	0	0	0
.....................................................................................................................................................................CAGCCATTTTGACGAGTT...............................................................................	18	2	385.50	771	0	0	3	6	4	2	10	20	10	20	691	4	1	0	0	0	0
.......................................................................................................................................................................GCCATTTTGACGAGTTA..............................................................................	17	2	372.50	745	0	0	0	0	0	0	18	21	125	60	521	0	0	0	0	0	0
.......................................................................................................................TCGTTAAAATGTTTGTGAACT..........................................................................................................................	21	1	300.00	300	274	3	18	0	0	5	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA..............................................................................	23	2	286.50	573	0	0	0	174	0	0	38	51	165	131	12	1	1	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTAAA...........................................................................	27	2	280.00	560	0	0	0	5	0	0	96	89	214	144	11	0	1	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGC................................................................................	22	2	255.50	511	263	26	53	19	0	0	9	8	8	7	50	68	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTG...............................................................................	23	2	215.50	431	1	3	3	10	0	0	172	193	5	1	40	2	1	0	0	0	0
....................................................................................................................................................................ACAGCCATTTTGACGAGTTAAA............................................................................	22	2	202.00	404	0	0	0	1	0	0	2	3	33	62	302	1	0	0	0	0	0
.....................................................................................................................................................................CAGCCATTTTGACGAGT................................................................................	17	2	197.50	395	0	0	0	0	0	0	3	7	10	4	371	0	0	0	0	0	0
..................................................................................................................................................................TCACAGCCATTTTGACGAGTT...............................................................................	21	2	178.00	356	0	0	0	147	0	4	27	76	21	8	61	10	2	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTC...............................................................................	23	2	173.50	347	19	9	8	18	0	0	77	62	23	17	88	23	0	3	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG..............................................................................	24	2	154.00	308	52	3	62	61	0	0	3	5	8	7	60	47	0	0	0	0	0
........................................................................................................................................................................CCATTTTGACGAGTT...............................................................................	15	2	152.50	305	0	0	0	0	0	0	74	71	37	14	109	0	0	0	0	0	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAA.............................................................................	24	2	150.50	301	0	0	0	130	0	0	13	13	61	73	10	1	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTAA............................................................................	26	2	148.00	296	0	0	0	8	0	0	29	20	127	102	7	2	1	0	0	0	0
...................................................................................................................................................................CACAGCCATTTTGACGAGTT...............................................................................	20	2	121.00	242	2	0	0	19	6	4	11	16	21	12	145	5	0	1	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTC..............................................................................	24	2	116.00	232	2	0	3	27	0	0	36	25	51	38	31	18	0	1	0	0	0
....................................................................................................................................................................ACAGCCATTTTGACGAGTTT..............................................................................	20	2	114.50	229	0	0	0	0	0	0	0	0	0	0	229	0	0	0	0	0	0
....................................................................................................................................................................ACAGCCATTTTGACGAG.................................................................................	17	2	110.00	220	0	0	0	0	0	0	0	0	0	0	220	0	0	0	0	0	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAG.................................................................................	20	2	99.50	199	3	0	0	90	14	88	1	0	0	0	3	0	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAC.................................................................................	21	2	98.00	196	167	13	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................TCGTTAAAATGTTTGTGAACTT.........................................................................................................................	22	1	97.00	97	80	0	13	0	0	1	0	0	0	2	0	1	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTA.............................................................................	25	2	93.00	186	0	0	0	5	0	0	14	19	61	65	9	6	2	5	0	0	0
......................................................................................................................................................................AGCCATTTTGACGAGTTA..............................................................................	18	2	92.00	184	0	0	0	0	0	0	9	18	62	15	80	0	0	0	0	0	0
.....................................................................................................................................................................CAGCCATTTTGACGAG.................................................................................	16	2	73.50	147	0	0	0	0	0	0	0	0	0	0	147	0	0	0	0	0	0
.......................................................................................................................................................................GCCATTTTGACGAGTTT..............................................................................	17	2	71.00	142	0	0	0	0	0	0	2	1	3	0	136	0	0	0	0	0	0
......................................................................................................................................................................AGCCATTTTGACGAG.................................................................................	15	2	68.50	137	0	0	0	0	0	0	1	1	0	3	132	0	0	0	0	0	0
.......................................................................................................................TCGTTAAAATGTTTGTGAACTTATG......................................................................................................................	25	1	66.00	66	3	0	17	4	0	0	0	0	2	3	0	37	0	0	0	0	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAAA............................................................................	25	2	59.00	118	0	0	0	38	0	0	8	9	39	17	6	0	1	0	0	0	0
