ID:

dpe-mir-125-1

 Coordinate:

scaffold_1:5116595-5116704 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

antisense_to_intron

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-22.1 -22.1 -21.9

Flybase annnotation

Antisense to intron [Dper\GL18747-in]; pre_miRNA [Dper\mir-125-1-RM]; miRNA [Dper\miR-125-1-RA]

No Repeatable elements found

mature

  1. dpe-mir-125-1  scaffold_1:5116623-5116644 +
  2. dpe-mir-125-2  scaffold_1:5117144-5117165 +
  3. dpe-mir-125-3  scaffold_2335:2549-2570 +
star

  1. dpe-mir-125-1  scaffold_1:5116662-5116682 +
  2. dpe-mir-125-2  scaffold_1:5117183-5117203 +
  3. dpe-mir-125-3  scaffold_2335:2588-2608 +

Sense Strand Reads

AAACGTCCGAGTATCCAAGTATCCGAGTAGTCCCGAGTATTGGTATGAGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTATACAAAAAAAAAGCAAAAAAGAAAAGCAAAAAATGCAAAAACTGAATGA

***************************************************************((((((....(((((..((.((((....(((((((((...............)))))))))....)))).)).)))))..))))))....********************************************************* 		Read size # Mismatch Hit Count Total Norm Total V057

