dpe-mir-13a

Antisense to intron [Dper\GL24478-in]; pre_miRNA [Dper\mir-13a-RM]; utr3 [utr3_minus_7789]; miRNA [Dper\miR-13a-RA]

GTGTTCGGCTCGTACTATTTGGACAAAAAAAAAACCGTCATCCCCATACTTACGTAACCCATCAAACGGTTGTGAAATGTTGCATTTATCAAATCATATCACAGCCATTTTGATGAGTTTCGTGTGGAATGGCCAGCAATCCATCATCGATCGGGGCAGGGCAGGATGGAGCAC ****************************************.((((.((((((.(((.(((((((.((((((((.(((...............))).))))))))..))))))).))).)))).)).))))..**************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V050 head	V057 head	V042 embryo	M042 female body	V111 male body	M021 embryo
................................................................................................TATCACAGCCATTTTGATGAGTT.......................................................	23	0	1	14724.00	14724	6576	5406	2279	346	100	17
................................................................................................TATCACAGCCATTTTGATGAGT........................................................	22	0	1	4959.00	4959	2380	1863	363	316	32	5
................................................................................................TATCACAGCCATTTTGATGAG.........................................................	21	0	1	477.00	477	257	162	9	45	3	1
................................................................................................TATCACAGCCATTTTGATGAGTTT......................................................	24	0	1	361.00	361	153	189	5	6	8	0
....................................................................................................ACAGCCATTTTGATGAGTT.......................................................	19	0	1	147.00	147	70	61	16	0	0	0
................................................................................................TATCACGGCCATTTTGATGAGTT.......................................................	23	1	1	98.00	98	44	47	5	1	1	0
................................................................................................TATCACAGCCATTTTGCTGAGTT.......................................................	23	1	1	96.00	96	33	52	11	0	0	0
.........................................................CCCATCAAACGGTTGTGAAATG...............................................................................................	22	0	1	93.00	93	8	20	48	4	0	13
................................................................................................TATCACAGCCATTTTGATGAGCT.......................................................	23	1	1	91.00	91	41	43	7	0	0	0
................................................................................................TAGCACAGCCATTTTGATGAGTT.......................................................	23	1	1	86.00	86	10	76	0	0	0	0
................................................................................................TATCACAGCCGTTTTGATGAGTT.......................................................	23	1	1	64.00	64	33	26	1	2	2	0
................................................................................................TATCACAGCCATTTTGATGCGTT.......................................................	23	1	1	61.00	61	22	30	9	0	0	0
....................................................................................................ACAGCCATTTTGATGAGT........................................................	18	0	1	58.00	58	31	24	3	0	0	0
................................................................................................TATCACAGCCATTTTGATGTGTT.......................................................	23	1	1	50.00	50	9	31	10	0	0	0
................................................................................................TATCACAGCCATTTTGTTGAGTT.......................................................	23	1	1	45.00	45	11	32	2	0	0	0
.................................................................................................ATCACAGCCATTTTGATGAGTT.......................................................	22	0	1	42.00	42	3	4	1	31	0	3
................................................................................................TATCACAGCCATTTTGATGAGTTA......................................................	24	1	1	40.00	40	12	22	5	1	0	0
................................................................................................TATCACAGCCATTTTGGTGAGTT.......................................................	23	1	1	35.00	35	7	23	5	0	0	0
................................................................................................TATCACAGCCCTTTTGATGAGTT.......................................................	23	1	1	35.00	35	9	11	15	0	0	0
................................................................................................TATCACAGCCATTTTGCTGAGT........................................................	22	1	1	34.00	34	12	19	3	0	0	0
................................................................................................TATCACAGACATTTTGATGAGTT.......................................................	23	1	1	33.00	33	6	14	7	6	0	0
.................................................................................................ATCACAGCCATTTTGATGAGT........................................................	21	0	1	32.00	32	2	1	0	29	0	0
................................................................................................TATCAGAGCCATTTTGATGAGTT.......................................................	23	1	1	31.00	31	22	9	0	0	0	0
................................................................................................TAGCACAGCCATTTTGATGAGT........................................................	22	1	1	30.00	30	6	23	1	0	0	0
................................................................................................TATCACAGCCAGCTTGATGAGCT.......................................................	23	3	1	29.00	29	8	5	4	0	12	0
................................................................................................TGTCACAGCCATTTTGATGAGTT.......................................................	23	1	1	29.00	29	13	13	3	0	0	0
................................................................................................TATAACAGCCATTTTGATGAGTT.......................................................	23	1	1	28.00	28	6	20	2	0	0	0
................................................................................................TATCACAGCCATTTTGATAAGTT.......................................................	23	1	1	28.00	28	21	3	4	0	0	0
................................................................................................TATCACAGCCATTTTGATGGGTT.......................................................	23	1	1	28.00	28	9	14	3	1	1	0
................................................................................................TATCACAGCCATTTTGATGATTT.......................................................	23	1	1	27.00	27	9	16	1	1	0	0
................................................................................................TATCACAGCCAGTTTGATGAGTT.......................................................	23	1	1	26.00	26	2	22	2	0	0	0
................................................................................................TATCACGGCCATTTTGATGAGT........................................................	22	1	1	26.00	26	18	8	0	0	0	0
................................................................................................TATCACAGCCATTTTGATTAGTT.......................................................	23	1	1	25.00	25	12	11	2	0	0	0
................................................................................................TATCACAGCCATTTTCATGAGTT.......................................................	23	1	1	24.00	24	4	20	0	0	0	0
................................................................................................TATCACAGCCATTTTGATGAGAT.......................................................	23	1	1	22.00	22	13	7	1	1	0	0
................................................................................................TATCACAGCCATTTTGAAGAGT........................................................	22	1	3	21.33	64	18	35	11	0	0	0
................................................................................................TATCACAGCCATTTTGATGAGC........................................................	22	1	1	21.00	21	11	10	0	0	0	0
................................................................................................TATCACAGTCATTTTGATGAGTT.......................................................	23	1	1	20.00	20	4	12	4	0	0	0
...............................................................................................CTATCACAGCCATTTTGATGAGTT.......................................................	24	1	1	20.00	20	8	10	1	1	0	0
................................................................................................TATCACAGCCATTCTGATGAGTT.......................................................	23	1	1	20.00	20	10	10	0	0	0	0
................................................................................................TATCACAGCCATTTTAATGAGTT.......................................................	23	1	1	20.00	20	8	8	4	0	0	0
................................................................................................TATCACAGCCATTTTTATGAGTT.......................................................	23	1	1	20.00	20	11	9	0	0	0	0
................................................................................................TATCGCAGCCATTTTGATGAGTT.......................................................	23	1	1	19.00	19	5	11	3	0	0	0
................................................................................................TATCACAGCCACTTTGATGAGTT.......................................................	23	1	1	19.00	19	5	12	2	0	0	0
................................................................................................TATCACAGCCATTTTGATGAGTC.......................................................	23	1	1	19.00	19	6	12	0	1	0	0
................................................................................................TATCACAGACATTTTGATGAGT........................................................	22	1	1	18.00	18	3	7	2	6	0	0
................................................................................................TATCACAGCCATTTTGATGAGGT.......................................................	23	1	1	18.00	18	4	6	8	0	0	0
................................................................................................TATCACAGCCGTTTTGATGAGT........................................................	22	1	1	17.00	17	2	15	0	0	0	0
................................................................................................TATCACAGCTATTTTGATGAGTT.......................................................	23	1	1	17.00	17	7	7	3	0	0	0
................................................................................................TATCACAGCCATTTTGATGAGTTC......................................................	24	1	1	17.00	17	9	5	2	0	1	0
................................................................................................TAACACAGCCATTTTGATGAGTT.......................................................	23	1	1	17.00	17	8	8	1	0	0	0
................................................................................................TATCAGAGCCATTTTGATGAGT........................................................	22	1	1	16.00	16	12	4	0	0	0	0
................................................................................................TATCACAGCCATTTTGGTGAGT........................................................	22	1	1	16.00	16	4	11	1	0	0	0
................................................................................................TATCACAGCCATTTTGATGGGT........................................................	22	1	1	16.00	16	9	6	1	0	0	0
................................................................................................TATCACAGCCATTTTGATTAGT........................................................	22	1	1	16.00	16	9	6	1	0	0	0
................................................................................................TATCACACCCATTTTGATGAGTT.......................................................	23	1	1	15.00	15	6	8	1	0	0	0
.........................................................CCCATCAAACGGTTGTGAAAT................................................................................................	21	0	1	15.00	15	0	11	0	1	1	2
................................................................................................TATCACAGCCATCTTGATGAGTT.......................................................	23	1	1	15.00	15	9	4	2	0	0	0
................................................................................................TACCACAGCCATTTTGATGAGTT.......................................................	23	1	1	15.00	15	9	3	3	0	0	0
................................................................................................CATCACAGCCATTTTGATGAGTT.......................................................	23	1	1	15.00	15	7	7	1	0	0	0
................................................................................................TATCACAGCCAGTTTGATGAGT........................................................	22	1	1	14.00	14	5	9	0	0	0	0
................................................................................................TATCAAAGCCATTTTGATGAGTT.......................................................	23	1	1	14.00	14	7	5	2	0	0	0
................................................................................................AATCACAGCCATTTTGATGAGTT.......................................................	23	1	1	14.00	14	3	11	0	0	0	0
................................................................................................TATCACAGCCATTTTGATGTGT........................................................	22	1	1	14.00	14	2	11	1	0	0	0
................................................................................................TATCACAGCCATGTTGATGAGTT.......................................................	23	1	1	14.00	14	4	9	1	0	0	0
................................................................................................TATCACAGCCATTTTGATGACTT.......................................................	23	1	1	13.00	13	6	7	0	0	0	0
................................................................................................TATCACAGCCATTTCGATGAGTT.......................................................	23	1	1	13.00	13	3	9	1	0	0	0
................................................................................................TATCACAGCCATTTTGATGAGG........................................................	22	1	1	12.00	12	3	5	2	2	0	0
................................................................................................TATCACATCCATTTTGATGAGTT.......................................................	23	1	1	12.00	12	5	3	4	0	0	0
................................................................................................TATCACAACCATTTTGATGAGTT.......................................................	23	1	1	12.00	12	5	5	2	0	0	0
................................................................................................TATCACAGCCATTTTGATGAGA........................................................	22	1	1	12.00	12	6	4	1	1	0	0
................................................................................................TATTACAGCCATTTTGATGAGTT.......................................................	23	1	1	12.00	12	4	7	1	0	0	0
................................................................................................TATCACAGCCATTTTGAAGAGTT.......................................................	23	1	3	11.00	33	10	18	2	3	0	0
................................................................................................TATCACAGCCATTGTGATGAGTT.......................................................	23	1	1	11.00	11	1	7	3	0	0	0
................................................................................................TATCACAGCCATTTTGATGCGT........................................................	22	1	1	11.00	11	6	5	0	0	0	0
................................................................................................TATCACAGCCAGCTTGATGAG.........................................................	21	2	1	11.00	11	2	1	0	6	2	0
................................................................................................TATCACAGTCATTTTGATGAGT........................................................	22	1	1	11.00	11	1	7	3	0	0	0
................................................................................................TATCACAGCCATTTTGATCAGT........................................................	22	1	1	10.00	10	3	7	0	0	0	0
................................................................................................TATCATAGCCATTTTGATGAGTT.......................................................	23	1	1	10.00	10	3	5	1	0	1	0
................................................................................................TATCACAGCCATTTTGATGAGTA.......................................................	23	1	1	10.00	10	3	7	0	0	0	0
................................................................................................TATCACAGCAATTTTGATGAGTT.......................................................	23	1	1	10.00	10	4	5	1	0	0	0
................................................................................................TATCACAGCCATTTTGATCAGTT.......................................................	23	1	1	10.00	10	4	5	1	0	0	0
................................................................................................TATCACAGCCATTTTCATGAGT........................................................	22	1	1	10.00	10	3	7	0	0	0	0
...................................................................................................CACAGCCATTTTGATGAGTT.......................................................	20	0	1	10.00	10	5	1	1	1	0	2
.........................................................CCCATCAAACGGTTGTGAAA.................................................................................................	20	0	1	10.00	10	4	3	1	1	0	1
................................................................................................TATCACAGCCATTTTGAGGAGTT.......................................................	23	1	3	9.33	28	7	15	3	0	3	0
................................................................................................TATCACAGCCATTTTGTTGAGT........................................................	22	1	1	9.00	9	2	7	0	0	0	0
................................................................................................TATCACAGCCATTTTGATGAATT.......................................................	23	1	1	9.00	9	4	1	3	0	1	0
................................................................................................TATCACATCCATTTTGATGAGT........................................................	22	1	1	9.00	9	2	7	0	0	0	0
................................................................................................TATCACAGCCATTTTGAGGAGT........................................................	22	1	3	9.00	27	8	19	0	0	0	0
................................................................................................TATCACCGCCATTTTGATGAGTT.......................................................	23	1	1	9.00	9	3	5	1	0	0	0
................................................................................................TATCACAGGCATTTTGATGAGT........................................................	22	1	1	9.00	9	0	2	0	7	0	0
................................................................................................TATCACAGGCATTTTGATGAGTT.......................................................	23	1	1	9.00	9	0	0	0	9	0	0
................................................................................................TATCACAGCCATTTTGCTGCGTT.......................................................	23	2	1	9.00	9	5	3	1	0	0	0
................................................................................................TATCACAGCCATTTTTATGAGT........................................................	22	1	1	9.00	9	1	8	0	0	0	0
................................................................................................TATCACAGCCATTTTGATGA..........................................................	20	0	1	9.00	9	2	4	2	1	0	0
................................................................................................TGTCACAGCCATTTTGATGAGT........................................................	22	1	1	8.00	8	2	6	0	0	0	0
................................................................................................TATCACAGCCATTTTGATAAGT........................................................	22	1	1	8.00	8	7	0	1	0	0	0
................................................................................................TATCACAGCCATTTTGCTGATTT.......................................................	23	2	1	8.00	8	5	3	0	0	0	0
...............................................................................................CTATCACAGCCATTTTGATGAGT........................................................	23	1	1	8.00	8	5	2	1	0	0	0
................................................................................................TATCAAAGCCATTTTGATGAGT........................................................	22	1	1	8.00	8	7	0	1	0	0	0
................................................................................................TATCCCAGCCATTTTGATGAGTT.......................................................	23	1	1	8.00	8	3	4	1	0	0	0
................................................................................................TATCACAGCCTTTTTGATGAGTT.......................................................	23	1	1	8.00	8	3	3	2	0	0	0
................................................................................................TATCACAGCCATTTTGATGATCT.......................................................	23	2	1	7.00	7	3	4	0	0	0	0
................................................................................................TATCACAGCCATTTTGATGATT........................................................	22	1	1	7.00	7	2	5	0	0	0	0
................................................................................................TATGACAGCCATTTTGATGAGT........................................................	22	1	1	7.00	7	1	6	0	0	0	0
..................................................................................................TCACAGCCATTTTGATGAGTT.......................................................	21	0	1	7.00	7	4	2	1	0	0	0
................................................................................................TAGCACAGCCATTTTGTTGAGTT.......................................................	23	2	1	7.00	7	2	5	0	0	0	0
................................................................................................TATCATAGCCATTTTGATGAGT........................................................	22	1	1	7.00	7	6	1	0	0	0	0
................................................................................................TATCACAGCCATTTGGATGAGTT.......................................................	23	1	1	6.00	6	0	6	0	0	0	0
................................................................................................TATCGCAGCCATTTTGATGAGT........................................................	22	1	1	6.00	6	2	4	0	0	0	0
................................................................................................TAACACAGCCATTTTGATGAGT........................................................	22	1	1	6.00	6	2	2	2	0	0	0
................................................................................................TATCACAGCCATGTTGATGAGT........................................................	22	1	1	6.00	6	1	4	0	1	0	0
................................................................................................TATCACAGCCATTTTGATG...........................................................	19	0	1	6.00	6	1	3	0	1	0	1
................................................................................................TAGCACAGACATTTTGATGAGTT.......................................................	23	2	1	6.00	6	0	3	3	0	0	0
................................................................................................TATCACAGCCATTATGATGAGTT.......................................................	23	1	1	6.00	6	1	5	0	0	0	0
................................................................................................TATCACAGCCATTTTGATGAGTTTT.....................................................	25	1	1	6.00	6	1	4	0	1	0	0
................................................................................................TATCACAGCCATTTTGTTGTGTT.......................................................	23	2	1	6.00	6	0	4	2	0	0	0
................................................................................................TATCACAGCCACTTTGATGAGT........................................................	22	1	1	6.00	6	3	3	0	0	0	0
................................................................................................TATCACAGCCATCTTGATGAGT........................................................	22	1	1	6.00	6	2	3	0	1	0	0
....................................................................................................ACAGCCATTTTGTTGAGTT.......................................................	19	1	1	6.00	6	3	2	1	0	0	0
................................................................................................TATCACAGCCAGCTTGAGGAG.........................................................	21	3	10	5.80	58	19	11	2	14	12	0
................................................................................................TATCACAGCCATTTTGCTGAGCT.......................................................	23	2	1	5.00	5	1	4	0	0	0	0
................................................................................................TAGCACAGCCATTTTGATGAGCT.......................................................	23	2	1	5.00	5	0	5	0	0	0	0
................................................................................................TATCACAGCCATTCTGATGAGT........................................................	22	1	1	5.00	5	3	2	0	0	0	0
................................................................................................TATCACAGCCCTTTTGCTGAGTT.......................................................	23	2	1	5.00	5	0	3	2	0	0	0
................................................................................................TATCACAGCCATTTCGATGAGT........................................................	22	1	1	5.00	5	1	4	0	0	0	0
................................................................................................TATCACAGCCATTTTAATGAGT........................................................	22	1	1	5.00	5	4	0	1	0	0	0
................................................................................................TATAACAGCCATTTTGATGAGT........................................................	22	1	1	5.00	5	2	3	0	0	0	0
.....................................................................................................CAGCCATTTTGATGAGTT.......................................................	18	0	1	5.00	5	3	0	1	1	0	0
................................................................................................TAGCACAGCCATTTTGCTGAGTT.......................................................	23	2	1	5.00	5	0	5	0	0	0	0
................................................................................................TATCACAGCCATTTTGATGAGTG.......................................................	23	1	1	5.00	5	1	4	0	0	0	0
................................................................................................TATTACAGCCATTTTGATGAGT........................................................	22	1	1	5.00	5	2	3	0	0	0	0
................................................................................................TATCACAGCCATTTTGATTAG.........................................................	21	1	1	5.00	5	1	3	1	0	0	0
................................................................................................TATCACAGCGATTTTGATGAGTT.......................................................	23	1	1	5.00	5	0	5	0	0	0	0
................................................................................................TATCACAGCCAGCTTGATGAGCTT......................................................	24	3	1	5.00	5	0	1	0	0	4	0
................................................................................................TATCACAGCCATTTTGATGAGTTAA.....................................................	25	2	1	5.00	5	3	2	0	0	0	0
................................................................................................TATCACACCCATTTTGATGAGT........................................................	22	1	1	5.00	5	2	2	1	0	0	0
................................................................................................TATCACAGCCATTTTGATGACT........................................................	22	1	1	5.00	5	0	5	0	0	0	0
................................................................................................TATCACAGCCAGCTTGATGAGC........................................................	22	3	2	4.50	9	2	1	1	4	1	0
................................................................................................TATCACAGCCATTTTGAAGAGC........................................................	22	2	3	4.33	13	5	7	1	0	0	0
..................................................................................................TCACAGCCATTTTGATGAGT........................................................	20	0	1	4.00	4	2	0	0	2	0	0
................................................................................................TATAACAGCCATTTTGATGAGCT.......................................................	23	2	1	4.00	4	1	3	0	0	0	0
................................................................................................TATCACAGCCATTTTTCTGAGTT.......................................................	23	2	1	4.00	4	1	3	0	0	0	0
................................................................................................TATCTCAGCCATTTTGATGAGT........................................................	22	1	1	4.00	4	2	1	1	0	0	0
................................................................................................TATCACAGCCATTTTGCTTAGTT.......................................................	23	2	1	4.00	4	1	3	0	0	0	0
................................................................................................TATCACGGCCATTTTGATTAGTT.......................................................	23	2	1	4.00	4	2	2	0	0	0	0
................................................................................................TATCACAGCCATTTTGATTCGTT.......................................................	23	2	1	4.00	4	0	3	1	0	0	0