..................................................................................................................................................................TCACAGCCATTTTGACGAGT................................................................................	20	2	51.50	103	0	0	2	48	0	4	1	3	1	2	26	16	0	0	0	0	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTT..............................................................................	23	2	50.00	100	0	0	0	68	8	8	3	2	2	5	3	0	0	1	0	0	0
......................................................................................................................................................................AGCCATTTTGACGAGTTAA.............................................................................	19	3	48.67	146	0	0	0	0	0	0	11	7	61	14	53	0	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTG.............................................................................	25	2	39.00	78	3	0	10	8	2	2	3	6	1	0	17	26	0	0	0	0	0
.......................................................................................................................................................................GCCATTTTGACGAGTTAA.............................................................................	18	13	36.54	475	0	0	0	0	0	0	8	9	73	52	333	0	0	0	0	0	0
...................................................................................................................................................................CACAGCCATTTTGACGAGT................................................................................	19	2	35.50	71	0	0	1	2	0	4	0	1	3	0	54	6	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAT.............................................................................	25	2	35.00	70	0	0	0	6	0	0	4	7	21	19	10	3	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAA.................................................................................	21	2	34.00	68	1	2	0	3	0	0	5	3	26	21	3	1	1	2	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCA.............................................................................	25	2	32.00	64	0	0	2	1	0	0	7	5	15	19	3	12	0	0	0	0	0
.....................................................................................................................................................................CAGCCATTTTGACGAGTTA..............................................................................	19	2	30.50	61	0	0	0	0	0	0	1	0	3	7	50	0	0	0	0	0	0
.....................................................................................................................................................................CAGCCATTTTGACGAGTTAA.............................................................................	20	2	29.50	59	0	0	0	0	0	0	2	0	5	6	46	0	0	0	0	0	0
...............................................................................................................................................................ATATCACAGCCATTTTGACGAGTT...............................................................................	24	2	29.50	59	0	0	0	31	2	0	2	1	0	1	8	0	4	10	0	0	0
.................................................................................................................................................................ATCACAGCCATTTTGACGA..................................................................................	19	2	29.00	58	0	0	0	5	16	36	1	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGA.....................................................................................	17	4	26.00	104	0	0	0	0	0	0	12	16	5	9	62	0	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAAC............................................................................	26	2	22.00	44	0	0	0	1	0	0	1	3	22	13	2	2	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCT.............................................................................	25	2	22.00	44	0	0	0	0	0	0	11	8	20	5	0	0	0	0	0	0	0
........................................................................................................................................................................CCATTTTGACGAGTTA..............................................................................	16	3	21.33	64	0	0	0	0	0	0	7	7	24	7	19	0	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGG..................................................................................	20	2	21.00	42	34	3	3	1	0	0	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTATA............................................................................	26	2	20.00	40	0	0	0	0	0	0	2	8	19	10	0	1	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTGA.............................................................................	25	2	19.50	39	0	0	0	1	0	0	2	2	16	6	8	4	0	0	0	0	0
...................................................................................................................................................................CACAGCCATTTTGACGAGTTA..............................................................................	21	2	19.50	39	0	0	0	1	0	0	1	5	6	8	17	1	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTGA............................................................................	26	2	19.50	39	0	0	0	0	0	0	14	14	9	2	0	0	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTCA..............................................................................	24	2	19.00	38	0	0	0	0	0	0	2	4	15	14	2	1	0	0	0	0	0
..................................................................................................................................................................TCACAGCCATTTTGACGAGTTA..............................................................................	22	2	18.50	37	0	0	0	10	0	0	3	9	7	2	6	0	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAC.............................................................................	25	3	18.33	55	0	0	0	5	0	0	0	4	15	23	7	1	0	0	0	0	0
.......................................................................................................................TCGTTAAAATGTTTGTGAACTTATGA---..................................................................................................................	26	1	18.00	18	1	0	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................ATCACAGCCATTTTGACG...................................................................................	18	2	16.00	32	0	0	0	0	10	22	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTACA............................................................................	26	3	15.67	47	0	0	0	2	0	0	7	4	17	17	0	0	0	0	0	0	0
.......................................................................................................................TCGTTAAAATGTTTGTGAACC..........................................................................................................................	21	1	15.00	15	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................TCGTTAAAATGTTTGTGAAC...........................................................................................................................	20	1	15.00	15	11	1	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................CATTTTGACGAGTTT..............................................................................	15	2	14.50	29	0	0	0	0	0	0	1	2	3	3	20	0	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTCAA.............................................................................	25	2	14.50	29	0	1	0	2	0	0	3	3	12	7	1	0	0	0	0	0	0
...............................................................................................................................................................ATATCACAGCCATTTTGACGAG.................................................................................	22	2	13.50	27	3	0	3	4	0	0	1	1	1	0	6	8	0	0	0	0	0