head

 M042

female body

 V050

head

 V111

male body		 M021

embryo

 V042

embryo
..............................................................................TCCCTGAGACCCTAACTTGTGA.............................................................................................................. 22 0 3 10471.33 31414 11956 9929 8966 560 1 2
..............................................................................TCCCTGAGACCCTAACTTGTG............................................................................................................... 21 0 3 2249.67 6749 2352 2222 2089 86 0 0
..............................................................................TCCCTGAGACCCTAACTTGT................................................................................................................ 20 0 3 857.33 2572 1297 203 1017 55 0 0
...............................................................................CCCTGAGACCCTAACTTGTGA.............................................................................................................. 21 0 3 281.00 843 6 827 10 0 0 0
..............................................................................TCCCTGAGGCCCTAACTTGTGA.............................................................................................................. 22 1 3 130.67 392 32 350 10 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTGAA............................................................................................................. 23 1 3 125.00 375 107 173 90 5 0 0
..............................................................................TCCCTGAGACCCTAACTTGTGT.............................................................................................................. 22 1 3 116.33 349 201 44 95 9 0 0
................................................................................CCTGAGACCCTAACTTGTGA.............................................................................................................. 20 0 3 72.00 216 76 46 94 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTGC.............................................................................................................. 22 1 3 67.00 201 130 10 61 0 0 0
...............................................................................CCCTGAGACCCTAACTTGTG............................................................................................................... 20 0 3 59.33 178 0 177 1 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGCGA.............................................................................................................. 22 1 3 47.00 141 99 1 41 0 0 0
.....................................................................................................................ACAAGTTTTGATCTCCGGTAT........................................................................ 21 0 3 42.33 127 63 20 23 21 0 0
..............................................................................TCCCTGAGACCCTAACTTG................................................................................................................. 19 0 3 35.67 107 42 31 34 0 0 0
..............................................................................TCCCTGAGGCCCTAACTTGTG............................................................................................................... 21 1 3 34.33 103 10 91 2 0 0 0
..............................................................................TCCCTGAGTCCCTAACTTGTGA.............................................................................................................. 22 1 3 33.00 99 27 70 2 0 0 0
..............................................................................TCCCTGAGCCCCTAACTTGTGA.............................................................................................................. 22 1 3 31.67 95 19 71 5 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTGACT............................................................................................................ 24 0 3 27.67 83 22 48 13 0 0 0
..............................................................................TCCCTGAGACCCTACCTTGTGA.............................................................................................................. 22 1 3 26.67 80 53 0 27 0 0 0
..............................................................................TCCCTGAGACCCTCACTTGTGA.............................................................................................................. 22 1 3 26.00 78 58 0 20 0 0 0
..............................................................................TACCTGAGACCCTAACTTGTGA.............................................................................................................. 22 1 3 22.67 68 55 2 11 0 0 0
..............................................................................TCACTGAGACCCTAACTTGTGA.............................................................................................................. 22 1 3 22.67 68 52 0 16 0 0 0
..............................................................................GCCCTGAGACCCTAACTTGTGA.............................................................................................................. 22 1 3 21.67 65 23 38 4 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTGG.............................................................................................................. 22 1 3 21.33 64 22 34 7 1 0 0
..............................................................................TCCCTGAGACACTAACTTGTGA.............................................................................................................. 22 1 3 21.33 64 46 0 17 1 0 0
..............................................................................TCCCTGAGACCCTAACTGGTGA.............................................................................................................. 22 1 3 20.00 60 56 0 4 0 0 0
..............................................................................TCCCTCAGACCCTAACTTGTGA.............................................................................................................. 22 1 3 17.00 51 17 1 32 1 0 0
...............................................................................CCCTGAGAGCCTAACTTGTGA.............................................................................................................. 21 1 3 15.00 45 0 45 0 0 0 0
................................................................................CCTGAGACCCTAACTTGTG............................................................................................................... 19 0 3 14.67 44 15 7 22 0 0 0
..............................................................................CCCCTGAGACCCTAACTTGTGA.............................................................................................................. 22 1 3 14.33 43 26 8 9 0 0 0
..............................................................................TCCCTGAGACCCTAACCTGTGA.............................................................................................................. 22 1 3 14.33 43 22 8 13 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTGAC............................................................................................................. 23 0 3 14.33 43 10 28 3 0 2 0
..............................................................................TCCCTGAGACCCTAACTTGTTA.............................................................................................................. 22 1 3 14.00 42 30 4 8 0 0 0
.................................................................................CTGAGACCCTAACTTGTGA.............................................................................................................. 19 0 3 14.00 42 10 13 14 5 0 0
..............................................................................TCCCTGGGACCCTAACTTGTGA.............................................................................................................. 22 1 3 13.67 41 29 3 9 0 0 0
..............................................................................TCCCTGAGACCCTAACTCGTGA.............................................................................................................. 22 1 3 13.67 41 26 0 15 0 0 0
..............................................................................TCCCGGAGACCCTAACTTGTGA.............................................................................................................. 22 1 3 13.00 39 34 1 4 0 0 0
..............................................................................ACCCTGAGACCCTAACTTGTGA.............................................................................................................. 22 1 3 12.33 37 22 10 4 1 0 0
...................................................................................................................TCACAAGTTTTGATCTCCGGTAT........................................................................ 23 0 3 12.33 37 18 9 4 6 0 0
..............................................................................TCCCTGCGACCCTAACTTGTGA.............................................................................................................. 22 1 3 12.33 37 29 0 8 0 0 0
..............................................................................TCCCTGAGACCCTAGCTTGTGA.............................................................................................................. 22 1 3 12.00 36 25 4 7 0 0 0
..............................................................................TCCCTGAGACCCTGACTTGTGA.............................................................................................................. 22 1 3 12.00 36 26 2 6 2 0 0
..............................................................................TCCCTGAGACCCCAACTTGTGA.............................................................................................................. 22 1 3 11.00 33 20 4 9 0 0 0
..............................................................................TCCCTGAGAACCTAACTTGTGA.............................................................................................................. 22 1 3 11.00 33 23 1 9 0 0 0
..............................................................................TCCCTGAGACCCTAAATTGTGA.............................................................................................................. 22 1 3 10.33 31 19 1 11 0 0 0
..............................................................................TCCCTGAGTCCCTAACTTGTG............................................................................................................... 21 1 3 10.00 30 6 23 1 0 0 0
..............................................................................TCCATGAGACCCTAACTTGTGA.............................................................................................................. 22 1 3 9.67 29 23 1 5 0 0 0
..............................................................................TCCCTGAGACCCTAACTTCTGA.............................................................................................................. 22 1 3 9.33 28 21 2 3 2 0 0
..............................................................................TCCCTGAGCCCCTAACTTGTG............................................................................................................... 21 1 3 9.33 28 4 22 2 0 0 0
..............................................................................TCCCTAAGACCCTAACTTGTGA.............................................................................................................. 22 1 3 9.33 28 5 1 22 0 0 0
..............................................................................TCCCTGAGACCCTAACTTTTGA.............................................................................................................. 22 1 3 9.00 27 15 4 8 0 0 0
.............................................................................CTCCCTGAGACCCTAACTTGTGA.............................................................................................................. 23 1 3 8.33 25 9 12 4 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTCA.............................................................................................................. 22 1 3 8.33 25 19 1 5 0 0 0
..............................................................................TCCCCGAGACCCTAACTTGTGA.............................................................................................................. 22 1 3 8.33 25 16 2 7 0 0 0
..............................................................................TCCCTGAGACCCTAACTGGTG............................................................................................................... 21 1 3 8.33 25 21 0 4 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGGGA.............................................................................................................. 22 1 3 7.67 23 14 4 5 0 0 0
..............................................................................TCCCTGAGACCCTAACGTGTGA.............................................................................................................. 22 1 3 7.67 23 20 0 3 0 0 0
..............................................................................TCCTTGAGACCCTAACTTGTGA.............................................................................................................. 22 1 3 7.67 23 10 1 12 0 0 0
..............................................................................TCCCTGATACCCTAACTTGTGA.............................................................................................................. 22 1 3 7.67 23 10 6 7 0 0 0
..............................................................................TCCCTGAGACTCTAACTTGTGA.............................................................................................................. 22 1 3 7.67 23 15 1 5 2 0 0
..............................................................................TCCCTGAGACCCTAACTTGTAA.............................................................................................................. 22 1 3 7.33 22 5 3 14 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGCG............................................................................................................... 21 1 3 7.33 22 13 0 9 0 0 0
..............................................................................TCTCTGAGACCCTAACTTGTGA.............................................................................................................. 22 1 3 7.33 22 8 0 14 0 0 0
..............................................................................TTCCTGAGACCCTAACTTGTGA.............................................................................................................. 22 1 3 7.00 21 10 1 10 0 0 0
...............................................................................CCCTGAGACCCTAACTTGT................................................................................................................ 19 0 3 6.67 20 0 20 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGAGA.............................................................................................................. 22 1 3 6.67 20 6 4 10 0 0 0
..............................................................................TCCCTGAGACCTTAACTTGTGA.............................................................................................................. 22 1 3 6.67 20 11 2 7 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGA................................................................................................................ 20 1 3 6.67 20 2 15 1 2 0 0
..............................................................................TCGCTGAGACCCTAACTTGTGA.............................................................................................................. 22 1 3 6.33 19 16 0 3 0 0 0
................................................................................CCTGAGACCCTAACTTGT................................................................................................................ 18 0 3 6.33 19 9 1 9 0 0 0
..............................................................................TACCTGAGACCCTAACTTGTG............................................................................................................... 21 1 3 6.33 19 16 0 3 0 0 0
..............................................................................TCCCTGACACCCTAACTTGTGA.............................................................................................................. 22 1 3 6.33 19 15 3 1 0 0 0
..............................................................................TCCCTGAGACCATAACTTGTGA.............................................................................................................. 22 1 3 6.00 18 11 1 5 1 0 0
..............................................................................TCCCTGAGACCCTAACTTGTGAT............................................................................................................. 23 1 3 5.67 17 9 5 3 0 0 0
..............................................................................TCCCTGAGACCCTAACATGTGA.............................................................................................................. 22 1 3 5.67 17 11 1 5 0 0 0
..............................................................................TCCCTGAGACGCTAACTTGTGA.............................................................................................................. 22 1 3 5.67 17 16 0 1 0 0 0
..............................................................................TCCCTGAGACCCTATCTTGTGA.............................................................................................................. 22 1 3 5.67 17 14 1 2 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTGACTT........................................................................................................... 25 0 3 5.67 17 1 14 2 0 0 0
..............................................................................TCCCTGAGACCCTTACTTGTGA.............................................................................................................. 22 1 3 5.67 17 13 2 2 0 0 0
..............................................................................TCCCTGAGACCCTCACTTGT................................................................................................................ 20 1 3 5.33 16 13 0 3 0 0 0
..............................................................................TCCCTGTGACCCTAACTTGTGA.............................................................................................................. 22 1 3 5.33 16 11 1 4 0 0 0
..............................................................................TCCCTGAGACCCTAACCTGTG............................................................................................................... 21 1 3 5.33 16 7 1 8 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTT............................................................................................................... 21 1 3 5.33 16 13 0 3 0 0 0
..............................................................................TCCCTGAGACCCTACCTTGTG............................................................................................................... 21 1 3 5.00 15 11 0 4 0 0 0
..............................................................................TCCCTGAGACCCTAACTTCTG............................................................................................................... 21 1 3 5.00 15 9 0 6 0 0 0
..............................................................................TGCCTGAGACCCTAACTTGTGA.............................................................................................................. 22 1 3 5.00 15 13 1 1 0 0 0
..............................................................................TCCCTGAGACCCTAATTTGTGA.............................................................................................................. 22 1 3 5.00 15 4 1 10 0 0 0
..............................................................................TCCCTGAGAGCCTAACTTGTGA.............................................................................................................. 22 1 3 5.00 15 14 0 1 0 0 0
...............................................................................CCCTGAGAACCTAACTTGTGA.............................................................................................................. 21 1 3 4.67 14 0 14 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGC................................................................................................................ 20 1 3 4.67 14 8 0 6 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTGACTTT.......................................................................................................... 26 0 3 4.67 14 1 11 2 0 0 0
..............................................................................TCCCTGAGATCCTAACTTGTGA.............................................................................................................. 22 1 3 4.67 14 10 0 4 0 0 0
..............................................................................TACCTGAGACCCTAACTTGT................................................................................................................ 20 1 3 4.33 13 11 0 2 0 0 0
..............................................................................TCCCTGAGACCCTCACTTGTG............................................................................................................... 21 1 3 4.33 13 9 0 4 0 0 0
..............................................................................TCCCTGAGACACTAACTTGTG............................................................................................................... 21 1 3 4.33 13 9 0 4 0 0 0
..............................................................................TCCCTGAGACCCTAACTTATGA.............................................................................................................. 22 1 3 4.33 13 10 0 3 0 0 0
..............................................................................TCCCAGAGACCCTAACTTGTGA.............................................................................................................. 22 1 3 4.33 13 11 0 2 0 0 0
..............................................................................TCCCTGGGACCCTAACTTGTG............................................................................................................... 21 1 3 4.33 13 5 2 6 0 0 0
..................................................................................TGAGACCCTAACTTGTGA.............................................................................................................. 18 0 3 4.00 12 1 9 2 0 0 0
..............................................................................TCCCTGAGACCCGAACTTGTGA.............................................................................................................. 22 1 3 4.00 12 10 0 2 0 0 0
..............................................................................TCCGTGAGACCCTAACTTGTGA.............................................................................................................. 22 1 3 4.00 12 11 0 1 0 0 0
..............................................................................TCCCTGAGACCCTAACGTGTG............................................................................................................... 21 1 3 4.00 12 9 0 3 0 0 0
..............................................................................TCACTGAGACCCTAACTTGTG............................................................................................................... 21 1 3 4.00 12 10 1 1 0 0 0
..............................................................................TCCCTGAGACCCTAGCTTGTG............................................................................................................... 21 1 3 3.67 11 11 0 0 0 0 0
..............................................................................TCCCTGAGACCCTCACTTGTGC.............................................................................................................. 22 2 3 3.67 11 9 0 2 0 0 0
..............................................................................TCCCTGTGACCCTAACTTGTG............................................................................................................... 21 1 3 3.67 11 6 1 4 0 0 0
.............................................................................TTCCCTGAGACCCTAACTTGTGA.............................................................................................................. 23 0 3 3.67 11 0 11 0 0 0 0
..............................................................................TCCCTGAGACCCTACCTTGT................................................................................................................ 20 1 3 3.67 11 6 0 5 0 0 0
..............................................................................TCACTGAGACCCTAACTTGT................................................................................................................ 20 1 3 3.67 11 9 0 2 0 0 0
..............................................................................TCCCTGAGACCCTAACTTTTG............................................................................................................... 21 1 3 3.33 10 7 0 3 0 0 0
..............................................................................TCCCTGAGACCCTAACTGGCGA.............................................................................................................. 22 2 3 3.33 10 7 0 3 0 0 0
...............................................................................CCCTGAGACCCTAACTTGTGAA............................................................................................................. 22 1 3 3.33 10 0 10 0 0 0 0
..............................................................................TCCCTTAGACCCTAACTTGTGA.............................................................................................................. 22 1 3 3.33 10 2 2 5 1 0 0
..............................................................................TCCCTGAGACCCTACCTTGTGC.............................................................................................................. 22 2 3 3.33 10 5 0 5 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTC............................................................................................................... 21 1 3 3.33 10 6 1 3 0 0 0
..............................................................................TCCCTGAGGCCCTAACTTGT................................................................................................................ 20 1 3 3.00 9 2 6 1 0 0 0
..............................................................................TCGCTGAGACCCTAACTTGTG............................................................................................................... 21 1 3 3.00 9 6 0 2 1 0 0
..............................................................................TCCCCGAGACCCTAACTTGTG............................................................................................................... 21 1 3 3.00 9 4 1 4 0 0 0
..............................................................................TCCCTGAAACCCTAACTTGTGA.............................................................................................................. 22 1 3 3.00 9 6 1 2 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGAG............................................................................................................... 21 1 3 2.67 8 2 3 3 0 0 0
..............................................................................CCCCTGAGACCCTAACTTGTG............................................................................................................... 21 1 3 2.67 8 3 3 2 0 0 0
..............................................................................TACCTGAGACACTAACTTGTGA.............................................................................................................. 22 2 3 2.67 8 7 0 1 0 0 0
..................................................................................................................TTCACAAGTTTTGATCTCCGGTAT........................................................................ 24 0 3 2.67 8 4 1 0 3 0 0
..............................................................................TCCCTGAGACCCTAACTTGCGC.............................................................................................................. 22 2 3 2.67 8 3 0 5 0 0 0
..............................................................................TCCCTGAGACCCTAACTAGTGA.............................................................................................................. 22 1 3 2.67 8 4 0 4 0 0 0
..............................................................................TCCCTCAGACCCTAACTTGTG............................................................................................................... 21 1 3 2.33 7 5 0 2 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTGAAA............................................................................................................ 24 2 3 2.33 7 2 2 3 0 0 0
..............................................................................TCCCTGAGGCCCTAACTTGTGT.............................................................................................................. 22 2 3 2.33 7 1 6 0 0 0 0
...............................................................................CCCTGAGACCCTAACTTGTGACT............................................................................................................ 23 0 3 2.33 7 0 7 0 0 0 0
..............................................................................TCCCTGAGTCCCTAACTTGTGT.............................................................................................................. 22 2 3 2.33 7 6 0 1 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGGG............................................................................................................... 21 1 3 2.33 7 4 1 2 0 0 0
..............................................................................ACCCTGAGACCCTAACTTGTG............................................................................................................... 21 1 3 2.33 7 4 3 0 0 0 0
.................................................................................CTGAGACCCTAACTTGTG............................................................................................................... 18 0 3 2.33 7 2 2 1 2 0 0
..............................................................................TCCCTGATACCCTAACTTGTG............................................................................................................... 21 1 3 2.33 7 6 1 0 0 0 0
..............................................................................TCCCTGAGAACCTAACTTGTG............................................................................................................... 21 1 3 2.33 7 4 0 3 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTA............................................................................................................... 21 1 3 2.33 7 2 3 2 0 0 0
..............................................................................TCCCTAAGACCCTAACTTGTG............................................................................................................... 21 1 3 2.33 7 0 0 7 0 0 0
.............................................................................CTCCCTGAGACCCTAACTTGT................................................................................................................ 21 1 3 2.33 7 4 0 3 0 0 0
..............................................................................TCCCCGAGACCCTAACTTGT................................................................................................................ 20 1 3 2.33 7 6 0 1 0 0 0
..............................................................................TCCCTGAGACACTAACTTGT................................................................................................................ 20 1 3 2.33 7 4 0 3 0 0 0
..............................................................................TCCCTGACACCCTAACTTGTG............................................................................................................... 21 1 3 2.33 7 3 1 2 1 0 0
..............................................................................TCACTGAGACCCTAACTTGTGT.............................................................................................................. 22 2 3 2.33 7 6 0 1 0 0 0
..............................................................................TCCCTGAGAACCTAACTTGT................................................................................................................ 20 1 3 2.33 7 7 0 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTTC.............................................................................................................. 22 2 3 2.00 6 5 0 1 0 0 0
..............................................................................TCCCTGAGACCCTAAATTGT................................................................................................................ 20 1 3 2.00 6 6 0 0 0 0 0
..............................................................................TCTCTGAGACCCTAACTTGTG............................................................................................................... 21 1 3 2.00 6 2 0 4 0 0 0
..............................................................................TCCCTGCGACCCTAACTTGTG............................................................................................................... 21 1 3 2.00 6 5 1 0 0 0 0
..............................................................................TCCCTGAGACCCCAACTTGTG............................................................................................................... 21 1 3 2.00 6 4 1 1 0 0 0
..............................................................................TCCCTGAGACCCTAACTTCT................................................................................................................ 20 1 3 2.00 6 3 0 3 0 0 0
..............................................................................TACCTCAGACCCTAACTTGTGA.............................................................................................................. 22 2 3 2.00 6 3 0 3 0 0 0
..............................................................................TCCCTGAGTCCCTCACTTGTGA.............................................................................................................. 22 2 3 2.00 6 5 0 1 0 0 0
