ID:

dpe-mir-124

 Coordinate:

scaffold_8:2078730-2078822 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

5pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-30.6 -30.5 -30.5

Flybase annnotation

utr5 [utr5_plus_2319]; pre_miRNA [Dper\mir-124-RM]; miRNA [Dper\miR-124-RA]

No Repeatable elements found

Sense Strand Reads

TATTCCCGTGGTCCCGCCTTGTATGGGGGATCCATTTTTCTCAGTGCTCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGGACGAAACTCTACTATCAAAAACAGCAAACGACGCCAAAAGTGTTTAAGAAAATGTGAAT

********************************************************....(((((..(((.((((((.((((((..((((.((((.........))))))))..)))))).)))))).))).))))).....*************************************************** 		Read size # Mismatch Hit Count Total Norm Total V057

head

 V050

head

 V042

embryo

 M042

female body

 V111

male body		 M021

embryo
..........................................................................................................TAAGGCACGCGGTGAATGCCA.................................................................. 21 0 1 62853.00 62853 31672 29718 499 498 458 8
..........................................................................................................TAAGGCACGCGGTGAATGCC................................................................... 20 0 1 14609.00 14609 9033 5244 58 53 220 1
..........................................................................................................TAAGGCACGCGGTGAATGCCAAG................................................................ 23 0 1 10994.00 10994 5365 4567 509 347 181 25
..........................................................................................................TAAGGCACGCGGTGAATGCCAA................................................................. 22 0 1 4506.00 4506 1340 2796 259 58 38 15
..........................................................................................................TAAGGCACGCGGTGAATGCCAAGT............................................................... 24 1 1 955.00 955 575 330 12 17 21 0
..........................................................................................................TAAGGCACGCGGTGAATGC.................................................................... 19 0 1 889.00 889 599 212 1 22 55 0
..........................................................................................................TAAGGCACGCGGTGAATGCCT.................................................................. 21 1 1 685.00 685 511 160 0 9 5 0
..........................................................................................................TAAGGCACGCGGCGAATGCCA.................................................................. 21 1 1 485.00 485 327 158 0 0 0 0
.......................................................................TGGTATCCACTGTAGGCCTATATG.................................................................................................. 24 0 1 482.00 482 227 152 62 14 2 25
..........................................................................................................TAAGGCACGCGGTGAATGCCC.................................................................. 21 1 1 473.00 473 278 193 2 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAAGA............................................................... 24 0 1 389.00 389 223 139 4 11 12 0
..........................................................................................................TAAGGCACGCGGGGAATGCCA.................................................................. 21 1 1 372.00 372 319 48 2 2 1 0
..........................................................................................................TAAGGCACGCGGTGCATGCCA.................................................................. 21 1 1 316.00 316 166 143 7 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCG.................................................................. 21 1 1 251.00 251 188 61 1 1 0 0
...........................................................................................................AAGGCACGCGGTGAATGCCA.................................................................. 20 0 1 247.00 247 121 83 2 41 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCACG................................................................ 23 1 1 235.00 235 154 76 5 0 0 0
..........................................................................................................TAAGGCACGCGGTGAACGCCA.................................................................. 21 1 1 221.00 221 143 73 4 1 0 0
..........................................................................................................TAAGGCACGCGGAGAATGCCA.................................................................. 21 1 1 203.00 203 150 53 0 0 0 0
........................................................................GGTATCCACTGTAGGCCTATATG.................................................................................................. 23 0 1 192.00 192 9 11 33 3 1 135
..........................................................................................................TAAGGCACGCGGTGAATGACA.................................................................. 21 1 1 171.00 171 71 97 3 0 0 0
..........................................................................................................TAACGCACGCGGTGAATGCCA.................................................................. 21 1 1 153.00 153 123 29 0 0 1 0
..........................................................................................................TAAGGCACGCGGTGGATGCCA.................................................................. 21 1 1 152.00 152 111 37 4 0 0 0
..........................................................................................................TAAGGAACGCGGTGAATGCCA.................................................................. 21 1 1 146.00 146 41 105 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGACTGCCA.................................................................. 21 1 1 130.00 130 74 55 1 0 0 0
..........................................................................................................TAAGGCACGCGGTGAAGGCCA.................................................................. 21 1 1 127.00 127 110 16 1 0 0 0