....................................................................................................................................................................ACAGCCATTTTGACGA..................................................................................	16	4	13.00	52	0	0	0	0	0	0	2	0	0	0	50	0	0	0	0	0	0
.......................................................................................................................TCGTTAAAATGTTTGTGAACTTATGG---..................................................................................................................	26	1	12.00	12	0	0	11	0	0	0	0	0	0	0	0	1	0	0	0	0	0
....................................................................................................................................................................ACAGCCATTTTGACGAGTAA..............................................................................	20	2	12.00	24	0	0	0	0	0	0	0	0	0	2	22	0	0	0	0	0	0

droSec2

GA------------------------AA-------------------------------------------AACATATTTCATAACCGACT----GAACCGCGTCTTTCTTATACCATGTCGTTAAAATGTTTGTGAACTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACATTAA-GCG---------------------------------------------------	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
................................................................................................................................................................TATCACAGCCATTTTGACGAGT................................................................................	22	2	133059.00	266118	14933	25426	74068	151691
................................................................................................................................................................TATCACAGCCATTTTGACGAGTT...............................................................................	23	2	79718.00	159436	53359	30686	40362	35029
................................................................................................................................................................TATCACAGCCATTTTGACGAG.................................................................................	21	2	7510.00	15020	1879	702	1320	11119
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT..............................................................................	24	2	3517.50	7035	1174	3160	511	2190
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA..............................................................................	24	2	3292.00	6584	1802	421	3866	495
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTT...............................................................................	22	2	2016.00	4032	3873	39	65	55
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA.............................................................................	25	2	1337.00	2674	570	93	1869	142
....................................................................................................................................................................ACAGCCATTTTGACGAGT................................................................................	18	2	682.50	1365	2	15	512	836
.................................................................................................................................................................ATCACAGCCATTTTGACGAGT................................................................................	21	2	563.00	1126	965	19	22	120
................................................................................................................................................................TATCACAGCCATTTTGACGA..................................................................................	20	2	557.00	1114	144	28	56	886
................................................................................................................................................................TATCACAGCCATTTTGACGAGA................................................................................	22	2	345.50	691	68	64	34	525
................................................................................................................................................................TATCACAGCCATTTTGACGAGC................................................................................	22	2	234.00	468	22	50	140	256
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAAA............................................................................	26	2	223.50	447	163	13	217	54
.......................................................................................................................TCGTTAAAATGTTTGTGAACTTATG......................................................................................................................	25	1	207.00	207	6	3	172	26
....................................................................................................................................................................ACAGCCATTTTGACGAGTT...............................................................................	19	2	206.50	413	29	15	207	162
................................................................................................................................................................TATCACAGCCATTTTGACGAGTA...............................................................................	23	2	204.00	408	96	75	91	146
................................................................................................................................................................TATCACAGCCATTTTGACG...................................................................................	19	2	192.00	384	90	1	8	285
..................................................................................................................................................................TCACAGCCATTTTGACGAGTT...............................................................................	21	2	120.00	240	172	4	52	12
..................................................................................................................................................................TCACAGCCATTTTGACGAGT................................................................................	20	2	97.00	194	47	4	90	53
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG..............................................................................	24	2	96.50	193	57	8	54	74
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTC..............................................................................	24	2	71.50	143	53	22	26	42
.................................................................................................................................................................ATCACAGCCATTTTGACGAG.................................................................................	20	2	66.00	132	124	3	0	5
................................................................................................................................................................TATCACAGCCATTTTGACGAGTAA..............................................................................	24	2	61.50	123	6	32	62	23
................................................................................................................................................................TATCACAGCCATTTTGACGAGTC...............................................................................	23	2	59.50	119	21	34	31	33