..............................................................................GCCCTGAGACCCTAACTTGTG............................................................................................................... 21 1 3 2.00 6 1 5 0 0 0 0
.............................................................................GTCCCTGAGACCCTAACTTGTGA.............................................................................................................. 23 1 3 2.00 6 1 4 1 0 0 0
..............................................................................TCCCTGAGACCCTAGCTTGT................................................................................................................ 20 1 3 2.00 6 5 0 1 0 0 0
..............................................................................TAACTGAGACCCTAACTTGTGA.............................................................................................................. 22 2 3 2.00 6 4 0 2 0 0 0
..............................................................................TCCCTGAGACCCTAACATGTG............................................................................................................... 21 1 3 2.00 6 6 0 0 0 0 0
.....................................................................................................................ACAAGGTTTGATCTCCGGTAT........................................................................ 21 1 3 2.00 6 6 0 0 0 0 0
..............................................................................TCCCTGAGCCCCTAACTTGTGC.............................................................................................................. 22 2 3 2.00 6 4 2 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTTATG............................................................................................................... 21 1 3 2.00 6 3 0 3 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTGACTTTT......................................................................................................... 27 0 3 2.00 6 1 4 1 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTGAG............................................................................................................. 23 1 3 2.00 6 3 1 1 1 0 0
..............................................................................CCCCTGAGACCCTCACTTGTGA.............................................................................................................. 22 2 3 2.00 6 6 0 0 0 0 0
.............................................................................CTCCCTGAGACCCTAACTTGTG............................................................................................................... 22 1 3 2.00 6 1 3 2 0 0 0
..............................................................................TCCCTCAGACCCTAACTTCTGA.............................................................................................................. 22 2 3 2.00 6 5 0 1 0 0 0
..............................................................................TCCCTGAGATCCTAACTTGTG............................................................................................................... 21 1 3 2.00 6 4 0 2 0 0 0
.............................................................................ATCCCTGAGACCCTAACTTGTGA.............................................................................................................. 23 1 3 2.00 6 0 6 0 0 0 0
..............................................................................TCCCTGAGACCCTAAGTTGTGA.............................................................................................................. 22 1 3 2.00 6 5 0 1 0 0 0
..............................................................................TCCTTGAGACCCTAACTTGTG............................................................................................................... 21 1 3 1.67 5 3 0 2 0 0 0
..............................................................................TCCCTGAGCCCCTAACTTGT................................................................................................................ 20 1 3 1.67 5 2 2 1 0 0 0
.....................................................................................................................ACAAGTTTTGATCTCCGGTA......................................................................... 20 0 3 1.67 5 3 2 0 0 0 0
..............................................................................TCCCTGACACCCTACCTTGTGA.............................................................................................................. 22 2 3 1.67 5 5 0 0 0 0 0
..............................................................................TCCATGAGACCCTAACTTGT................................................................................................................ 20 1 3 1.67 5 4 0 1 0 0 0
..............................................................................TCCCGGAGACCCTAACTTGCGA.............................................................................................................. 22 2 3 1.67 5 5 0 0 0 0 0
..............................................................................TCCCTGAGATCCTAACTTGT................................................................................................................ 20 1 3 1.67 5 3 0 2 0 0 0
..............................................................................TCCCTGAGACACTAACATGTGA.............................................................................................................. 22 2 3 1.67 5 4 0 1 0 0 0
..............................................................................TCCCTGAGACCCTAACCTGCGA.............................................................................................................. 22 2 3 1.67 5 4 0 1 0 0 0
..............................................................................TCCCTGAGAGCCTAACTTGTG............................................................................................................... 21 1 3 1.67 5 5 0 0 0 0 0
..............................................................................TCCCTGAGACCCTGACTTGTG............................................................................................................... 21 1 3 1.67 5 5 0 0 0 0 0
..............................................................................TCCCTGACACCCTAACTTGT................................................................................................................ 20 1 3 1.67 5 3 0 2 0 0 0
..............................................................................TCACTGAGACCCTAAATTGTGA.............................................................................................................. 22 2 3 1.67 5 4 0 1 0 0 0
...............................................................................CCCTGAGAACCTAACTTGTG............................................................................................................... 20 1 3 1.67 5 0 5 0 0 0 0
..............................................................................TCACTGAGACCCTAACTTGCGA.............................................................................................................. 22 2 3 1.67 5 3 0 2 0 0 0
..............................................................................TCCCTGAGACCCTACATTGTGA.............................................................................................................. 22 2 3 1.67 5 1 0 4 0 0 0
..............................................................................TCCCTGAGACCCTTACTTGTG............................................................................................................... 21 1 3 1.67 5 4 0 1 0 0 0
..............................................................................TCCCTGAGTCCCTAACTTGT................................................................................................................ 20 1 3 1.67 5 2 3 0 0 0 0
..............................................................................TCCCTGAGACCCTAAATTGTG............................................................................................................... 21 1 3 1.67 5 3 1 1 0 0 0
..............................................................................TCCCTGAGACCATAACTTGTG............................................................................................................... 21 1 3 1.67 5 4 0 1 0 0 0
..............................................................................TCCCTGAGACCCTAACTCGTG............................................................................................................... 21 1 3 1.67 5 3 1 1 0 0 0
..............................................................................TCCCTGAGAGGCTAACTTGTGA.............................................................................................................. 22 2 3 1.33 4 4 0 0 0 0 0
..............................................................................TCCCTGAGACCTTAACTTGT................................................................................................................ 20 1 3 1.33 4 1 0 2 1 0 0
..............................................................................TCCCTGAGAGCCTAACTTGT................................................................................................................ 20 1 3 1.33 4 4 0 0 0 0 0
................................................................................CCTGAGACACTAACTTGTGA.............................................................................................................. 20 1 3 1.33 4 1 3 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGGGT.............................................................................................................. 22 2 3 1.33 4 4 0 0 0 0 0
..............................................................................TCCCTGAGACCCGAACTTGTG............................................................................................................... 21 1 3 1.33 4 4 0 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGCTA.............................................................................................................. 22 2 3 1.33 4 4 0 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTGGT................................................................................................................ 20 1 3 1.33 4 3 0 1 0 0 0
..............................................................................TCCATGAGACCCTAACATGTG............................................................................................................... 21 2 3 1.33 4 4 0 0 0 0 0
..............................................................................TCCCTGAGAAACTAACTTGTGA.............................................................................................................. 22 2 3 1.33 4 4 0 0 0 0 0
..............................................................................TCCCTGAGTCCCTAACTTGTGC.............................................................................................................. 22 2 3 1.33 4 3 0 1 0 0 0
..............................................................................TCCCTGAGACCCTAACGTGT................................................................................................................ 20 1 3 1.33 4 2 0 2 0 0 0
...............................................................................CCCTGAGAGCCTAACTTGTG............................................................................................................... 20 1 3 1.33 4 0 4 0 0 0 0
..............................................................................TCCCTGAGGCCCTAACTTGTGAA............................................................................................................. 23 2 3 1.33 4 0 4 0 0 0 0
..............................................................................TCCCTGAGACCCTAACCTGTGC.............................................................................................................. 22 2 3 1.33 4 2 0 2 0 0 0
..............................................................................TCCATGAGACACTAACTTGTGA.............................................................................................................. 22 2 3 1.33 4 2 0 2 0 0 0
..............................................................................TCCCTGAGACCTTAACTTGTG............................................................................................................... 21 1 3 1.33 4 3 0 1 0 0 0
..............................................................................TCCCTGAGACCCTAACTTTT................................................................................................................ 20 1 3 1.33 4 2 0 2 0 0 0
..............................................................................TCCCTGAGACCCTCACTTGCGA.............................................................................................................. 22 2 3 1.33 4 3 0 1 0 0 0
..............................................................................TCCCTGAGACTCTAACTTGTG............................................................................................................... 21 1 3 1.33 4 3 0 1 0 0 0
..............................................................................TCCCTGAGACGCTAACTGGTGA.............................................................................................................. 22 2 3 1.33 4 3 0 1 0 0 0
..............................................................................TCCCTGAGACCCTATCTTGT................................................................................................................ 20 1 3 1.33 4 4 0 0 0 0 0
..............................................................................CCCCTGAGACCCTAACTTGCGA.............................................................................................................. 22 2 3 1.33 4 3 0 1 0 0 0
..............................................................................TCACTGAGACCCTAACTGGTGA.............................................................................................................. 22 2 3 1.33 4 1 0 3 0 0 0
..............................................................................TCCCTGAGTCCCTAACCTGTGA.............................................................................................................. 22 2 3 1.33 4 4 0 0 0 0 0
..............................................................................TCAATGAGACCCTAACTTGTGA.............................................................................................................. 22 2 3 1.33 4 3 0 1 0 0 0
..............................................................................TCCCTGAGACCCTAACTAGTG............................................................................................................... 21 1 3 1.33 4 3 0 1 0 0 0
...............................................................................TCCTGAGACCCTAACTTGTGA.............................................................................................................. 21 1 3 1.33 4 4 0 0 0 0 0
..............................................................................TCCCTGAGACCCAAACTTGTGA.............................................................................................................. 22 1 3 1.33 4 2 0 2 0 0 0
................................................................................CCTGAGACCCTAACTTGTGT.............................................................................................................. 20 1 3 1.33 4 3 0 1 0 0 0
..............................................................................TGCCTGAGAACCTAACTTGTGA.............................................................................................................. 22 2 3 1.33 4 4 0 0 0 0 0
..............................................................................TCCATGAGACCCTAACTTGTG............................................................................................................... 21 1 3 1.33 4 2 0 2 0 0 0
..............................................................................TCCCTAAGACCCTAACTTGT................................................................................................................ 20 1 3 1.33 4 0 0 4 0 0 0
..............................................................................CCCCTGAGACCCTAACTTGT................................................................................................................ 20 1 3 1.33 4 2 0 2 0 0 0
..............................................................................TCCCTGGGACCCTAACTTGT................................................................................................................ 20 1 3 1.33 4 2 0 2 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTGACA............................................................................................................ 24 1 3 1.33 4 1 3 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGG................................................................................................................ 20 1 3 1.33 4 3 0 1 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTGTT............................................................................................................. 23 2 3 1.33 4 1 0 1 2 0 0
..............................................................................TCCCTGAGACCCTAACTCGT................................................................................................................ 20 1 3 1.33 4 2 0 2 0 0 0
..............................................................................TCCCTGAGACACTAACTTGTGT.............................................................................................................. 22 2 3 1.33 4 3 0 1 0 0 0
..............................................................................TCCGTGAGACCCTAACTTGTG............................................................................................................... 21 1 3 1.33 4 4 0 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTTCTGC.............................................................................................................. 22 2 3 1.33 4 3 0 1 0 0 0
..............................................................................TCCCTGAGAGCCTAACTGGTGA.............................................................................................................. 22 2 3 1.33 4 4 0 0 0 0 0
..............................................................................TCCCTGAGACCCTAACCTGT................................................................................................................ 20 1 3 1.33 4 2 0 2 0 0 0
...............................................................................CCCTGAGATCCTAACTTGTGA.............................................................................................................. 21 1 3 1.33 4 0 4 0 0 0 0
..............................................................................TTCCTGAGACCCTAACTTGTG............................................................................................................... 21 1 3 1.33 4 2 1 1 0 0 0
..............................................................................TCCCTGAGTCCCTAACTGGT................................................................................................................ 20 2 3 1.00 3 3 0 0 0 0 0
..............................................................................TCCATGAGAACCTAACTTGTGA.............................................................................................................. 22 2 3 1.00 3 3 0 0 0 0 0
..............................................................................TCCCGGAAACCCTAACTTGTGA.............................................................................................................. 22 2 3 1.00 3 3 0 0 0 0 0
..............................................................................TAACTGAGACCCTAACTTGTG............................................................................................................... 21 2 3 1.00 3 2 0 1 0 0 0
..............................................................................TCCCTGAGACCCTAACCGGTGA.............................................................................................................. 22 2 3 1.00 3 3 0 0 0 0 0
..............................................................................TCCCTGTGACCCTAACTTGTGT.............................................................................................................. 22 2 3 1.00 3 3 0 0 0 0 0
..............................................................................TCCCAGAGACCCTAACTGGTGA.............................................................................................................. 22 2 3 1.00 3 3 0 0 0 0 0
..............................................................................TCCCGGAGACCCTAACTTGTGT.............................................................................................................. 22 2 3 1.00 3 3 0 0 0 0 0
..............................................................................TCCCTGAGTCCCTAACTTGTT............................................................................................................... 21 2 3 1.00 3 3 0 0 0 0 0
..............................................................................ACCCTGAGACCCTAACTCGTGA.............................................................................................................. 22 2 3 1.00 3 3 0 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTTTCGA.............................................................................................................. 22 2 3 1.00 3 2 0 1 0 0 0
..............................................................................TCACTGACACCCTAACTTGTGA.............................................................................................................. 22 2 3 1.00 3 2 0 1 0 0 0
..............................................................................TCCCGGAGACCCTAACTTGTG............................................................................................................... 21 1 3 1.00 3 2 0 1 0 0 0
..............................................................................TCCGGGAGACCCTAACTTGTGA.............................................................................................................. 22 2 3 1.00 3 3 0 0 0 0 0
..............................................................................TCCCTGCGACCCTAACTTGTGC.............................................................................................................. 22 2 3 1.00 3 3 0 0 0 0 0
.............................................................................GTCCCTGAGACCCTAACTTGTG............................................................................................................... 22 1 3 1.00 3 0 3 0 0 0 0
..............................................................................TCCCTGAGACGCTAACTTGTG............................................................................................................... 21 1 3 1.00 3 3 0 0 0 0 0
..............................................................................TACCTGAGACCCTAAATTGTGA.............................................................................................................. 22 2 3 1.00 3 2 0 1 0 0 0
..............................................................................TCCCTGAGAGCCTAACTTGTGC.............................................................................................................. 22 2 3 1.00 3 2 0 1 0 0 0
..............................................................................ACCCGGAGACCCTAACTTGTGA.............................................................................................................. 22 2 3 1.00 3 3 0 0 0 0 0
..............................................................................TCCCTGCGACCCTAACTTGTCA.............................................................................................................. 22 2 3 1.00 3 3 0 0 0 0 0
..............................................................................TCCCTGAGACCCTACCTTG................................................................................................................. 19 1 3 1.00 3 3 0 0 0 0 0
..............................................................................TCCCTGAGCCCCTACCTTGTGA.............................................................................................................. 22 2 3 1.00 3 3 0 0 0 0 0
..............................................................................TCCATGAGACCCTAACATGTGA.............................................................................................................. 22 2 3 1.00 3 3 0 0 0 0 0
..............................................................................GCCCTGAGACCCTAACTGGTGA.............................................................................................................. 22 2 3 1.00 3 3 0 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTGGTTA.............................................................................................................. 22 2 3 1.00 3 2 0 1 0 0 0
..............................................................................TCGCTGAGACCCTAGCTGGTGA.............................................................................................................. 22 3 3 1.00 3 3 0 0 0 0 0
..............................................................................TCCCTGAGACCCTCACTTGGGA.............................................................................................................. 22 2 3 1.00 3 3 0 0 0 0 0
..............................................................................TCCCTGGGGCCCTAACTTGTGA.............................................................................................................. 22 2 3 1.00 3 3 0 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTT.................................................................................................................. 18 0 3 1.00 3 1 1 1 0 0 0
..............................................................................TCCCTGAGACACTAACTTGGGA.............................................................................................................. 22 2 3 1.00 3 2 0 1 0 0 0
..............................................................................TCCCTGGGACCCTGACTTGTGA.............................................................................................................. 22 2 3 1.00 3 3 0 0 0 0 0
................................................................................ACTGAGACCCTAACTTGTGA.............................................................................................................. 20 1 3 1.00 3 3 0 0 0 0 0
..............................................................................TCCCTGAGAGCCTAACTTGTGT.............................................................................................................. 22 2 3 1.00 3 3 0 0 0 0 0
..............................................................................TCGCTGAGACCCTAACTGGTGA.............................................................................................................. 22 2 3 1.00 3 3 0 0 0 0 0
....................................................................................................................CACAAGTTTTGATCTCCGGTAT........................................................................ 22 0 3 1.00 3 0 1 0 2 0 0
..............................................................................TCCCTGAGACCCTATCTTGTGC.............................................................................................................. 22 2 3 1.00 3 3 0 0 0 0 0
..............................................................................TCCCTGAGACCCTATCTTGTG............................................................................................................... 21 1 3 1.00 3 2 0 1 0 0 0
..............................................................................TCCCTGAGACCCTCACTTCTGA.............................................................................................................. 22 2 3 1.00 3 2 0 1 0 0 0
..............................................................................TGCCTGAGACCCTAACTTGTG............................................................................................................... 21 1 3 1.00 3 2 0 1 0 0 0
..............................................................................TCGCTGAGAGCCTAACTTGTGA.............................................................................................................. 22 2 3 1.00 3 3 0 0 0 0 0
..............................................................................TCCCAGAGACCCTAACTTGTTA.............................................................................................................. 22 2 3 1.00 3 3 0 0 0 0 0
..............................................................................TCCCTGACACCCTAACTTCTGA.............................................................................................................. 22 2 3 1.00 3 3 0 0 0 0 0
..............................................................................TCCCTGAGAGCCTAACTTGTTA.............................................................................................................. 22 2 3 1.00 3 2 0 1 0 0 0
..............................................................................TCACTGAGACCCTTACTTGTGA.............................................................................................................. 22 2 3 1.00 3 2 0 1 0 0 0
...............................................................................CCCTGAGACCCTAACTTGA................................................................................................................ 19 1 3 1.00 3 0 3 0 0 0 0
..............................................................................TCCCTGGGACCCTAACTTGTGT.............................................................................................................. 22 2 3 1.00 3 3 0 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTGTC............................................................................................................. 23 1 3 1.00 3 3 0 0 0 0 0
......................................................................................................................CAAGTTTTGATCTCCGGTAT........................................................................ 20 0 3 1.00 3 0 3 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTTTTGT.............................................................................................................. 22 2 3 1.00 3 3 0 0 0 0 0
..............................................................................TCCCTGAGACCCTAATTTGTG............................................................................................................... 21 1 3 1.00 3 0 1 2 0 0 0
..............................................................................TCCCTGACACCCTACCTTGT................................................................................................................ 20 2 3 1.00 3 2 0 1 0 0 0
..............................................................................TCACTGAGAACCTAACTTGTGA.............................................................................................................. 22 2 3 1.00 3 2 0 1 0 0 0
..............................................................................TCCCTTAGACCCTAACTTGTG............................................................................................................... 21 1 3 1.00 3 1 2 0 0 0 0
..............................................................................TCACTGAGACCCTAACTTCTGA.............................................................................................................. 22 2 3 1.00 3 3 0 0 0 0 0
..............................................................................TCCCTGAGACCCTAACCTGCG............................................................................................................... 21 2 3 1.00 3 2 0 1 0 0 0
..............................................................................TTCCTGAGACCCTAACTTGT................................................................................................................ 20 1 3 1.00 3 3 0 0 0 0 0
..............................................................................TACCTGAGACCCTAACTTGCGA.............................................................................................................. 22 2 3 1.00 3 2 0 1 0 0 0
..............................................................................TCCCTGAGACCCTCACTGGTGA.............................................................................................................. 22 2 3 1.00 3 2 0 1 0 0 0
..............................................................................TCCCTGAGACCCTCCCTTGTGA.............................................................................................................. 22 2 3 1.00 3 2 0 1 0 0 0
..............................................................................TCACTGTGACCCTAAATTGTGA.............................................................................................................. 22 3 3 1.00 3 1 0 2 0 0 0
..............................................................................TCGCTGAGTCCCTAACTTGTGA.............................................................................................................. 22 2 3 1.00 3 3 0 0 0 0 0
..............................................................................TCCCTGGGGCCCTAACTTGTGT.............................................................................................................. 22 3 3 1.00 3 3 0 0 0 0 0
..............................................................................TCCCTGCGACCCTAACCTGTG............................................................................................................... 21 2 3 1.00 3 2 0 1 0 0 0
..............................................................................ACCCTGAGACCCTAACTTGCGA.............................................................................................................. 22 2 3 1.00 3 1 0 2 0 0 0
..............................................................................TCCCTGAGGCACTAACTTGTGA.............................................................................................................. 22 2 3 1.00 3 3 0 0 0 0 0
..............................................................................GCCCTGAGACCCTAACTTGT................................................................................................................ 20 1 3 1.00 3 2 0 1 0 0 0
..............................................................................TCCCTGCGACCCTAACCTGCGA.............................................................................................................. 22 3 3 1.00 3 3 0 0 0 0 0