..........................................................................................................AAAGGCACGCGGTGAATGCCA.................................................................. 21 1 1 124.00 124 99 24 0 1 0 0
..........................................................................................................TAAGGCACGCGGCGAATGCC................................................................... 20 1 1 119.00 119 95 23 0 0 1 0
...........................................................................................................AAGGCACGCGGTGAATGCCAAG................................................................ 22 0 1 116.00 116 46 33 2 35 0 0
..........................................................................................................TAAGGCACGAGGTGAATGCCA.................................................................. 21 1 1 116.00 116 85 30 1 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAAA................................................................ 23 1 1 114.00 114 53 55 3 1 2 0
..........................................................................................................CAAGGCACGCGGTGAATGCCA.................................................................. 21 1 1 110.00 110 78 32 0 0 0 0
..........................................................................................................TAAGGCACGCGGGGAATGCC................................................................... 20 1 1 108.00 108 96 12 0 0 0 0
..........................................................................................................TAAGGCACGCGCTGAATGCCA.................................................................. 21 1 1 108.00 108 83 25 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATG..................................................................... 18 0 1 103.00 103 79 19 2 3 0 0
..........................................................................................................TAAGGCACGCGGTCAATGCCA.................................................................. 21 1 1 101.00 101 65 36 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAT................................................................. 22 1 1 97.00 97 53 41 1 2 0 0
..........................................................................................................TAAGGCACGCGGTGAGTGCCA.................................................................. 21 1 1 97.00 97 66 31 0 0 0 0
..........................................................................................................TAAGGCACGCGGCGAATGCCAAG................................................................ 23 1 1 96.00 96 66 29 1 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCTA.................................................................. 21 1 1 94.00 94 55 39 0 0 0 0
..........................................................................................................TAGGGCACGCGGTGAATGCCA.................................................................. 21 1 1 92.00 92 58 34 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATCCCA.................................................................. 21 1 1 90.00 90 58 28 1 1 2 0
..........................................................................................................TAAGGCACGCGGTGTATGCCA.................................................................. 21 1 1 86.00 86 65 20 1 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAC................................................................. 22 1 1 85.00 85 41 43 1 0 0 0
..........................................................................................................GAAGGCACGCGGTGAATGCCA.................................................................. 21 1 1 84.00 84 63 20 0 1 0 0
..........................................................................................................TAAGGCACGCGGTGAATACCA.................................................................. 21 1 1 82.00 82 44 38 0 0 0 0
..........................................................................................................TAAGGCAAGCGGTGAATGCCA.................................................................. 21 1 1 81.00 81 58 23 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGCATGCC................................................................... 20 1 1 79.00 79 41 38 0 0 0 0
..........................................................................................................TAAGGCACGCAGTGAATGCCA.................................................................. 21 1 1 79.00 79 27 50 1 1 0 0
..........................................................................................................TAAGGCACGCGGTAAATGCCA.................................................................. 21 1 1 78.00 78 29 49 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAAAGCCA.................................................................. 21 1 1 78.00 78 53 25 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAACGCC................................................................... 20 1 1 77.00 77 58 19 0 0 0 0
..........................................................................................................TAAGACACGCGGTGAATGCCA.................................................................. 21 1 1 75.00 75 49 26 0 0 0 0
.........................................................................................................CTAAGGCACGCGGTGAATGCCA.................................................................. 22 1 1 71.00 71 39 29 0 3 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCAA.................................................................. 21 1 1 71.00 71 22 49 0 0 0 0
..........................................................................................................TAAGGCACACGGTGAATGCCA.................................................................. 21 1 1 70.00 70 38 23 0 8 1 0
..........................................................................................................TAAGGCACGCGGTGAATGTCA.................................................................. 21 1 1 69.00 69 42 26 0 1 0 0
..........................................................................................................TAAGGTACGCGGTGAATGCCA.................................................................. 21 1 1 68.00 68 17 50 0 0 1 0