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTG.............................................................................	25	2	59.00	118	19	25	46	28
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA..............................................................................	23	2	55.50	111	108	0	3	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGG................................................................................	22	2	47.50	95	14	8	23	50
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTT..............................................................................	23	2	47.00	94	90	2	0	2
................................................................................................................................................................TATCACAGCCATTTTGACGAA.................................................................................	21	2	30.50	61	6	8	0	47
...................................................................................................................................................................CACAGCCATTTTGACGAGTT...............................................................................	20	2	29.50	59	41	9	6	3
.......................................................................................................................TCGTTAAAATGTTTGTGAACT..........................................................................................................................	21	1	26.00	26	1	0	4	21
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAT.............................................................................	25	2	25.00	50	1	5	43	1
...................................................................................................................................................................CACAGCCATTTTGACGAGT................................................................................	19	2	23.00	46	14	3	13	16
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAA.............................................................................	24	2	22.50	45	44	0	0	1
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTT.............................................................................	25	2	22.00	44	9	18	5	12
.....................................................................................................................................................................CAGCCATTTTGACGAGTT...............................................................................	18	2	21.00	42	30	2	9	1
................................................................................................................................................................TATCACAGCCATTTTGACGAGTG...............................................................................	23	2	18.50	37	20	4	5	8
...............................................................................................................................................................ATATCACAGCCATTTTGACGAGTT...............................................................................	24	2	18.00	36	35	0	0	1
................................................................................................................................................................TATCACAGCCATTTTGACGAT.................................................................................	21	2	16.50	33	15	3	2	13
....................................................................................................................................................................ACAGCCATTTTGACGAGTTA..............................................................................	20	2	16.00	32	1	0	28	3
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCA.............................................................................	25	2	14.50	29	3	4	20	2
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTA.............................................................................	25	2	12.50	25	7	6	6	6
...............................................................................................................................................................ATATCACAGCCATTTTGACGAGT................................................................................	23	2	11.00	22	9	0	4	9
.......................................................................................................................TCGTTAAAATGTTTGTGAACTT.........................................................................................................................	22	1	11.00	11	3	0	1	7
................................................................................................................................................................TATCACAGCCATTTTGAC....................................................................................	18	2	11.00	22	19	0	1	2
.................................................................................................................................................................ATCACAGCCATTTTGACGAGG................................................................................	21	2	10.50	21	21	0	0	0
...............................................................................................................................................................ATATCACAGCCATTTTGACGAG.................................................................................	22	2	10.00	20	4	2	5	9
................................................................................................................................................................TATCACAGCCATTTTGACGAGTAAA.............................................................................	25	2	10.00	20	5	1	10	4
................................................................................................................................................................TATCACAGCCATTTTGACGT..................................................................................	20	2	9.50	19	1	5	1	12
.................................................................................................................................................................ATCACAGCCATTTTGACGA..................................................................................	19	2	8.50	17	17	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAC.................................................................................	21	2	8.00	16	3	1	2	10
................................................................................................................................................................TATCACAGCCATTTTGACGAAA................................................................................	22	2	7.00	14	0	2	1	11
..................................................................................................................................................................TCACAGCCATTTTGACGAG.................................................................................	19	2	5.50	11	9	0	1	1
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTAA............................................................................	26	2	5.00	10	1	3	2	4
....................................................................................................................................................................ACAGCCATTTTGACGAGTTAA.............................................................................	21	2	5.00	10	0	0	10	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAAA............................................................................	25	2	4.50	9	9	0	0	0