................................................................................................TATCACAGCCATTTTGATGCTT........................................................	22	2	1	4.00	4	0	4	0	0	0	0
................................................................................................TATCACAGCCATTTAGATGAGTT.......................................................	23	1	1	4.00	4	2	2	0	0	0	0
................................................................................................TATCACAGCCACTTTGCTGAGTT.......................................................	23	2	1	4.00	4	2	2	0	0	0	0
................................................................................................TAGCACAGCCATTTTGATGATTT.......................................................	23	2	1	4.00	4	1	3	0	0	0	0
................................................................................................TAGCACAGCCATTTTGATGAG.........................................................	21	1	1	4.00	4	2	2	0	0	0	0
.........................................................CCCATCAAACGGTTGTGA...................................................................................................	18	0	1	4.00	4	0	4	0	0	0	0
................................................................................................TAGCAGAGCCATTTTGATGAGTT.......................................................	23	2	1	4.00	4	2	2	0	0	0	0
................................................................................................TATCACAGCCATTTTGATGCG.........................................................	21	1	1	4.00	4	1	2	1	0	0	0
.................................................................................................ATCACAGCCATTTTGATGAG.........................................................	20	0	1	4.00	4	0	0	0	4	0	0
................................................................................................TATCACAGCCGTTTTGTTGAGTT.......................................................	23	2	1	4.00	4	0	4	0	0	0	0
................................................................................................GATCACAGCCATTTTGATGAGTT.......................................................	23	1	1	4.00	4	0	2	1	1	0	0
................................................................................................TATCACAGCCAGTTTGGTGAGTT.......................................................	23	2	1	4.00	4	1	2	1	0	0	0
................................................................................................TATCACAGCCAGTTTGATGAGGT.......................................................	23	2	1	4.00	4	0	4	0	0	0	0
................................................................................................TATCACAGCCCTTTTGATGAGT........................................................	22	1	1	4.00	4	1	3	0	0	0	0
................................................................................................TATCACGGCCATTTTGATGAG.........................................................	21	1	1	4.00	4	3	1	0	0	0	0
................................................................................................TATCTCAGCCATTTTGATGAGTT.......................................................	23	1	1	4.00	4	0	3	1	0	0	0
................................................................................................TATCACAGCCATTGTGATGAGT........................................................	22	1	1	4.00	4	3	1	0	0	0	0
................................................................................................TATCACAGCCATTTTGGTGTGTT.......................................................	23	2	1	4.00	4	0	2	2	0	0	0
................................................................................................TATCACAGCCAGTTTGATGAGCT.......................................................	23	2	1	3.00	3	1	2	0	0	0	0
................................................................................................TATCACAGACATTTGGATGAGTT.......................................................	23	2	1	3.00	3	1	2	0	0	0	0
................................................................................................TCTCACAGCCATTTTGCTGAGTT.......................................................	23	2	1	3.00	3	0	3	0	0	0	0
................................................................................................TATCACAGCCATTTTGATGAGTTG......................................................	24	1	1	3.00	3	1	2	0	0	0	0
................................................................................................TATCACAGCCCTTTTGTTGAGTT.......................................................	23	2	1	3.00	3	0	2	1	0	0	0
................................................................................................TAGCACAGCCATTTTGATGAGC........................................................	22	2	1	3.00	3	1	2	0	0	0	0
................................................................................................TAGCACAGCCATTTTGATGAGG........................................................	22	2	1	3.00	3	0	3	0	0	0	0
................................................................................................GATCACAGCCATTTTGATGAGT........................................................	22	1	1	3.00	3	0	1	2	0	0	0
................................................................................................TATCACAGCCAGTTTAATGAGTT.......................................................	23	2	1	3.00	3	0	3	0	0	0	0
................................................................................................TAGCACAGCCATTTTGTTGAGT........................................................	22	2	1	3.00	3	1	2	0	0	0	0
................................................................................................TAGCACAGCCATTTTGATGCGTT.......................................................	23	2	1	3.00	3	0	2	1	0	0	0
................................................................................................TAGCACAGTCATTTTGATGAGTT.......................................................	23	2	1	3.00	3	0	2	1	0	0	0
................................................................................................TATCACAGCCATTTTGTTGAGCT.......................................................	23	2	1	3.00	3	1	2	0	0	0	0
................................................................................................TATCACAGACATTTTGCTGAGTT.......................................................	23	2	1	3.00	3	0	3	0	0	0	0
................................................................................................TATCACCGCCATTTTGATGAGT........................................................	22	1	1	3.00	3	1	2	0	0	0	0
................................................................................................TATCACAGCCATTTTGAT............................................................	18	0	1	3.00	3	0	2	0	0	0	1
................................................................................................TATCACAGTCATTTTGATGTGTT.......................................................	23	2	1	3.00	3	0	3	0	0	0	0
................................................................................................TATCACAGCCATTTTTATGCGTT.......................................................	23	2	1	3.00	3	1	2	0	0	0	0
................................................................................................TATCACAGCGATTTTGATGAGT........................................................	22	1	1	3.00	3	0	3	0	0	0	0
................................................................................................TATCACAGCCAGGTTGATGAGTT.......................................................	23	2	1	3.00	3	0	2	1	0	0	0
................................................................................................TATCACTGCCATTTTGATGAGTT.......................................................	23	1	1	3.00	3	2	1	0	0	0	0
................................................................................................TATCACAGCCTTTTTGATGAGT........................................................	22	1	1	3.00	3	3	0	0	0	0	0
................................................................................................TAGCACAGCCATTGTGATGAGT........................................................	22	2	1	3.00	3	1	2	0	0	0	0
................................................................................................TATCACAGCCATTTTGGTGAGGT.......................................................	23	2	1	3.00	3	0	0	3	0	0	0
..................................................................................................TCACAGCCATTTTGATGAG.........................................................	19	0	1	3.00	3	2	1	0	0	0	0
................................................................................................TATCACAGCAATTTTGATGAGT........................................................	22	1	1	3.00	3	0	3	0	0	0	0
................................................................................................TATCACAGCCATTTTTGTGAGTT.......................................................	23	2	1	3.00	3	0	3	0	0	0	0
................................................................................................TATCACAGCCATTTTTATTAGTT.......................................................	23	2	1	3.00	3	1	2	0	0	0	0
................................................................................................TATCACAGCCATTTTGCTGCGT........................................................	22	2	1	3.00	3	1	2	0	0	0	0
................................................................................................TAGCACAGCCGTTTTGATGAGTT.......................................................	23	2	1	3.00	3	1	2	0	0	0	0
................................................................................................TATGACAGCCATTTTGATGAGTT.......................................................	23	1	1	3.00	3	0	2	1	0	0	0
................................................................................................AATCACAGCCATTTTGATGAGT........................................................	22	1	2	3.00	6	3	1	1	1	0	0
................................................................................................TATCACAGACAGTTTGATGAGTT.......................................................	23	2	1	3.00	3	1	2	0	0	0	0
................................................................................................TATCACAGCCCTTTTGATGCGT........................................................	22	2	1	3.00	3	0	3	0	0	0	0
................................................................................................TAGCACAGCCATTTTGAAGAGT........................................................	22	2	3	2.67	8	0	7	1	0	0	0
................................................................................................TATCAGAGTCATTTTGATGAGTT.......................................................	23	2	1	2.00	2	1	1	0	0	0	0
................................................................................................TATCACAGCCATTTTGATGAGTAA......................................................	24	2	1	2.00	2	1	1	0	0	0	0
................................................................................................TATCACAGCCATTTTGATCAGC........................................................	22	2	1	2.00	2	0	2	0	0	0	0
................................................................................................TATCACAGACATTTTGTTGAGTT.......................................................	23	2	1	2.00	2	0	2	0	0	0	0
................................................................................................TATCACTGCCAGTTTGATGAGTT.......................................................	23	2	1	2.00	2	1	1	0	0	0	0
................................................................................................TATCACAGCCATTCTGCTGAGTT.......................................................	23	2	1	2.00	2	0	2	0	0	0	0
................................................................................................TATCACGGCCATTTTGATGAGTTT......................................................	24	1	1	2.00	2	2	0	0	0	0	0
................................................................................................TATCACAGTTATTTTGATGAGTT.......................................................	23	2	1	2.00	2	2	0	0	0	0	0
................................................................................................TATCACAGCCATTTTTCTTAGTT.......................................................	23	3	1	2.00	2	0	1	1	0	0	0
................................................................................................CATCACAGCCAGTTTGATGAGT........................................................	22	2	1	2.00	2	0	2	0	0	0	0
................................................................................................TATCCCAGCCATTTTGCTGAGTT.......................................................	23	2	1	2.00	2	0	2	0	0	0	0
................................................................................................TATCACAGCCATTTTGCTGACTT.......................................................	23	2	1	2.00	2	0	2	0	0	0	0
................................................................................................TAGCACAGCCATTTTTATGAGTT.......................................................	23	2	1	2.00	2	0	2	0	0	0	0
................................................................................................TATCACAGCCATCTTGGTGAGTT.......................................................	23	2	1	2.00	2	0	2	0	0	0	0
................................................................................................TATCACAGCCATTCTGATGCGT........................................................	22	2	1	2.00	2	2	0	0	0	0	0
................................................................................................TATGACAGCGATTTTGATGAGTT.......................................................	23	2	1	2.00	2	0	1	1	0	0	0
....................................................................................................ACAGCCATTTTGATGAGTTT......................................................	20	0	1	2.00	2	0	2	0	0	0	0
................................................................................................TATCACAACAATTTTGGTGAGTT.......................................................	23	3	1	2.00	2	0	2	0	0	0	0
................................................................................................TATCACAGCCATATTGATGAGTT.......................................................	23	1	1	2.00	2	1	1	0	0	0	0
................................................................................................TATCACAGCCATTTTGATGGGCT.......................................................	23	2	1	2.00	2	1	1	0	0	0	0
................................................................................................TATCACAGCCATTTTGTTGAGC........................................................	22	2	1	2.00	2	0	2	0	0	0	0
................................................................................................TATCACAGCCATTTTGATGAGATT......................................................	24	1	1	2.00	2	2	0	0	0	0	0
................................................................................................TATCACAGCCATTGTGAAGAGC........................................................	22	3	3	2.00	6	2	4	0	0	0	0
................................................................................................TATCACAGCCACTTTGATGAGC........................................................	22	2	1	2.00	2	1	1	0	0	0	0
................................................................................................TATCACAGCCATTTTGCTGCGCT.......................................................	23	3	1	2.00	2	1	1	0	0	0	0
................................................................................................TATCACAGCCCTTTTTATGAGTT.......................................................	23	2	1	2.00	2	0	1	1	0	0	0
................................................................................................TAGCACAGCCATTTTCATGAGTT.......................................................	23	2	1	2.00	2	1	1	0	0	0	0
................................................................................................TATCACAGCCATTTTGATGAAT........................................................	22	1	1	2.00	2	1	0	1	0	0	0
................................................................................................GATCACAGCCATTTTGATGAGCT.......................................................	23	2	1	2.00	2	2	0	0	0	0	0
................................................................................................TGGCACAGCCATTTTGTTGAGTT.......................................................	23	3	1	2.00	2	0	2	0	0	0	0
................................................................................................TATCACAGCCATTTTGATGCTGT.......................................................	23	3	2	2.00	4	0	2	2	0	0	0
................................................................................................TATCACAGCTATTTTGATGAGT........................................................	22	1	1	2.00	2	1	1	0	0	0	0
................................................................................................TATCACAGCCATTTTGTTGAGA........................................................	22	2	1	2.00	2	0	2	0	0	0	0
....................................................................................................ACAGCCATGTTGATGAGTT.......................................................	19	1	1	2.00	2	0	2	0	0	0	0
................................................................................................TAGCACAACCATTTTGATGAGTT.......................................................	23	2	1	2.00	2	0	2	0	0	0	0
....................................................................................................ACAGCCATTTTGATGAGTTA......................................................	20	1	1	2.00	2	0	1	1	0	0	0
................................................................................................TATCACAGTCATTTTGATGAGGT.......................................................	23	2	1	2.00	2	1	0	1	0	0	0
................................................................................................TATCACAGACATTTTGATGAGC........................................................	22	2	1	2.00	2	0	2	0	0	0	0
................................................................................................TATCACAGCAATTTTGATGAGAT.......................................................	23	2	1	2.00	2	0	2	0	0	0	0
................................................................................................TAGCAAAGCCATTTTGATGAGTT.......................................................	23	2	1	2.00	2	0	2	0	0	0	0
................................................................................................TCTCCCAGCCATTTTGATGAGTT.......................................................	23	2	1	2.00	2	0	1	1	0	0	0
................................................................................................TACCACAGCCATTTTGATGAGT........................................................	22	1	1	2.00	2	1	1	0	0	0	0
................................................................................................TATCGCAGCCATTTTGATGCGTT.......................................................	23	2	1	2.00	2	0	2	0	0	0	0
................................................................................................TATCACACCCATTTTCATGAGTT.......................................................	23	2	1	2.00	2	0	2	0	0	0	0
................................................................................................TATCACAGCCCTTTTGATGTGTT.......................................................	23	2	1	2.00	2	1	0	1	0	0	0
................................................................................................TATCACAGCCATTTTGATGAGTCT......................................................	24	1	1	2.00	2	0	1	0	0	1	0
................................................................................................TATCACAGAAATTTTTATGAGTT.......................................................	23	3	1	2.00	2	0	2	0	0	0	0
................................................................................................TATCACAGCCATTTTGCTGTGTT.......................................................	23	2	1	2.00	2	0	2	0	0	0	0
................................................................................................TAACACAGCCAGTTTAATGAGTT.......................................................	23	3	1	2.00	2	0	2	0	0	0	0
................................................................................................TACCACAGCCATTTTCATGAGTT.......................................................	23	2	1	2.00	2	0	2	0	0	0	0
................................................................................................TATCACAGACATTTTGATGAGTTT......................................................	24	1	1	2.00	2	0	2	0	0	0	0
................................................................................................TATCACCGCCATTTTGATGCGTT.......................................................	23	2	1	2.00	2	0	2	0	0	0	0
................................................................................................TATCACAGCCACTTTCATGAGTT.......................................................	23	2	1	2.00	2	0	2	0	0	0	0
................................................................................................TATCACAGCCATTGTGGTGAGTT.......................................................	23	2	1	2.00	2	0	1	1	0	0	0
................................................................................................TATCACAGCCTTTTTGCTGAGTT.......................................................	23	2	1	2.00	2	0	2	0	0	0	0
................................................................................................TATCACAGCCATTTTGCTGATT........................................................	22	2	1	2.00	2	1	1	0	0	0	0
................................................................................................TATCACGGCCGTTTTGATGAGTT.......................................................	23	2	1	2.00	2	1	1	0	0	0	0
................................................................................................TATCACAGCCATTTTGATGCTTT.......................................................	23	2	1	2.00	2	0	2	0	0	0	0
.........................................................CCCATCAAACGGTTGTGAAATGA..............................................................................................	23	1	1	2.00	2	0	0	0	0	0	2
................................................................................................TATCACAGCCATTTTGATGATAT.......................................................	23	2	1	2.00	2	1	1	0	0	0	0
................................................................................................AATCACAGCCATTTTGATGCGTT.......................................................	23	2	1	2.00	2	0	2	0	0	0	0
................................................................................................AATCACAGCCATTTTGATGATTT.......................................................	23	2	1	2.00	2	1	1	0	0	0	0
................................................................................................TATCACAGCCATGTTGATGAG.........................................................	21	1	1	2.00	2	0	2	0	0	0	0
................................................................................................TATCACAGCCAGTTTGATGTGTT.......................................................	23	2	1	2.00	2	0	2	0	0	0	0
................................................................................................TCTCACAGCCATTTTGATGAGT........................................................	22	1	1	2.00	2	0	1	1	0	0	0
................................................................................................TAGCACAGCCATTTTGATGTGTT.......................................................	23	2	1	2.00	2	0	2	0	0	0	0
................................................................................................TATCACAGCCATTTTGATTCGT........................................................	22	2	1	2.00	2	2	0	0	0	0	0
.................................................................................................ATCACAGCCATTTTGATGAGTTT......................................................	23	0	1	2.00	2	0	1	0	1	0	0
................................................................................................TATCACAGCCAGTTTGCTGAGTT.......................................................	23	2	1	2.00	2	1	1	0	0	0	0
................................................................................................TATCAGAGCCATTTTGCTGAGTT.......................................................	23	2	1	2.00	2	0	2	0	0	0	0
................................................................................................TAGCACAGCCACTTTGATGAGTT.......................................................	23	2	1	2.00	2	0	2	0	0	0	0
................................................................................................TATCACAGCCATTTCGCTGAGTT.......................................................	23	2	1	2.00	2	2	0	0	0	0	0
................................................................................................TATCACTGCCAGTTTGATGTGTT.......................................................	23	3	1	2.00	2	0	2	0	0	0	0
................................................................................................CATCACAGCCATTTTGATGAGT........................................................	22	1	1	2.00	2	2	0	0	0	0	0
................................................................................................TAACACACCCATTTTGATGACTT.......................................................	23	3	1	2.00	2	2	0	0	0	0	0
................................................................................................TATCACAGCCAGTTTGATGAGG........................................................	22	2	1	2.00	2	0	1	1	0	0	0
................................................................................................TATCACAGCCATTTTGATGATC........................................................	22	2	1	2.00	2	0	2	0	0	0	0
................................................................................................TATCACGGCCATTTTTATGAGT........................................................	22	2	1	2.00	2	0	2	0	0	0	0
................................................................................................TATCACACCCATTTTGATGGGTT.......................................................	23	2	1	2.00	2	0	2	0	0	0	0
................................................................................................TATTACAGCCAGTTTGATGAGTT.......................................................	23	2	1	2.00	2	0	2	0	0	0	0
................................................................................................TATCACAGCCATTTTGATGTG.........................................................	21	1	1	2.00	2	0	2	0	0	0	0
................................................................................................TATCACAGCCATTTTGATTAGAT.......................................................	23	2	1	2.00	2	1	1	0	0	0	0
..................................................................................................TATCAGCCATTTTGATGAGTT.......................................................	21	2	1	2.00	2	1	0	1	0	0	0
................................................................................................TATCACAGCCAGTTGGATGAGTT.......................................................	23	2	1	2.00	2	0	2	0	0	0	0
.........................................................CCCATCAAACGTTTGTGAAATG...............................................................................................	22	1	1	2.00	2	0	0	0	0	0	2
................................................................................................TCTCACATCCATTTTGATGAGTT.......................................................	23	2	1	2.00	2	0	1	1	0	0	0
................................................................................................TAACACAGCCATTTTGATGTGT........................................................	22	2	1	2.00	2	0	2	0	0	0	0
................................................................................................GATCACAGCCAGTTTGATGAGTT.......................................................	23	2	1	2.00	2	1	0	1	0	0	0
................................................................................................TATCACAGCCATTTTTATGAGC........................................................	22	2	1	2.00	2	1	1	0	0	0	0
................................................................................................TATCACAGCCAGTTTGCTGCGTT.......................................................	23	3	1	2.00	2	1	1	0	0	0	0
.................................................................................................ATCACAGCGATTTTGATGAGTT.......................................................	22	1	1	2.00	2	0	0	0	2	0	0
................................................................................................TATCACAGCCATTTTGATGTGTC.......................................................	23	2	1	2.00	2	1	1	0	0	0	0
.......................................................................................................................TCGTGTGGAATGGCCAGC.....................................	18	0	1	2.00	2	0	2	0	0	0	0
................................................................................................TATCACAGCCAGTTTGATGTGT........................................................	22	2	1	2.00	2	0	2	0	0	0	0
................................................................................................AATCACAGCCATTTTGCTGAGTT.......................................................	23	2	1	2.00	2	0	2	0	0	0	0
................................................................................................TATCACAGCCATGTTGATGTGTT.......................................................	23	2	1	2.00	2	0	2	0	0	0	0
................................................................................................TATCACAGCCATTTTTATGAGGT.......................................................	23	2	1	2.00	2	0	2	0	0	0	0
................................................................................................TATAACAGCCATTGTGATGAGTT.......................................................	23	2	1	2.00	2	0	1	1	0	0	0
................................................................................................TATCACACACATTTTGTTGAGTT.......................................................	23	3	1	2.00	2	0	2	0	0	0	0
...................................................................................................CACAGCCATTTTGATGAGT........................................................	19	0	1	2.00	2	0	0	2	0	0	0