..........................................................................................................TAAGGCATGCGGTGAATGCCA.................................................................. 21 1 1 67.00 67 41 23 2 0 1 0
..........................................................................................................TAAGGCGCGCGGTGAATGCCA.................................................................. 21 1 1 67.00 67 36 31 0 0 0 0
..........................................................................................................TAAGGCACGTGGTGAATGCCA.................................................................. 21 1 1 67.00 67 54 12 0 0 1 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAAT................................................................ 23 1 1 67.00 67 43 23 0 1 0 0
..........................................................................................................TAAGGCACGCGGTGAATTCCA.................................................................. 21 1 1 66.00 66 37 28 0 0 1 0
..........................................................................................................TAAGGCACGCGGTGAATGCCCAG................................................................ 23 1 1 66.00 66 35 16 15 0 0 0
..........................................................................................................TAAGGCACGCGGAGAATGCC................................................................... 20 1 1 63.00 63 53 10 0 0 0 0
..........................................................................................................TAAGGCACGCGGCGAAGGCCA.................................................................. 21 2 1 57.00 57 42 15 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGGCA.................................................................. 21 1 1 57.00 57 41 14 2 0 0 0
..........................................................................................................TGAGGCACGCGGTGAATGCCA.................................................................. 21 1 1 55.00 55 32 23 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCATG................................................................ 23 1 1 54.00 54 51 3 0 0 0 0
..........................................................................................................TAAGGCACGCGGGGAATGCCAAG................................................................ 23 1 1 54.00 54 46 7 0 0 0 1
.......................................................................TGGTATCCACTGTAGGCCTA...................................................................................................... 20 0 1 53.00 53 30 21 0 2 0 0
..........................................................................................................TAAGGCACGCGGTGAAGGCC................................................................... 20 1 1 52.00 52 45 7 0 0 0 0
..........................................................................................................TAAGTCACGCGGTGAATGCCA.................................................................. 21 1 1 51.00 51 33 17 0 0 1 0
..........................................................................................................TAACGCACGCGGTGAATGCCT.................................................................. 21 2 1 48.00 48 38 10 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGGATGCC................................................................... 20 1 1 48.00 48 42 6 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAGG................................................................ 23 1 1 46.00 46 38 7 0 1 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAAC................................................................ 23 1 1 46.00 46 29 16 1 0 0 0
..........................................................................................................TAAAGCACGCGGTGAATGCCA.................................................................. 21 1 1 45.00 45 21 23 1 0 0 0
..........................................................................................................TAAGCCACGCGGTGAATGCCA.................................................................. 21 1 1 44.00 44 28 13 1 2 0 0
..........................................................................................................TAACGCACGCGGTGAATGCC................................................................... 20 1 1 44.00 44 42 2 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCA................................................................... 20 1 1 44.00 44 22 22 0 0 0 0
..........................................................................................................AAAGGCACGCGGTGAATGCC................................................................... 20 1 1 43.00 43 39 4 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGAC................................................................... 20 1 1 42.00 42 20 22 0 0 0 0
..........................................................................................................TAAGGGACGCGGTGAATGCCA.................................................................. 21 1 1 41.00 41 16 25 0 0 0 0
..........................................................................................................TAAGGCACGCGGAGAATGCCAAG................................................................ 23 1 1 41.00 41 30 10 0 0 1 0
..........................................................................................................TAAGGCACTCGGTGAATGCCA.................................................................. 21 1 1 40.00 40 27 9 0 4 0 0
..........................................................................................................TAAGGCACGCGGTGCATGCCAAG................................................................ 23 1 1 40.00 40 20 14 6 0 0 0
..........................................................................................................TAAGGCACGCGGTGCATGCCC.................................................................. 21 2 1 39.00 39 18 20 1 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCTAG................................................................ 23 1 1 39.00 39 34 4 1 0 0 0