....................................................................................................................................................................ACAGCCATTTTGACGAGTTT..............................................................................	20	2	4.50	9	1	1	2	5
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAC.............................................................................	25	3	4.33	13	3	0	10	0
........................................................................................................................CGTTAAAATGTTTGTGAACTTATG......................................................................................................................	24	1	4.00	4	0	0	3	1

droYak3

TC-------------------------A-------------------------------------------AACATATTTCATAATCGATT----GACCCACGTCTTTCTTATACCATGTCGTTAAAATGTTTGTGAACTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACA-----------------------------------------------------------	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
................................................................................................................................................................TATCACAGCCATTTTGACGAGTT...............................................................................	23	2	84944.50	169889	308	78115	50854	12905	6315	11427	9809	8	7	45	96
................................................................................................................................................................TATCACAGCCATTTTGACGAGT................................................................................	22	2	69072.50	138145	1110	21593	36399	33472	14521	24332	6622	1	2	14	79
................................................................................................................................................................TATCACAGCCATTTTGACGAG.................................................................................	21	2	4102.00	8204	680	2618	1715	1960	387	649	190	0	0	5	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTT...............................................................................	22	2	3758.50	7517	0	6793	635	33	8	28	11	0	0	0	9
................................................................................................................................................................TATCACAGCCATTTTGACGAGC................................................................................	22	2	3341.00	6682	67	45	6317	57	26	152	18	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA..............................................................................	24	2	2523.50	5047	2	1760	2214	858	43	93	77	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTC...............................................................................	23	2	2006.00	4012	6	19	3906	18	11	42	10	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT..............................................................................	24	2	1937.50	3875	7	1794	479	224	274	482	615	0	0	0	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGT................................................................................	21	2	1086.00	2172	0	1797	330	16	9	14	4	0	0	0	2
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA.............................................................................	25	2	860.00	1720	0	646	669	369	4	8	24	0	0	0	0
....................................................................................................................................................................ACAGCCATTTTGACGAGT................................................................................	18	2	425.00	850	1	15	40	339	168	281	6	0	0	0	0
.......................................................................................................................TCGTTAAAATGTTTGTGAACTTATG......................................................................................................................	25	1	378.00	378	1	3	309	59	1	4	1	0	0	0	0
..................................................................................................................................................................TCACAGCCATTTTGACGAGTT...............................................................................	21	2	257.50	515	0	380	119	4	4	1	7	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGA..................................................................................	20	2	241.00	482	28	225	56	50	30	73	20	0	0	0	0
....................................................................................................................................................................ACAGCCATTTTGACGAGTT...............................................................................	19	2	222.00	444	0	64	66	125	52	117	20	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAAA............................................................................	26	2	209.50	419	0	211	160	35	0	0	6	0	0	0	7
................................................................................................................................................................TATCACAGCCATTTTGACG...................................................................................	19	2	190.50	381	205	131	8	5	13	13	0	0	0	0	6
................................................................................................................................................................TATCACAGCCATTTTGACGAGG................................................................................	22	2	186.00	372	105	65	18	68	26	86	4	0	0	0	0
.......................................................................................................................TCGTTAAAATGTTTGTGAACT..........................................................................................................................	21	1	132.00	132	51	3	74	0	1	3	0	0	0	0	0
...................................................................................................................................................................CACAGCCATTTTGACGAGTT...............................................................................	20	2	131.50	263	0	127	123	1	2	2	8	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGA................................................................................	22	2	130.50	261	6	68	68	29	26	53	11	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTA...............................................................................	23	2	123.00	246	2	62	69	39	32	23	18	0	0	0	1
.................................................................................................................................................................ATCACAGCCATTTTGACGAG.................................................................................	20	2	123.00	246	0	233	12	1	0	0	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG..............................................................................	24	2	110.50	221	14	115	42	23	7	15	5	0	0	0	0
.......................................................................................................................TCGTTAAAATGTTTGTGAACTT.........................................................................................................................	22	1	110.00	110	30	2	70	1	1	5	1	0	0	0	0