CACAAGCCGAGCATGATAAACCTGTTTTTTTTTTGGCAGTAGGGGTATGAATGCATTGGGTAGTTTGCCAACACTTTACAACGTAAATAGTTTAGTATAGTGTCGGTAAAACTACTCAAAGCACACCTTACCGGTCGTTAGGTAGTAGCTAGCCCCGTCCCGTCCTACCTCGTG **************************************.((((.((((((.(((.(((((((.((((((((.(((...............))).))))))))..))))))).))).)))).)).))))..****************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V057 head	V050 head	V111 male body
........................................................TGGGTAGTTTACCGACACTAT.................................................................................................	21	3	3	0.33	1	0	1	0
.........................TGTTATTTTGGCAGAAGGGGT................................................................................................................................	21	3	4	0.25	1	1	0	0
...............................ATTGGCAGTAGGGCGATGA............................................................................................................................	19	3	12	0.08	1	0	0	1
.............................TCTTTGGCAGTAGGGGGAG..............................................................................................................................	19	3	20	0.05	1	1	0	0
..................................................................................................................................CCGGTCGATAACTAGTAGC.........................	19	3	20	0.05	1	1	0	0

Species	Coordinate	ID	Type	Alignment
droPer2	scaffold_0:10660033-10660206 -	dpe-mir-13a	Known_mirbase	G--TGTTCGGCTCGTACTA-------TTTG------------GA--------------------------------------------------------CAAAAA--AAAAACCGTCATCCC-CATACTTACGTAACCCATCAAAC-GGTTGTGAAATGTTGCA-TTT--A-TCAAATCATATCACAGCCATTTTGATGAGTTTCGTGTGGA--ATGG-CCA------GC--------------------A-ATC--------CAT------------CATCGATC-----GGGGC-------------------------------AGGGCAGGATGGAGCAC
dp5	2:9824887-9825062 +	dps-mir-13a	Known_mirbase	G--TGTTCGGCTCGTACTT-------TTTG------------GA--------------------------------------------------------CAAAAAAAAAAAACCGTCAGCCC-CATACTTACGTAACCCATCAAAC-GGTTGTGAAATGTTGCA-TTT--A-TCAAATCATATCACAGCCATTTTGATGAGTTTCGTGTGGA--ATGG-CCA------GC--------------------A-ATC--------CAT------------CATCGATC-----GGGGC-------------------------------AGGGCAGGATGGAGCAC
droWil2	scf2_1100000004902:2143180-2143339 -	dwi-mir-13a	Known_mirbase	G--TGTTTT-----------------TTTG------------GA--ATC-----------CGT------------------TCCGGCA-A-------------AAG---------AT--G--GAATTTCTTACGTAACTCTTCAAGGGGGTTGTGAAATGTTGCC-ATTTTATTCAACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAGTATT------CCTGCAACAGTATT--------CGA---AATGGA--------------------------------------------------------------TGGTATC----------------CTT
droVir3	scaffold_13047:13335569-13335764 +	dvi-mir-13a	Known_mirbase	G--TGTTTGCATCTTATTA-------C-------------------------------------------------GGTGATAGAT-AACGTCGCTTCGATACGTA--AAGACCAACCCACTC-AATTCTTGCGTAACTCTTCAAGG-GGTTGTGAAATGTTGCC-GTT--A-TCAAGTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TTGCT--T------A---------------------AATT---------CATTGCCCTCGTCGGCA--GAATGGGCTG--GCA--AGGACGAT------------------------------------T
droMoj3	scaffold_6540:10568301-10568481 +	dmo-mir-13a	Known_mirbase	G--TGTTTGCATCTCATTA-------TATG------------G-------------------------------------------------------GACACTTAACGATCTCCGCCCATTC-AATTCTTGCGTAACTCTTCAAGG-GGTTGTGAAATGTAGCC-ATT--A-TCAAGTCATATCACAGCCATTTTGATGAGTTTCGTGTGAA--TTGCT--TTCAGCA------------------------TTG--------TCC------------CATCC---------------------G------------TTT-TGTGTCACTGGATTATCCACCTC
droGri2	scaffold_14906:4357635-4357831 -	dgr-mir-13a	Known_mirbase	G--TGTTTGTATCTCATTA-------T-------------TTTA--TTCTTGCATACATCTGC-----AGACTGTGAGCGAACCAAGC-----------------------------CCACCC-AATTCTTGCGTAACTCTTCAAGG-GGTTGTGAAATGTGGG-TATT--A-TCAAGTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TTGCT--TTC----A-----------------------T-CACAGTGATCAT------------TGTCCCTC-----GCCGGGG----CCG------------GTT-CGTG------------------C
droAna3	scaffold_13340:12827581-12827746 -	dan-mir-13a	Known_mirbase	G--TGTGCTA-----------------CAA------------GA--ATC-----------CCC----TCAAA---------------------------------A--AAGGACGATCCATCG-AGTTCTTACGTAACTCCTCAAAG-GGCTGTGAAATGTTGCC-ATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGGGAA--TCG--TCA------GA--------------------A-AAC--------CGT------------CA--GAAAGGGGCGCGGCGGCAGG---ATGT----------------------------------C
droBip1	scf7180000396691:1710473-1710635 -			G--TGTTCTC---------GAAG-------------------------C------------------------CCCCCTAACCCGA---------------------------AGATCCATCC-AGTTCTTACGTAACTCTTCAAGG-GGCTGTGAAATGTTGC--ATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TTCC--AA------A---------------------AAATCG-------CAT------------CGTGGGGC-----GCGGCAG----GCGATTTCGTA-----------------------------AC
droKik1	scf7180000302639:1443170-1443319 +			G--AGTCTGC---------G----------------------GA----------------TAAGCCAACAAGTGTTTGTGATCCAAGA-T-----------------------------GTCT-GATTCTTACGTAACTCTTCAAAG-GGCTGTGAAATGTTACC-GTT--A-TCTATCCATATCACAGCCATTTTGATGAGTTCCGTGTGAA--TT------TCGGCAGCCAG-----------------AAGG---------------------------------------------------AG----------------------------------TAC
droFic1	scf7180000452523:592225-592374 -			G--TGT---------------------------------------------------------------------TCGTGATCCCATA-T-----------------------------A--T-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTGTCTGTT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TT------TCGGCAGCTGGGCA----------A---ATATCA---------------------------------------------A---TTTCCATAACCGATTGTATC------------------C
droEle1	scf7180000491080:1007096-1007234 -			G--TGT---------------------------------------------------------------------TCGTGATCCGACA-T-----------------------------A--T-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTCCC-ACT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TT------TCAGCAACTGGATA---------GACATAAATCA---------------------------------------------G---TTTTTA--------------------------------T
droRho1	scf7180000779250:92647-92788 +			G--TGT---------------------------------------------------------------------TCGTGATATAT-A-TGTCG----GAT------------------A--T-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTGCCTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TT------TCGGCAGCTGGGCT----------A---AAATCA---------------------------------------------A---GTTTCA--------------------------------T
droBia1	scf7180000302136:835521-835657 -			G--TGT---------------------------------------------------------------------TCGTGATCCAACA-T-----------------------------A--T-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTGCCCACT--G-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TT------TCGGCAGCCGGTCA----------A---AAATCG---------------------------------------------C---ATTTCGCA-------------------------------
droTak1	scf7180000415769:1925962-1926092 +			G--TGT---------------------------------------------------------------------TCGTGATCCAACA-T-----------------------------A--T-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTGTCTATT--A-TCCACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TT------TCGGCAGCTGGGCA----------C-TAAAATCA---------------------------------------------------------------------------------------T
droEug1	scf7180000409281:109523-109673 +			G--TGT---------------------------------------------------------------------TCGTGATCCGATA-T-----------------------------A--T-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTGCCTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAG--TT------TCGGCATCTGGTCA----------A---AG-TTA------TTA------------------------------------T---ATTTCATAACCGATT-TATT------------------C
dm3	chr3R:11243236-11243409 -	dme-mir-13a	Known_mirbase	GCCAGTTCGC---------GAATTGG----GCATAACGATTGGA--TGC-----------TAAACCAACAAGTGTTTGTGATCCAAGC-C-----------------------------A--T-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTCGACTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TC------GCGGCAGCGGATCA----------A---AAAACA---------------------------------------------------------------------------------------T
droSim2	3r:9985565-9985728 +	dsi-mir-13a	Known_mirbase	G--TAT----------------------------AACGATTGGATATGC-----------TAAACCAACAAGTGTTCGTGATCCAAGC-C-----------------------------A--T-AGTTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTCGACTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TC------TCGGCAGCGGATCG----------A---AAAACA---------------------------------------------T---ATTT----------------------------------C
droSec2	scaffold_0:10704999-10705175 +	dse-mir-13a	Known_mirbase	C--AGTTCGC---------GAATTGG----GTATAACGATTGGA--TGC-----------TAAGCCAACAAGTGTTCGTGATCCAAGC-C-----------------------------A--T-AGTTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTCGACTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TC------TGGTCAGCGGATCG----------A---AAAACA---------------------------------------------T---ATTT----------------------------------C
droYak3	3R:15188547-15188707 +	dya-mir-13a	Known_mirbase	T--TG-------------------------------------GA--TGC-----------TAAGCCAACAAGTGTTCGTGATCCAAGC-C-----------------------------A--T-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTCGCCTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TC------TCGGCAACTTATTTCATGTATTTC-----AAACA---------------------------------------------T---ATTT----------------------------------C
droEre2	scaffold_4770:10769369-10769539 -	der-mir-13a	Known_mirbase	C--GATTGG---------------------GGATAACGATTGGA--TGC-----------TAAGCCAACAAGTGTTCGTGATCCAAGA-C-----------------------------A--C-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTCGACTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TT------TAAAAAGCGGGTTA----------A-G-AAAACA---------------------------------------------T---ATTTCA---------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droPer2