Anti-sense strand reads

TTTGCAGGCTCATAGGTTCATAGGCTCATCAGGGCTCATAACCATACTCACTGTACACGTTTACAAACATACCGACTAAGGGACTCTGGGATTGAACACTGAAAATTATGGTCAAAGTGTTCAAAACTAGAGGCCATAACCTGCGTTTGAACGACTACAATATGTTTTTTTTTCGTTTTTTCTTTTCGTTTTTTACGTTTTTGACTTACT

*********************************************************((((((....(((((..((.((((....(((((((((...............)))))))))....)))).)).)))))..))))))....*************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V057

head

 M042

female body

 V111

male body
....................................................................................................................GTGTTCAATACCAGAGGCCAT......................................................................... 21 2 3 0.33 1 1 0 0
................................................................................GGACTCTGGGATTGAACACT.............................................................................................................. 20 0 3 0.33 1 0 1 0
..................................................................................................CTGAAAAGTATGGTGGAAGTG........................................................................................... 21 3 4 0.25 1 0 0 1
...................................................................................................................AGTGTTCAATGCTAGAGGCCCT......................................................................... 22 3 6 0.17 1 1 0 0
...........................................................................CTAAGGGACTCTGGCAAG..................................................................................................................... 18 3 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droPer2 scaffold_1:5116545-5116754 + dpe-mir-125-1 Known_mirbase AAACGTCCGAGTATCCAAG--TATCCGAGTAGTCC----------CGAGTATTGGTATG---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTA-TACAAAA---------------------A---AAA-------AGCAAAAAAGAAAAGCAAAAAATGCAAAAACTGAATGA------------------
dp5 4_group3:3635961-3636170 + dps-mir-125 Known_mirbase AAACGTCCGAGTATCCAAG--TATCCGAGTAGTCC----------CGAGTATTGGTATG---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTA-TACAAAA---------------------A--AAAA-------AGCAAAAAAGAAAAGC-AAAAATGCAAAAACTGAATGA------------------
droWil2 scf2_1100000004521:11623326-11623462 + dwi-mir-125 Known_mirbase -------------------------------------------------TATTGGTATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTGGCAAAAAG---------------------C---TA--------------------------------------------A------------------A
droVir3 scaffold_12963:18451611-18451809 + dvi-mir-125 Known_mirbase ATATATATTTATATATATG--TATATATATATTAC-------------ACATTGGTATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAACAAAAAAACAAAAACAATTACAAAAA--AATA------AG-A--------AA----------------AC-------------------------
droMoj3 scaffold_6500:6184269-6184398 - dmo-mir-125 Known_mirbase --------------------------------------------------ATTGGTATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAAAAA--------------------------------------------------------------------------------------------
droGri2 scaffold_3792:426-621 + dgr-mir-125-2 Known_mirbase AATCGATCTCATATGAAA-TTC-AC------------TGCATATTTACACATTGGTATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAAAAAA-AAACAAAAACA------------ATAA-------AACAAAAA------GC---------AA---------A------------------A
droAna3 scaffold_12916:2379439-2379607 + dan-mir-125 Known_mirbase A------------------TGCATCCG-------CCGGGCGCATGTAAATATTGGTATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAATACAAAA---------------------AAGATAA-------AGCAAA--------------------------------------------------
droBip1 scf7180000396430:325132-325303 + A------------------TGCATCCG-------CCGGGCGCATGTAAATATTGGTATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAATAAAAAA---------------------G--ATAA-------AGCAAA--CGA-------------------------GA------------------
droKik1 scf7180000302401:71472-71634 - -------------------------------------------------TATTGGCATTGATAGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGCAAAAAA---------------------A--GTAA-------GATAAAAA------GC---------AAGAGCTGCGAGA------------------
droFic1 scf7180000452427:734-877 - A-----------------------------------------------ATATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAATAAAAAA--------------------------AC-------GGCAAAAA------------------------------------------------
droEle1 scf7180000491338:2439739-2439926 + A------------------TGCAAC----------CGGGCATATGTAAATATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAAAAAA---------------------A---GA-AAACCCAGGCAAAAACAATA-------------ACAACTGATCGA------------------
droRho1 scf7180000780227:12855-13052 + AAGCCTTGGA-AATGTAAATGCATC----------CGGGCATATGTAAATATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAAAAAA--A------------------A---CA-A-----AGGCAAAAGCAAAA----------------ACTGATCGA------------------
droBia1 scf7180000302422:5215211-5215391 - A--CTTTTG--------AATGCATC----------CGGGCATATGTAAATATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAAAAAA---------------------A---CA-A-----AGGCAAGACCAAAA-GC----------------------------------------
droTak1 scf7180000415867:747194-747374 + A------------------TGCAAC----------CGGGCATATGTAAATATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAAAAAA---------------------A---CA-A-----AGGCAAAAACCAAA-GCTAACCATG--------------------------------
droEug1 scf7180000409447:414912-415110 + --------------------GCAAC----------CGGGCATATGTAAATATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAATGAAAAATAA------------------A---CA-A-----AGGCAAAAACAAAA----------------GCTGATGGAGGGCAGCAATAAATGGAA
dm3 chr2L:18472299-18472448 + dme-mir-125 Known_mirbase A----------------------------------------------AATATTGGCATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAAAAAA-------------------------TAA-------GGCAAAAACGAA--------------------------------------------
droSim2 2l:18033279-18033464 + dsi-mir-125 Known_mirbase GAATGCCTAAGTATGTAAATGCAAC----------CGGGCGTATGTAAATATTGGCATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAAAAAA-------------------------TAA-------GGCAAAGGCGAA--------------------------------------------
droSec2 scaffold_7:2098250-2098400 + dse-mir-125 Known_mirbase A----------------------------------------------AATATTGGCATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAAAAAA---------------------A---TAA-------GGCAAAGACGAA--------------------------------------------
droYak3 2R:4989098-4989248 + dya-mir-125 Known_mirbase A----------------------------------------------AATATTGGCATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAAAAAA-------------------------TAA-------GGCAAAAAAGAAA-------------------------------------------
droEre2 scaffold_4845:5799079-5799256 - der-mir-125 Known_mirbase A---------GTATGTAAATGCAAC----------CGGGCATATGTAAATATTGGCATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAAAAAA-------------------------TAA-------GGCAAAAACAAAA-------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
AAACGTCCGAGTATCCAAG--TATCCGAGTAGTCC----------CGAGTATTGGTATG---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTA-TACAAAA---------------------A---AAA-------AGCAAAAAAGAAAAGCAAAAAATGCAAAAACTGAATGA------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.............................................................................................TCCCTGAGACCCTAACTTGTGA................................................................................................................................................................22310471.3331414199292896611956560
.............................................................................................TCCCTGAGACCCTAACTTGTG.................................................................................................................................................................2132249.6767490222202089235286
.............................................................................................TCCCTGAGACCCTAACTTGT..................................................................................................................................................................203857.332572020301017129755
..............................................................................................CCCTGAGACCCTAACTTGTGA................................................................................................................................................................213281.00843082701060
.............................................................................................TCCCTGAGACCCTAACTTGTGAA...............................................................................................................................................................233125.0037501730901075
.............................................................................................TCCCTGAGACCCTAACTTGTGT................................................................................................................................................................223116.333490440952019
...............................................................................................CCTGAGACCCTAACTTGTGA................................................................................................................................................................20372.00216046094760
.............................................................................................TCCCTGAGACCCTAACTTGTGC................................................................................................................................................................22367.002010100611300
..............................................................................................CCCTGAGACCCTAACTTGTG.................................................................................................................................................................20359.3317801770100
....................................................................................................................................ACAAGTTTTGATCTCCGGTAT..........................................................................................................................21342.331270200236321
.............................................................................................TCCCTGAGACCCTAACTTG...................................................................................................................................................................19335.67107031034420
.............................................................................................TCCCTGAGACCCTAACTTGTGACT..............................................................................................................................................................24327.6783048013220
.............................................................................................TCCCTGAGACCCTAACTTGTGG................................................................................................................................................................22321.336403407221
...............................................................................................CCTGAGACCCTAACTTGTG.................................................................................................................................................................19314.674407022150
.............................................................................................TCCCTGAGACCCTAACTTGTGAC...............................................................................................................................................................23314.334322803100
................................................................................................CTGAGACCCTAACTTGTGA................................................................................................................................................................19314.0042013014105
..................................................................................................................................TCACAAGTTTTGATCTCCGGTAT..........................................................................................................................23312.33370904186
..............................................................................................CCCTGAGACCCTAACTTGT..................................................................................................................................................................1936.67200200000
.............................................................................................TCCCTGAGACCCTAACTTGA..................................................................................................................................................................2036.67200150122
...............................................................................................CCTGAGACCCTAACTTGT..................................................................................................................................................................1836.3319010990
.............................................................................................TCCCTGAGACCCTAACTTGTGAT...............................................................................................................................................................2335.6717050390
.............................................................................................TCCCTGAGACCCTAACTTGTGACTT.............................................................................................................................................................2535.67170140210
.............................................................................................TCCCTGAGACCCTAACTTGTT.................................................................................................................................................................2135.33160003130
.............................................................................................TCCCTGAGACCCTAACTTGC..................................................................................................................................................................2034.6714000680
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTT............................................................................................................................................................2634.67140110210
.................................................................................................TGAGACCCTAACTTGTGA................................................................................................................................................................1834.0012090210
............................................................................................TTCCCTGAGACCCTAACTTGTGA................................................................................................................................................................2333.67110110000
..............................................................................................CCCTGAGACCCTAACTTGTGAA...............................................................................................................................................................2233.33100100000
.............................................................................................TCCCTGAGACCCTAACTTGTC.................................................................................................................................................................2133.3310010360
.................................................................................................................................TTCACAAGTTTTGATCTCCGGTAT..........................................................................................................................2432.678010043
.............................................................................................TCCCTGAGACCCTAACTTGTGAAA..............................................................................................................................................................2432.337020320
..............................................................................................CCCTGAGACCCTAACTTGTGACT..............................................................................................................................................................2332.337070000
................................................................................................CTGAGACCCTAACTTGTG.................................................................................................................................................................1832.337020122
.............................................................................................TCCCTGAGACCCTAACTTGTA.................................................................................................................................................................2132.337030220
.............................................................................................TCCCTGAGACCCTAACTTGTTC................................................................................................................................................................2232.006000150
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTTT...........................................................................................................................................................2732.006040110
.............................................................................................TCCCTGAGACCCTAACTTGTGAG...............................................................................................................................................................2332.006010131
....................................................................................................................................ACAAGTTTTGATCTCCGGTA...........................................................................................................................2031.675020030
...............................................................................................CCTGAGACCCTAACTTGTGT................................................................................................................................................................2031.334000130
.............................................................................................TCCCTGAGACCCTAACTTGTGACA..............................................................................................................................................................2431.334030010
.............................................................................................TCCCTGAGACCCTAACTTGG..................................................................................................................................................................2031.334000130
.............................................................................................TCCCTGAGACCCTAACTTGTGTT...............................................................................................................................................................2331.334000112
.............................................................................................TCCCTGAGACCCTAACTT....................................................................................................................................................................1831.003010110
...................................................................................................................................CACAAGTTTTGATCTCCGGTAT..........................................................................................................................2231.003010002
..............................................................................................CCCTGAGACCCTAACTTGA..................................................................................................................................................................1931.003030000
.....................................................................................................................................CAAGTTTTGATCTCCGGTAT..........................................................................................................................2031.003030000
dp5
AAACGTCCGAGTATCCAAG--TATCCGAGTAGTCC----------CGAGTATTGGTATG---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTA-TACAAAA---------------------A--AAAA-------AGCAAAAAAGAAAAGC-AAAAATGCAAAAACTGAATGA------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.............................................................................................TCCCTGAGACCCTAACTTGTGA................................................................................................................................................................221102870.001028708642721529352137550102310749139
.............................................................................................TCCCTGAGACCCTAACTTGTG.................................................................................................................................................................21127961.002796141571819694022462398492
..............................................................................................CCCTGAGACCCTAACTTGTGA................................................................................................................................................................2115340.00534015263072040000
.............................................................................................TCCCTGAGACCCTAACTTGT..................................................................................................................................................................2013864.0038640177819080109184011
.............................................................................................TCCCTGAGACCCTAACTTGTGAA...............................................................................................................................................................2311871.00187111021177006410130
..............................................................................................CCCTGAGACCCTAACTTGTG.................................................................................................................................................................2011471.00147101450019011000
.............................................................................................TCCCTGAGACCCTAACTTG...................................................................................................................................................................191958.00958144504790280230
.............................................................................................TCCCTGAGACCCTAACTTGTGT................................................................................................................................................................221771.0077103480281012022000
.............................................................................................TCCCTGAGACCCTAACTTGTGACT..............................................................................................................................................................241484.0048403250148091010
...............................................................................................CCTGAGACCCTAACTTGTGA................................................................................................................................................................201371.00371025006704410000
.............................................................................................TCCCTGAGACCCTAACTTGTGAC...............................................................................................................................................................231362.0036202120147030000
.............................................................................................TCCCTGAGACCCTAACTTGTGC................................................................................................................................................................221253.0025302301760459000
....................................................................................................................................ACAAGTTTTGATCTCCGGTAT..........................................................................................................................211245.0024511700903028007
..............................................................................................CCCTGAGACCCTAACTTGT..................................................................................................................................................................191160.00160015703000000
................................................................................................CTGAGACCCTAACTTGTGA................................................................................................................................................................191133.001330107014083001
.............................................................................................TCCCTGAGACCCTAACTTGC..................................................................................................................................................................201128.00128030118070000
.............................................................................................TCCCTGAGACCCTAACTTGTA.................................................................................................................................................................211109.00109070100020000
..............................................................................................CCCTGAGACCCTAACTTGTGAA...............................................................................................................................................................221103.00103010002000100
.............................................................................................TCCCTGAGACCCTAACTTGTGG................................................................................................................................................................22196.0096053030085000
...............................................................................................CCTGAGACCCTAACTTGTG.................................................................................................................................................................19190.00900570150144000
.............................................................................................TCCCTGAGACCCTAACTTGTGAT...............................................................................................................................................................23168.0068046015052000
.............................................................................................TCCCTGAGACCCTAACTTGTGACTT.............................................................................................................................................................25168.006805906021000
............................................................................................TTCCCTGAGACCCTAACTTGTGA................................................................................................................................................................23165.006505906000000
..................................................................................................................................TCACAAGTTTTGATCTCCGGTAT..........................................................................................................................23157.005704203028020
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTT............................................................................................................................................................26154.0054042011001000
.............................................................................................TCCCTGAGACCCTAACTTGTT.................................................................................................................................................................21150.0050013029062000
..............................................................................................CCCTGAGACCCTAACTTG...................................................................................................................................................................18146.004604402000000
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTTT...........................................................................................................................................................27144.004403904010000
.................................................................................................TGAGACCCTAACTTGTGA................................................................................................................................................................18142.004203901000110
..............................................................................................CCCTGAGACCCTAACTTGTGACT..............................................................................................................................................................23140.004003901000000
.............................................................................................TCCCTGAGACCCTAACTTGA..................................................................................................................................................................20139.0039018018020100
.............................................................................................TCCCTGAGACCCTAACTTGTGACC..............................................................................................................................................................24136.003600036000000
..............................................................................................CCCTGAGACCCTAACTTGTGT................................................................................................................................................................21136.003603501000000
................................................................................................CTGAGACCCTAACTTGTG.................................................................................................................................................................18136.0036024010020000
..............................................................................................CCCTGAGACCCTAACTTGTGAC...............................................................................................................................................................22132.003202704010000
.............................................................................................TCCCTGAGACCCTAACTT....................................................................................................................................................................18127.002702401020000
.............................................................................................TCCCTGAGACCCTAACTTGTGAAA..............................................................................................................................................................24122.002208010000040
.............................................................................................TCCCTGAGACCCTAACTTGTGAG...............................................................................................................................................................23122.002201502050000
....................................................................................................................................ACAAGTTTTGATCTCCGGTATT.........................................................................................................................22120.002001504010000
.....................................................................................................................................CAAGTTTTGATCTCCGGTAT..........................................................................................................................20119.001901800000001
.............................................................................................TCCCTGAGACCCTAACTTGTC.................................................................................................................................................................21117.001703010031000
.................................................................................................................................TTCACAAGTTTTGATCTCCGGTAT..........................................................................................................................24115.001501500000000
.............................................................................................TCCCTGAGACCCTAACTTGTGTT...............................................................................................................................................................23115.001501201020000
..................................................................................................................................TCACAAGTTTTGATCTCCGGTA...........................................................................................................................22114.001401102010000
............................................................................................TTCCCTGAGACCCTAACTTGTG.................................................................................................................................................................22113.001301102000000
...............................................................................................CCTGAGACCCTAACTTGT..................................................................................................................................................................18112.00120501060000
....................................................................................................................................ACAAGTTTTGATCTCCGGTA...........................................................................................................................20111.00110900010001
...................................................................................................................................CACAAGTTTTGATCTCCGGTAT..........................................................................................................................2219.0090701001000
...............................................................................................CCTGAGACCCTAACTTGTGAA...............................................................................................................................................................2119.0090504000000
.............................................................................................TCCCTGAGACCCTAACTTGTTC................................................................................................................................................................2218.0080006020000
..............................................................................................CCCTGAGACCCTAACTTGTGG................................................................................................................................................................2117.0070700000000
..............................................................................................CCCTGAGACCCTAACTTGTGAT...............................................................................................................................................................2217.0070700000000
..................................................................................................................................TCACAAGTTTTGATCTCCGGT............................................................................................................................2116.0060600000000
.............................................................................................TCCCTGAGACCCTAACTTGTGTA...............................................................................................................................................................2316.0060204000000
...........................................................................................ATTCCCTGAGACCCTAACTTGTGA................................................................................................................................................................2416.0060600000000
....................................................................................................................................ACAAGTTTTGATCTCCGGTATA.........................................................................................................................2215.0050301001000
....................................................................................................................................ACAAGTTTTGATCTCCGGTAC..........................................................................................................................2115.0050104000000
..............................................................................................CCCTGAGACCCTAACTTGTGC................................................................................................................................................................2115.0050500000000
...........................................................................................ATTCCCTGAGACCCTAACTTGTG.................................................................................................................................................................2315.0050401000000
.............................................................................................TCCCTGAGACCCTAACTTT...................................................................................................................................................................1914.0040300010000
..............................................................................................CCCTGAGACCCTAACTTGTGACTT.............................................................................................................................................................2414.0040400000000
.............................................................................................TCCCTGAGACCCTAACTTGTGCA...............................................................................................................................................................2314.0040003010000
....................................................................................................................................ACAAGTTTTGATCTCCGGT............................................................................................................................1914.0041100020000
...............................................................................................CCTGAGACCCTAACTTGTGT................................................................................................................................................................2013.0030300000000
..............................................................................................CCCTGAGACCCTAACTTGTA.................................................................................................................................................................2013.0030201000000
.....................................................................................................................................CAAGTTTTGATCTCCGGTA...........................................................................................................................1913.0030300000000
.............................................................................................TCCCTGAGACCCTAACTTGTGAAAA.............................................................................................................................................................2513.0030001000020
.............................................................................................TCCCTGAGACCCTAACTTTGA.................................................................................................................................................................2123.0060303000000
.............................................................................................TCCCTGAGACCCTAACTTGTGACA..............................................................................................................................................................2413.0030002000010
..............................................................................................CCCTGAGACCCTAACTTGTGAAA..............................................................................................................................................................2313.0030300000000
droWil2
-------------------------------------------------TATTGGTATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTGGCAAAAAG---------------------C---TA--------------------------------------------A------------------ASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.............................................................................................TCCCTGAGACCCTAACTTGTGA................................................................................................................................................................22168643.0068643559342638126938718756
.............................................................................................TCCCTGAGACCCTAACTTGTG.................................................................................................................................................................21116907.00169079528575256337091
.............................................................................................TCCCTGAGACCCTAACTTGT..................................................................................................................................................................2019209.0092099383073178196
..............................................................................................CCCTGAGACCCTAACTTGTGA................................................................................................................................................................2113633.0036331235860134
.............................................................................................TCCCTGAGACCCTAACTTGTGAA...............................................................................................................................................................2312633.002633115411161417332
....................................................................................................................................ACAAGTTTTGATCTCCGGTAT..........................................................................................................................2111648.00164812661252311223
.............................................................................................TCCCTGAGACCCTAACTTGTGACT..............................................................................................................................................................2411049.0010498211831044
.............................................................................................TCCCTGAGACCCTAACTTGTGG................................................................................................................................................................221938.00938887340017
..............................................................................................CCCTGAGACCCTAACTTGTG.................................................................................................................................................................201765.0076577460012
.............................................................................................TCCCTGAGACCCTAACTTGTGT................................................................................................................................................................221608.00608710751488
.............................................................................................TCCCTGAGACCCTAACTTGTGAC...............................................................................................................................................................231608.006084511391017
.............................................................................................TCCCTGAGACCCTAACTTG...................................................................................................................................................................191555.0055526714820138
.............................................................................................TCCCTGAGACCCTAACTTGTGACTT.............................................................................................................................................................251418.00418357510010
...............................................................................................CCTGAGACCCTAACTTGTGA................................................................................................................................................................201406.0040621173125195
....................................................................................................................................ACAAGTTTTGATCTCCGGTATT.........................................................................................................................221214.00214188141011
..................................................................................................................................TCACAAGTTTTGATCTCCGGTAT..........................................................................................................................231210.00210170222016
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTT............................................................................................................................................................261196.0019615635005
................................................................................................CTGAGACCCTAACTTGTGA................................................................................................................................................................191144.001447966134
...............................................................................................CCTGAGACCCTAACTTGTG.................................................................................................................................................................191127.001278412175
.............................................................................................TCCCTGAGACCCTAACTTGA..................................................................................................................................................................201125.001250634256
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTTT...........................................................................................................................................................271118.0011888190011
..............................................................................................CCCTGAGACCCTAACTTGT..................................................................................................................................................................191110.001101900019
..............................................................................................CCCTGAGACCCTAACTTGTGAA...............................................................................................................................................................22195.0095192002
.............................................................................................TCCCTGAGACCCTAACTTGTGAAA..............................................................................................................................................................24186.0086233211119
.................................................................................................TGAGACCCTAACTTGTGA................................................................................................................................................................18179.00792845006
...............................................................................................CCTGAGACCCTAACTTGT..................................................................................................................................................................18171.0071141065
..................................................................................................................................TCACAAGTTTTGATCTCCGGT............................................................................................................................21163.0063542106
.............................................................................................TCCCTGAGACCCTAACTTGTGAT...............................................................................................................................................................23159.00593270029
.............................................................................................TCCCTGAGACCCTAACTTGTGC................................................................................................................................................................22150.00501160132
............................................................................................TTCCCTGAGACCCTAACTTGTGA................................................................................................................................................................23146.0046046000
....................................................................................................................................ACAAGTTTTGATCTCCGGTA...........................................................................................................................20145.0045364005
.............................................................................................TCCCTGAGACCCTAACTTGTA.................................................................................................................................................................21144.00443130028
..................................................................................................................................TCACAAGTTTTGATCTCCGGTA...........................................................................................................................22141.0041314006
.............................................................................................TCCCTGAGACCCTAACTTGTGACC..............................................................................................................................................................24139.0039372000
....................................................................................................................................ACAAGTTTTGATCTCCGGTAC..........................................................................................................................21136.0036350001
................................................................................................CTGAGACCCTAACTTGTG.................................................................................................................................................................18129.00290180011
.............................................................................................TCCCTGAGACCCTAACTTGTGAG...............................................................................................................................................................23124.0024910005
.............................................................................................TCCCTGAGACCCTAACTT....................................................................................................................................................................18123.0023081014
.............................................................................................TCCCTGAGACCCTAACTTGTT.................................................................................................................................................................21123.0023191012
...................................................................................................................................CACAAGTTTTGATCTCCGGTAT..........................................................................................................................22123.0023175001
..............................................................................................CCCTGAGACCCTAACTTGTGACT..............................................................................................................................................................23118.0018215010
..............................................................................................CCCTGAGACCCTAACTTGTGAC...............................................................................................................................................................22117.0017214100
.....................................................................................................................................CAAGTTTTGATCTCCGGTAT..........................................................................................................................20117.0017314000
.............................................................................................TCCCTGAGACCCTAACTTGC..................................................................................................................................................................20116.0016320011
....................................................................................................................................ACAAGTTTTGATCTCCGGTATA.........................................................................................................................22115.0015113001
.............................................................................................TCCCTGAGACCCTAACTTGTGAAC..............................................................................................................................................................24113.0013120010
..............................................................................................CCCTGAGACCCTAACTTG...................................................................................................................................................................18113.0013013000
.............................................................................................TCCCTGAGACCCTAACTTGTC.................................................................................................................................................................21112.001233006
................................................................................................................................TTTCACAAGTTTTGATCTCCGGTAT..........................................................................................................................25111.001192000
...............................................................................................CCTGAGACCCTAACTTGTGAA...............................................................................................................................................................21110.001016111
.................................................................................................................................TTCACAAGTTTTGATCTCCGGTAT..........................................................................................................................24110.0010100000
...............................................................................................CCTGAGACCCTAACTTGTGACT..............................................................................................................................................................2219.00932004
................................................................................................................................TTTCACAAGTTTTGATCTCCGGT............................................................................................................................2319.00990000