..................................................................................................................................................................TCACAGCCATTTTGACGAGT................................................................................	20	2	102.50	205	0	99	76	10	2	11	7	0	0	0	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTT..............................................................................	23	2	90.00	180	0	177	2	0	0	0	0	0	0	1	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA..............................................................................	23	2	89.50	179	0	148	31	0	0	0	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTC..............................................................................	24	2	83.00	166	0	53	78	12	3	13	7	0	0	0	0
...............................................................................................................................................................ATATCACAGCCATTTTGACGAGTT...............................................................................	24	2	75.00	150	0	135	5	0	0	0	0	0	0	0	10
.....................................................................................................................................................................CAGCCATTTTGACGAGTT...............................................................................	18	2	71.50	143	0	78	59	3	2	1	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGATC................................................................................	22	2	66.00	132	0	0	114	1	0	17	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAC.................................................................................	21	2	63.50	127	40	0	82	0	1	3	1	0	0	0	0
...................................................................................................................................................................CACAGCCATTTTGACGAGT................................................................................	19	2	45.50	91	0	23	58	2	3	1	4	0	0	0	0
.......................................................................................................................TCGTTAAAATGTTTGTGAACTTAT.......................................................................................................................	24	1	45.00	45	0	1	39	2	1	2	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTG...............................................................................	23	2	42.00	84	1	11	45	4	13	10	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTAA..............................................................................	24	2	32.00	64	0	17	31	11	1	1	3	0	0	0	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGC................................................................................	21	2	31.00	62	1	3	56	0	0	2	0	0	0	0	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAA.............................................................................	24	2	28.00	56	0	46	10	0	0	0	0	0	0	0	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTC...............................................................................	22	2	27.50	55	0	6	48	1	0	0	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTT.............................................................................	25	2	24.00	48	0	29	4	0	5	6	4	0	0	0	0
...............................................................................................................................................................ATATCACAGCCATTTTGACGAGT................................................................................	23	2	23.50	47	0	33	4	4	4	2	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGAC....................................................................................	18	2	21.50	43	11	23	8	0	0	1	0	0	0	0	0
...............................................................................................................................................................ATATCACAGCCATTTTGACGAG.................................................................................	22	2	17.00	34	0	9	10	14	0	1	0	0	0	0	0
.......................................................................................................................TCGTTAAAATGTTTGTGAACTTA........................................................................................................................	23	1	17.00	17	2	0	15	0	0	0	0	0	0	0	0
.......................................................................................................................TCGTTAAAATGTTTGTGAACC..........................................................................................................................	21	1	16.00	16	3	0	13	0	0	0	0	0	0	0	0
.....................................................................................................................TGTCGTTAAAATGTTTGTGAAC...........................................................................................................................	22	1	16.00	16	1	0	14	0	0	1	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAT.............................................................................	25	2	14.00	28	0	18	3	5	1	0	1	0	0	0	0
.......................................................................................................................TCGTTAAAATGTTTGTGAAC...........................................................................................................................	20	1	12.00	12	0	0	10	1	0	0	0	0	0	1	0
.......................................................................................................................TCGTTAAAATGTTTGTGAACTTATGA---..................................................................................................................	26	1	12.00	12	0	0	11	1	0	0	0	0	0	0	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAAA............................................................................	25	2	11.00	22	0	20	2	0	0	0	0	0	0	0	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTG...............................................................................	22	2	11.00	22	0	22	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................TCACAGCCATTTTGACGAGTTA..............................................................................	22	2	10.50	21	0	9	10	2	0	0	0	0	0	0	0
.................................................................................................................................................................ATCACAGCCATTTTGACGA..................................................................................	19	2	10.00	20	0	19	1	0	0	0	0	0	0	0	0
.....................................................................................................................TGTCGTTAAAATGTTTGTGAACT..........................................................................................................................	23	1	8.00	8	4	0	3	1	0	0	0	0	0	0	0
..................................................................................................................................................................TCACAGCCATTTTGACGAGC................................................................................	20	2	8.00	16	0	0	16	0	0	0	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTA.............................................................................	25	2	8.00	16	0	7	3	4	1	0	1	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAA.................................................................................	21	2	8.00	16	1	7	1	3	2	2	0	0	0	0	0