G--TGTTCGGCTCGTACTA-------TTTG------------GA--------------------------------------------------------CAAAAA--AAAAACCGTCATCCC-CATACTTACGTAACCCATCAAAC-GGTTGTGAAATGTTGCA-TTT--A-TCAAATCATATCACAGCCATTTTGATGAGTTTCGTGTGGA--ATGG-CCA------GC--------------------A-ATC--------CAT------------CATCGATC-----GGGGC-------------------------------AGGGCAGGATGGAGCAC	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTT.............................................................................................................................................	23	1	14724.00	14724	17	346	2279	6576	5406	100
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGT..............................................................................................................................................	22	1	4959.00	4959	5	316	363	2380	1863	32
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAG...............................................................................................................................................	21	1	477.00	477	1	45	9	257	162	3
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTT............................................................................................................................................	24	1	361.00	361	0	6	5	153	189	8
.........................................................................................................................................................................................ACAGCCATTTTGATGAGTT.............................................................................................................................................	19	1	147.00	147	0	0	16	70	61	0
.........................................................................................................................................CCCATCAAAC-GGTTGTGAAATG.........................................................................................................................................................................................	22	1	93.00	93	13	4	48	8	20	0
.........................................................................................................................................................................................ACAGCCATTTTGATGAGT..............................................................................................................................................	18	1	58.00	58	0	0	3	31	24	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGTT.............................................................................................................................................	22	1	42.00	42	3	31	1	3	4	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTA............................................................................................................................................	24	1	40.00	40	0	1	5	12	22	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGT..............................................................................................................................................	21	1	32.00	32	0	29	0	2	1	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGC..............................................................................................................................................	22	1	21.00	21	0	0	0	11	10	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTC.............................................................................................................................................	23	1	19.00	19	0	1	0	6	12	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTC............................................................................................................................................	24	1	17.00	17	0	0	2	9	5	1
.........................................................................................................................................CCCATCAAAC-GGTTGTGAAAT..........................................................................................................................................................................................	21	1	15.00	15	2	1	0	0	11	1
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGG..............................................................................................................................................	22	1	12.00	12	0	2	2	3	5	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGA..............................................................................................................................................	22	1	12.00	12	0	1	1	6	4	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTA.............................................................................................................................................	23	1	10.00	10	0	0	0	3	7	0
........................................................................................................................................................................................CACAGCCATTTTGATGAGTT.............................................................................................................................................	20	1	10.00	10	2	1	1	5	1	0
.........................................................................................................................................CCCATCAAAC-GGTTGTGAAA...........................................................................................................................................................................................	20	1	10.00	10	1	1	1	4	3	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGA................................................................................................................................................	20	1	9.00	9	0	1	2	2	4	0
.......................................................................................................................................................................................TCACAGCCATTTTGATGAGTT.............................................................................................................................................	21	1	7.00	7	0	0	1	4	2	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATG.................................................................................................................................................	19	1	6.00	6	1	1	0	1	3	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTTT...........................................................................................................................................	25	1	6.00	6	0	1	0	1	4	0
..........................................................................................................................................................................................CAGCCATTTTGATGAGTT.............................................................................................................................................	18	1	5.00	5	0	1	1	3	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTG.............................................................................................................................................	23	1	5.00	5	0	0	0	1	4	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTAA...........................................................................................................................................	25	1	5.00	5	0	0	0	3	2	0
.......................................................................................................................................................................................TCACAGCCATTTTGATGAGT..............................................................................................................................................	20	1	4.00	4	0	2	0	2	0	0
.........................................................................................................................................CCCATCAAAC-GGTTGTGA.............................................................................................................................................................................................	18	1	4.00	4	0	0	0	0	4	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAG...............................................................................................................................................	20	1	4.00	4	0	4	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTG............................................................................................................................................	24	1	3.00	3	0	0	0	1	2	0
.....................................................................................................................................................................................TATCACAGCCATTTTGAT..................................................................................................................................................	18	1	3.00	3	1	0	0	0	2	0
.......................................................................................................................................................................................TCACAGCCATTTTGATGAG...............................................................................................................................................	19	1	3.00	3	0	0	0	2	1	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTAA............................................................................................................................................	24	1	2.00	2	0	0	0	1	1	0
.........................................................................................................................................................................................ACAGCCATTTTGATGAGTTT............................................................................................................................................	20	1	2.00	2	0	0	0	0	2	0
.........................................................................................................................................................................................ACAGCCATTTTGATGAGTTA............................................................................................................................................	20	1	2.00	2	0	0	1	0	1	0
.........................................................................................................................................CCCATCAAAC-GGTTGTGAAATGA........................................................................................................................................................................................	23	1	2.00	2	2	0	0	0	0	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGTTT............................................................................................................................................	23	1	2.00	2	0	1	0	0	1	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGATC..............................................................................................................................................	22	1	2.00	2	0	0	0	0	2	0
............................................................................................................................................................................................................TCGTGTGGA--ATGG-CCA------GC--------------------..............................................................................................	18	1	2.00	2	0	0	0	0	2	0
........................................................................................................................................................................................CACAGCCATTTTGATGAGT..............................................................................................................................................	19	1	2.00	2	0	0	2	0	0	0

dp5

G--TGTTCGGCTCGTACTT-------TTTG------------GA--------------------------------------------------------CAAAAAAAAAAAACCGTCAGCCC-CATACTTACGTAACCCATCAAAC-GGTTGTGAAATGTTGCA-TTT--A-TCAAATCATATCACAGCCATTTTGATGAGTTTCGTGTGGA--ATGG-CCA------GC--------------------A-ATC--------CAT------------CATCGATC-----GGGGC-------------------------------AGGGCAGGATGGAGCAC	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTT.............................................................................................................................................	23	1	56311.00	56311	0	1841	29783	9000	8997	6423	191	1	0	75
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGT..............................................................................................................................................	22	1	15200.00	15200	0	734	2925	7674	1277	2500	73	1	0	16
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTC.............................................................................................................................................	23	1	3063.00	3063	0	2	2672	379	6	3	1	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGC..............................................................................................................................................	22	1	1455.00	1455	0	0	479	966	2	8	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAG...............................................................................................................................................	21	1	1058.00	1058	0	91	90	549	49	271	5	0	1	2
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTT............................................................................................................................................	24	1	1054.00	1054	0	38	408	412	39	148	7	0	0	2
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGTT.............................................................................................................................................	22	1	368.00	368	0	142	127	95	2	2	0	0	0	0
.........................................................................................................................................CCCATCAAAC-GGTTGTGAAATG.........................................................................................................................................................................................	22	1	333.00	333	0	45	49	3	217	10	0	0	0	9
.........................................................................................................................................................................................ACAGCCATTTTGATGAGTT.............................................................................................................................................	19	1	187.00	187	0	1	7	5	91	83	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGA................................................................................................................................................	20	1	160.00	160	0	27	5	119	1	8	0	0	0	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGT..............................................................................................................................................	21	1	160.00	160	0	56	7	94	1	2	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTC............................................................................................................................................	24	1	133.00	133	0	1	78	44	4	6	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTA............................................................................................................................................	24	1	119.00	119	0	8	63	28	6	9	3	0	0	2
.......................................................................................................................................................................................TCACAGCCATTTTGATGAGTT.............................................................................................................................................	21	1	80.00	80	0	8	31	20	17	2	0	0	0	2
.....................................................................................................................................................................................TATCACAGCCATTTTGATG.................................................................................................................................................	19	1	51.00	51	0	13	3	29	2	4	0	0	0	0
.........................................................................................................................................................................................ACAGCCATTTTGATGAGT..............................................................................................................................................	18	1	46.00	46	0	0	2	0	13	31	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTG.............................................................................................................................................	23	1	40.00	40	0	0	28	6	5	1	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGA..............................................................................................................................................	22	1	34.00	34	0	4	5	18	0	7	0	0	0	0
........................................................................................................................................................................................CACAGCCATTTTGATGAGTT.............................................................................................................................................	20	1	34.00	34	0	2	11	14	1	6	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAC...............................................................................................................................................	21	1	25.00	25	0	0	7	18	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTA.............................................................................................................................................	23	1	24.00	24	0	0	10	6	5	3	0	0	0	0
.......................................................................................................................................................................................TCACAGCCATTTTGATGAGT..............................................................................................................................................	20	1	23.00	23	0	3	1	16	1	1	0	0	0	1
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGTC.............................................................................................................................................	22	1	17.00	17	0	0	13	4	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGAC.............................................................................................................................................	23	1	16.00	16	0	0	14	2	0	0	0	0	0	0
.........................................................................................................................................CCCATCAAAC-GGTTGTGAAA...........................................................................................................................................................................................	20	1	15.00	15	0	2	5	1	1	6	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGCC.............................................................................................................................................	23	1	13.00	13	0	0	11	1	0	1	0	0	0	0
.........................................................................................................................................CCCATCAAAC-GGTTGTGAAAT..........................................................................................................................................................................................	21	1	12.00	12	0	2	5	2	2	1	0	0	0	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGTTT............................................................................................................................................	23	1	10.00	10	0	3	0	7	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTG............................................................................................................................................	24	1	10.00	10	0	0	3	3	1	3	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGG..............................................................................................................................................	22	1	10.00	10	0	0	0	2	6	2	0	0	0	0
..........................................................................................................................................CCATCAAAC-GGTTGTGAAATG.........................................................................................................................................................................................	21	1	9.00	9	0	5	0	0	4	0	0	0	0	0
........................................................................................................................................................................................CACAGCCATTTTGATGAGT..............................................................................................................................................	19	1	9.00	9	0	2	1	5	1	0	0	0	0	0
..........................................................................................................................................................................................CAGCCATTTTGATGAGTT.............................................................................................................................................	18	1	9.00	9	0	1	4	0	2	2	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAA...............................................................................................................................................	21	1	9.00	9	0	1	0	8	0	0	0	0	0	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGC..............................................................................................................................................	21	1	7.00	7	0	0	0	7	0	0	0	0	0	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAG...............................................................................................................................................	20	1	7.00	7	0	5	0	2	0	0	0	0	0	0
....................................................................................................................................................................................ATATCACAGCCATTTTGATGAGTT.............................................................................................................................................	24	1	7.00	7	0	1	5	1	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTTT...........................................................................................................................................	25	1	6.00	6	0	1	2	2	0	1	0	0	0	0
.........................................................................................................................................CCCATCAAAC-GGTTGTGAA............................................................................................................................................................................................	19	1	5.00	5	0	3	1	0	0	0	0	0	0	1
.........................................................................................................................................................................................ACAGCCATTTTGATGAGTTT............................................................................................................................................	20	1	4.00	4	0	0	0	1	0	3	0	0	0	0

droWil2

G--TGTTTT-----------------TTTG------------GA--ATC-----------CGT------------------TCCGGCA-A-------------AAG---------AT--G--GAATTTCTTACGTAACTCTTCAAGGGGGTTGTGAAATGTTGCC-ATTTTATTCAACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAGTATT------CCTGCAACAGTATT--------CGA---AATGGA--------------------------------------------------------------TGGTATC----------------CTT	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTT.............................................................................................................................................	23	1	54258.00	54258	247	1282	258	39856	12615
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGT..............................................................................................................................................	22	1	10521.00	10521	179	393	50	3641	6258
.........................................................................................................................................CTCTTCAAGGGGGTTGTGAAATG.........................................................................................................................................................................................	23	1	4092.00	4092	2	4	15	3299	772
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAG...............................................................................................................................................	21	1	1119.00	1119	234	40	2	115	728
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTT............................................................................................................................................	24	1	289.00	289	0	10	7	214	58
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGTT.............................................................................................................................................	22	1	157.00	157	2	111	0	28	16
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTA............................................................................................................................................	24	1	143.00	143	0	30	0	106	7
.....................................................................................................................................................................................TATCACAGCCATTTTGATG.................................................................................................................................................	19	1	109.00	109	53	2	0	1	53
.........................................................................................................................................................................................ACAGCCATTTTGATGAGTT.............................................................................................................................................	19	1	108.00	108	12	0	1	66	29
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTAA...........................................................................................................................................	25	1	105.00	105	0	21	0	84	0
.......................................................................................................................................................................................TCACAGCCATTTTGATGAGTT.............................................................................................................................................	21	1	83.00	83	0	10	0	46	27
.....................................................................................................................................................................................TATCACAGCCATTTTGATGA................................................................................................................................................	20	1	63.00	63	8	6	0	2	47
..........................................................................................................................................TCTTCAAGGGGGTTGTGAAATG.........................................................................................................................................................................................	22	1	55.00	55	0	1	2	43	9
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTC.............................................................................................................................................	23	1	47.00	47	0	0	0	32	15
.........................................................................................................................................................................................ACAGCCATTTTGATGAGT..............................................................................................................................................	18	1	44.00	44	4	0	0	12	28
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGT..............................................................................................................................................	21	1	41.00	41	5	26	0	3	7
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGC..............................................................................................................................................	22	1	38.00	38	5	0	0	4	29
................................................................................................................................................................TTGCC-ATTTTATTCAACTCA....................................................................................................................................................................	20	1	29.00	29	8	2	0	16	3
........................................................................................................................................................................................CACAGCCATTTTGATGAGTT.............................................................................................................................................	20	1	26.00	26	0	3	0	7	16
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGG..............................................................................................................................................	22	1	25.00	25	18	0	0	2	5
.........................................................................................................................................CTCTTCAAGGGGGTTGTGAAAT..........................................................................................................................................................................................	22	1	21.00	21	0	0	0	21	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTA.............................................................................................................................................	23	1	21.00	21	0	2	0	8	11
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGA..............................................................................................................................................	22	1	20.00	20	0	1	0	3	16
........................................................................................................................................................................................CACAGCCATTTTGATGAGT..............................................................................................................................................	19	1	20.00	20	0	1	0	0	19
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTAAA..........................................................................................................................................	26	2	17.00	34	0	5	0	29	0
.......................................................................................................................................................................................TCACAGCCATTTTGATGAGT..............................................................................................................................................	20	1	16.00	16	0	0	0	1	15
..........................................................................................................................................................................................CAGCCATTTTGATGAGTT.............................................................................................................................................	18	1	14.00	14	0	4	0	3	7
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAC...............................................................................................................................................	21	1	13.00	13	12	0	0	0	1
.........................................................................................................................................CTCTTCAAGGGGGTTGTGAAA...........................................................................................................................................................................................	21	1	12.00	12	0	0	0	12	0
..........................................................................................................................................TCTTCAAGGGGGTTGTGAAA...........................................................................................................................................................................................	20	1	11.00	11	0	2	1	5	3
.......................................................................................................................................................................................TCACAGCCATTTTGATGAGTTT............................................................................................................................................	22	1	10.00	10	0	0	0	8	2
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTG............................................................................................................................................	24	1	10.00	10	1	3	0	4	2
..........................................................................................................................................TCTTCAAGGGGGTTGTGA.............................................................................................................................................................................................	18	1	9.00	9	0	0	0	4	5
..........................................................................................................................................TCTTCAAGGGGGTTGTGAAAT..........................................................................................................................................................................................	21	1	8.00	8	0	0	0	5	3
................................................................................................................................................................TTGCC-ATTTTATTCAACTC.....................................................................................................................................................................	19	1	8.00	8	6	0	0	1	1
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTC............................................................................................................................................	24	2	7.50	15	0	0	0	10	5
.........................................................................................................................................CTCTTCAAGGGGGTTGTG..............................................................................................................................................................................................	18	1	7.00	7	1	0	0	2	4
.........................................................................................................................................CTCTTCAAGGGGGTTGTGAA............................................................................................................................................................................................	20	1	6.00	6	0	0	0	6	0
.........................................................................................................................................CTCTTCAAGGGGGTTGTGA.............................................................................................................................................................................................	19	1	6.00	6	0	0	0	4	2
.....................................................................................................................................................................................TATCACAGCCATTTTGATAGT...............................................................................................................................................	21	8	5.88	47	0	0	1	16	30
.........................................................................................................................................CTCTTCAAGGGGGTTGTGAAATT.........................................................................................................................................................................................	23	1	5.00	5	0	0	0	5	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGT................................................................................................................................................	20	1	5.00	5	0	0	0	0	5
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTAA............................................................................................................................................	24	1	5.00	5	0	0	0	5	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGG................................................................................................................................................	20	1	4.00	4	4	0	0	0	0
.........................................................................................................................................CTCTTCAAGGGGGTTGTGAAATA.........................................................................................................................................................................................	23	1	4.00	4	0	0	0	2	2
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGTTA............................................................................................................................................	23	1	3.00	3	0	3	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTAT...........................................................................................................................................	25	1	3.00	3	0	0	0	3	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGTTT............................................................................................................................................	23	1	3.00	3	0	3	0	0	0
.........................................................................................................................................CTCTTCAAGGGGGTTGTGAAATC.........................................................................................................................................................................................	23	1	3.00	3	0	0	0	1	2
.....................................................................................................................................................................................TATCACAGCCATTTTGATGTT...............................................................................................................................................	21	1	3.00	3	0	1	0	0	2
.......................................................................................................................................................................................TCACAGCCATTTTGATGAGTTA............................................................................................................................................	22	1	3.00	3	0	0	0	1	2
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAA...............................................................................................................................................	21	1	2.00	2	0	0	0	0	2
......................................................................................................................................................................................ATCACAGCCATTTTGATGAG...............................................................................................................................................	20	1	2.00	2	0	1	0	0	1
.........................................................................................................................................CTCTTCAAGGGGGTTGTGAATG..........................................................................................................................................................................................	22	1	2.00	2	0	0	0	1	1
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAT...............................................................................................................................................	21	1	2.00	2	0	0	0	1	1
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTAAA...........................................................................................................................................	25	1	2.00	2	0	0	0	2	0
.......................................................................................................................................................................................TCACAGCCATTTTGATGAG...............................................................................................................................................	19	1	2.00	2	0	0	0	0	2
......................................................................................................................................................................................ATCACAGCCATTTTGATGA................................................................................................................................................	19	1	2.00	2	0	2	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGAT..................................................................................................................................................	18	1	2.00	2	0	0	0	0	2
.........................................................................................................................................CTCTTCAAGGGGGTTGTGAAATGT........................................................................................................................................................................................	24	1	2.00	2	0	0	0	2	0