.............................................................................................TCCCTGAGACCCTAACTTGTGACG..............................................................................................................................................................2418.00880000
.............................................................................................TCCCTGAGACCCTAACTTGTGACA..............................................................................................................................................................2417.00722003
....................................................................................................................................ACAAGTTTTGATCTCCGGTATC.........................................................................................................................2217.00741101
....................................................................................................................................ACAAGTTTTGATCTCCGG.............................................................................................................................1817.00751001
.............................................................................................TCCCTGAGACCCTAACTGA...................................................................................................................................................................1917.00703004
.................................................................................................TGAGACCCTAACTTGTGAA...............................................................................................................................................................1916.00633000
........................................................................GCAAATGTTTGTATGGCTGATT.....................................................................................................................................................................................2216.00631002
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTTTA..........................................................................................................................................................2816.00642000
.............................................................................................TCCCTGAGACCCTAACTTGG..................................................................................................................................................................2016.00650001
......................................................................................................................................AAGTTTTGATCTCCGGTAT..........................................................................................................................1916.00613002
.............................................................................................TCCCTGAGACCCTAACTG....................................................................................................................................................................1816.00601005
..................................................................................................................................TCACAAGTTTTGATCTCCGGC............................................................................................................................2116.00660000
..............................................................................................CCCTGAGACCCTAACTTGTGAT...............................................................................................................................................................2215.00505000
.............................................................................................TCCCTGAGACCCTAACTTGTCC................................................................................................................................................................2215.00511003
..............................................................................................CCCTGAGACCCTAACTTGA..................................................................................................................................................................1915.00505000
.............................................................................................TCCCTGAGACCCTAACTTGACT................................................................................................................................................................2215.00550000
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTG............................................................................................................................................................2615.00550000
................................................................................................CTGAGACCCTAACTTGTGACT..............................................................................................................................................................2115.00541000
.......................................................................TGCAAATGTTTGTATGGCTGAT......................................................................................................................................................................................2215.00541000
.......................................................................TGCAAATGTTTGTATGGCTGA.......................................................................................................................................................................................2115.00510004
..................................................................................................................................TCACAAGTTTTGATCTCCGG.............................................................................................................................2014.00431000
............................................................................................TTCCCTGAGACCCTAACTTGTG.................................................................................................................................................................2214.00404000
.............................................................................................TCCCTGAGACCCTAACTTGAA.................................................................................................................................................................2114.00412001
.............................................................................................TCCCTGAGACCCTAACTTTG..................................................................................................................................................................2014.00403001
.............................................................................................TCCCTGAGACCCTAACTTT...................................................................................................................................................................1914.00404000
....................................................................................................................................ACAAGTTTTGATCTCCGGTATCC........................................................................................................................2314.00430001
..............................................................................................CCCTGAGACCCTAACTTGTGT................................................................................................................................................................2114.00404000
..............................................................................................CCCTGAGACCCTAACTTGTGACTTT............................................................................................................................................................2514.00404000
..............................................................................................CCCTGAGACCCTAACTTGTGACTT.............................................................................................................................................................2414.00404000
..............................................................................................CCCTGAGACCCTAACTTGTGG................................................................................................................................................................2114.00422000
.............................................................................................TCCCTGAGACCCTAACTGT...................................................................................................................................................................1914.00400004
.............................................................................................TCCCTGAGACCCTAACTTGTGACTG.............................................................................................................................................................2514.00431000
.............................................................................................TCCCTGAGACCCTAACTTGGA.................................................................................................................................................................2113.00302001
.................................................................................................................................TTCACAAGTTTTGATCTCCGGT............................................................................................................................2213.00330000
....................................................................................................................................ACAAGTTTTGATCTCCGGTAG..........................................................................................................................2113.00330000
..............................................................................................................................AGTTTCACAAGTTTTGATCTCCGGTAT..........................................................................................................................2713.00330000
...............................................................................................CCTGAGACCCTAACTTGA..................................................................................................................................................................1813.00300003
...........................................................................................ATTCCCTGAGACCCTAACTTGTGA................................................................................................................................................................2413.00303000
.............................................................................................TCCCTGAGACCCTAACTTTGA.................................................................................................................................................................2123.00603003
.................................................................................................TGAGACCCTAACTTGTGAC...............................................................................................................................................................1913.00321000
.............................................................................................TCCCTGAGACCCTAACTGTG..................................................................................................................................................................2022.50502003
..................................................................................................................................TCACAAGTTTTGATCTCC...............................................................................................................................1812.00220000
droVir3
ATATATATTTATATATATG--TATATATATATTAC-------------ACATTGGTATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAACAAAAAAACAAAAACAATTACAAAAA--AATA------AG-A--------AA----------------AC-------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.............................................................................................TCCCTGAGACCCTAACTTGTGA................................................................................................................................................................221238775.002387757488025189422340194142151022170515011119178924940761026211142483332121511911921619216821662527203615226150627021196043027571925638631259300000000000000011781710928152615942569528247108994764958510119625881188282
.............................................................................................TCCCTGAGACCCTAACTTGTG.................................................................................................................................................................21134274.003427413528713259229144994145311000283812085101154118661813911316254513016015688180913586311157014530022315100000000000000000119123369326348511152838570397774118618998131
.............................................................................................TCCCTGAGACCCTAACTTGT..................................................................................................................................................................20111405.00114051340136502516148219301942400073740319248984445123412616925231323019352421258483124200004118900000000000000000380015021632402011396141325141916
.............................................................................................TCCCTGAGACCCTAACTTGTGAA...............................................................................................................................................................2315774.00577411813298314162126101041023186305225134563624136221620202662041283393421224125000000000000000000340079220151658623944723746646314117108118140
..............................................................................................CCCTGAGACCCTAACTTGTGA................................................................................................................................................................2114778.00477807459600100000000111236922191804061151971802000011000000000000000003009103000100001000000
....................................................................................................................................ACAAGTTTTGATCTCCGGTAT..........................................................................................................................2112266.00226623829202126551130000643428383816342943341916312774704011203301011454000000000000000005004663461100023117312415418910600000
..............................................................................................CCCTGAGACCCTAACTTGTG.................................................................................................................................................................2011249.0012491312230000000000031011102200000031500000000000000000000000001000000000010000000000
...............................................................................................CCTGAGACCCTAACTTGTGA................................................................................................................................................................2011156.001156332120310231800008234153340231877467181967817533115018000031800000000000000010600931901700027211300000
.............................................................................................TCCCTGAGACCCTAACTTGTGG................................................................................................................................................................2211038.00103818017541001132010001000001030010054120300000000000000000000010120018201100012810788287615000010
.............................................................................................TCCCTGAGACCCTAACTTGTGT................................................................................................................................................................221955.0095543163011561551940004737304349211864610231135502752014000031800000000000000000200114801300000002005621
.............................................................................................TCCCTGAGACCCTAACTTG...................................................................................................................................................................191909.0090939612600035101100042288212911619173220018281318050000450000000000000000019001011120000026301511191401343
.............................................................................................TCCCTGAGACCCTAACTTGTGC................................................................................................................................................................221664.006640070720102001000762352961207410018101121213204200009420000000000000000000094100000000000000000
.............................................................................................TCCCTGAGACCCTAACTTGTGACT..............................................................................................................................................................241657.006574071930010002000041211027113124335210341616923040100020000000000000000015009313231115158617131137510
.............................................................................................TCCCTGAGACCCTAACTTGTGAAA..............................................................................................................................................................241586.005860331000001000101710789131211902311171512314302000200000000000000000211500504637102401181053495364
..................................................................................................................................TCACAAGTTTTGATCTCCGGTAT..........................................................................................................................231417.00417131150155002000017135510620101025610921177300130000218000000000000000000006122030001713101633800100
.............................................................................................TCCCTGAGACCCTAACTTGTGAC...............................................................................................................................................................231378.0037831276800101000000221161914651925011211413621030000210000000000000000010080010001851881001132
................................................................................................CTGAGACCCTAACTTGTGA................................................................................................................................................................191335.00335128501203110000161031313292216162742728123002000026000000000000000000005000000001101000000
....................................................................................................................................ACAAGTTTTGATCTCCGGTATT.........................................................................................................................221242.002424213020300000003102000213100152110000001100000000000001110100340320003228509311800000
.............................................................................................TCCCTGAGACCCTAACTTGTGAT...............................................................................................................................................................231218.00218003601410030000146918136523190001120941003000001000000000000000000001100210000001001202
...............................................................................................CCTGAGACCCTAACTTGTG.................................................................................................................................................................191191.001910358001010000001896685030231208162000000000000000000000000030037600000000000200000
.............................................................................................TCCCTGAGACCCTAACTTGTGACTT.............................................................................................................................................................251178.0017820141200001000000164210461141401100101351105000000000000000000000001000000000032230001020
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTT............................................................................................................................................................261156.001565615001000000001361634311120112271391401000002000000000000000001001001000032013500001
.............................................................................................TCCCTGAGACCCTAACTTGTC.................................................................................................................................................................211149.0014900180114200100002302441055002007961206000001000000000000000000000151100000000000000000
..............................................................................................CCCTGAGACCCTAACTTGT..................................................................................................................................................................191136.00136001320000000000001000100000000020000000000000000000000000000000000000000000000000
............................................................................................TTCCCTGAGACCCTAACTTGTGA................................................................................................................................................................231114.0011400910000000000033020102302001101400000000000000000000000000000000000000000000000
.................................................................................................TGAGACCCTAACTTGTGA................................................................................................................................................................181109.0010927350010000000030232111302211363701000001000000000000000001004100000053021400000
.............................................................................................TCCCTGAGACCCTAACTTGTCC................................................................................................................................................................22192.00920060000102000020011014442111064813070000010000000000000000000003000000000100000000
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTTT...........................................................................................................................................................27190.009011150000000000011222200780100151241000000010000000000000000001000000000002000100001
..............................................................................................CCCTGAGACCCTAACTTGTGAA...............................................................................................................................................................22184.008400790000000000001100001100000000000000000000000000000000000000000001000000000000
.............................................................................................TCCCTGAGACCCTAACTT....................................................................................................................................................................18175.0075111900000000000824113308601000131001000000000000000000000000000101000000000000000
.............................................................................................TCCCTGAGACCCTAACTTGTGACC..............................................................................................................................................................24173.00731213300010000000200000012000005221004000000000000000000000001000000000002106302100
.............................................................................................TCCCTGAGACCCTAACTTGA..................................................................................................................................................................20171.0071002100000010000121201045010221172100000000000000000000000000002100300000000001000
...................................................................................................................................CACAAGTTTTGATCTCCGGTAT..........................................................................................................................22158.005822500010000000311100000110002002000000020000000000000000000014021000434110300010
...............................................................................................CCTGAGACCCTAACTTGT..................................................................................................................................................................18155.00550080000011000050232115300210221203000000000000000000000000009100000000000000000
................................................................................................CTGAGACCCTAACTTGTG.................................................................................................................................................................18153.005300160000100000041343005100000471100000000000000000000000000002000000000000000000
.............................................................................................TCCCTGAGACCCTAACTTGTGAAAA.............................................................................................................................................................25151.005100100000000000000111013000001102000000000000000000000000000000001740000000156411
.............................................................................................TCCCTGAGACCCTAACTTGTGAG...............................................................................................................................................................23149.004950150010020000020011001010000230200000000000000000000000000003100000010000005120
.............................................................................................TCCCTGAGACCCTAACTTGTT.................................................................................................................................................................21143.004300500000000000010601272000000112030000000000000000000000010010000100000000000000
....................................................................................................................................ACAAGTTTTGATCTCCGGTA...........................................................................................................................20140.00401010000001000020010010120001201400000001000000000000000000000000100034246100000
....................................................................................................................................ACAAGTTTTGATCTCCGGTATC.........................................................................................................................22137.00375230000000000000000011000000320001000004000000000000000000000000000020533200000
.............................................................................................TCCCTGAGACCCTAACTTGTA.................................................................................................................................................................21134.00340220000000000025010111300001321200000000000000000000000002003000000000000100001
.............................................................................................TCCCTGAGACCCTAACTTGC..................................................................................................................................................................20133.003303000100010000000000002000000001000000000000000000000000000025000000000000000000
.................................................................................................................................TTCACAAGTTTTGATCTCCGGTAT..........................................................................................................................24131.00311510000000000000100021200020110200000000000000000000000000000030000043001100000
..................................................................................................................................TCACAAGTTTTGATCTCCGGTA...........................................................................................................................22127.00271220000000000000000100000100110400000000000000000000000000000000100003415000000
....................................................................................................................................ACAAGTTTTGATCTCCGGTATA.........................................................................................................................22125.00250020000001000000000100000000000000000000000000000000000000000100000018333200000
...............................................................................................CCTGAGACCCTAACTTGTGAA...............................................................................................................................................................21124.00240030000000000002012204300000110200000000000000000000000000002000000000100000000
..............................................................................................CCCTGAGACCCTAACTTGTGT................................................................................................................................................................21122.002200210000000000001000000000000000000000000000000000000000000000000000000000000000
.............................................................................................TCCCTGAGACCCTAACTTGTGAAC..............................................................................................................................................................24121.00216300000000000001010010000000000000000000000000000000000000000000011004102000000
............................................................................................TTCCCTGAGACCCTAACTTGTG.................................................................................................................................................................22121.002100190000000000000001000000000010000000000000000000000000000000000000000000000000
..............................................................................................CCCTGAGACCCTAACTTGTGACT..............................................................................................................................................................23121.002101140000000000010110000000000000001000000000000000000000000000000000010000000100
..................................................................................................................................TCACAAGTTTTGATCTCCGGT............................................................................................................................21120.00200530010000000010000101000000101002000000000000000000000000000200000010010000000
..............................................................................................CCCTGAGACCCTAACTTG...................................................................................................................................................................18119.001900180000000000000000001000000000000000000000000000000000000000000000000000000000
...........................................................................................ATTCCCTGAGACCCTAACTTGTGA................................................................................................................................................................24119.001900140000000000010011001000000010000000000000000000000000000000000000000000000000
.............................................................................................TCCCTGAGACCCTAACTTGTGACA..............................................................................................................................................................24119.00190020000000000001131100000000110300000000000000000000000000000000001010200000010
....................................................................................................................................ACAAGTTTTGATCTCCGGTATCC........................................................................................................................23118.00184000000000000010001030000000000100000003000000000000000000000000000020003000000
.............................................................................................TCCCTGAGACCCTAACT.....................................................................................................................................................................17117.00170000000000000000000000000000000000000000000000000000000005000001201000000001232
.............................................................................................TCCCTGAGACCCTAACTTGTGATC..............................................................................................................................................................24117.00170110000000000000000010000000430401000000000000000000000000000000000000020000000
.............................................................................................TCCCTGAGACCCTAACTTGTGTT...............................................................................................................................................................23117.00170030000000000011020010100000310100000001000000000000000000002000000000000000000
.....................................................................................................................................CAAGTTTTGATCTCCGGTAT..........................................................................................................................20113.00130120005000000000000001000000000100000001000000000000000000000000000000011000000
.............................................................................................TCCCTGAGACCCTAACTTGTGCA...............................................................................................................................................................23113.00130000001000000010010121300000000000000002000000000000000000001000000000000000000
.............................................................................................TCCCTGAGACCCTAACTTGG..................................................................................................................................................................20112.00120410000000000000010001000000000000000000000000000000000000004000001000000000000
....................................................................................................................................ACAAGTTTTGATCTCCGGT............................................................................................................................19112.00120010100000000010000100001000000001000000000000000000000000001000000002020100000
..............................................................................................CCCTGAGACCCTAACTTGTGAC...............................................................................................................................................................22110.00100070000000000000000000200000000100000000000000000000000000000000000000000000000
.............................................................................................TCCCTGAGACCCTAACTTGTTC................................................................................................................................................................22110.00100000000000000000000060000000000100000000000000000000000000003000000000000000000
..................................................................................................................................TCACAAGTTTTGATCTCCGGTATT.........................................................................................................................2418.0080010000000000000010000000000011001000001000000000000000000000000000000011000000
...............................................................................................CCTGAGACCCTAACTTGTGACT..............................................................................................................................................................2218.0080010000000000000001002000000000001000010000000000000000000000000000000200000000
...........................................................................................ATTCCCTGAGACCCTAACTTGTG.................................................................................................................................................................2317.0070030000000000000000000000000011200000000000000000000000000000000000000000000000
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTTTC..........................................................................................................................................................2817.0071010000000000000100000000000021100000000000000000000000000000000000000000000000
......................................................................................................................................AAGTTTTGATCTCCGGTAT..........................................................................................................................1917.0070000000000000000000000000000010000000000000000000000000000000040000000020000000
..............................................................................................CCCTGAGACCCTAACTTGTGAAA..............................................................................................................................................................2317.0070070000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................ACAAGTTTTGATCTCCGG.............................................................................................................................1817.0070100010000000000000000010000000000000000000000000000000000000000000010111000000
.............................................................................................TCCCTGAGACCCTAAC......................................................................................................................................................................1617.0070000000000000000000000000000000000000000000000000000000001000060000000000000000
.............................................................................................TCCCTGAGACCCTAACTTGCC.................................................................................................................................................................2117.0070000000000000000000000000000000000000000000000000000000000007000000000000000000
................................................................................................CTGAGACCCTAACTTGTGAA...............................................................................................................................................................2016.0060000000000000010012001000000010000000000000000000000000000000000000000000000000
.............................................................................................TCCCTGAGACCCTAACTTGTGTA...............................................................................................................................................................2316.0060000000000000000001000000000100000000000000000000000000000001000001000000000110
.............................................................................................TCCCTGAGACCCTAACTTGTAT................................................................................................................................................................2216.0060000000000000001001020000000000001000000000000000000000000001000000000000000000
....................................................................................................................................ACAAGTTTTGATCTCCGGTAC..........................................................................................................................2116.0060500000000000010000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................TCACAAGTTTTGATCTCCGGTATA.........................................................................................................................2415.0050000000000000000000000000100000100000000000000000000000000000000001011000000000
droMoj3
--------------------------------------------------ATTGGTATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAAAAA--------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.............................................................................................TCCCTGAGACCCTAACTTGTGA................................................................................................................................................................221113998.0011399894327377629106111031291
.............................................................................................TCCCTGAGACCCTAACTTGTG.................................................................................................................................................................21117250.00172501354311624190312167
..............................................................................................CCCTGAGACCCTAACTTGTGA................................................................................................................................................................2118246.008246824302100
.............................................................................................TCCCTGAGACCCTAACTTGT..................................................................................................................................................................2017427.0074271327023973615286
.............................................................................................TCCCTGAGACCCTAACTTGTGAA...............................................................................................................................................................2311982.0019821743079147310
..............................................................................................CCCTGAGACCCTAACTTGTG.................................................................................................................................................................2011211.001211121100000
...............................................................................................CCTGAGACCCTAACTTGTGA................................................................................................................................................................201470.004703180559502
.............................................................................................TCCCTGAGACCCTAACTTGTGT................................................................................................................................................................221435.0043521007215003
.............................................................................................TCCCTGAGACCCTAACTTG...................................................................................................................................................................191430.0043022207912441
.............................................................................................TCCCTGAGACCCTAACTTGTGC................................................................................................................................................................221409.004092711676217
....................................................................................................................................ACAAGTTTTGATCTCCGGTAT..........................................................................................................................211346.003461352365316104
..............................................................................................CCCTGAGACCCTAACTTGTGAA...............................................................................................................................................................221152.0015215200000
.............................................................................................TCCCTGAGACCCTAACTTGTGAC...............................................................................................................................................................231129.0012912002700
............................................................................................TTCCCTGAGACCCTAACTTGTGA................................................................................................................................................................231123.0012312300000
.............................................................................................TCCCTGAGACCCTAACTTGTC.................................................................................................................................................................211107.00107600182009
..............................................................................................CCCTGAGACCCTAACTTGT..................................................................................................................................................................191105.0010510301100
.............................................................................................TCCCTGAGACCCTAACTTGTGAT...............................................................................................................................................................23197.009769081703
.............................................................................................TCCCTGAGACCCTAACTTGTGACT..............................................................................................................................................................24194.00947505941
................................................................................................CTGAGACCCTAACTTGTGA................................................................................................................................................................19187.00877602306
...............................................................................................CCTGAGACCCTAACTTGTG.................................................................................................................................................................19176.0076420151900
.............................................................................................TCCCTGAGACCCTAACTTGTGG................................................................................................................................................................22171.007145091601
..................................................................................................................................TCACAAGTTTTGATCTCCGGTAT..........................................................................................................................23157.0057230715012
.............................................................................................TCCCTGAGACCCTAACTTGTT.................................................................................................................................................................21145.0045110151900
.................................................................................................TGAGACCCTAACTTGTGA................................................................................................................................................................18142.00424101000
.............................................................................................TCCCTGAGACCCTAACTTGA..................................................................................................................................................................20138.00382903402
.............................................................................................TCCCTGAGACCCTAACTTGTGAAA..............................................................................................................................................................24137.00372207800
.............................................................................................TCCCTGAGACCCTAACTT....................................................................................................................................................................18135.00353400100
.............................................................................................TCCCTGAGACCCTAACTTGTGAG...............................................................................................................................................................23131.00312703100
....................................................................................................................................ACAAGTTTTGATCTCCGGTATT.........................................................................................................................22129.00291102349
.............................................................................................TCCCTGAGACCCTAACTTGC..................................................................................................................................................................20128.00283071620
...............................................................................................CCTGAGACCCTAACTTGT..................................................................................................................................................................18128.00282071900
..............................................................................................CCCTGAGACCCTAACTTGTGC................................................................................................................................................................21125.00252500000
................................................................................................CTGAGACCCTAACTTGTG.................................................................................................................................................................18125.00252101201
.............................................................................................TCCCTGAGACCCTAACTTGTGACTT.............................................................................................................................................................25125.00252102200
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTT............................................................................................................................................................26122.00221701400
..............................................................................................CCCTGAGACCCTAACTTGTGT................................................................................................................................................................21121.00212000100
.............................................................................................TCCCTGAGACCCTAACTTGTA.................................................................................................................................................................21121.00215051100
...................................................................................................................................CACAAGTTTTGATCTCCGGTAT..........................................................................................................................22120.00201002107
..............................................................................................CCCTGAGACCCTAACTTG...................................................................................................................................................................18119.00191900000
.............................................................................................TCCCTGAGACCCTAACTTGTCC................................................................................................................................................................22117.00171103300
............................................................................................TTCCCTGAGACCCTAACTTGTG.................................................................................................................................................................22116.00161500100
...........................................................................................ATTCCCTGAGACCCTAACTTGTGA................................................................................................................................................................24114.00141400000
.....................................................................................................................................CAAGTTTTGATCTCCGGTAT..........................................................................................................................20113.00131300000
.............................................................................................TCCCTGAGACCCTAACTTGTGTT...............................................................................................................................................................23111.0011502400
..............................................................................................CCCTGAGACCCTAACTTGTGACT..............................................................................................................................................................23110.00101000000
...............................................................................................CCTGAGACCCTAACTTGTGAA...............................................................................................................................................................21110.0010703000
.................................................................................................................................TTCACAAGTTTTGATCTCCGGTAT..........................................................................................................................24110.0010700003
.............................................................................................TCCCTGAGACCCTAACTTGTTC................................................................................................................................................................2219.009203400
....................................................................................................................................ACAAGTTTTGATCTCCGGTATA.........................................................................................................................2219.009301032
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTTT...........................................................................................................................................................2719.009900000
.............................................................................................TCCCTGAGACCCTAACTTGTGCA...............................................................................................................................................................2319.009105300
..............................................................................................CCCTGAGACCCTAACTTGTGAC...............................................................................................................................................................2219.009900000
.............................................................................................TCCCTGAGACCCTAACTTGG..................................................................................................................................................................2018.008203300
....................................................................................................................................ACAAGTTTTGATCTCCGGTATC.........................................................................................................................2218.008000044
.............................................................................................TCCCTGAGACCCTAACTTTGA.................................................................................................................................................................2117.007601000