....................................................................................................................................................................ACAGCCATTTTGACGAGTTT..............................................................................	20	2	8.00	16	0	7	1	2	1	4	1	0	0	0	0
.................................................................................................................................................................ATCACAGCCATTTTGACG...................................................................................	18	2	7.50	15	0	15	0	0	0	0	0	0	0	0	0

droEre2

GG----GTTAAG--------------AA-------------------------------------------AACATATTTCAAAAGCGATT----GAACAACGTCTTTCTTATACCATGTCGTTAAAATGTTTGTGAACTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACAATGA-GCGC-------------CACTTAT------G-A-------GTT-ACTTGCAG--	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
................................................................................................................................................................TATCACAGCCATTTTGACGAGT................................................................................	22	2	207052.00	414104	44043	43952	7754	18887	23598	275583	287
................................................................................................................................................................TATCACAGCCATTTTGACGAGTT...............................................................................	23	2	132507.00	265014	99668	53976	2753	5300	30904	40566	31847
................................................................................................................................................................TATCACAGCCATTTTGACGAG.................................................................................	21	2	13425.00	26850	4433	1821	302	1125	464	18692	13
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT..............................................................................	24	2	4408.00	8816	2790	349	105	71	2710	2551	240
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTT...............................................................................	22	2	4128.50	8257	7230	437	8	6	53	65	458
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA..............................................................................	24	2	3105.50	6211	3292	1797	22	264	356	276	204
................................................................................................................................................................TATCACAGCCATTTTGACGAGC................................................................................	22	2	2528.00	5056	42	4327	25	60	31	570	1
.................................................................................................................................................................ATCACAGCCATTTTGACGAGT................................................................................	21	2	1751.00	3502	2947	281	6	8	25	235	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTC...............................................................................	23	2	1410.00	2820	55	2206	7	18	24	495	15
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA.............................................................................	25	2	985.50	1971	1490	271	3	81	41	29	56
................................................................................................................................................................TATCACAGCCATTTTGACGA..................................................................................	20	2	924.50	1849	286	59	17	61	34	1373	19
................................................................................................................................................................TATCACAGCCATTTTGACGAGTA...............................................................................	23	2	473.00	946	237	103	13	11	73	506	3
....................................................................................................................................................................ACAGCCATTTTGACGAGT................................................................................	18	2	397.50	795	9	11	86	190	15	484	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGA................................................................................	22	2	369.50	739	116	73	15	26	23	486	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAAA............................................................................	26	2	275.00	550	508	26	0	10	1	1	4
..................................................................................................................................................................TCACAGCCATTTTGACGAGTT...............................................................................	21	2	256.00	512	331	85	0	6	8	29	53
................................................................................................................................................................TATCACAGCCATTTTGACGAGG................................................................................	22	2	194.50	389	26	10	4	91	10	247	1
................................................................................................................................................................TATCACAGCCATTTTGACG...................................................................................	19	2	194.00	388	114	17	4	2	2	239	10
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG..............................................................................	24	2	182.00	364	177	20	7	12	15	126	7
................................................................................................................................................................TATCACAGCCATTTTGACGAGTG...............................................................................	23	2	169.50	339	37	51	3	6	3	239	0
.......................................................................................................................TCGTTAAAATGTTTGTGAACTTATG......................................................................................................................	25	1	168.00	168	11	15	1	14	5	122	0
..................................................................................................................................................................TCACAGCCATTTTGACGAGT................................................................................	20	2	164.00	328	117	45	1	17	4	144	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAG.................................................................................	20	2	146.50	293	273	10	0	0	0	10	0
....................................................................................................................................................................ACAGCCATTTTGACGAGTT...............................................................................	19	2	136.50	273	31	17	36	41	37	72	39
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTC..............................................................................	24	2	125.00	250	110	55	3	3	23	32	24
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA..............................................................................	23	2	124.50	249	228	20	0	1	0	0	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTT..............................................................................	23	2	119.50	239	232	4	1	0	2	0	0