droVir3

G--TGTTTGCATCTTATTA-------C-------------------------------------------------GGTGATAGAT-AACGTCGCTTCGATACGTA--AAGACCAACCCACTC-AATTCTTGCGTAACTCTTCAAGG-GGTTGTGAAATGTTGCC-GTT--A-TCAAGTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TTGCT--T------A---------------------AATT---------CATTGCCCTCGTCGGCA--GAATGGGCTG--GCA--AGGACGAT------------------------------------T	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells	SRR2096013 Ovary_Strain_9_oxidized	SRR2096014 Ovary_Strain_160_oxidized	SRR2096026 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096038 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096050 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096055 Ovary_Min_43	SRR2096056 Ovary_Min_46	SRR2096057 Ovary_Min_50	SRR2096058 Ovary_Min_98	SRR2096059 Ovary_Min_164	SRR2096060 Ovary_Min_193	SRR2096061 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096072 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096079 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096080 embryo_0-2h from 15to16 day old nondysgenic mothers	SRR2096081 embryo_0-2h from 15to16 day old nondysgenic mothers
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTT.............................................................................................................................................	23	1	30205.00	30205	2	24	1051	4345	55	201	17	28	3	34	0	0	0	3	1956	1016	446	1111	1081	558	411	940	1276	65	33	35	57	37	1505	2283	531	1670	7	270	12	61	29	18	27	591	0	1	0	6	6	12	11	15	39	29	42	51	45	42	41	7	5	8	171	1850	5644	350	0	10	18	0	0	3	1	0	0	2	3	1	2	1	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGT..............................................................................................................................................	22	1	19272.00	19272	0	39	944	814	16	39	13	19	4	18	1	0	12	4	1916	1040	680	1517	1363	688	112	1390	1559	14	32	16	53	53	983	1109	385	1214	8	72	11	23	23	16	9	130	0	0	0	0	0	0	1	1	1	2	2	2	2	2	2	0	0	2	11	128	2653	76	0	12	5	5	6	2	0	6	0	0	4	2	6	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTC............................................................................................................................................	24	1	6046.00	6046	0	0	20	136	22	207	9	0	0	0	0	0	0	0	2	0	1	3	1	0	734	1	2	18	9	2	15	12	1192	857	337	1293	2	353	1	1	1	0	28	722	0	0	0	0	0	2	0	0	0	0	0	0	2	2	0	0	0	0	4	15	7	33	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTT............................................................................................................................................	24	1	3040.00	3040	0	1	51	169	2	39	2	0	0	3	0	0	1	0	257	135	59	160	142	98	68	128	194	8	2	1	5	3	216	367	99	422	1	83	2	10	8	1	6	108	0	0	0	0	0	0	0	0	1	1	2	3	1	2	1	0	0	0	1	16	137	16	0	2	2	0	1	1	0	0	0	0	0	0	2	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAG...............................................................................................................................................	21	1	1964.00	1964	2	61	157	18	1	6	0	26	1	12	1	0	0	0	113	62	48	86	66	43	8	89	83	0	3	2	3	1	217	170	96	329	0	8	0	0	2	0	0	15	0	0	0	0	0	0	0	0	1	2	0	4	1	2	2	0	0	1	3	9	195	8	0	0	2	1	1	2	0	0	0	0	0	1	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTA............................................................................................................................................	24	1	840.00	840	0	0	1	10	3	6	1	0	0	1	0	0	0	0	15	7	3	10	3	3	45	8	10	9	5	6	7	8	181	132	58	180	9	20	4	14	7	4	5	39	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	12	5	0	3	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTC.............................................................................................................................................	23	1	347.00	347	0	0	5	243	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	5	0	1	1	0	0	1	0	16	28	4	19	0	2	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	9	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................ACAGCCATTTTGATGAGTT.............................................................................................................................................	19	1	248.00	248	1	0	1	2	1	7	1	0	0	2	0	0	0	0	14	11	2	5	5	6	19	7	9	1	0	0	0	3	8	11	2	11	0	5	0	3	0	0	0	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	22	75	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTAA...........................................................................................................................................	25	1	216.00	216	0	0	1	0	0	0	1	0	0	0	0	0	3	0	0	0	0	0	1	1	5	0	2	3	4	3	4	4	35	24	12	37	5	4	3	23	9	10	6	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	4	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................CTCTTCAAGG-GGTTGTGAAATG.........................................................................................................................................................................................	22	1	204.00	204	0	0	2	34	0	5	0	1	0	0	0	0	0	2	4	0	5	3	2	1	3	1	1	1	0	0	0	0	0	3	0	6	0	0	0	4	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	104	6	2	0	0	0	0	0	2	0	0	0	0	0	0	0	4	3	1	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGC..............................................................................................................................................	22	1	149.00	149	0	5	1	103	0	0	0	0	0	0	0	0	0	0	0	3	1	2	1	0	1	0	3	0	0	0	0	0	2	1	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	23	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTCA...........................................................................................................................................	25	1	139.00	139	0	0	0	0	3	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	11	0	0	1	0	2	3	2	25	19	4	35	0	9	0	1	0	0	5	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................ACAGCCATTTTGATGAGT..............................................................................................................................................	18	1	124.00	124	0	0	0	0	1	0	1	1	0	1	0	0	0	0	3	4	3	7	7	4	2	10	13	0	0	0	0	0	7	2	2	4	0	6	0	0	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	39	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGTT.............................................................................................................................................	22	1	115.00	115	0	0	84	21	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	1	3	0	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGA................................................................................................................................................	20	1	96.00	96	0	4	27	6	0	0	0	0	0	0	0	0	0	0	5	5	1	2	3	3	0	6	2	0	0	0	0	0	2	4	0	10	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	11	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGT..............................................................................................................................................	21	1	96.00	96	0	0	78	7	0	0	0	0	0	0	0	0	0	0	1	1	2	0	0	0	0	2	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATG.................................................................................................................................................	19	1	83.00	83	0	35	15	1	0	0	0	0	0	0	0	0	0	0	3	2	1	2	0	2	0	2	3	0	0	0	0	0	0	2	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTA.............................................................................................................................................	23	1	79.00	79	0	0	0	2	0	0	0	0	0	0	0	0	0	0	1	3	0	1	4	3	6	0	1	0	0	0	2	0	14	13	6	15	0	2	0	1	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTG............................................................................................................................................	24	1	75.00	75	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	5	1	5	3	0	2	1	2	0	0	0	0	0	10	14	2	12	0	2	0	0	1	1	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................ACAGCCATTTTGATGAGTTC............................................................................................................................................	20	1	73.00	73	0	0	1	0	1	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	0	0	1	0	0	0	0	9	3	6	8	0	9	0	0	0	0	3	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTCT...........................................................................................................................................	25	1	61.00	61	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	9	9	5	24	0	0	0	0	0	0	0	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................ACAGCCATTTTGATGAGTTT............................................................................................................................................	20	1	42.00	42	0	0	0	0	0	2	0	0	0	0	0	0	0	0	2	3	1	0	0	3	2	7	1	0	0	0	0	0	1	3	2	1	0	4	0	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTAA............................................................................................................................................	24	1	41.00	41	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	3	4	5	10	1	1	1	3	4	0	2	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTTT...........................................................................................................................................	25	1	37.00	37	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	4	0	2	2	2	0	4	2	0	0	0	0	0	3	8	1	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGA..............................................................................................................................................	22	1	34.00	34	0	0	7	0	0	0	0	0	0	0	0	0	0	0	2	2	0	1	1	2	1	1	2	0	0	0	0	0	0	2	4	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTAAA..........................................................................................................................................	26	2	25.00	50	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	1	0	0	2	1	1	5	1	2	1	2	6	4	0	1	3	11	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTTA...........................................................................................................................................	25	1	23.00	23	0	0	0	0	0	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	3	3	0	3	0	1	0	0	1	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................TCTTCAAGG-GGTTGTGAAATG.........................................................................................................................................................................................	21	1	21.00	21	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	2	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
.......................................................................................................................................................................................TCACAGCCATTTTGATGAGT..............................................................................................................................................	20	1	18.00	18	0	0	3	2	0	0	0	0	0	0	0	0	0	1	0	1	0	2	1	0	0	0	3	0	0	0	0	0	3	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAG...............................................................................................................................................	20	1	17.00	17	0	0	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................TCACAGCCATTTTGATGAGTT.............................................................................................................................................	21	1	15.00	15	0	0	3	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTTC...........................................................................................................................................	25	1	14.00	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	1	2	1	3	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGAT..................................................................................................................................................	18	1	14.00	14	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	1	1	0	1	1	0	0	0	0	0	0	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................CACAGCCATTTTGATGAGTT.............................................................................................................................................	20	1	11.00	11	0	0	1	6	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTG.............................................................................................................................................	23	1	10.00	10	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGG..............................................................................................................................................	22	1	10.00	10	0	3	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTCC............................................................................................................................................	24	1	10.00	10	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	1	1	0	1	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTAT...........................................................................................................................................	25	1	10.00	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	2	0	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTCA............................................................................................................................................	24	1	10.00	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	5	1	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTTCC..........................................................................................................................................	26	1	9.00	9	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	2	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................ACAGCCATTTTGATGAGTTA............................................................................................................................................	20	1	8.00	8	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAC...............................................................................................................................................	21	1	8.00	8	0	4	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGTTT............................................................................................................................................	23	1	8.00	8	0	0	4	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................CAGCCATTTTGATGAGTT.............................................................................................................................................	18	1	7.00	7	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	1	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATC.................................................................................................................................................	19	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGA...................................................................................................................................................	17	3	6.67	20	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	9	6	0	0	2	0	0	0	0	0	0	0	0	0	0	1
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAA...............................................................................................................................................	21	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTTTCC.........................................................................................................................................	27	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................TCACAGCCATTTTGATGAGTTT............................................................................................................................................	22	1	5.00	5	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................CACAGCCATTTTGATGAGT..............................................................................................................................................	19	1	5.00	5	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAT...............................................................................................................................................	21	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTTTT..........................................................................................................................................	26	1	4.00	4	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................ATATCACAGCCATTTTGATGAGTT.............................................................................................................................................	24	1	4.00	4	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGA................................................................................................................................................	19	1	4.00	4	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTCTC..........................................................................................................................................	26	1	4.00	4	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTTAA..........................................................................................................................................	26	2	3.50	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTCAA..........................................................................................................................................	26	2	3.50	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	2	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................CCACTC-AATTCTTGCGTAA................................................................................................................................................................................................................	19	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

G--TGTTTGCATCTCATTA-------TATG------------G-------------------------------------------------------GACACTTAACGATCTCCGCCCATTC-AATTCTTGCGTAACTCTTCAAGG-GGTTGTGAAATGTAGCC-ATT--A-TCAAGTCATATCACAGCCATTTTGATGAGTTTCGTGTGAA--TTGCT--TTCAGCA------------------------TTG--------TCC------------CATCC---------------------G------------TTT-TGTGTCACTGGATTATCCACCTC	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTT.............................................................................................................................................	23	1	190549.00	190549	2936	11554	4145	7518	163827	569
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGT..............................................................................................................................................	22	1	17075.00	17075	1352	934	1070	1721	11853	145
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTC.............................................................................................................................................	23	1	9237.00	9237	7	16	6	1	9207	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTT............................................................................................................................................	24	1	3042.00	3042	59	82	122	264	2490	25
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGTT.............................................................................................................................................	22	1	2246.00	2246	289	5	1	3	1948	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGC..............................................................................................................................................	22	1	1724.00	1724	1	4	2	11	1706	0
.........................................................................................................................................CTCTTCAAGG-GGTTGTGAAATG.........................................................................................................................................................................................	22	1	999.00	999	5	436	6	12	537	3
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAG...............................................................................................................................................	21	1	795.00	795	160	28	90	120	381	16
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTC............................................................................................................................................	24	1	423.00	423	13	14	5	4	381	6
.......................................................................................................................................................................................TCACAGCCATTTTGATGAGTT.............................................................................................................................................	21	1	362.00	362	5	9	1	2	345	0
.........................................................................................................................................................................................ACAGCCATTTTGATGAGTT.............................................................................................................................................	19	1	351.00	351	2	92	47	95	115	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGT..............................................................................................................................................	21	1	243.00	243	134	1	1	1	106	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTA............................................................................................................................................	24	1	223.00	223	6	10	12	13	181	1
........................................................................................................................................................................................CACAGCCATTTTGATGAGTT.............................................................................................................................................	20	1	217.00	217	5	2	1	2	207	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTG.............................................................................................................................................	23	1	111.00	111	1	0	0	2	108	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGTC.............................................................................................................................................	22	1	107.00	107	0	0	0	0	107	0
..........................................................................................................................................................................................CAGCCATTTTGATGAGTT.............................................................................................................................................	18	1	101.00	101	2	1	1	1	96	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGCC.............................................................................................................................................	23	1	90.00	90	0	0	0	1	89	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGA................................................................................................................................................	20	1	75.00	75	24	4	7	10	30	0
.........................................................................................................................................................................................ACAGCCATTTTGATGAGT..............................................................................................................................................	18	1	65.00	65	2	20	17	24	2	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTG............................................................................................................................................	24	1	49.00	49	3	2	3	2	39	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGTTT............................................................................................................................................	23	1	46.00	46	2	0	0	0	43	1
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTA.............................................................................................................................................	23	1	37.00	37	2	0	4	3	28	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGA..............................................................................................................................................	22	1	35.00	35	5	1	1	5	23	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGAC.............................................................................................................................................	23	1	28.00	28	0	0	0	0	28	0
....................................................................................................................................................................................ATATCACAGCCATTTTGATGAGTT.............................................................................................................................................	24	1	26.00	26	1	0	0	0	25	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATG.................................................................................................................................................	19	1	24.00	24	14	0	5	5	0	0
........................................................................................................................................................................................CACAGCCATTTTGATGAGTC.............................................................................................................................................	20	1	24.00	24	0	0	0	0	24	0
.......................................................................................................................................................................................TCACAGCCATTTTGATGAGT..............................................................................................................................................	20	1	24.00	24	4	0	0	3	17	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGC..............................................................................................................................................	21	1	22.00	22	0	0	0	0	22	0
.......................................................................................................................................................................................TCACAGCCATTTTGATGAGTC.............................................................................................................................................	21	1	22.00	22	0	0	0	0	22	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTTT...........................................................................................................................................	25	1	20.00	20	1	1	3	2	13	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGG..............................................................................................................................................	22	1	18.00	18	0	5	2	3	8	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAG...............................................................................................................................................	20	1	17.00	17	14	0	0	0	3	0
.........................................................................................................................................CTCTTCAAGG-GGTTGTGAAAT..........................................................................................................................................................................................	21	1	15.00	15	0	1	0	0	14	0
.........................................................................................................................................CTCTTCAAGG-GGTTGTGAAA...........................................................................................................................................................................................	20	1	15.00	15	0	0	0	1	14	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAC...............................................................................................................................................	21	1	13.00	13	0	0	0	0	13	0
........................................................................................................................................................................................CACAGCCATTTTGATGAGT..............................................................................................................................................	19	1	12.00	12	2	2	0	0	8	0
.........................................................................................................................................................................................ACAGCCATTTTGATGAGTC.............................................................................................................................................	19	1	11.00	11	0	0	0	0	11	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTAA...........................................................................................................................................	25	1	9.00	9	3	0	1	1	3	1
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGTTA............................................................................................................................................	23	1	9.00	9	2	0	0	0	7	0
.......................................................................................................................................................................................TCACAGCCATTTTGATGAGTTT............................................................................................................................................	22	1	7.00	7	0	0	0	0	7	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGATC..............................................................................................................................................	22	1	7.00	7	0	0	0	0	7	0

droGri2

G--TGTTTGTATCTCATTA-------T-------------TTTA--TTCTTGCATACATCTGC-----AGACTGTGAGCGAACCAAGC-----------------------------CCACCC-AATTCTTGCGTAACTCTTCAAGG-GGTTGTGAAATGTGGG-TATT--A-TCAAGTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TTGCT--TTC----A-----------------------T-CACAGTGATCAT------------TGTCCCTC-----GCCGGGG----CCG------------GTT-CGTG------------------C	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTT.............................................................................................................................................	23	1	455.00	455	293	162
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGT..............................................................................................................................................	22	1	180.00	180	144	36
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGTT.............................................................................................................................................	22	1	28.00	28	28	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAG...............................................................................................................................................	21	1	21.00	21	20	1
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTT............................................................................................................................................	24	1	19.00	19	11	8
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGT..............................................................................................................................................	21	1	17.00	17	17	0
.........................................................................................................................................CTCTTCAAGG-GGTTGTGAAATG.........................................................................................................................................................................................	22	1	4.00	4	2	2
.....................................................................................................................................................................................TATCACAGCCATTTTGATGA................................................................................................................................................	20	1	3.00	3	2	1
.......................................................................................................................................................................................TCACAGCCATTTTGATGAGTT.............................................................................................................................................	21	1	2.00	2	2	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATG.................................................................................................................................................	19	1	2.00	2	2	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTA............................................................................................................................................	24	1	2.00	2	2	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTC............................................................................................................................................	24	1	2.00	2	2	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGTTT............................................................................................................................................	23	1	1.00	1	1	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTG............................................................................................................................................	24	1	1.00	1	1	0
....................................................................................................................................................................................ATATCACAGCCATTTTGATGAGTT.............................................................................................................................................	24	1	1.00	1	1	0
.......................................................................................................................................................................................TCACAGCCATTTTGATGAGT..............................................................................................................................................	20	1	1.00	1	1	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGC..............................................................................................................................................	22	1	1.00	1	0	1
....................................................................................................................................................................................ATATCACAGCCATTTTGATGAG...............................................................................................................................................	22	1	1.00	1	1	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTA.............................................................................................................................................	23	2	0.50	1	0	1
.....................................................................................................................................................................................TATCACAGCCATTTTGAGT.................................................................................................................................................	19	6	0.17	1	0	1