.............................................................................................TCCCTGAGACCCTAACTTT...................................................................................................................................................................1917.007204100
..............................................................................................CCCTGAGACCCTAACTTGTGG................................................................................................................................................................2116.006600000
....................................................................................................................................ACAAGTTTTGATCTCCGGTA...........................................................................................................................2016.006400200
.............................................................................................TCCCTGAGACCCTAACTTGTGACC..............................................................................................................................................................2415.005300020
.............................................................................................TCCCTGAGACCCTAACTTGTTT................................................................................................................................................................2215.005400100
..................................................................................................................................TCACAAGTTTTGATCTCCGGTA...........................................................................................................................2215.005401000
..............................................................................................CCCTGAGACCCTAACTTGTGAT...............................................................................................................................................................2214.004400000
.............................................................................................TCCCTGAGACCCTAACTTGTGATC..............................................................................................................................................................2414.004400000
....................................................................................................................................ACAAGTTTTGATCTCCGGT............................................................................................................................1914.004200200
............................................................................................TTCCCTGAGACCCTAACTTGT..................................................................................................................................................................2114.004400000
................................................................................................CTGAGACCCTAACTTGT..................................................................................................................................................................1713.003000300
.............................................................................................TCCCTGAGACCCTAACTTGTGACTC.............................................................................................................................................................2513.003200010
droGri2
AATCGATCTCATATGAAA-TTC-AC------------TGCATATTTACACATTGGTATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAAAAAA-AAACAAAAACA------------ATAA-------AACAAAAA------GC---------AA---------A------------------ASizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.............................................................................................TCCCTGAGACCCTAACTTGTGA................................................................................................................................................................2228751.001750217163339
.............................................................................................TCCCTGAGACCCTAACTTGTG.................................................................................................................................................................2121514.003028296068
..............................................................................................CCCTGAGACCCTAACTTGTGA................................................................................................................................................................212789.50157915790
..............................................................................................CCCTGAGACCCTAACTTGTG.................................................................................................................................................................202160.503213210
.............................................................................................TCCCTGAGACCCTAACTTGT..................................................................................................................................................................202121.5024321726
.............................................................................................TCCCTGAGACCCTAACTTGTGAA...............................................................................................................................................................232118.002362342
...............................................................................................CCTGAGACCCTAACTTGTGA................................................................................................................................................................20241.0082757
....................................................................................................................................ACAAGTTTTGATCTCCGGTAT..........................................................................................................................21235.00704228
.............................................................................................TCCCTGAGACCCTAACTTGTGACT..............................................................................................................................................................24230.5061601
.............................................................................................TCCCTGAGACCCTAACTTGTGAC...............................................................................................................................................................23225.0050500
.............................................................................................TCCCTGAGACCCTAACTTGTGAT...............................................................................................................................................................23221.0042420
.............................................................................................TCCCTGAGACCCTAACTTG...................................................................................................................................................................19219.5039390
............................................................................................TTCCCTGAGACCCTAACTTGTGA................................................................................................................................................................23217.0034340
..................................................................................................................................TCACAAGTTTTGATCTCCGGTAT..........................................................................................................................23214.0028208
..............................................................................................CCCTGAGACCCTAACTTGT..................................................................................................................................................................19212.5025250
..............................................................................................CCCTGAGACCCTAACTTGTGAA...............................................................................................................................................................22212.0024240
................................................................................................CTGAGACCCTAACTTGTGA................................................................................................................................................................19210.0020200
.............................................................................................TCCCTGAGACCCTAACTTGTGT................................................................................................................................................................2229.5019190
.................................................................................................TGAGACCCTAACTTGTGA................................................................................................................................................................1827.5015150
...............................................................................................CCTGAGACCCTAACTTGTG.................................................................................................................................................................1926.5013130
.............................................................................................TCCCTGAGACCCTAACTTGTGAG...............................................................................................................................................................2326.0012120
.............................................................................................TCCCTGAGACCCTAACTT....................................................................................................................................................................1826.0012120
..............................................................................................CCCTGAGACCCTAACTTGTGAC...............................................................................................................................................................2224.50990
..............................................................................................CCCTGAGACCCTAACTTGTGACT..............................................................................................................................................................2324.00880
...................................................................................................................................CACAAGTTTTGATCTCCGGTAT..........................................................................................................................2223.50734
................................................................................................CTGAGACCCTAACTTGTG.................................................................................................................................................................1823.50770
.............................................................................................TCCCTGAGACCCTAACTTGTGACTT.............................................................................................................................................................2523.50770
..............................................................................................CCCTGAGACCCTAACTTG...................................................................................................................................................................1823.00660
.............................................................................................TCCCTGAGACCCTAACTTGTGG................................................................................................................................................................2223.00660
.............................................................................................TCCCTGAGACCCTAACTTGTGAAA..............................................................................................................................................................2423.00660
.....................................................................................................................................CAAGTTTTGATCTCCGGTAT..........................................................................................................................2022.50550
.............................................................................................TCCCTGAGACCCTAACTTGA..................................................................................................................................................................2022.50550
....................................................................................................................................ACAAGTTTTGATCTCCGGTATT.........................................................................................................................2222.50532
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTT............................................................................................................................................................2622.50550
..............................................................................................CCCTGAGACCCTAACTTGTGAT...............................................................................................................................................................2222.50550
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTTT...........................................................................................................................................................2722.00440
............................................................................................TTCCCTGAGACCCTAACTTGTG.................................................................................................................................................................2222.00440
.................................................................................................................................TTCACAAGTTTTGATCTCCGGTAT..........................................................................................................................2422.00413
.............................................................................................TCCCTGAGACCCTAACTTGTGATG..............................................................................................................................................................2421.50330
.............................................................................................TCCCTGAGACCCTAACTTGTGATA..............................................................................................................................................................2421.50330
..................................................................................................................................TCACAAGTTTTGATCTCCGGTA...........................................................................................................................2221.50330
...............................................................................................CCTGAGACCCTAACTTGTGAA...............................................................................................................................................................2121.00220
.............................................................................................TCCCTGAGACCCTAACTTGTGAAC..............................................................................................................................................................2421.00220
...........................................................................................ATTCCCTGAGACCCTAACTTGTGA................................................................................................................................................................2421.00220
.............................................................................................TCCCTGAGACCCTAACTTGC..................................................................................................................................................................2020.50110
.............................................................................................TCCCTGAGACCCTAACTTGTGAACC.............................................................................................................................................................2520.50110
.............................................................................................TCCCTGAGACCCTAACTTGTGGA...............................................................................................................................................................2320.50110
................................................................................................................................TTTCACAAGTTTTGATCTCCGG.............................................................................................................................2220.50110
................................................................................................CTGAGACCCTAACTTGTGG................................................................................................................................................................1920.50110
....................................................................................................................................ACAAGTTTTGATCTCCGGTATTT........................................................................................................................2320.50110
..............................................................................................CCCTGAGACCCTAACTTGTGAGAG.............................................................................................................................................................2420.50110
.................................................................................................TGAGACCCTAACTTGTGAT...............................................................................................................................................................1920.50110
...............................................................................................CCTGAGACCCTAACTTGTGAC...............................................................................................................................................................2120.50110
.............................................................................................TCCCTGAGACCCTAACTTT...................................................................................................................................................................1920.50110
..............................................................................................CCCTGAGACCCTAACTTGTGT................................................................................................................................................................2120.50110
..................................................................................................................................TCACAAGTTTTGATCTCCGGT............................................................................................................................2120.50101
...............................................................................................CCTGAGACCCTAACTTGTGACCG.............................................................................................................................................................2320.50110
.............................................................................................TCCCTGAGACCCTAACTTGTGATCA.............................................................................................................................................................2520.50110
....................................................................................................................................ACAAGTTTTGATCTCCGGTA...........................................................................................................................2020.50110
..................................................................................................................................TCACAAGTTTTGATCTCCGGTATTT........................................................................................................................2520.50110
.............................................................................................TCCCTGAGACCCTAACTG....................................................................................................................................................................1820.50110
.............................................................................................TCCCTGAGACCCTAACTTGTGAGC..............................................................................................................................................................2420.50110
.............................................................................................TCCCTGAGACCCTAACTTGTGACA..............................................................................................................................................................2420.50110
...........................................................................................ATTCCCTGAGACCCTAACTTGTG.................................................................................................................................................................2320.50110
..................................................................................................................................TCACAAGTTTTGATCTCC...............................................................................................................................1820.50110
..............................................................................................CCCTGAGACCCTAACTTGTGACTTTT...........................................................................................................................................................2620.50110
..........................................................................................GATTCCCTGAGACCCTAACTTGTGA................................................................................................................................................................2520.50110
..............................................................................................CCCTGAGACCCTAACTTGTGACA..............................................................................................................................................................2320.50110
..................................................................................................................................TCACAAGTTTTGATCTCCGGTT...........................................................................................................................2220.50110
...................................................................................................................................CACAAGTTTTGATCTCCGGTATT.........................................................................................................................2320.50110
............................................................................................TTCCCTGAGACCCTAACTTGTGAA...............................................................................................................................................................2420.50110
.............................................................................................TCCCTGAGACCCTAACTTGTGTT...............................................................................................................................................................2320.50110
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTA............................................................................................................................................................2620.50110
..............................................................................................CCCTGAGACCCTAACTTGTGAAA..............................................................................................................................................................2320.50110
....................................................................................................................................ACAAGTTTTGATCTCCGG.............................................................................................................................1820.50110
.............................................................................................TCCCTGAGACCCTAACTTGTGAAAC.............................................................................................................................................................2520.50110
.......................................................................................................................................AGTTTTGATCTCCGGTAT..........................................................................................................................1820.50110
.............................................................................................TCCCTGAGACCCTAACTTGTGAGCA.............................................................................................................................................................2520.50110
..............................................................................................CCCTGAGACCCTAACTTGTGAAG..............................................................................................................................................................2320.50110
.............................................................................................TCCCTGAGACCCTAACTTGTGATC..............................................................................................................................................................2420.50110
..................................................................................................................................TCACAAGTTTTGATCTCCGGTATTG........................................................................................................................2520.50110
..............................................................................................CCCTGAGACCCTAACTTGTTT................................................................................................................................................................2120.50110
...................................................................................................................................CACAAGTTTTGATCTCCGGTATTGC.......................................................................................................................2520.50110
.............................................................................................TCCCTGAGACCCTAACTTGTGC................................................................................................................................................................2220.50110
...........................................................................................ATTCCCTGAGACCCTAACTTGTGAG...............................................................................................................................................................2520.50110
droAna3
A------------------TGCATCCG-------CCGGGCGCATGTAAATATTGGTATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAATACAAAA---------------------AAGATAA-------AGCAAA--------------------------------------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.............................................................................................TCCCTGAGACCCTAACTTGTGA................................................................................................................................................................22187820.008782069230213661249111463
.............................................................................................TCCCTGAGACCCTAACTTGTG.................................................................................................................................................................21124562.0024562194663115231823387
.............................................................................................TCCCTGAGACCCTAACTTGT..................................................................................................................................................................20113887.00138872052007773811020
..............................................................................................CCCTGAGACCCTAACTTGTGA................................................................................................................................................................2115840.0058405825002112
..............................................................................................CCCTGAGACCCTAACTTGTG.................................................................................................................................................................2011731.001731173000100
.............................................................................................TCCCTGAGACCCTAACTTGTGAA...............................................................................................................................................................2311524.001524132240661131
.............................................................................................TCCCTGAGACCCTAACTTGTGT................................................................................................................................................................2211057.00105726800854700
.............................................................................................TCCCTGAGACCCTAACTTG...................................................................................................................................................................191558.005584221060075
.............................................................................................TCCCTGAGACCCTAACTTGTGACT..............................................................................................................................................................241435.004353560018160
...............................................................................................CCTGAGACCCTAACTTGTGA................................................................................................................................................................201326.003262680045013
.............................................................................................TCCCTGAGACCCTAACTTGTGG................................................................................................................................................................221238.00238217006015
.............................................................................................TCCCTGAGACCCTAACTTGTGAC...............................................................................................................................................................231200.00200179007113
....................................................................................................................................ACAAGTTTTGATCTCCGGTAT..........................................................................................................................211178.001785100344152
..............................................................................................CCCTGAGACCCTAACTTGT..................................................................................................................................................................191174.0017416800006
..............................................................................................CCCTGAGACCCTAACTTGTGAA...............................................................................................................................................................221122.0012212200000
.............................................................................................TCCCTGAGACCCTAACTTGTGC................................................................................................................................................................221105.0010530006807
...............................................................................................CCTGAGACCCTAACTTGTG.................................................................................................................................................................191105.0010587001602
.............................................................................................TCCCTGAGACCCTAACTTGA..................................................................................................................................................................201105.0010582001022
.............................................................................................TCCCTGAGACCCTAACTTGTGAT...............................................................................................................................................................23191.009163005023
.............................................................................................TCCCTGAGACCCTAACTTGTGACTT.............................................................................................................................................................25183.008369003011
................................................................................................CTGAGACCCTAACTTGTGA................................................................................................................................................................19181.00817300116
.............................................................................................TCCCTGAGACCCTAACTTGTT.................................................................................................................................................................21172.007218008046
............................................................................................TTCCCTGAGACCCTAACTTGTGA................................................................................................................................................................23163.00636300000
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTT............................................................................................................................................................26161.00615400007
.............................................................................................TCCCTGAGACCCTAACTTGTA.................................................................................................................................................................21147.004714003129
.................................................................................................TGAGACCCTAACTTGTGA................................................................................................................................................................18139.00393700002
..................................................................................................................................TCACAAGTTTTGATCTCCGGTAT..........................................................................................................................23136.003614001039
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTTT...........................................................................................................................................................27132.00322910101
.............................................................................................TCCCTGAGACCCTAACTTGTGAAA..............................................................................................................................................................24130.00301900317
...............................................................................................CCTGAGACCCTAACTTGT..................................................................................................................................................................18129.002910004015
.............................................................................................TCCCTGAGACCCTAACTT....................................................................................................................................................................18127.00272400102
................................................................................................CTGAGACCCTAACTTGTG.................................................................................................................................................................18127.00271800225
..............................................................................................CCCTGAGACCCTAACTTG...................................................................................................................................................................18125.00252500000
....................................................................................................................................ACAAGTTTTGATCTCCGGTATT.........................................................................................................................22124.0024800268
..............................................................................................CCCTGAGACCCTAACTTGTGACT..............................................................................................................................................................23123.00232300000
.............................................................................................TCCCTGAGACCCTAACTTGTC.................................................................................................................................................................21122.00225003113
.............................................................................................TCCCTGAGACCCTAACTTGTGAG...............................................................................................................................................................23121.00211500303
.............................................................................................TCCCTGAGACCCTAACTTGC..................................................................................................................................................................20120.00200305012
.............................................................................................TCCCTGAGACCCTAACTTGTGTT...............................................................................................................................................................23117.00174000013
............................................................................................TTCCCTGAGACCCTAACTTGTG.................................................................................................................................................................22116.00161600000
..............................................................................................CCCTGAGACCCTAACTTGTGAC...............................................................................................................................................................22115.00151500000
..............................................................................................CCCTGAGACCCTAACTTGTGT................................................................................................................................................................21115.00151500000
..............................................................................................CCCTGAGACCCTAACTTGTGG................................................................................................................................................................21110.00101000000
..............................................................................................CCCTGAGACCCTAACTTGA..................................................................................................................................................................1919.009900000
.................................................................................................................................TTCACAAGTTTTGATCTCCGGTAT..........................................................................................................................2418.008400202
..................................................................................................................................TCACAAGTTTTGATCTCCGGT............................................................................................................................2117.007100105
..............................................................................................CCCTGAGACCCTAACTTGTGACTT.............................................................................................................................................................2417.007700000
..............................................................................................CCCTGAGACCCTAACTTGTGACTTT............................................................................................................................................................2516.006600000
.............................................................................................TCCCTGAGACCCTAACTTGTCT................................................................................................................................................................2216.006000213
....................................................................................................................................ACAAGTTTTGATCTCCGGTA...........................................................................................................................2016.006200013
.............................................................................................TCCCTGAGACCCTAACTTGTTT................................................................................................................................................................2216.006100104
.....................................................................................................................................CAAGTTTTGATCTCCGGTAT..........................................................................................................................2015.005500000
...........................................................................................ATTCCCTGAGACCCTAACTTGTGA................................................................................................................................................................2415.005500000
.............................................................................................TCCCTGAGACCCTAACTTGG..................................................................................................................................................................2015.005100400
...............................................................................................CCTGAGACCCTAACTTGTGAA...............................................................................................................................................................2115.005500000
...................................................................................................................................CACAAGTTTTGATCTCCGGTAT..........................................................................................................................2215.005400010
.............................................................................................TCCCTGAGACCCTAACTGA...................................................................................................................................................................1924.509600003
.............................................................................................TCCCTGAGACCCTAACTTGTGACA..............................................................................................................................................................2414.004400000
..................................................................................................................................TCACAAGTTTTGATCTCCGGTA...........................................................................................................................2214.004100300
..............................................................................................CCCTGAGACCCTAACTTGTGACTTTT...........................................................................................................................................................2613.003300000
.............................................................................................TCCCTGAGACCCTAACTTGTGTA...............................................................................................................................................................2313.003200100
....................................................................................................................................ACAAGTTTTGATCTCCGGT............................................................................................................................1913.003200001
droBip1
A------------------TGCATCCG-------CCGGGCGCATGTAAATATTGGTATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAATAAAAAA---------------------G--ATAA-------AGCAAA--CGA-------------------------GA------------------SizeHit CountTotal NormTotal
No Reads
droKik1
-------------------------------------------------TATTGGCATTGATAGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGCAAAAAA---------------------A--GTAA-------GATAAAAA------GC---------AAGAGCTGCGAGA------------------SizeHit CountTotal NormTotal
No Reads
droFic1
A-----------------------------------------------ATATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAATAAAAAA--------------------------AC-------GGCAAAAA------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
A------------------TGCAAC----------CGGGCATATGTAAATATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAAAAAA---------------------A---GA-AAACCCAGGCAAAAACAATA-------------ACAACTGATCGA------------------SizeHit CountTotal NormTotal
No Reads
droRho1
AAGCCTTGGA-AATGTAAATGCATC----------CGGGCATATGTAAATATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAAAAAA--A------------------A---CA-A-----AGGCAAAAGCAAAA----------------ACTGATCGA------------------SizeHit CountTotal NormTotal
No Reads
droBia1
A--CTTTTG--------AATGCATC----------CGGGCATATGTAAATATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAAAAAA---------------------A---CA-A-----AGGCAAGACCAAAA-GC----------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
A------------------TGCAAC----------CGGGCATATGTAAATATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAAAAAA---------------------A---CA-A-----AGGCAAAAACCAAA-GCTAACCATG--------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
--------------------GCAAC----------CGGGCATATGTAAATATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAATGAAAAATAA------------------A---CA-A-----AGGCAAAAACAAAA----------------GCTGATGGAGGGCAGCAATAAATGGAASizeHit CountTotal NormTotal
No Reads
dm3
A----------------------------------------------AATATTGGCATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAAAAAA-------------------------TAA-------GGCAAAAACGAA--------------------------------------------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.............................................................................................TCCCTGAGACCCTAACTTGTGA................................................................................................................................................................221653339.006533390000118335915351174321506923313108110022432014923960138261221798102528060514403676585774334827692513853054896582194933541073163159616200024952105472000000000000000001061001016617223912013301910310225703694756189123047463409112453757458631919509928626611484622962605678526938722807417014365702318821114155482321115751245567146565435734142022158739776282290111165208515745864588172192327533351000001334402001741816350012497595302143949514907112532541166935861963313156152800450964441885349138911100252816184827420201397416719328102511724739869123374171119081116477611249411046146981639915438194214123001950306098112299787519552970220126784209286393313310105442347297511314668524150016662763104122962637400814352548111522639617128117088126725731116188401637316152641447754248511772091334610203131670187822810221189102210845210190783292713054728809128781071883258
.............................................................................................TCCCTGAGACCCTAACTTGTG.................................................................................................................................................................211162820.00162820000042955000020120110591722120220121422887050376198119339842951798703980715364205014719142372719525777501900032016349000000000000000001611785364200510017579097111237235185730202207501113341780112283665614725440524234263192431573143301201959401351935370268222348171041231230000054453318511650122023180000016000082079152043397254241980323112774221217457851745187195330020061982045421543300980146140000076224006000361106019137365510738591106520133710116840000010020088644661005213471976681028383001013701106302920402039830012751416417516360027689197117572478280400189126483871062330498181346657311060154250406195112001000254260143799242217232102110838
.............................................................................................TCCCTGAGACCCTAACTTGT..................................................................................................................................................................20146770.00467700000720000000013103304127503016853263189120121721415119194181054102534262000642714000000000000000003451400000100041353185152700352661000111153030171146411175116423305268173543810161000000000000920128961954370000024400082713470371552065521854288974617195861000002075302552302330014101161900000263412600400069331733024035446021684633000000000001812335550013803420312400000334002006320101000100142267120212207273731310021206119850645423790026113714201323243412554622164777180209171101001590142104741913521694172240906641
....................................................................................................................................ACAAGTTTTGATCTCCGGTAT..........................................................................................................................21115298.0015298000017000000020000000131110101500000038740112230459522124293000791169000000000000000001200301001000813233710620795700685737550220023483140227322121120264200505400000002100000015241218175012311416000000000002391540160115314410435121232302200000211343859190003101900000266000000000197610175342431032206542903664883002100000034150000241801940020283051215690133521000119751144802159114071489000583521091361361490284365241936368530212247603603591702861140032249544001281761868124575051100400
.............................................................................................TCCCTGAGACCCTAACTTGTGAA...............................................................................................................................................................2318388.0083880000395000001307003802421400000000000223201450330112620000000000000000000000003500421330000002201541911265518510423079419111703468181901493315620212097261161151101341330000041200000000542090312100000000000471513034410222186418212042393210000057585114600004303400000084000000000977213510214355966522217912410001780010016721000814403400000221000001600025000025249271927132100031683945066001740038422831132004511200017400100432821038000000
.............................................................................................TCCCTGAGACCCTAACTTGTGT................................................................................................................................................................2216006.006006000010200100020660410010300000000000212500627461301312920000000000000000000000002001216210000091215588040204700443267142015118171000028386372100298411130342712300000200100000012332360103000000000002013630134113712393459040136820000275122940008017700000004010011000213225691112921410000010000002411620001343140700000041000000400021000010164113173140001575417197007001252111315140004640011760017027738372101214000202
.............................................................................................TCCCTGAGACCCTAACTTGTGC................................................................................................................................................................2215789.00578900006000001020000000311601000000000212252253122196504966621500000000000000000000000000010000000003051225141100114102031031110200846998263124126832131455643109141600112130100000011202130015000000100102331070970178441576100000635020000101000000000000010001228121410590000010000010300720012278027100109001001500020000061934421117000091019182700330134513037118500110000000400102602010000000
.............................................................................................TCCCTGAGACCCTAACTTGTGACT..............................................................................................................................................................2415725.0057250000123000000109006100001000322132941200101000000001001110001071012800000000000000000131022300000002140601101951001312299810501517511022579393086458431503583787100020010000000010100120220000000000002753200190032541083141220323231300000713504000030200000010000000000272787986993631541309400000000000328200024560800000220000005000200000110416010001620262343001002000210145000112000045002025370211000005
...............................................................................................CCTGAGACCCTAACTTGTGA................................................................................................................................................................2013931.0039310000200000000000000039010000000000011911482919127125661018143000100000000000000000000020000000000001101480054160002003100001011440502113320536800000001010001038741010640650000000000050430301027544540186501000008949322300018111000000100000000004978394414410247291151551951290000000010028583002164660126000003210010229000580000592457182416112550002186110280780014204336413117151400062230000790012010331724912000000
.............................................................................................TCCCTGAGACCCTAACTTG...................................................................................................................................................................1912911.002911000000000000002002001002000284292401010102012030001130000014630000000000000000001003000000000012008060000211001013000000040908091103012404600280000000000010000270010000000000006141703522262753095020441800000653432000201000000000000000000102123274213200000000000105910002028607000004000100200060000120001230000194118309900000202007027000010000010001031516031000000833
.............................................................................................TCCCTGAGACCCTAACTTGTGAC...............................................................................................................................................................2312304.002304000051000000103101000003000110293100010000003000001311000032139068000000000000000000210700000000621550138241028307820340116401021304810031196202193231900200000000000010101800000000000000040510381162330321310570000001413341000001000000000000000002723473621252672494500004200000682000101005000003000001300030000030135230000478290040000100633300003000001200000920002000008
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTT............................................................................................................................................................2611247.001247000021000000000000000000000002292000000010000000010000000091730000000000000000000011000000002083017060012360001021110001005130140631601811011000001004000000000004002000000000000645404010572222902905000000012370300000000000010000000000012122654354729975872000000000000300007504000002000001100040000020038000000143010000000000100000110000000000000100011000000