...............................................................................................................................................................ATATCACAGCCATTTTGACGAGTT...............................................................................	24	2	96.00	192	79	2	0	0	0	2	109
...................................................................................................................................................................CACAGCCATTTTGACGAGTT...............................................................................	20	2	91.50	183	60	31	2	2	9	11	68
...................................................................................................................................................................CACAGCCATTTTGACGAGT................................................................................	19	2	81.50	163	34	38	0	8	7	76	0
.......................................................................................................................................................................GCCATTTTGACGAGTT...............................................................................	16	2	80.00	160	0	0	0	0	0	0	160
................................................................................................................................................................TATCACAGCCATTTTGACGAT.................................................................................	21	2	76.00	152	48	6	3	15	1	79	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTAA..............................................................................	24	2	62.50	125	47	27	0	4	14	33	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAA.............................................................................	24	2	55.00	110	109	1	0	0	0	0	0
.....................................................................................................................................................................CAGCCATTTTGACGAGTT...............................................................................	18	2	52.00	104	27	7	0	0	2	6	62
...............................................................................................................................................................ATATCACAGCCATTTTGACGAGT................................................................................	23	2	43.50	87	36	8	0	4	1	38	0
.......................................................................................................................TCGTTAAAATGTTTGTGAACT..........................................................................................................................	21	1	42.00	42	3	5	1	0	0	33	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTT.............................................................................	25	2	39.50	79	29	3	2	1	28	16	0
...............................................................................................................................................................ATATCACAGCCATTTTGACGAG.................................................................................	22	2	34.00	68	6	13	0	9	1	39	0
.......................................................................................................................TCGTTAAAATGTTTGTGAACTT.........................................................................................................................	22	1	34.00	34	5	3	0	0	0	26	0
................................................................................................................................................................TATCACAGCCATTTTGACGAC.................................................................................	21	2	33.50	67	4	50	0	1	0	12	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGG................................................................................	21	2	32.50	65	65	0	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAT.............................................................................	25	2	26.50	53	26	0	0	0	6	4	17
........................................................................................................................................................................CCATTTTGACGAGTT...............................................................................	15	2	26.00	52	0	0	0	0	0	0	52
................................................................................................................................................................TATCACAGCCATTTTGACGAA.................................................................................	21	2	24.00	48	10	3	0	2	0	33	0
.................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAAA............................................................................	25	2	20.50	41	38	0	0	0	0	0	3
.................................................................................................................................................................ATCACAGCCATTTTGACGAGC................................................................................	21	2	17.00	34	2	32	0	0	0	0	0
......................................................................................................................................................................AGCCATTTTGACGAGTT...............................................................................	17	2	15.50	31	0	0	0	0	0	0	31
................................................................................................................................................................TATCACAGCCATTTTGAC....................................................................................	18	2	15.50	31	13	8	0	1	0	7	2
..................................................................................................................................................................TCACAGCCATTTTGACGAG.................................................................................	19	2	14.50	29	18	3	0	1	0	7	0
................................................................................................................................................................TATCACAGCCATTTTGACGATC................................................................................	22	2	13.50	27	0	25	0	2	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGT..................................................................................	20	2	11.50	23	3	1	1	0	14	4	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTAAA.............................................................................	25	3	11.33	34	29	2	0	1	1	1	0
..................................................................................................................................................................TCACAGCCATTTTGACGAGTTT..............................................................................	22	2	10.00	20	14	1	0	0	0	5	0
..................................................................................................................................................................TCACAGCCATTTTGACGAGTTA..............................................................................	22	2	10.00	20	13	7	0	0	0	0	0
................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTA.............................................................................	25	2	10.00	20	7	3	0	2	2	4	2

dpe-mir-13b-1

scaffold_0:10659936-10660004 -

Known

Unknown

antisense_to_intron

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-25.4	-25.0	-24.9