droAna3

G--TGTGCTA-----------------CAA------------GA--ATC-----------CCC----TCAAA---------------------------------A--AAGGACGATCCATCG-AGTTCTTACGTAACTCCTCAAAG-GGCTGTGAAATGTTGCC-ATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGGGAA--TCG--TCA------GA--------------------A-AAC--------CGT------------CA--GAAAGGGGCGCGGCGGCAGG---ATGT----------------------------------C	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTT.............................................................................................................................................	23	1	22015.00	22015	284	6675	478	4415	375	9788
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGT..............................................................................................................................................	22	1	7585.00	7585	160	558	93	1251	104	5419
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAG...............................................................................................................................................	21	1	713.00	713	20	15	2	74	9	593
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTT............................................................................................................................................	24	1	490.00	490	7	90	7	161	30	195
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTC.............................................................................................................................................	23	1	461.00	461	0	451	0	6	1	3
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGC..............................................................................................................................................	22	1	134.00	134	0	114	0	9	0	11
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGTT.............................................................................................................................................	22	1	98.00	98	33	57	0	0	1	7
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTA............................................................................................................................................	24	1	62.00	62	2	25	2	13	4	16
.........................................................................................................................................................................................ACAGCCATTTTGATGAGTT.............................................................................................................................................	19	1	57.00	57	0	8	2	40	0	7
.....................................................................................................................................................................................TATCACAGCCATTTTGATGA................................................................................................................................................	20	1	52.00	52	5	15	0	4	1	27
.........................................................................................................................................CTCCTCAAAG-GGCTGTGAAATG.........................................................................................................................................................................................	22	1	50.00	50	8	10	3	21	1	7
.....................................................................................................................................................................................TATCACAGCCATTTTGATG.................................................................................................................................................	19	1	43.00	43	2	5	0	4	0	32
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTG............................................................................................................................................	24	1	28.00	28	0	0	0	7	0	21
.......................................................................................................................................................................................TCACAGCCATTTTGATGAGTT.............................................................................................................................................	21	1	28.00	28	2	15	1	2	1	7
.........................................................................................................................................................................................ACAGCCATTTTGATGAGT..............................................................................................................................................	18	1	23.00	23	0	0	1	15	1	6
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGT..............................................................................................................................................	21	1	21.00	21	10	7	0	0	0	4
........................................................................................................................................................................................CACAGCCATTTTGATGAGTT.............................................................................................................................................	20	1	19.00	19	0	12	0	1	0	6
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTG.............................................................................................................................................	23	1	18.00	18	0	7	1	3	0	7
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAT...............................................................................................................................................	21	1	17.00	17	0	0	0	0	0	17
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTA.............................................................................................................................................	23	1	15.00	15	1	1	1	3	0	9
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTAA...........................................................................................................................................	25	1	13.00	13	1	9	0	0	0	3
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTC............................................................................................................................................	24	1	11.00	11	1	2	0	3	0	5
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGA..............................................................................................................................................	22	1	10.00	10	0	0	1	1	0	8
.......................................................................................................................................................................................TCACAGCCATTTTGATGAGT..............................................................................................................................................	20	1	9.00	9	0	2	0	0	0	7
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGG..............................................................................................................................................	22	1	7.00	7	0	0	0	2	0	5
..........................................................................................................................................TCCTCAAAG-GGCTGTGAAATG.........................................................................................................................................................................................	21	1	6.00	6	3	0	0	3	0	0
.........................................................................................................................................CTCCTCAAAG-GGCTGTGA.............................................................................................................................................................................................	18	1	6.00	6	1	0	0	4	0	1
.........................................................................................................................................CTCCTCAAAG-GGCTGTGAA............................................................................................................................................................................................	19	1	6.00	6	0	0	1	4	1	0
........................................................................................................................................................................................CACAGCCATTTTGATGAGT..............................................................................................................................................	19	1	6.00	6	0	1	0	1	0	4
.....................................................................................................................................................................................TATCACAGCCATTTTGATGT................................................................................................................................................	20	1	6.00	6	0	0	0	1	0	5
.........................................................................................................................................CTCCTCAAAG-GGCTGTGAAAT..........................................................................................................................................................................................	21	1	5.00	5	1	3	1	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAA...............................................................................................................................................	21	1	5.00	5	1	0	0	0	0	4
.....................................................................................................................................................................................TATCACAGCCATTTTGAT..................................................................................................................................................	18	1	4.00	4	1	1	0	0	0	2
..........................................................................................................................................................................................CAGCCATTTTGATGAGTT.............................................................................................................................................	18	1	4.00	4	0	4	0	0	0	0
.........................................................................................................................................CTCCTCAAAG-GGCTGTGAAA...........................................................................................................................................................................................	20	1	4.00	4	0	1	0	2	0	1
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGTTT............................................................................................................................................	23	1	4.00	4	1	1	0	0	0	2
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTTT...........................................................................................................................................	25	1	4.00	4	0	0	0	2	1	1
.....................................................................................................................................................................................TATCACAGCCATTTTGAGT.................................................................................................................................................	19	4	3.00	12	0	0	0	0	0	12
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTAAA..........................................................................................................................................	26	1	3.00	3	0	3	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGCC.............................................................................................................................................	23	1	3.00	3	0	3	0	0	0	0
....................................................................................................................................................................................ATATCACAGCCATTTTGATGAGTT.............................................................................................................................................	24	1	3.00	3	0	3	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTTG...........................................................................................................................................	25	3	3.00	9	0	0	0	2	0	7
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGAC.............................................................................................................................................	23	1	3.00	3	0	3	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAC...............................................................................................................................................	21	1	3.00	3	0	2	0	0	0	1
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGCA.............................................................................................................................................	23	1	3.00	3	0	1	0	0	0	2
.....................................................................................................................................................................................TATCACAGCCATTTTGATGATC..............................................................................................................................................	22	1	2.00	2	0	0	0	2	0	0
.......................................................................................................................................................................................TCACAGCCATTTTGATGAGTC.............................................................................................................................................	21	1	2.00	2	0	2	0	0	0	0

droBip1

G--TGTTCTC---------GAAG-------------------------C------------------------CCCCCTAACCCGA---------------------------AGATCCATCC-AGTTCTTACGTAACTCTTCAAGG-GGCTGTGAAATGTTGC--ATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TTCC--AA------A---------------------AAATCG-------CAT------------CGTGGGGC-----GCGGCAG----GCGATTTCGTA-----------------------------AC	Size	Hit Count	Total Norm	Total
No Reads

droKik1

G--AGTCTGC---------G----------------------GA----------------TAAGCCAACAAGTGTTTGTGATCCAAGA-T-----------------------------GTCT-GATTCTTACGTAACTCTTCAAAG-GGCTGTGAAATGTTACC-GTT--A-TCTATCCATATCACAGCCATTTTGATGAGTTCCGTGTGAA--TT------TCGGCAGCCAG-----------------AAGG---------------------------------------------------AG----------------------------------TAC	Size	Hit Count	Total Norm	Total
No Reads

droFic1

G--TGT---------------------------------------------------------------------TCGTGATCCCATA-T-----------------------------A--T-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTGTCTGTT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TT------TCGGCAGCTGGGCA----------A---ATATCA---------------------------------------------A---TTTCCATAACCGATTGTATC------------------C	Size	Hit Count	Total Norm	Total
No Reads

droEle1

G--TGT---------------------------------------------------------------------TCGTGATCCGACA-T-----------------------------A--T-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTCCC-ACT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TT------TCAGCAACTGGATA---------GACATAAATCA---------------------------------------------G---TTTTTA--------------------------------T	Size	Hit Count	Total Norm	Total
No Reads

droRho1

G--TGT---------------------------------------------------------------------TCGTGATATAT-A-TGTCG----GAT------------------A--T-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTGCCTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TT------TCGGCAGCTGGGCT----------A---AAATCA---------------------------------------------A---GTTTCA--------------------------------T	Size	Hit Count	Total Norm	Total
No Reads

droBia1

G--TGT---------------------------------------------------------------------TCGTGATCCAACA-T-----------------------------A--T-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTGCCCACT--G-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TT------TCGGCAGCCGGTCA----------A---AAATCG---------------------------------------------C---ATTTCGCA-------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droTak1

G--TGT---------------------------------------------------------------------TCGTGATCCAACA-T-----------------------------A--T-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTGTCTATT--A-TCCACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TT------TCGGCAGCTGGGCA----------C-TAAAATCA---------------------------------------------------------------------------------------T	Size	Hit Count	Total Norm	Total
No Reads

droEug1

G--TGT---------------------------------------------------------------------TCGTGATCCGATA-T-----------------------------A--T-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTGCCTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAG--TT------TCGGCATCTGGTCA----------A---AG-TTA------TTA------------------------------------T---ATTTCATAACCGATT-TATT------------------C	Size	Hit Count	Total Norm	Total
No Reads