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTTT...........................................................................................................................................................2711213.00121300002000000000000000000000001013150100100000000000000000008210000000000000000001100200000000107101504007112520010710110007149051104180151141500000000300000001000400000000000000047480390049160131201234000006510000000010000000000000000000015772409146959287000000000002200001201000003000000000000000320000010000041310010000010002000001000000000000200000000000
.............................................................................................TCCCTGAGACCCTAACTTGTGACTT.............................................................................................................................................................2511185.00118500005100000000000000000000002133251000001000000000000000001224000000000000000000010910000000008203076002077200004700000112013022011435013421180000001110000000000040000000000000004768068004330136230042100000111712000000300000060000000000160013281831124025130000000000009000099010000020010001000200001111230000002613430010000000104000000000002000100520000000000
.............................................................................................TCCCTGAGACCCTAACTTGTGG................................................................................................................................................................2211181.00118100001350000101010000000060000000000000010006100106110100000000000000000000000000017300000017134601331600108314063031600101130171313014217011130140000010000000000000010000000000000005349059103191120374630000001448400000500000000010010010001014510001214430000000010013160000882701800000200000020007000036082532001037161290032000101000200002000010000003522101000000
..................................................................................................................................TCACAAGTTTTGATCTCCGGTAT..........................................................................................................................231992.00992000020000000000000000100000000000001101202200100214000001310000000000000000000000000000000100002000641200010121000080520101040403200000000000000002223706000000000000015140800630702020200000171151000808000000000000000003501654218307136635800000000000131000030100000100000170006000015162239213339000116610640042046966533200139010025180050014528110000025
.............................................................................................TCCCTGAGACCCTAACTTGTT.................................................................................................................................................................211871.0087100008200000000210200000000000000000010100001100011000000000000000000000000000000100000000001007110000300000010000011114080301111041097157000100000000000000007000000000010000354801611212414420000001110100001000000000000000000000010000000000000000000288000053110018000004000000000010000000000000000411631300000010004210000000000000001021101000000000
...............................................................................................CCTGAGACCCTAACTTGTG.................................................................................................................................................................191859.008590000000000000000000000000102151818110140030051201020020000000000000000000000000001000000000000002000001400000000000000640409516121420000000000000001020029000000000000000192601533420520115142220000029201000010000000000000000000212031019845162370000000000063130004764014000001500000020005000033001112000051716292700510000103128000031000072002023096414000002
.............................................................................................TCCCTGAGACCCTAACTTGTGATC..............................................................................................................................................................241825.008250000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002301000000100000534284000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................CCCTGAGACCCTAACTTGTGA................................................................................................................................................................211796.007960000100000100010000000120000000000000101020200000110000022251000000000000000000200300010000312330187260028243630771616011021704101001611002000000000000000002008000000000000000191301211112922418215122000026201010010000000000110300000024158441264720000000000028000013120800000200000110006000043907320390001939880010003900020300104000000100201100010000001
................................................................................................CTGAGACCCTAACTTGTGA................................................................................................................................................................191771.007710000000000000000000031013000000000001010004100000011100000000000000000000000000002000000001041012600166001100510001000000000001001000000000000000413910911220540000000000017040031301102030000007737200040100000001000000000101551111000000000000000001100008404000001000000200080000751114443221000114172432350012100028187539005819010002500103140210000004
....................................................................................................................................ACAAGTTTTGATCTCCGGTATT.........................................................................................................................221747.00747000000000000000000000011000020000000000101011010017100004820000000000000000000101000000000010000000310000000000000002100010201000000000000000000102314030200000000000560600241724218000000234210000000000003000000000013012294111791917000000000003200005401100001000000300020000031762753433300051517717800320210414123132200491700007103210904131241016100200
.............................................................................................TCCCTGAGACCCTAACTTGTGAT...............................................................................................................................................................231716.00716000020000010000002000110000000000000100000511000012000000000000000000000000000011000000001061033700313020030220000072167050742115211800010000000000011101130000000000000002634092112831601732650000042408100060400000001000000000491142147612121400001630000041200001210041000010000000000200002367374500008622900200003003526000120000011005052230104000000
.............................................................................................TCCCTGAGACCCTAACTTGTA.................................................................................................................................................................211514.005140000233010020001250110000000000000000000010000000000000000000000000000000000000000400000000004001150013213013044001002302810102021407015600010000000000000000400000000000000031410243451472008149000000351000000101000000000000000001321100210100000000000036000021606000005000000000000000010000000000040240000000000000000010000000000100500000000001
.............................................................................................TCCCTGAGACCCTAACTT....................................................................................................................................................................181499.0049900000000000000000000010000001840232000000000010000000000030000000000000000000110020000000000100304001021000003000000012100002017644006230000000000000000100000000000000014506407240211110120000017020000000130000000000000000003300100000000000000000100000000000001000000100000000000000000000010010000000000000000000000002300100141010400000150
.............................................................................................TCCCTGAGACCCTAACTTGTGAAA..............................................................................................................................................................241494.00494000040000000000000000100000000000000000000010000001000000000000000000000000010002300000001041031690008231200014300010010010090511206600000000000000000200500000000000000023310181018130130190280000004520300000000000000000000000000023102652677000010000002200003002000001000000000000000000000110000155360020010000000300000000002100100400000000000
....................................................................................................................................ACAAGTTTTGATCTCCGGTA...........................................................................................................................201432.0043200000000000000000000100000020000000000000010011000000000110000000000000000001010000000001011202100011000040210000000100000010200200000000000000000100100000000000000036060232310371220000051420000101000000000000000001200842442270000000000021000002011000000000107001560000018633535116000291320001100916031812000140000322100601810013100000
.............................................................................................TCCCTGAGACCCTAACTTGTC.................................................................................................................................................................211349.003490000400000000058000000010000000000000000000000000010000000000000000000000000000010000000000300100000002000000000002076050409140511000000000000000000014000000000000000202901951821402744000008500000000020000000000000000000010000111000000000000290000111208000001000000000000000010001000000012690001000000000000000000000000100110000000000
.............................................................................................TCCCTGAGACCCTAACTTGA..................................................................................................................................................................201343.003430000300000200000000000000000000000000000000000000000000000000000000000000000000010000000060930981000662110000250000280000000010001200000000000000000001100000000000000031305300243321831200000120110001000000001000000000012016913149101310000000000001210000100000001000000000000000010120110000214460000000000000000000000002000001501100000201
.............................................................................................TCCCTGAGACCCTAACTTGTTC................................................................................................................................................................221303.00303000000000000000000000000000000000000100006100000010000000000000000000000000000000000000000000010100000000000000000031510000120823487400000000000000000000000000000000000017405000000000000000010000000000000000000000000000000000000000000200000010000012807000000000000000000000000000000000000140000000000100000000000000000000000000000000
....................................................................................................................................ACAAGTTTTGATCTCCGGTATA.........................................................................................................................221287.00287000000000000000000000110000000000000010001001100011100000000000000000000000000000000000010010000000010000000000000003001003300000000000000000000000000000000000000000210120005120102200000000000000000000000000000000010007659254710000010000000000000000000002000001400017000014412070110002310212000001111111600007520000421600701240303000100
...................................................................................................................................CACAAGTTTTGATCTCCGGTAT..........................................................................................................................221251.0025100000000000000000000000100000000000000000000100002200000100000000000000000000000000000000001001020020000020000000000110000000001000000000000000000010000010000000000074050013010101100000100100001000000002000000000001002175718101817000100000001100000100000001000001000060000000459040000523020040023800101100033000002700101211301000007
.............................................................................................TCCCTGAGACCCTAACTTGG..................................................................................................................................................................201245.002450000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000020000000030104000000000000000000001000000000000000107030052011301232600000520010000000000000000010000000000001000000000000000007000045010000010000000000000002110030000004654100010000000000000000000010000002000000000011
...............................................................................................CCTGAGACCCTAACTTGT..................................................................................................................................................................181221.0022100000000000000000000000000000000000202000000000010020000000000000000000000000000100000000000000000000000000000000000200001000001000000000000000000001200000000000000000001000000110000000210100001000000000000000000001130011011000000000000290000312000000090000010000200002701210120000010322600100002002011000010000010002006720212000000
................................................................................................CTGAGACCCTAACTTGTG.................................................................................................................................................................181202.0020200000000000000000000000600001114501010000000000000000000000000000000000000000000000000000000000000000020000000000000010000000000000000000000000001120231000000000000000250000051151101000000200010000000000000000000000002110000000000000000000020000010000000000000000001000011001000000074314360042010100210400030000001000001200200000000
..............................................................................................CCCTGAGACCCTAACTTGTG.................................................................................................................................................................201175.001750000100000001032000000000001100000000000000000100010000052000000000000000000000010000000000300011000122000000300000200101011400000000000000000000000001000000000000000151107123611114581000006001000000000000000000000000000100010000000000000000400001401000001000000000000000110010000000112220000000000010000010000000000000100001000003
.................................................................................................TGAGACCCTAACTTGTGA................................................................................................................................................................181161.001610000000000000001000012000001000000002000010000001000000000000000000000000000000000000000010010102006710100000000000001000001100010000000001000000120206000000000000000300341510118010000000012000000000100000000000000000443500000000000020000001000001100000000000000000000000060112020000120320000001200000000003000001000000000000000000
..................................................................................................................................TCACAAGTTTTGATCTCCGGT............................................................................................................................211159.00159000000000000001000000000000000000000000000000000000000000100000000000000000000000000000000000000000008000001000000000300000102002000000000000000000002000000000000000350100220101001000000430000000000000000000000000000002200540200000000000000000210000000200000110003000003020511000026113400000110106134000010000013000011071110000000
.................................................................................................................................TTCACAAGTTTTGATCTCCGGTAT..........................................................................................................................241155.00155000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000001300000000000000100000110000000000000000000000000000000000000000024010010000213000000500100000000000000000000000000009247258500000000000010000100200000000000010004000001312114040000311350021000010302000031000000200200100010000000
.............................................................................................TCCCTGAGACCCTAACTTGTGCA...............................................................................................................................................................231149.0014900000000000000000000000000000000000000000000000010100000000000000000000000000000000000000100001020010300000000000010182000001022133180000001000000000000010000000000000005707000001000100000000000000000000000000000000000000010000000000000000001000003100000000000000000010000000010000000000010000000000200000000000000000000000000000000
.............................................................................................TCCCTGAGACCCTAACTTGC..................................................................................................................................................................201148.00148000000000000001000000000000000000000000000100000000000000000000000000000000000001000000000000000000000000000000000003000000001020000000000000000000004000000000000000880510600104080000002000100000000000000000100000002000000000000000000000071000011010000000000000000000000201000000003514300100000000012000000000000000002200011000003
.............................................................................................TCCCTGAGACCCTAACTTGTGAG...............................................................................................................................................................231145.00145000020000000000000000000000000000000000001000000000000000000000000000000000000000000000000050030500102000000100000204200010500013000000000000000000000000000000000000312050014051601100000010100000000000000000000000000000006211521000000000001400004201000004000000000010000000000000000031410010000100110000000000000000000000000000000
..............................................................................................CCCTGAGACCCTAACTTGT..................................................................................................................................................................191132.0013200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000024000000010001000000200000000000000000000000000001000000000000000000000120000020000000100000000000000001100000000000002000000000000010000000000000000060000000000103
....................................................................................................................................ACAAGTTTTGATCTCCGGTAA..........................................................................................................................211109.001090000000000000000000000000000000000000000000000000100000000000000000000000000000010000000100100000000400000003000000000000000010000000000000000000000010000000000000001304000100041300000010000000001000000000000000000000100210100000010000000000000000000000000000000800002731015080002100110010002211030100001000000400002310000000000
....................................................................................................................................ACAAGTTTTGATCTCCGGT............................................................................................................................191106.0010600000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000100200000000000000031000010000210000000001000000000000000000000000010000010011000000000000020000010000000000000000008000016051191300024110000000000210500000120000001300300310010000000
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTTTA..........................................................................................................................................................28197.009700000000000000000000000000000000000000000000000000000000333170000000000000000000001000000000000000000000000000000000000001000100100000000000000000000000000000000000000110000100000010000000000000000000000000000000000000034021222000000000000000000100000000000000000000000000000000000000010000000000000000000000000000000000000000000
droSim2
GAATGCCTAAGTATGTAAATGCAAC----------CGGGCGTATGTAAATATTGGCATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAAAAAA-------------------------TAA-------GGCAAAGGCGAA--------------------------------------------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.............................................................................................TCCCTGAGACCCTAACTTGTGA................................................................................................................................................................22186276.00862763847505877702237933599734018186561272201031477001
.............................................................................................TCCCTGAGACCCTAACTTGTG.................................................................................................................................................................21117318.00173181641194217518382882543743412545019143000
.............................................................................................TCCCTGAGACCCTAACTTGTGAC...............................................................................................................................................................23113704.0013704331313242953102794533002003000
.............................................................................................TCCCTGAGACCCTAACTT....................................................................................................................................................................1812848.0028486002627220023107000000
.............................................................................................TCCCTGAGACCCTAACTTG...................................................................................................................................................................1912580.00258031024133455168827280013001000
.............................................................................................TCCCTGAGACCCTAACTTGT..................................................................................................................................................................2012570.00257016264173320138124320300630015000
....................................................................................................................................ACAAGTTTTGATCTCCGGTAT..........................................................................................................................2112534.00253478023271954166142145101705873829164
.............................................................................................TCCCTGAGACCCTAACTTGTGACT..............................................................................................................................................................2411820.00182011367104848277123113000004000
.............................................................................................TCCCTGAGACCCTAACTTGTGAA...............................................................................................................................................................2311664.001664839123331800145131641101074000
.............................................................................................TCCCTGAGACCCTAACTTGTGG................................................................................................................................................................221804.00804673113360032004000000
..............................................................................................CCCTGAGACCCTAACTTGTGA................................................................................................................................................................211711.007115130616321024002000000
.............................................................................................TCCCTGAGACCCTAACTTGTGACTT.............................................................................................................................................................251504.00504341164513891616000004000
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTT............................................................................................................................................................261267.00267133801411402533000012000
..................................................................................................................................TCACAAGTTTTGATCTCCGGTAT..........................................................................................................................231243.00243912510142520240010041010
....................................................................................................................................ACAAGTTTTGATCTCCGGTATT.........................................................................................................................221206.002069137021411100000837014
..............................................................................................CCCTGAGACCCTAACTTGTG.................................................................................................................................................................201199.0019933101534800000000000
..................................................................................................................................TCACAAGTTTTGATCTCCGGT............................................................................................................................211132.001321039300437000003000
....................................................................................................................................ACAAGTTTTGATCTCCGGTA...........................................................................................................................201112.00112308017159130000220016
.............................................................................................TCCCTGAGACCCTAACTTGTGACC..............................................................................................................................................................241110.001101044110000000000000
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTTT...........................................................................................................................................................271106.00106455071131417000004000
...............................................................................................CCTGAGACCCTAACTTGTGA................................................................................................................................................................20196.00961820220020100023001000
.................................................................................................TGAGACCCTAACTTGTGA................................................................................................................................................................18176.0076182010018210016000000
.............................................................................................TCCCTGAGACCCTAACTTGTGAAA..............................................................................................................................................................24168.0068223011001710311000000
..............................................................................................CCCTGAGACCCTAACTTGTGAC...............................................................................................................................................................22165.00658201143613000000000
................................................................................................CTGAGACCCTAACTTGTGA................................................................................................................................................................19161.0061720000980035000000
.............................................................................................TCCCTGAGACCCTAACTTGTGT................................................................................................................................................................22155.00551110190097003104000
....................................................................................................................................ACAAGTTTTGATCTCCGGTAC..........................................................................................................................21146.00463610000000000000000
...................................................................................................................................CACAAGTTTTGATCTCCGGTAT..........................................................................................................................22142.0042133001455000008003
.............................................................................................TCCCTGAGACCCTAACTTGTGAT...............................................................................................................................................................23141.00412301000178000001000
....................................................................................................................................ACAAGTTTTGATCTCCGGTATA.........................................................................................................................22138.0038152010067000016000
...............................................................................................CCTGAGACCCTAACTTGTG.................................................................................................................................................................19135.0035122050375010000000
....................................................................................................................................ACAAGTTTTGATCTCCGG.............................................................................................................................18135.0035800091611000000000
.............................................................................................TCCCTGAGACCCTAACTTGTT.................................................................................................................................................................21135.0035000290024000000000
.............................................................................................TCCCTGAGACCCTAACTTGA..................................................................................................................................................................20134.00343105001312000000000
..............................................................................................CCCTGAGACCCTAACTTGTGAA...............................................................................................................................................................22131.0031202270000000000000
.................................................................................................................................TTCACAAGTTTTGATCTCCGGTAT..........................................................................................................................24130.0030145011400000005000
..................................................................................................................................TCACAAGTTTTGATCTCCGGTA...........................................................................................................................22129.0029540001411000004000
.............................................................................................TCCCTGAGACCCTAACTTGTGACG..............................................................................................................................................................24128.0028253000000000000000
..................................................................................................................................TCACAAGTTTTGATCTCCGG.............................................................................................................................20127.0027181001700000000000
....................................................................................................................................ACAAGTTTTGATCTCCGGT............................................................................................................................19127.0027103004413001001000
.............................................................................................TCCCTGAGACCCTAACT.....................................................................................................................................................................17124.0024000000120021000000
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTTTAAT........................................................................................................................................................30123.00230000001310000000000
..............................................................................................CCCTGAGACCCTAACTTGTGACT..............................................................................................................................................................23120.002081020531000000000
............................................................................................TTCCCTGAGACCCTAACTTGTGA................................................................................................................................................................23120.0020100140140000000000
.............................................................................................TCCCTGAGACCCTAACTTGTGAAC..............................................................................................................................................................24119.0019181000000000000000
..............................................................................................CCCTGAGACCCTAACTTGT..................................................................................................................................................................19119.001940090600000000000
.............................................................................................TCCCTGAGACCCTAAC......................................................................................................................................................................16118.001800000071009001000
..................................................................................................................................TCACAAGTTTTGATCTCCG..............................................................................................................................19117.001760002900000000000
.............................................................................................TCCCTGAGACCCTAACTTGTGC................................................................................................................................................................22115.001540000055001000000
..................................................................................................................................TCACAAGTTTTGATCTCCGGC............................................................................................................................21115.0015132000000000000000
..............................................................................................CCCTGAGACCCTAACTTGTGG................................................................................................................................................................21114.001490050000000000000
.............................................................................................TCCCTGAGACCCTAACTTGTGAG...............................................................................................................................................................23114.001464100020001000000
.............................................................................................TCCCTGAGACCCTAACTTGTA.................................................................................................................................................................21114.001421010044001001000
..................................................................................................................................TCACAAGTTTTGATCTCC...............................................................................................................................18114.001400006800000000000
.............................................................................................TCCCTGAGACCCTAACTTGG..................................................................................................................................................................20113.0013130000000000000000
..................................................................................................................................TCACAAGTTTTGATCTCCGGG............................................................................................................................21113.0013121000000000000000
..................................................................................................GAGACCCTAACTTGTGA................................................................................................................................................................17113.0013000000210010000000
.....................................................................................................................................CAAGTTTTGATCTCCGGTAT..........................................................................................................................20113.001343040010000001000
..............................................................................................CCCTGAGACCCTAACTTG...................................................................................................................................................................18112.001240010700000000000
....................................................................................................GACCCTAACTTGTGA................................................................................................................................................................15110.001000000028000000000
................................................................................................CTGAGACCCTAACTTGTGACT..............................................................................................................................................................2119.00942000120000000000
................................................................................................CTGAGACCCTAACTTGTG.................................................................................................................................................................1819.00961000100001000000
.................................................................................................TGAGACCCTAACTTGTGAC...............................................................................................................................................................1918.00852000100000000000
.................................................................................................TGAGACCCTAACTTGTG.................................................................................................................................................................1718.00800000044000000000
..................................................................................................................................TCACAAGTTTTGATCTCCGGTAC..........................................................................................................................2318.00871000000000000000
.................................................................................................................................TTCACAAGTTTTGATCTCCGGT............................................................................................................................2218.00861000001000000000
....................................................................................................................................ACAAGTTTTGATCTCCGGTATC.........................................................................................................................2217.00751000010000000000
.............................................................................................TCCCTGAGACCCTAACTTGAA.................................................................................................................................................................2117.00760010000000000000
.............................................................................................TCCCTGAGACCCTAACTTGC..................................................................................................................................................................2017.00770000000000000000
...............................................................................................CCTGAGACCCTAACTTGT..................................................................................................................................................................1816.00620000000004000000
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTTTAA.........................................................................................................................................................2916.00600000042000000000
...................................................................................................AGACCCTAACTTGTGA................................................................................................................................................................1616.00600000014001000000
.................................................................................................................................TTCACAAGTTTTGATCTCC...............................................................................................................................1915.00500003200000000000
....................................................................................................................................ACAAGTTTTGATCTCCGGTAA..........................................................................................................................2115.00500000021000011000
.......................................................................................................................................AGTTTTGATCTCCGGTAT..........................................................................................................................1815.00550000000000000000
....................................................................................................................................ACAAGTTTTGATCTCCGGTATAA........................................................................................................................2315.00521000001000001000
...............................................................................................CCTGAGACCCTAACTTGTGAC...............................................................................................................................................................2115.00500004100000000000
.............................................................................................TCCCTGAGACCCTAACTTGACT................................................................................................................................................................2215.00550000000000000000
.................................................................................................................................TTCACAAGTTTTGATCTCCGGTA...........................................................................................................................2315.00520000000000003000
......................................................................................................................................AAGTTTTGATCTCCGGTAT..........................................................................................................................1914.00412000100000000000
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTTTAATACC.....................................................................................................................................................3314.00400000040000000000
....................................................................................................................................ACAAGTTTTGATCTCC...............................................................................................................................1614.00400000004000000000
............................................................................................TTCCCTGAGACCCTAACTTGTG.................................................................................................................................................................2214.00400020011000000000
.................................................................................................................................TTCACAAGTTTTGATCTCCGG.............................................................................................................................2114.00430000100000000000
....................................................................................................................................ACAAGTTTTGATCTCCGGTAG..........................................................................................................................2114.00422000000000000000
.............................................................................................TCCCTGAGACCCTAA.......................................................................................................................................................................1514.00400000002002000000
...............................................................................................CCTGAGACCCTAACTTGTGACT..............................................................................................................................................................2214.00420020000000000000
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTG............................................................................................................................................................2614.00440000000000000000
....................................................................................................................................ACAAGTTTTGATCTCCGGTG...........................................................................................................................2013.00312000000000000000
.............................................................................................TCCCTGAGACCCTAACTTGTGACA..............................................................................................................................................................2413.00310010010000000000
...................................................................................................................................CACAAGTTTTGATCTCCGGTA...........................................................................................................................2113.00300000300000000000
...............................................................................................CCTGAGACCCTAACTTGTGAA...............................................................................................................................................................2113.00300020000000001000
...............................................................................................................................GTTTCACAAGTTTTGATCTCCGGTAT..........................................................................................................................2613.00302010000000000000
.................................................................................................TGAGACCCTAACTTGTGACT..............................................................................................................................................................2013.00330000000000000000
................................................................................................................................TTTCACAAGTTTTGATCTCCGGTAT..........................................................................................................................2513.00320000100000000000
................................................................................................................................TTTCACAAGTTTTGATCTCCGG.............................................................................................................................2213.00311000001000000000
.............................................................................................TCCCTGAGACCCTAACTTGTGAAAA.............................................................................................................................................................2513.00310000000000002000
................................................................................................CTGAGACCCTAACTTGTGAC...............................................................................................................................................................2013.00300000200001000000
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTTTAATA.......................................................................................................................................................3113.00300000030000000000
..................................................................................................GAGACCCTAACTTGT..................................................................................................................................................................1513.00300000000003000000
............................................................................................TTCCCTGAGACCCTAACTTGTGAC...............................................................................................................................................................2413.00300002100000000000
.............................................................................................TCCCTGAGACCCTAACTTGTC.................................................................................................................................................................2113.00300010011000000000
....................................................................................................................................ACAAGTTTTGATCTCCGGG............................................................................................................................1912.00220000000000000000
....................................................................................................................................ACAAGTTTTGATCTCCGGTT...........................................................................................................................2012.00200000000000002000
..................................................................................................................................TCACAAGTTTTGATCTCCGGTAG..........................................................................................................................2312.00211000000000000000
.............................................................................................TCCCTGAGACCCTAACTTGTTT................................................................................................................................................................2212.00200010000001000000
.................................................................................................TGAGACCCTAACTTGTGACTT.............................................................................................................................................................2112.00220000000000000000
...........................................................................................ATTCCCTGAGACCCTAACTTGTGA................................................................................................................................................................2412.00200020000000000000
.............................................................................................TCCCTGAGACCCTAACTTGTGACTC.............................................................................................................................................................2512.00220000000000000000
................................................................................................CTGAGACCCTAACTTGTGG................................................................................................................................................................1912.00220000000000000000
..................................................................................................................................TCACAAGTTTTGATCTCCGGTT...........................................................................................................................2212.00220000000000000000
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTC............................................................................................................................................................2612.00220000000000000000
................................................................................................CTGAGACCCTAACTTGTGATCC.............................................................................................................................................................2212.00200000000000002000
droSec2
A----------------------------------------------AATATTGGCATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAAAAAA---------------------A---TAA-------GGCAAAGACGAA--------------------------------------------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.............................................................................................TCCCTGAGACCCTAACTTGTGA................................................................................................................................................................22164150.00641503416926093727335
.............................................................................................TCCCTGAGACCCTAACTTGTG.................................................................................................................................................................21116785.0016785712047179187
.............................................................................................TCCCTGAGACCCTAACTTGT..................................................................................................................................................................20113276.00132765863531812319
..............................................................................................CCCTGAGACCCTAACTTGTGA................................................................................................................................................................2112895.00289528694022
.............................................................................................TCCCTGAGACCCTAACTTGTGT................................................................................................................................................................2211339.0013391607801101
.............................................................................................TCCCTGAGACCCTAACTTGTGAA...............................................................................................................................................................2311109.001109636430430
.............................................................................................TCCCTGAGACCCTAACTTG...................................................................................................................................................................191644.0064418510458