dm3

GCCAGTTCGC---------GAATTGG----GCATAACGATTGGA--TGC-----------TAAACCAACAAGTGTTTGTGATCCAAGC-C-----------------------------A--T-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTCGACTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TC------GCGGCAGCGGATCA----------A---AAAACA---------------------------------------------------------------------------------------T	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTT.............................................................................................................................................	23	1	165783.00	165783	0	0	0	0	99	4	4	20	118	109	16	64	18	2	40	1	0	10	6	0	3	6	11	6	0	5	45	19	176	197	4824	5746	58	63	11	25	56	33	8	19	7	40	106	19	22	33	30	62	99	72	70	42	18	1	9	0	42	27	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	56	67	28	39	221	697	142	2587	1649	46	18	32	35	82	227	446	34	397	551	26	159	146	205	542	879	3717	9	22	67	136	290	42	44	8	407	611	456	10	207	67	771	1019	10	881	4	740	482	2594	38	1470	165	2392	1234	0	0	0	0	1	0	0	0	2	0	733	293	864	647	88	23	44	47	43	32	61	23	28	27	16	0	0	0	0	0	50	31	22	17	15	49	3945	4396	0	3303	49	21	1687	6362	211	5094	189	2513	77	3501	426	0	8	24	21	0	4839	19	35	16	34	0	0	0	16	4	19	36	0	0	0	0	0	46	24	0	0	0	0	0	2	70	40	21	384	78	69	16	79	37	146	157	76	39	29	228	74	0	0	97	0	0	0	0	3089	3788	2	354	1672	99	53	23	49	2723	2980	38	504	66	83	20	23	25	2440	100	26	45	87	40	90	60	47	398	57	123	139	60	43	23	913	1105	394	660	814	882	1441	791	103	39	132	97	128	4839	6867	6325	8530	5395	13885	1089	541	105	67	324	366	117	131	719	110	827	719	14	287	96	147	169	253	54	217	77	41	60	76	313	44	54	3	65	2803	132	85	227	101	65	167	57	514	304	83	7
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGT..............................................................................................................................................	22	1	49902.00	49902	0	0	0	0	89	3	0	1	12	21	3	13	5	0	109	3	0	13	5	0	1	3	7	13	0	3	34	5	45	50	1920	1938	17	11	14	20	8	12	7	7	3	25	22	5	6	6	6	23	31	27	20	16	5	0	38	0	15	9	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	22	16	15	16	355	32	6	130	153	6	7	20	12	14	47	431	8	81	507	27	179	48	62	152	235	4431	16	7	14	53	109	23	29	17	74	56	87	1	57	12	217	303	2	417	4	293	124	590	8	354	20	652	302	0	0	0	2	1	0	0	0	2	0	24	19	32	20	12	1	13	12	10	6	18	9	10	6	8	0	0	0	0	0	23	9	2	25	12	4	932	1056	0	859	13	8	568	2332	54	2144	49	965	14	1222	67	1	10	3	37	0	1907	8	11	6	6	0	0	0	7	1	10	12	0	0	0	0	0	14	13	0	0	1	1	0	4	27	14	9	62	28	25	8	11	12	21	25	18	10	3	51	14	0	0	13	1	1	0	0	177	237	0	203	1111	56	16	13	19	1447	2974	16	431	29	48	15	16	16	706	20	8	19	25	7	27	15	20	90	13	38	54	19	15	8	260	300	105	157	215	278	310	180	43	25	22	11	44	1187	1272	1598	2111	91	357	150	66	13	30	79	87	25	32	234	23	227	190	12	149	122	27	48	261	32	107	44	5	24	35	199	20	55	2	31	1654	68	41	66	41	38	46	89	226	268	85	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAG...............................................................................................................................................	21	1	7096.00	7096	0	0	0	0	38	2	0	0	0	1	0	1	0	0	15	0	0	2	1	0	0	0	0	9	0	0	0	0	2	12	289	299	1	0	54	0	0	1	0	1	0	0	1	0	0	1	0	0	2	2	1	2	1	0	5	0	5	9	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	7	4	2	118	4	0	0	2	1	0	1	2	1	3	67	1	7	201	2	24	3	5	17	27	1068	2	0	0	9	18	4	3	1	2	3	3	0	10	7	38	90	1	88	0	36	19	79	2	38	6	84	44	0	0	0	0	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	127	165	0	66	2	0	78	349	12	314	2	140	1	162	12	0	6	1	1	0	256	1	0	1	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	2	1	3	4	0	3	0	9	1	0	0	0	0	0	0	0	7	8	0	12	63	7	1	3	0	113	773	3	49	2	5	4	0	0	113	0	1	0	1	1	2	0	0	4	0	2	3	3	1	0	8	6	2	9	9	11	8	11	0	1	4	2	2	100	100	205	391	3	6	0	1	0	3	2	2	0	1	14	1	16	7	2	8	2	1	0	7	1	1	1	0	0	1	4	0	1	0	6	251	4	2	1	7	3	7	4	11	7	4	0
.........................................................................................................................................CTCCTCAAAG-GGTTGTGAAATG.........................................................................................................................................................................................	22	1	4149.00	4149	0	0	0	0	0	0	1	4	4	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	36	67	105	16	22	3	0	5	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	76	18	67	50	15	0	2	2	0	7	2	0	3	4	0	0	2	0	3	14	13	0	0	0	0	1	7	2	0	4	17	7	2	0	0	13	7	0	3	0	3	4	9	1	5	2	11	4	0	0	0	0	0	0	0	0	0	0	5	11	38	78	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	76	18	0	30	56	42	8	28	113	17	72	61	192	42	134	0	0	0	0	0	19	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	14	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	144	122	0	3	3	1	0	0	0	3	13	0	4	1	2	0	0	0	8	0	0	2	0	1	2	0	0	2	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	5	2	70	102	94	92	1097	424	12	8	5	2	0	0	0	0	13	2	10	21	0	0	0	2	0	2	3	0	0	12	0	1	1	0	0	0	4	106	2	2	6	1	5	11	0	6	3	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTT............................................................................................................................................	24	1	2296.00	2296	0	0	0	0	2	1	0	0	1	0	0	1	0	0	0	0	0	0	1	0	1	0	0	0	0	0	4	0	3	0	0	0	0	0	0	0	1	1	0	0	0	1	2	0	1	0	0	0	2	1	1	0	0	0	0	0	11	8	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	4	4	6	3	19	18	0	0	1	0	0	1	5	0	5	6	0	4	0	1	10	0	14	1	0	0	3	4	3	2	0	2	3	3	1	0	0	12	2	0	4	0	4	2	9	0	25	1	47	38	0	0	0	0	0	0	0	0	0	0	10	4	18	1	0	0	2	1	1	5	0	1	0	2	0	0	0	0	0	0	2	1	0	9	0	0	61	72	0	52	0	0	34	146	5	112	3	78	0	96	3	0	0	8	7	0	97	1	0	1	3	0	0	0	3	0	6	1	0	0	0	0	0	2	0	0	0	0	0	0	0	13	2	2	7	3	2	1	0	1	3	2	0	2	0	3	2	0	0	1	1	0	0	0	37	46	1	2	8	2	1	0	0	13	18	0	4	2	5	1	1	1	5	1	1	1	3	0	1	2	1	13	0	1	3	2	0	1	22	29	14	23	15	22	18	18	2	2	4	1	10	62	59	75	76	35	146	20	13	5	0	3	5	2	4	15	9	15	9	0	14	4	5	5	6	4	11	2	3	2	8	17	5	0	1	4	52	1	2	2	0	0	6	1	9	13	2	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGA................................................................................................................................................	20	1	2048.00	2048	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	4	0	0	0	0	0	1	0	0	0	2	11	10	78	86	4	3	28	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	6	0	0	0	0	0	0	0	0	0	1	14	0	0	7	0	0	6	7	2	0	64	0	0	0	0	0	0	0	0	1	0	0	0	1	3	37	65	0	46	0	18	16	33	7	38	21	78	39	0	0	1	4	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	114	162	0	66	2	2	32	97	10	91	12	168	1	160	29	0	0	0	1	0	118	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0	0	0	3	0	0	1	0	0	42	0	2	0	0	0	0	0	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	5	0	0	0	8	1	3	0	0	0	0	0	9	9	7	47	0	1	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	66	0	0	0	0	0	0	1	1	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTA............................................................................................................................................	24	1	1450.00	1450	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	2	0	0	0	2	0	0	0	0	0	0	0	0	0	1	1	1	1	1	0	3	0	0	5	2	6	5	3	3	4	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	3	1	0	6	1	0	0	0	0	0	7	1	2	5	0	1	0	1	0	5	4	1	1	2	1	1	1	0	0	0	1	3	0	1	1	6	4	0	2	0	2	2	9	1	17	4	21	14	0	0	0	0	0	0	0	0	0	0	2	10	7	1	1	2	3	6	2	0	0	0	1	5	0	0	0	0	0	0	0	0	1	1	1	1	70	64	0	44	0	0	17	43	1	48	0	36	0	69	3	0	0	0	0	0	39	1	6	1	8	0	0	0	1	0	4	8	0	0	0	0	0	9	5	0	0	0	0	0	0	2	1	1	6	1	2	0	2	1	2	3	2	1	0	19	0	0	0	0	3	2	0	0	3	5	0	1	4	0	0	0	0	5	5	0	0	0	4	0	1	1	4	0	0	1	0	0	1	0	1	1	0	0	2	0	0	2	56	70	30	57	50	71	67	39	4	1	1	2	1	11	12	15	18	10	17	4	2	0	2	15	22	10	10	0	2	4	1	0	2	9	9	14	0	1	0	1	0	0	0	3	0	0	0	0	5	1	0	1	3	1	0	0	0	4	0	0
.........................................................................................................................................................................................ACAGCCATTTTGATGAGTT.............................................................................................................................................	19	1	1363.00	1363	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	0	0	2	42	41	1	1	0	2	2	2	0	0	0	1	0	0	0	0	0	4	2	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	5	0	6	0	4	3	29	1	2	0	0	1	0	0	0	0	0	0	0	0	0	0	11	16	39	15	2	0	3	3	2	3	2	0	1	0	1	0	0	0	0	0	2	0	6	1	0	0	38	48	0	22	0	0	4	54	2	46	0	9	0	11	0	0	0	0	0	0	16	2	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	7	2	1	1	3	0	3	2	1	1	0	4	0	0	0	0	0	0	0	0	59	98	0	3	17	0	0	0	1	16	16	0	5	1	2	0	0	0	30	0	2	0	2	1	0	3	1	6	0	0	1	0	1	0	36	30	34	12	49	10	36	14	7	0	0	0	6	32	45	41	56	15	73	1	1	1	0	2	1	5	1	0	0	1	3	0	3	0	1	0	1	0	1	1	0	0	0	0	0	0	0	0	14	1	0	1	0	0	1	0	1	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGA..............................................................................................................................................	22	1	656.00	656	0	0	0	0	4	0	1	2	3	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	32	0	0	0	0	0	0	0	2	0	0	15	0	0	1	0	1	0	0	0	0	1	0	0	0	1	0	0	2	0	1	0	0	0	0	1	8	6	0	4	0	3	6	18	0	3	1	9	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	12	21	0	10	0	0	4	29	2	19	1	31	0	31	2	0	0	0	0	0	31	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0	3	24	1	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	1	2	0	1	0	19	37	1	14	30	62	18	56	0	0	0	0	1	3	5	9	4	0	1	0	0	0	2	7	3	3	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	1	1	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGAT..................................................................................................................................................	18	1	535.00	535	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	22	12	4	2	5	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	4	0	0	0	0	0	0	0	0	0	1	0	0	5	0	0	2	1	0	0	0	0	0	0	2	30	2	1	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	4	6	0	5	2	12	4	24	7	9	4	312	0	0	0	0	0	22	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	2	5	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
.....................................................................................................................................................................................TATCACAGCCATTTTGATG.................................................................................................................................................	19	1	479.00	479	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	6	0	0	0	0	0	0	0	0	0	1	9	7	13	17	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0	2	4	0	0	9	0	1	0	1	0	2	8	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	1	0	1	0	0	0	2	0	6	1	2	2	0	0	3	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	20	0	2	1	1	1	18	7	15	10	4	1	7	21	0	1	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	5	0	0	0	0	3	80	1	1	1	0	0	0	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	7	5	7	31	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	81	1	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTAA...........................................................................................................................................	25	1	450.00	450	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	1	1	0	0	0	3	0	3	0	0	0	2	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0	4	0	0	0	0	0	1	0	0	4	0	0	0	0	0	0	12	0	0	0	1	0	0	0	0	2	1	0	0	2	0	2	0	0	0	0	0	0	0	0	1	0	2	2	0	0	0	0	0	0	0	0	0	0	0	1	5	1	2	0	3	3	1	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	12	0	6	0	0	2	4	0	7	1	6	0	7	0	0	0	0	0	0	3	1	3	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	9	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	3	2	0	13	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	1	1	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	26	38	10	27	28	26	25	8	1	0	1	0	0	0	2	2	5	11	2	2	0	0	4	5	6	4	4	0	1	0	0	0	0	5	2	15	1	0	0	0	0	0	0	0	0	0	0	0	0	0	4	1	1	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTC.............................................................................................................................................	23	1	431.00	431	0	0	0	0	0	0	0	0	0	4	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	2	5	0	0	0	3	0	0	0	0	0	1	0	0	0	0	1	1	18	0	0	0	0	0	0	0	0	1	0	0	0	1	0	2	0	0	2	0	2	1	4	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	17	7	0	7	0	0	7	7	1	7	0	6	0	13	2	0	0	0	0	0	28	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	3	4	0	2	3	0	0	0	0	2	5	0	2	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	3	22	0	10	3	21	4	18	0	1	2	0	1	9	15	14	35	6	59	1	1	0	0	5	1	1	1	0	0	1	1	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	0	1	0	1	1	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGC..............................................................................................................................................	22	1	345.00	345	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	3	0	0	0	0	0	0	0	4	0	0	2	0	0	0	0	0	0	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	4	0	1	0	2	1	7	0	3	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	12	0	10	0	0	3	8	0	3	0	6	0	3	0	0	0	0	0	0	30	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	1	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	1	1	0	1	8	4	0	0	1	3	8	0	1	1	1	0	0	1	2	1	1	0	0	1	0	1	0	2	0	5	4	1	0	0	5	11	1	10	3	7	6	8	2	1	3	0	9	10	10	13	13	0	3	1	0	0	2	3	4	3	0	4	1	1	1	0	1	1	0	0	1	0	1	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	2	0	1	4	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTG.............................................................................................................................................	23	1	337.00	337	0	0	0	0	2	0	0	0	1	1	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	1	0	0	0	0	0	1	0	1	0	1	0	0	1	0	0	0	0	1	0	0	2	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	1	0	0	0	0	0	3	6	0	5	0	0	0	13	0	4	0	45	0	45	4	0	0	0	0	0	10	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	1	3	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	13	6	8	3	16	14	14	5	2	0	2	1	4	13	18	19	3	1	1	0	0	0	2	2	3	2	0	1	3	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGG..............................................................................................................................................	22	1	302.00	302	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	1	0	0	1	0	0	0	1	5	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	4	5	0	4	0	0	0	9	0	3	0	35	1	33	1	0	0	0	0	0	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	4	6	0	4	0	1	1	0	1	1	0	0	1	1	0	1	0	0	0	0	0	1	0	0	0	10	4	4	3	27	5	9	2	0	1	0	1	1	8	17	26	4	1	1	0	0	0	2	0	1	0	2	1	1	3	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0
.........................................................................................................................................................................................ACAGCCATTTTGATGAGT..............................................................................................................................................	18	1	301.00	301	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	1	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	3	0	0	2	8	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	1	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	9	13	0	9	0	0	0	20	0	13	0	0	0	3	0	0	0	0	0	0	4	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	1	15	1	0	0	1	15	28	3	5	1	0	0	1	0	8	0	0	0	1	0	1	0	0	5	1	3	2	0	1	0	6	2	9	2	10	0	9	2	3	1	0	0	0	8	9	5	19	0	4	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	1
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTA.............................................................................................................................................	23	1	231.00	231	0	0	0	0	4	0	0	2	4	3	0	3	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	1	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	1	0	0	0	0	0	3	1	0	3	0	3	2	3	0	1	0	4	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	16	0	3	0	0	7	11	1	7	1	9	0	13	0	0	0	0	0	0	17	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	1	0	0	0	1	0	0	0	0	4	8	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	2	4	2	0	0	1	0	0	7	10	10	5	1	0	0	1	0	1	3	0	0	0	2	0	0	0	0	0	3	1	2	1	0	0	1	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	3	0	0	0
..........................................................................................................................................TCCTCAAAG-GGTTGTGAAATG.........................................................................................................................................................................................	21	1	217.00	217	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	1	4	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	2	0	0	0	0	0	0	2	0	2	2	0	1	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	1	0	1	0	1	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	4	3	3	1	0	1	4	0	5	7	8	15	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	3	0	0	1	0	0	0	0	3	0	0	0	0	0	0	0	0	4	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	8	13	7	18	13	3	0	3	0	0	0	0	0	0	3	0	3	8	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	17	0	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................TCACAGCCATTTTGATGAGTT.............................................................................................................................................	21	1	192.00	192	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	21	12	1	0	0	0	0	1	1	0	2	2	0	0	2	2	2	7	45	0	0	0	0	2	0	0	0	4	3	5	0	1	0	0	0	0	2	0	1	0	6	1	3	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	2	0	2	0	0	2	3	0	4	1	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	6	0	0	1	0	0	0	0	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	3	1	0	0	0	0	0	0	0	0	0	0	1	1	1	5	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTAAA..........................................................................................................................................	26	1	192.00	192	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	3	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	5	0	0	0	0	2	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	3	0	0	0	0	0	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	1	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	18	23	9	15	22	28	9	1	0	0	0	0	0	0	0	0	1	2	0	0	0	0	1	4	2	0	1	0	0	0	0	0	0	2	1	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
.........................................................................................................................................CTCCTCAAAG-GGTTGTGAAAT..........................................................................................................................................................................................	21	1	163.00	163	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	4	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	2	0	1	5	5	5	3	2	0	0	0	0	0	1	0	1	7	0	0	0	0	2	2	5	0	0	0	0	0	0	0	0	1	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	16	0	2	2	0	4	4	1	3	0	7	2	6	5	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	1	3	17	5	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGTT.............................................................................................................................................	22	1	142.00	142	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	1	0	0	3	6	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	8	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	1	0	0	1	0	0	5	0	4	0	0	0	2	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	1	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	27	2	9	0	7	1	9	0	0	0	0	0	1	2	2	3	2	3	0	0	0	0	2	1	0	1	1	1	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTC............................................................................................................................................	24	1	138.00	138	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	5	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	5	0	1	0	4	3	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	1	0	0	1	6	0	3	0	2	0	2	0	0	0	0	1	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	4	2	0	0	1	3	0	0	1	0	0	0	0	3	7	1	0	0	0	0	0	0	4	0	0	0	0	0	0	2	0	1	0	0	0	0	1	0	0	2	0	3	0	1	0	1	0	0	1	0	0	3	4	3	15	5	1	1	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTATC..........................................................................................................................................	26	1	98.00	98	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	66	32	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGA...................................................................................................................................................	17	4	93.75	375	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	10	2	7	4	0	0	45	38	0	0	0	0	71	16	17	153	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAA...............................................................................................................................................	21	1	79.00	79	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	7	0	4	0	0	2	8	0	1	0	5	0	5	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	2	0	3	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................CACAGCCATTTTGATGAGTT.............................................................................................................................................	20	1	77.00	77	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	7	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	6	2	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	4	0	1	0	0	0	9	0	4	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	3	0	2	0	2	0	1	0	1	0	0	0	0	3	0	6	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................CAGCCATTTTGATGAGTT.............................................................................................................................................	18	1	75.00	75	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	4	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	5	0	4	0	0	1	2	0	4	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	5	1	2	0	2	0	1	0	0	1	0	0	1	0	1	4	4	7	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

G--TAT----------------------------AACGATTGGATATGC-----------TAAACCAACAAGTGTTCGTGATCCAAGC-C-----------------------------A--T-AGTTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTCGACTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TC------TCGGCAGCGGATCG----------A---AAAACA---------------------------------------------T---ATTT----------------------------------C	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTT.............................................................................................................................................	23	1	6948.00	6948	160	2	104	601	128	329	141	186	211	193	38	4854	0	0	0	0	1
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGT..............................................................................................................................................	22	1	1889.00	1889	199	6	25	143	39	734	13	13	14	13	17	673	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAG...............................................................................................................................................	21	1	1309.00	1309	291	4	9	21	62	872	0	0	0	1	6	43	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGAT..................................................................................................................................................	18	1	646.00	646	1	0	0	0	69	575	0	0	0	0	0	0	0	0	0	0	1
.....................................................................................................................................................................................TATCACAGCCATTTTGATG.................................................................................................................................................	19	1	288.00	288	107	3	0	0	13	164	0	0	0	0	0	1	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGA................................................................................................................................................	20	1	240.00	240	26	0	0	3	28	180	0	0	1	1	1	0	0	0	0	0	0
.........................................................................................................................................CTCCTCAAAG-GGTTGTGAAATG.........................................................................................................................................................................................	22	1	169.00	169	10	0	15	6	2	38	0	0	0	1	0	97	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTA............................................................................................................................................	24	1	76.00	76	0	0	0	1	0	0	6	10	29	22	4	4	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTAA...........................................................................................................................................	25	1	58.00	58	0	0	1	1	0	0	0	7	29	16	2	2	0	0	0	0	0
.........................................................................................................................................................................................ACAGCCATTTTGATGAGTT.............................................................................................................................................	19	1	47.00	47	6	0	2	0	1	1	0	0	0	0	4	33	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTAAA..........................................................................................................................................	26	1	40.00	40	0	0	0	0	0	0	4	2	22	9	2	1	0	0	0	0	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGTT.............................................................................................................................................	22	1	37.00	37	2	0	0	28	1	2	0	0	0	2	0	2	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTT............................................................................................................................................	24	1	26.00	26	0	0	0	11	0	0	0	0	0	2	0	13	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGA...................................................................................................................................................	17	4	26.00	104	0	0	0	0	0	0	12	16	5	9	62	0	0	0	0	0	0
.........................................................................................................................................................................................ACAGCCATTTTGATGAGT..............................................................................................................................................	18	1	24.00	24	7	0	0	0	0	2	0	0	0	1	4	10	0	0	0	0	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGT..............................................................................................................................................	21	1	21.00	21	2	0	0	14	0	4	0	0	0	0	0	1	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTTCG..........................................................................................................................................	26	1	19.00	19	0	0	0	0	0	19	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGG..............................................................................................................................................	22	1	18.00	18	13	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGC..............................................................................................................................................	22	1	18.00	18	10	0	2	0	0	0	0	0	0	0	6	0	0	0	0	0	0
.........................................................................................................................................CTCCTCAAAG-GGTTGTGAAAT..........................................................................................................................................................................................	21	1	16.00	16	4	1	1	1	0	7	0	0	0	2	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAC...............................................................................................................................................	21	1	14.00	14	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................TCACAGCCATTTTGATGAGTT.............................................................................................................................................	21	1	11.00	11	0	0	0	2	0	0	0	1	1	0	0	7	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTG....................................................................................................................................................	16	4	9.25	37	0	0	0	0	0	0	1	0	0	0	36	0	0	0	0	0	0
..........................................................................................................................................TCCTCAAAG-GGTTGTGAAATG.........................................................................................................................................................................................	21	1	8.00	8	0	0	0	2	0	3	0	0	0	0	0	3	0	0	0	0	0
.........................................................................................................................................CTCCTCAAAG-GGTTGTGAA............................................................................................................................................................................................	19	1	8.00	8	0	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................GCCATTTTGATGAGTT.............................................................................................................................................	16	1	8.00	8	0	0	0	0	0	0	0	0	0	1	7	0	0	0	0	0	0
.........................................................................................................................................CTCCTCAAAG-GGTTGTGA.............................................................................................................................................................................................	18	1	7.00	7	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................TCGACTATT--A-TCTACTCA....................................................................................................................................................................	18	1	7.00	7	0	0	5	0	0	2	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTC.............................................................................................................................................	23	1	5.00	5	1	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0
.........................................................................................................................................CTCCTCAAAG-GGTTGTGAAA...........................................................................................................................................................................................	20	1	5.00	5	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTT.....................................................................................................................................................	15	5	4.20	21	0	0	0	0	0	0	0	0	1	1	19	0	0	0	0	0	0
......................................................................................................................................................................................ATCACAGCCATTTTGATG.................................................................................................................................................	18	1	4.00	4	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGCAA............................................................................................................................................	24	1	4.00	4	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGG................................................................................................................................................	20	1	4.00	4	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTC............................................................................................................................................	24	1	4.00	4	0	0	0	2	0	0	0	0	0	1	0	1	0	0	0	0	0
.........................................................................................................................................CTCCTCAAAG-GGTTGTGAAATGT........................................................................................................................................................................................	23	1	3.00	3	0	0	0	0	1	0	0	0	0	1	0	1	0	0	0	0	0
..........................................................................................................................................TCCTCAAAG-GGTTGTGAAAT..........................................................................................................................................................................................	20	1	3.00	3	1	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGA..............................................................................................................................................	22	1	3.00	3	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................CAGCCATTTTGATGAGTT.............................................................................................................................................	18	1	3.00	3	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAG...............................................................................................................................................	20	1	3.00	3	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................CACAGCCATTTTGATGAGT..............................................................................................................................................	19	1	3.00	3	1	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0
..........................................................................................................................................TCCTCAAAG-GGTTGTGAA............................................................................................................................................................................................	18	1	3.00	3	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................TCGTGCGAA--TC------TCGGCAG...................................................................................................................	18	1	3.00	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................ATATCACAGCCATTTTGATGAGTT.............................................................................................................................................	24	1	2.00	2	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0
.........................................................................................................................................................................................ACAGCCATTTTGATGAGTTA............................................................................................................................................	20	1	2.00	2	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0
....................................................................................................................................................................................ATATCACAGCCATTTTGA...................................................................................................................................................	18	3	2.00	6	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGTTTCG..........................................................................................................................................	25	1	2.00	2	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGCA.............................................................................................................................................	23	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGTTT............................................................................................................................................	23	1	2.00	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................TCACAGCCATTTTGATGAGT..............................................................................................................................................	20	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0
.........................................................................................................................................................................................ACAGCCATTTTGATGAGTTAA...........................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
.........................................................................................................................................CTCCTCAAAG-GGTTGTGAAATGTCG......................................................................................................................................................................................	25	1	2.00	2	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................TCGTGCGAA--TC------TCGGCAGCG.................................................................................................................	20	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................CAAGC-C-----------------------------A--T-AGTTCTTACGTAA................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGT................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0

droSec2

C--AGTTCGC---------GAATTGG----GTATAACGATTGGA--TGC-----------TAAGCCAACAAGTGTTCGTGATCCAAGC-C-----------------------------A--T-AGTTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTCGACTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TC------TGGTCAGCGGATCG----------A---AAAACA---------------------------------------------T---ATTT----------------------------------C	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTT.............................................................................................................................................	23	1	46028.00	46028	606	546	33507	11369
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGT..............................................................................................................................................	22	1	6525.00	6525	435	104	1443	4543
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAG...............................................................................................................................................	21	1	597.00	597	57	14	48	478
.........................................................................................................................................CTCCTCAAAG-GGTTGTGAAATG.........................................................................................................................................................................................	22	1	491.00	491	17	6	377	91
.........................................................................................................................................................................................ACAGCCATTTTGATGAGTT.............................................................................................................................................	19	1	290.00	290	0	0	223	67
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTT............................................................................................................................................	24	1	165.00	165	4	8	81	72
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGTT.............................................................................................................................................	22	1	68.00	68	58	0	8	2
.......................................................................................................................................................................................TCACAGCCATTTTGATGAGTT.............................................................................................................................................	21	1	58.00	58	3	0	52	3
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTA............................................................................................................................................	24	1	52.00	52	3	1	36	12
.....................................................................................................................................................................................TATCACAGCCATTTTGATG.................................................................................................................................................	19	1	52.00	52	7	0	0	45
.........................................................................................................................................................................................ACAGCCATTTTGATGAGT..............................................................................................................................................	18	1	51.00	51	0	0	9	42
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTC.............................................................................................................................................	23	1	37.00	37	1	1	27	8
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTA.............................................................................................................................................	23	1	35.00	35	1	0	11	23
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTC............................................................................................................................................	24	1	32.00	32	0	1	18	13
.....................................................................................................................................................................................TATCACAGCCATTTTGATGA................................................................................................................................................	20	1	31.00	31	4	0	0	27
..........................................................................................................................................TCCTCAAAG-GGTTGTGAAATG.........................................................................................................................................................................................	21	1	27.00	27	1	0	8	18
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGT..............................................................................................................................................	21	1	27.00	27	26	0	0	1
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGC..............................................................................................................................................	22	1	13.00	13	0	0	5	8
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGA..............................................................................................................................................	22	1	12.00	12	1	0	1	10
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTAA...........................................................................................................................................	25	1	11.00	11	2	1	5	3
..........................................................................................................................................................................................CAGCCATTTTGATGAGTT.............................................................................................................................................	18	1	10.00	10	0	0	10	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAG...............................................................................................................................................	20	1	6.00	6	6	0	0	0
........................................................................................................................................................................................CACAGCCATTTTGATGAGTT.............................................................................................................................................	20	1	5.00	5	0	0	5	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGG..............................................................................................................................................	22	1	4.00	4	0	0	2	2
.........................................................................................................................................CTCCTCAAAG-GGTTGTGTT............................................................................................................................................................................................	19	1	4.00	4	2	0	0	2
.........................................................................................................................................CTCCTCAAAG-GGTTGTGAA............................................................................................................................................................................................	19	1	4.00	4	0	0	4	0
.............................................................................................................................................TCAAAG-GGTTGTGAAATG.........................................................................................................................................................................................	18	1	4.00	4	1	0	0	3
.........................................................................................................................................CTCCTCAAAG-GGTTGTGA.............................................................................................................................................................................................	18	1	4.00	4	0	0	1	3
.........................................................................................................................................CTCCTCAAAG-GGTTGTGAAA...........................................................................................................................................................................................	20	1	3.00	3	1	0	1	1
.......................................................................................................................................................................................TCACAGCCATTTTGATGAGT..............................................................................................................................................	20	1	3.00	3	0	0	1	2
.........................................................................................................................................CTCCTCAAAG-GGTTGTGAAAT..........................................................................................................................................................................................	21	1	3.00	3	0	0	3	0
.....................................................................................................................................................................................TATCACAGCCATTTTGAT..................................................................................................................................................	18	1	3.00	3	0	0	1	2
.....................................................................................................................................................................................TATCACAGCCATTTTGAGT.................................................................................................................................................	19	5	2.20	11	1	0	4	6
....................................................................................................................................................................................ATATCACAGCCATTTTGATGAGTT.............................................................................................................................................	24	1	2.00	2	0	0	2	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAT...............................................................................................................................................	21	1	2.00	2	1	0	0	1
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTAAA..........................................................................................................................................	26	1	2.00	2	0	0	2	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGT................................................................................................................................................	20	1	2.00	2	0	0	0	2
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTG............................................................................................................................................	24	1	2.00	2	0	0	1	1
..........................................................................................................................................TCCTCAAAG-GGTTGTGAAA...........................................................................................................................................................................................	19	1	2.00	2	1	0	0	1
.........................................................................................................................................CTCCTCAAAG-GGTTGTGAAATA.........................................................................................................................................................................................	22	1	1.00	1	0	0	1	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAC...............................................................................................................................................	21	1	1.00	1	1	0	0	0
.........................................................................................................................................................................................ACAGCCATTTTGATGAGC..............................................................................................................................................	18	1	1.00	1	0	0	0	1
.....................................................................................................................................................................................TATCACAGCCATTTTGATA.................................................................................................................................................	19	2	1.00	2	0	0	0	2
..........................................................................................................................................TCCTCAAAG-GGTTGTGAAAT..........................................................................................................................................................................................	20	1	1.00	1	0	0	0	1
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGTC.............................................................................................................................................	22	1	1.00	1	0	0	0	1
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGG..............................................................................................................................................	21	1	1.00	1	1	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAAA..............................................................................................................................................	22	1	1.00	1	1	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATT.................................................................................................................................................	19	1	1.00	1	1	0	0	0

droYak3

T--TG-------------------------------------GA--TGC-----------TAAGCCAACAAGTGTTCGTGATCCAAGC-C-----------------------------A--T-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTCGCCTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TC------TCGGCAACTTATTTCATGTATTTC-----AAACA---------------------------------------------T---ATTT----------------------------------C	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTT.............................................................................................................................................	23	1	35057.00	35057	44	1354	18594	6623	2199	5909	334	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGT..............................................................................................................................................	22	1	4356.00	4356	39	437	1176	541	608	1477	77	1	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTC.............................................................................................................................................	23	1	1380.00	1380	0	1	1361	3	5	10	0	0	0	0	0
.........................................................................................................................................CTCCTCAAAG-GGTTGTGAAATG.........................................................................................................................................................................................	22	1	1187.00	1187	0	6	960	211	4	4	2	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTT............................................................................................................................................	24	1	331.00	331	0	15	130	35	37	104	10	0	0	0	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGTT.............................................................................................................................................	22	1	274.00	274	0	119	153	1	1	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAG...............................................................................................................................................	21	1	256.00	256	70	34	30	18	30	70	4	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGC..............................................................................................................................................	22	1	215.00	215	2	0	203	3	1	6	0	0	0	0	0
.........................................................................................................................................................................................ACAGCCATTTTGATGAGTT.............................................................................................................................................	19	1	157.00	157	2	0	3	58	32	59	3	0	0	0	0
.........................................................................................................................................CTCCTCAAAG-GGTTGTGAAAT..........................................................................................................................................................................................	21	1	41.00	41	2	0	36	2	1	0	0	0	0	0	0
.........................................................................................................................................................................................ACAGCCATTTTGATGAGT..............................................................................................................................................	18	1	41.00	41	1	0	0	11	10	19	0	0	0	0	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGT..............................................................................................................................................	21	1	37.00	37	0	32	5	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTA............................................................................................................................................	24	1	35.00	35	0	0	15	6	3	10	1	0	0	0	0
........................................................................................................................................................................................CACAGCCATTTTGATGAGTT.............................................................................................................................................	20	1	32.00	32	0	1	28	2	0	1	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTC............................................................................................................................................	24	1	31.00	31	0	0	16	5	1	8	1	0	0	0	0
.......................................................................................................................................................................................TCACAGCCATTTTGATGAGTT.............................................................................................................................................	21	1	30.00	30	0	4	14	6	1	5	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTG.............................................................................................................................................	23	1	27.00	27	0	0	22	1	2	2	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATG.................................................................................................................................................	19	1	26.00	26	14	6	3	0	1	2	0	0	0	0	0
.........................................................................................................................................CTCCTCAAAG-GGTTGTGAAA...........................................................................................................................................................................................	20	1	16.00	16	0	1	11	0	0	4	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTA.............................................................................................................................................	23	1	13.00	13	0	0	1	0	10	2	0	0	0	0	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGTC.............................................................................................................................................	22	1	13.00	13	0	0	13	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGA................................................................................................................................................	20	1	10.00	10	4	4	1	0	1	0	0	0	0	0	0
..........................................................................................................................................................................................CAGCCATTTTGATGAGTT.............................................................................................................................................	18	1	9.00	9	0	0	6	2	0	1	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGCC.............................................................................................................................................	23	1	8.00	8	0	0	8	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTG............................................................................................................................................	24	1	8.00	8	0	1	3	0	2	2	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGG..............................................................................................................................................	22	1	8.00	8	3	0	0	1	1	3	0	0	0	0	0
..........................................................................................................................................TCCTCAAAG-GGTTGTGAAATG.........................................................................................................................................................................................	21	1	7.00	7	0	2	2	2	0	1	0	0	0	0	0
.......................................................................................................................................................................................TCACAGCCATTTTGATGAGT..............................................................................................................................................	20	1	7.00	7	0	2	2	0	3	0	0	0	0	0	0
.........................................................................................................................................CTCCTCAAAG-GGTTGTGAAATGT........................................................................................................................................................................................	23	1	6.00	6	0	0	6	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAC...............................................................................................................................................	21	1	6.00	6	4	0	2	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGA..............................................................................................................................................	22	1	4.00	4	0	0	1	1	0	2	0	0	0	0	0
........................................................................................................................................................................................CACAGCCATTTTGATGAGTC.............................................................................................................................................	20	1	4.00	4	0	0	4	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAA...............................................................................................................................................	21	1	4.00	4	2	0	0	0	1	1	0	0	0	0	0
................................................................................................................................................................TCGCCTATT--A-TCTACTCA....................................................................................................................................................................	18	1	3.00	3	1	0	2	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................TCGTGCGAA--TC------TCGGCAACT.................................................................................................................	20	1	3.00	3	3	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGTTT............................................................................................................................................	23	1	3.00	3	0	2	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTTT...........................................................................................................................................	25	1	3.00	3	0	1	1	0	0	1	0	0	0	0	0
.........................................................................................................................................CTCCTCAAAG-GGTTGTGAA............................................................................................................................................................................................	19	1	2.00	2	0	0	1	0	0	1	0	0	0	0	0
.........................................................................................................................................CTCCTCAAAG-GGTTGTGAAATGA........................................................................................................................................................................................	23	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0

droEre2

C--GATTGG---------------------GGATAACGATTGGA--TGC-----------TAAGCCAACAAGTGTTCGTGATCCAAGA-C-----------------------------A--C-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTCGACTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TT------TAAAAAGCGGGTTA----------A-G-AAAACA---------------------------------------------T---ATTTCA---------------------------------	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTT.............................................................................................................................................	23	1	43373.00	43373	2247	14749	4233	4036	681	17388	39
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGT..............................................................................................................................................	22	1	14339.00	14339	1317	1875	1350	555	142	9099	1
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAG...............................................................................................................................................	21	1	1143.00	1143	128	46	72	19	8	870	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTC.............................................................................................................................................	23	1	778.00	778	5	572	8	2	0	191	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTT............................................................................................................................................	24	1	394.00	394	26	177	47	9	13	122	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGTT.............................................................................................................................................	22	1	273.00	273	164	92	4	1	0	12	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGC..............................................................................................................................................	22	1	235.00	235	0	210	6	0	0	19	0
.........................................................................................................................................CTCCTCAAAG-GGTTGTGAAATG.........................................................................................................................................................................................	22	1	189.00	189	15	9	7	69	12	77	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTA.............................................................................................................................................	23	1	164.00	164	0	1	2	0	1	160	0
.........................................................................................................................................................................................ACAGCCATTTTGATGAGTT.............................................................................................................................................	19	1	148.00	148	1	2	47	44	3	51	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGT..............................................................................................................................................	21	1	101.00	101	86	12	0	0	0	3	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTG.............................................................................................................................................	23	1	95.00	95	2	13	0	2	0	78	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTC............................................................................................................................................	24	1	93.00	93	5	41	6	5	2	34	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTA............................................................................................................................................	24	1	85.00	85	14	23	13	0	5	30	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATG.................................................................................................................................................	19	1	54.00	54	6	5	0	0	0	42	1
.....................................................................................................................................................................................TATCACAGCCATTTTGATGA................................................................................................................................................	20	1	52.00	52	15	3	5	0	0	29	0
.........................................................................................................................................................................................ACAGCCATTTTGATGAGT..............................................................................................................................................	18	1	49.00	49	1	0	10	7	0	31	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTG............................................................................................................................................	24	1	46.00	46	7	1	4	0	0	34	0
.......................................................................................................................................................................................TCACAGCCATTTTGATGAGTT.............................................................................................................................................	21	1	45.00	45	5	17	2	3	0	18	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGA..............................................................................................................................................	22	1	29.00	29	3	1	3	0	1	21	0
........................................................................................................................................................................................CACAGCCATTTTGATGAGTT.............................................................................................................................................	20	1	26.00	26	1	9	2	1	0	13	0
........................................................................................................................................................................................CACAGCCATTTTGATGAGT..............................................................................................................................................	19	1	12.00	12	1	0	0	1	0	10	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTAA...........................................................................................................................................	25	1	11.00	11	0	0	4	0	0	7	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAG...............................................................................................................................................	20	1	11.00	11	10	0	1	0	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGAT..................................................................................................................................................	18	1	10.00	10	0	0	0	1	0	9	0
..........................................................................................................................................................................................CAGCCATTTTGATGAGTT.............................................................................................................................................	18	1	10.00	10	0	0	1	3	0	6	0
.......................................................................................................................................................................................TCACAGCCATTTTGATGAGT..............................................................................................................................................	20	1	8.00	8	1	1	0	0	0	6	0
.........................................................................................................................................CTCCTCAAAG-GGTTGTGAAATT.........................................................................................................................................................................................	22	1	6.00	6	0	0	0	4	0	2	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGCC.............................................................................................................................................	23	1	5.00	5	0	4	0	0	0	1	0
.........................................................................................................................................CTCCTCAAAG-GGTTGTGAAA...........................................................................................................................................................................................	20	1	5.00	5	0	0	1	0	0	4	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAGG..............................................................................................................................................	22	1	5.00	5	0	0	1	1	1	2	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGTTT............................................................................................................................................	23	1	4.00	4	1	1	0	0	0	2	0
..........................................................................................................................................TCCTCAAAG-GGTTGTGAAATG.........................................................................................................................................................................................	21	1	4.00	4	1	0	0	1	0	2	0
......................................................................................................................................................................................ATCACAGCCATTTTGATGAGTC.............................................................................................................................................	22	1	4.00	4	0	4	0	0	0	0	0
........................................................................................................................................................................................CACAGCCATTTTGATGAG...............................................................................................................................................	18	1	4.00	4	0	0	0	0	0	4	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAA...............................................................................................................................................	21	1	3.00	3	0	1	0	0	0	2	0
....................................................................................................................................................................................ATATCACAGCCATTTTGATGAGTT.............................................................................................................................................	24	1	3.00	3	1	1	0	1	0	0	0
.....................................................................................................................................................................................TATCACAGCCATTTTGATGAT...............................................................................................................................................	21	1	3.00	3	0	0	0	1	0	2	0
.........................................................................................................................................CTCCTCAAAG-GGTTGTGAAAT..........................................................................................................................................................................................	21	1	3.00	3	0	0	1	1	0	1	0
.....................................................................................................................................................................................TATCACAGCCATTTTGAGT.................................................................................................................................................	19	7	2.00	14	1	0	0	0	2	11	0

dpe-mir-13a

scaffold_0:10660083-10660156 -

Known

Unknown

antisense_to_intron

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-29.7	-29.7	-29.6