..............................................................................................CCCTGAGACCCTAACTTGTG.................................................................................................................................................................201599.00599594005
....................................................................................................................................ACAAGTTTTGATCTCCGGTAT..........................................................................................................................211485.00485952140176
...............................................................................................CCTGAGACCCTAACTTGTGA................................................................................................................................................................201356.0035695180243
.............................................................................................TCCCTGAGACCCTAACTTGTGACT..............................................................................................................................................................241275.002751844087
.............................................................................................TCCCTGAGACCCTAACTTGA..................................................................................................................................................................201197.001971096082
.............................................................................................TCCCTGAGACCCTAACTTGTGAC...............................................................................................................................................................231140.001401163021
.............................................................................................TCCCTGAGACCCTAACTTGTT.................................................................................................................................................................211129.00129993027
...............................................................................................CCTGAGACCCTAACTTGTG.................................................................................................................................................................191127.00127253099
...............................................................................................CCTGAGACCCTAACTTGT..................................................................................................................................................................18197.009701096
.............................................................................................TCCCTGAGACCCTAACTTGTGAT...............................................................................................................................................................23197.0097434050
..................................................................................................................................TCACAAGTTTTGATCTCCGGTAT..........................................................................................................................23167.00672518024
.............................................................................................TCCCTGAGACCCTAACTTGTGAAA..............................................................................................................................................................24158.0058163039
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTT............................................................................................................................................................26154.0054431010
.............................................................................................TCCCTGAGACCCTAACTTGTGG................................................................................................................................................................22154.0054174033
.............................................................................................TCCCTGAGACCCTAACTTGTGACTT.............................................................................................................................................................25150.0050361013
..............................................................................................CCCTGAGACCCTAACTTGT..................................................................................................................................................................19149.004942007
..............................................................................................CCCTGAGACCCTAACTTGTGAA...............................................................................................................................................................22148.004848000
.............................................................................................TCCCTGAGACCCTAACTTGTGC................................................................................................................................................................22144.0044101033
................................................................................................CTGAGACCCTAACTTGTGA................................................................................................................................................................19136.0036211104
............................................................................................TTCCCTGAGACCCTAACTTGTGA................................................................................................................................................................23132.003231001
....................................................................................................................................ACAAGTTTTGATCTCCGGTATT.........................................................................................................................22130.003081408
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTTT...........................................................................................................................................................27127.002719206
.............................................................................................TCCCTGAGACCCTAACTT....................................................................................................................................................................18127.0027112014
.............................................................................................TCCCTGAGACCCTAACTTGC..................................................................................................................................................................20124.002412021
.............................................................................................TCCCTGAGACCCTAACTTGTC.................................................................................................................................................................21123.002391013
.............................................................................................TCCCTGAGACCCTAACTTGTA.................................................................................................................................................................21122.002290013
.............................................................................................TCCCTGAGACCCTAACTTGTGTT...............................................................................................................................................................23122.002216015
.............................................................................................TCCCTGAGACCCTAACTTGTGAG...............................................................................................................................................................23122.0022101011
..................................................................................................................................TCACAAGTTTTGATCTCCGGT............................................................................................................................21121.002135013
..............................................................................................CCCTGAGACCCTAACTTGTGAC...............................................................................................................................................................22116.001615001
..............................................................................................CCCTGAGACCCTAACTTG...................................................................................................................................................................18116.001616000
..............................................................................................CCCTGAGACCCTAACTTGTGT................................................................................................................................................................21116.001615001
.................................................................................................TGAGACCCTAACTTGTGA................................................................................................................................................................18116.001611104
..............................................................................................CCCTGAGACCCTAACTTGTGG................................................................................................................................................................21115.001515000
..............................................................................................CCCTGAGACCCTAACTTGTGACT..............................................................................................................................................................23114.001414000
..............................................................................................CCCTGAGACCCTAACTTGA..................................................................................................................................................................19114.001414000
...................................................................................................................................CACAAGTTTTGATCTCCGGTAT..........................................................................................................................22114.00146206
.....................................................................................................................................CAAGTTTTGATCTCCGGTAT..........................................................................................................................20114.001411300
................................................................................................CTGAGACCCTAACTTGTG.................................................................................................................................................................18113.00137006
....................................................................................................................................ACAAGTTTTGATCTCCGGTATA.........................................................................................................................22113.00136502
....................................................................................................................................ACAAGTTTTGATCTCCGGTA...........................................................................................................................20111.00115006
.............................................................................................TCCCTGAGACCCTAACTGA...................................................................................................................................................................1929.001823013
.............................................................................................TCCCTGAGACCCTAACTTTGA.................................................................................................................................................................2129.001810008
.............................................................................................TCCCTGAGACCCTAACTTGTTT................................................................................................................................................................2219.0099000
............................................................................................TTCCCTGAGACCCTAACTTGTG.................................................................................................................................................................2218.0088000
.................................................................................................................................TTCACAAGTTTTGATCTCCGGTAT..........................................................................................................................2418.0085102
..................................................................................................................................TCACAAGTTTTGATCTCCGGTA...........................................................................................................................2217.0073103
.............................................................................................TCCCTGAGACCCTAACTTGTGTA...............................................................................................................................................................2317.0073103
.............................................................................................TCCCTGAGACCCTAACTTGG..................................................................................................................................................................2016.0060006
.............................................................................................TCCCTGAGACCCTAACTTGTGACA..............................................................................................................................................................2416.0064002
...............................................................................................CCTGAGACCCTAACTTGTGT................................................................................................................................................................2016.0060006
...............................................................................................CCTGAGACCCTAACTTGTGAA...............................................................................................................................................................2115.0053002
.............................................................................................TCCCTGAGACCCTAACTTTG..................................................................................................................................................................2015.0054001
.............................................................................................TCCCTGAGACCCTAACTTT...................................................................................................................................................................1914.0041003
.................................................................................................................................TTCACAAGTTTTGATCTCCGGT............................................................................................................................2214.0040004
..................................................................................................................................TCACAAGTTTTGATCTCCGG.............................................................................................................................2014.0041003
..............................................................................................CCCTGAGACCCTAACTTGTT.................................................................................................................................................................2013.0033000
....................................................................................................................................ACAAGTTTTGATCTCCGGT............................................................................................................................1913.0032001
.............................................................................................TCCCTGAGACCCTAACTTGACT................................................................................................................................................................2213.0033000
..............................................................................................CCCTGAGACCCTAACTTGTGACTTTT...........................................................................................................................................................2613.0033000
................................................................................................CTGAGACCCTAACTTGTGACTTT............................................................................................................................................................2313.0033000
..............................................................................................CCCTGAGACCCTAACTTGTGACTTT............................................................................................................................................................2513.0033000
.............................................................................................TCCCTGAGACCCTAACTG....................................................................................................................................................................1813.0033000
.............................................................................................TCCCTGAGACCCTAACTTAA..................................................................................................................................................................2013.0032001
..............................................................................................CCCTGAGACCCTAACTTGTGAT...............................................................................................................................................................2213.0033000
..............................................................................................CCCTGAGACCCTAACTTGTGACTT.............................................................................................................................................................2413.0033000
droYak3
A----------------------------------------------AATATTGGCATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAAAAAA-------------------------TAA-------GGCAAAAAAGAAA-------------------------------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.............................................................................................TCCCTGAGACCCTAACTTGTGA................................................................................................................................................................22180641.008064114505678935882071364243801269
.............................................................................................TCCCTGAGACCCTAACTTGTG.................................................................................................................................................................21114878.0014878361101558117022574700007
..............................................................................................CCCTGAGACCCTAACTTGTGA................................................................................................................................................................2114901.004901104882003600000
.............................................................................................TCCCTGAGACCCTAACTTGT..................................................................................................................................................................2013102.0031024094301658115433000273
.............................................................................................TCCCTGAGACCCTAACTTGTGAA...............................................................................................................................................................2311690.0016902671176007316760010
..............................................................................................CCCTGAGACCCTAACTTGTG.................................................................................................................................................................201898.008984892001100000
.............................................................................................TCCCTGAGACCCTAACTTGTGG................................................................................................................................................................221526.0052633216100131910000
.............................................................................................TCCCTGAGACCCTAACTTGTGACT..............................................................................................................................................................241498.0049830715700112300000
....................................................................................................................................ACAAGTTTTGATCTCCGGTAT..........................................................................................................................211417.00417196702027453904340
.............................................................................................TCCCTGAGACCCTAACTTGTGC................................................................................................................................................................221402.00402039003532710000
.............................................................................................TCCCTGAGACCCTAACTTGTGT................................................................................................................................................................221384.003843159005416350000
...............................................................................................CCTGAGACCCTAACTTGTGA................................................................................................................................................................201369.00369322300498860000
.............................................................................................TCCCTGAGACCCTAACTTGTGAC...............................................................................................................................................................231259.00259991381021810000
.............................................................................................TCCCTGAGACCCTAACTTG...................................................................................................................................................................191197.00197538420203510002
.............................................................................................TCCCTGAGACCCTAACTTGTGACTT.............................................................................................................................................................251193.0019315925003510000
..............................................................................................CCCTGAGACCCTAACTTGTGAA...............................................................................................................................................................221119.001190119000000000
..................................................................................................................................TCACAAGTTTTGATCTCCGGTAT..........................................................................................................................231107.0010774900311100000
............................................................................................TTCCCTGAGACCCTAACTTGTGA................................................................................................................................................................23180.0080080000000000
..............................................................................................CCCTGAGACCCTAACTTGT..................................................................................................................................................................19179.0079079000000000
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTT............................................................................................................................................................26174.00744824000200000
.............................................................................................TCCCTGAGACCCTAACTTGTGAT...............................................................................................................................................................23172.00722530061100000
....................................................................................................................................ACAAGTTTTGATCTCCGGTATT.........................................................................................................................22170.00705311000240000
...............................................................................................CCTGAGACCCTAACTTGTG.................................................................................................................................................................19161.006113000131700000
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTTT...........................................................................................................................................................27161.00613623002000000
................................................................................................CTGAGACCCTAACTTGTGA................................................................................................................................................................19154.0054246001500000
.............................................................................................TCCCTGAGACCCTAACTTGTGACC..............................................................................................................................................................24138.0038380000000000
.................................................................................................TGAGACCCTAACTTGTGA................................................................................................................................................................18134.0034723000400000
.............................................................................................TCCCTGAGACCCTAACTTGTGAAA..............................................................................................................................................................24133.0033520002600000
.............................................................................................TCCCTGAGACCCTAACTTGA..................................................................................................................................................................20128.0028125000110000
.............................................................................................TCCCTGAGACCCTAACTTGTT.................................................................................................................................................................21126.0026050091200000
.............................................................................................TCCCTGAGACCCTAACTT....................................................................................................................................................................18120.0020015000300002
.............................................................................................TCCCTGAGACCCTAACTTGTGAG...............................................................................................................................................................23118.0018115000110000
.................................................................................................................................TTCACAAGTTTTGATCTCCGGTAT..........................................................................................................................24117.0017111000410000
..............................................................................................CCCTGAGACCCTAACTTGTGAC...............................................................................................................................................................22116.0016511000000000
....................................................................................................................................ACAAGTTTTGATCTCCGGTA...........................................................................................................................20116.001684000040000
..............................................................................................CCCTGAGACCCTAACTTGTGACT..............................................................................................................................................................23116.0016115000000000
.............................................................................................TCCCTGAGACCCTAACTTGC..................................................................................................................................................................20115.001540101900000
..............................................................................................CCCTGAGACCCTAACTTGTGT................................................................................................................................................................21114.0014014000000000
............................................................................................TTCCCTGAGACCCTAACTTGTG.................................................................................................................................................................22114.0014014000000000
...............................................................................................CCTGAGACCCTAACTTGT..................................................................................................................................................................18112.001202001810000
................................................................................................CTGAGACCCTAACTTGTG.................................................................................................................................................................18110.001017000200000
.............................................................................................TCCCTGAGACCCTAACTTGTC.................................................................................................................................................................21110.001002003500000
...............................................................................................CCTGAGACCCTAACTTGTGAA...............................................................................................................................................................21110.001017000200000
.............................................................................................TCCCTGAGACCCTAACTTGTA.................................................................................................................................................................2119.00901005300000
....................................................................................................................................ACAAGTTTTGATCTCCGGTATA.........................................................................................................................2219.00972000000000
...................................................................................................................................CACAAGTTTTGATCTCCGGTAT..........................................................................................................................2219.00913001220000
.............................................................................................TCCCTGAGACCCTAACTTGTGTA...............................................................................................................................................................2318.00805000300000
....................................................................................................................................ACAAGTTTTGATCTCCGGTAC..........................................................................................................................2117.00760000100000
.............................................................................................TCCCTGAGACCCTAACTTGG..................................................................................................................................................................2017.00740000300000
..................................................................................................................................TCACAAGTTTTGATCTCCGGTA...........................................................................................................................2217.00750000110000
.............................................................................................TCCCTGAGACCCTAACTTGTGACG..............................................................................................................................................................2417.00752000000000
.............................................................................................TCCCTGAGACCCTAACTTGTTC................................................................................................................................................................2217.00700000700000
..................................................................................................................................TCACAAGTTTTGATCTCCGGT............................................................................................................................2116.00641000100000
.....................................................................................................................................CAAGTTTTGATCTCCGGTAT..........................................................................................................................2016.00606000000000
..............................................................................................CCCTGAGACCCTAACTTGTGG................................................................................................................................................................2116.00633000000000
.............................................................................................TCCCTGAGACCCTAACTTGTGGA...............................................................................................................................................................2316.00605000010000
.............................................................................................TCCCTGAGACCCTAACTTGTGTT...............................................................................................................................................................2316.00605000100000
..............................................................................................CCCTGAGACCCTAACTTG...................................................................................................................................................................1815.00505000000000
.............................................................................................TCCCTGAGACCCTAACTTGTGCA...............................................................................................................................................................2315.00500003200000
.............................................................................................TCCCTGAGACCCTAACTTGTGAAC..............................................................................................................................................................2415.00540000100000
...........................................................................................ATTCCCTGAGACCCTAACTTGTG.................................................................................................................................................................2315.00505000000000
.................................................................................................................................TTCACAAGTTTTGATCTCCGGT............................................................................................................................2214.00430000100000
..............................................................................................CCCTGAGACCCTAACTTGTGAT...............................................................................................................................................................2214.00404000000000
...........................................................................................ATTCCCTGAGACCCTAACTTGTGA................................................................................................................................................................2414.00404000000000
droEre2
A---------GTATGTAAATGCAAC----------CGGGCATATGTAAATATTGGCATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAAAAAA-------------------------TAA-------GGCAAAAACAAAA-------------------------------------------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.............................................................................................TCCCTGAGACCCTAACTTGTGA................................................................................................................................................................221130501.00130501668891210492327615032618
.............................................................................................TCCCTGAGACCCTAACTTGTG.................................................................................................................................................................21129445.00294451399832179231612722225
.............................................................................................TCCCTGAGACCCTAACTTGT..................................................................................................................................................................20114637.001463786505920292102462642
..............................................................................................CCCTGAGACCCTAACTTGTGA................................................................................................................................................................2115582.00558255120404611
.............................................................................................TCCCTGAGACCCTAACTTGTGAA...............................................................................................................................................................2312020.002020128101040266072
..............................................................................................CCCTGAGACCCTAACTTGTG.................................................................................................................................................................2011247.001247120201002123
.............................................................................................TCCCTGAGACCCTAACTTGTGT................................................................................................................................................................221919.009191861780216330
.............................................................................................TCCCTGAGACCCTAACTTG...................................................................................................................................................................191768.0076826402409331140
...............................................................................................CCTGAGACCCTAACTTGTGA................................................................................................................................................................201746.007462100600104660
....................................................................................................................................ACAAGTTTTGATCTCCGGTAT..........................................................................................................................211713.0071311601303192650
.............................................................................................TCCCTGAGACCCTAACTTGTGACT..............................................................................................................................................................241383.003832750803970
.............................................................................................TCCCTGAGACCCTAACTTGA..................................................................................................................................................................201359.0035922200051320
.............................................................................................TCCCTGAGACCCTAACTTGTT.................................................................................................................................................................211226.002261720800460
.............................................................................................TCCCTGAGACCCTAACTTGTGAC...............................................................................................................................................................231218.002181790802290
...............................................................................................CCTGAGACCCTAACTTGTG.................................................................................................................................................................191204.0020436015021510
.............................................................................................TCCCTGAGACCCTAACTTGTGC................................................................................................................................................................221187.0018719014002260
..............................................................................................CCCTGAGACCCTAACTTGT..................................................................................................................................................................191156.001565902001382
.............................................................................................TCCCTGAGACCCTAACTTGTGAT...............................................................................................................................................................231147.001475601105750
..............................................................................................CCCTGAGACCCTAACTTGTGAA...............................................................................................................................................................221124.00124123000010
.............................................................................................TCCCTGAGACCCTAACTTGTGG................................................................................................................................................................221116.00116430904600
................................................................................................CTGAGACCCTAACTTGTGA................................................................................................................................................................191113.001133708011570
.............................................................................................TCCCTGAGACCCTAACTTGTGACTT.............................................................................................................................................................251102.00102610800330
...............................................................................................CCTGAGACCCTAACTTGT..................................................................................................................................................................181100.0010020601865
............................................................................................TTCCCTGAGACCCTAACTTGTGA................................................................................................................................................................23169.006969000000
.............................................................................................TCCCTGAGACCCTAACTTGTGAAA..............................................................................................................................................................24167.0067300403300
.............................................................................................TCCCTGAGACCCTAACTTGTA.................................................................................................................................................................21163.0063320500260
..................................................................................................................................TCACAAGTTTTGATCTCCGGTAT..........................................................................................................................23160.00601902011253
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTT............................................................................................................................................................26156.0056320401190
.............................................................................................TCCCTGAGACCCTAACTT....................................................................................................................................................................18153.00531300011029
................................................................................................CTGAGACCCTAACTTGT..................................................................................................................................................................17146.004600000046
.............................................................................................TCCCTGAGACCCTAACTTGTGAG...............................................................................................................................................................23143.0043210400180
.................................................................................................TGAGACCCTAACTTGTGA................................................................................................................................................................18137.0037170103160
....................................................................................................................................ACAAGTTTTGATCTCCGGTATT.........................................................................................................................22135.0035901015100
.............................................................................................TCCCTGAGACCCTAACTTGTGACTTTT...........................................................................................................................................................27131.0031200001100
................................................................................................CTGAGACCCTAACTTGTG.................................................................................................................................................................18129.002980003180
.............................................................................................TCCCTGAGACCCTAACTTGTC.................................................................................................................................................................21126.002615010280
..............................................................................................CCCTGAGACCCTAACTTGTGG................................................................................................................................................................21123.002323000000
..............................................................................................CCCTGAGACCCTAACTTG...................................................................................................................................................................18123.002323000000
....................................................................................................................................ACAAGTTTTGATCTCCGGTA...........................................................................................................................20122.002220204140
..............................................................................................CCCTGAGACCCTAACTTGTGAC...............................................................................................................................................................22119.001916000030
...................................................................................................................................CACAAGTTTTGATCTCCGGTAT..........................................................................................................................22118.00187000470
..............................................................................................CCCTGAGACCCTAACTTGTGT................................................................................................................................................................21118.001818000000
.....................................................................................................................................CAAGTTTTGATCTCCGGTAT..........................................................................................................................20117.001715000110
.............................................................................................TCCCTGAGACCCTAACTTGC..................................................................................................................................................................20116.001600000151
............................................................................................TTCCCTGAGACCCTAACTTGTG.................................................................................................................................................................22116.001616000000
....................................................................................................................................ACAAGTTTTGATCTCCGGTATA.........................................................................................................................22115.001500001140
..............................................................................................CCCTGAGACCCTAACTTGA..................................................................................................................................................................19115.001515000000
.............................................................................................TCCCTGAGACCCTAACTTTGA.................................................................................................................................................................21115.001514000010
..............................................................................................CCCTGAGACCCTAACTTGTGACT..............................................................................................................................................................23114.001414000000
.................................................................................................................................TTCACAAGTTTTGATCTCCGGTAT..........................................................................................................................24113.00132000650
.............................................................................................TCCCTGAGACCCTAACTTGTTT................................................................................................................................................................22113.001312010000
.............................................................................................TCCCTGAGACCCTAACTTGG..................................................................................................................................................................20112.00124020033
........................................................................................................................AATACCAGTTTCACAAGTTTTGATCTCCGG.............................................................................................................................30111.001100000011
.............................................................................................TCCCTGAGACCCTAACTGA...................................................................................................................................................................19210.502140000170
.................................................................................................TGAGACCCTAACTTGT..................................................................................................................................................................16110.001000000010
...........................................................................................ATTCCCTGAGACCCTAACTTGTGA................................................................................................................................................................2419.0099000000
...............................................................................................CCTGAGACCCTAACTTGTGAA...............................................................................................................................................................2118.0083010040
..............................................................................................CCCTGAGACCCTAACTTGTGAT...............................................................................................................................................................2218.0088000000
....................................................................................................................................ACAAGTTTTGATCTCCGG.............................................................................................................................1818.0080000080
.............................................................................................TCCCTGAGACCCTAACTTGTGTA...............................................................................................................................................................2318.0085020100
.............................................................................................TCCCTGAGACCCTAACTTTG..................................................................................................................................................................2018.0086000020
.............................................................................................TCCCTGAGACCCTAACTTA...................................................................................................................................................................1917.0077000000
.............................................................................................TCCCTGAGACCCTAACTTGTGTT...............................................................................................................................................................2316.0065010000

Generated: 10/20/2015 at 10:16 PM