...........................................................................................................AAGGCACGCGGTGAATGCC................................................................... 19 0 1 38.00 38 23 11 0 4 0 0
..........................................................................................................TAAGGCACGCGGTGAAAGCC................................................................... 20 1 1 37.00 37 28 9 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCGAG................................................................ 23 1 1 37.00 37 25 11 1 0 0 0
..........................................................................................................TAAGGCAGGCGGTGAATGCCA.................................................................. 21 1 1 36.00 36 33 3 0 0 0 0
..........................................................................................................TAAGGCACGCGGTTAATGCCA.................................................................. 21 1 1 36.00 36 26 10 0 0 0 0
..........................................................................................................TAAGGCACGCGGGGAATGCCG.................................................................. 21 2 1 36.00 36 31 5 0 0 0 0
..........................................................................................................TAATGCACGCGGTGAATGCCA.................................................................. 21 1 1 35.00 35 22 12 0 1 0 0
..........................................................................................................TAAGGCACGCGATGAATGCCA.................................................................. 21 1 1 33.00 33 21 11 0 0 1 0
..........................................................................................................TAAGGCACGCGGTGAATCCC................................................................... 20 1 1 33.00 33 23 9 1 0 0 0
..........................................................................................................TAAGGCACGCGGTGATTGCCA.................................................................. 21 1 1 33.00 33 21 12 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGTATGCC................................................................... 20 1 1 32.00 32 29 3 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGACTGCC................................................................... 20 1 1 32.00 32 22 10 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCT................................................................... 20 1 1 31.00 31 22 9 0 0 0 0
..........................................................................................................TAAGGCACGGGGTGAATGCCA.................................................................. 21 1 1 31.00 31 21 10 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAGTGCC................................................................... 20 1 1 31.00 31 21 10 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCACT................................................................ 23 2 1 31.00 31 25 6 0 0 0 0
..........................................................................................................GAAGGCACGCGGTGAATGCC................................................................... 20 1 1 30.00 30 24 6 0 0 0 0
..........................................................................................................TAAGGCACGCGGAGAACGCCA.................................................................. 21 2 1 30.00 30 26 4 0 0 0 0
..........................................................................................................TAAGGCACGCGCTGAATGCC................................................................... 20 1 1 29.00 29 24 5 0 0 0 0
..........................................................................................................TAAGGCACGCGGTAAATGCC................................................................... 20 1 1 29.00 29 12 17 0 0 0 0
..........................................................................................................TCAGGCACGCGGTGAATGCCA.................................................................. 21 1 1 28.00 28 20 8 0 0 0 0
..........................................................................................................TAAGGCACGCCGTGAATGCCA.................................................................. 21 1 1 28.00 28 18 10 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAAGC............................................................... 24 1 1 28.00 28 17 10 0 1 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCCA................................................................. 22 1 1 28.00 28 9 11 8 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGACAAG................................................................ 23 1 1 28.00 28 9 15 3 1 0 0
..........................................................................................................TACGGCACGCGGTGAATGCCA.................................................................. 21 1 1 27.00 27 21 6 0 0 0 0
..........................................................................................................TAAGGCACGCGGGGAATGACA.................................................................. 21 2 1 27.00 27 23 3 1 0 0 0
..........................................................................................................TAAGGAACGCGGTGAATGCC................................................................... 20 1 1 27.00 27 8 19 0 0 0 0
.......................................................................TGGTATCCACTGTAGGCCTATA.................................................................................................... 22 0 1 26.00 26 6 9 8 0 0 3
...........................................................................................................AAGGCACGCGGTGAATGCCAA................................................................. 21 0 1 26.00 26 7 15 0 4 0 0
..........................................................................................................TAAGGCACGCGGCGAATGCCAA................................................................. 22 1 1 26.00 26 13 11 1 1 0 0
..........................................................................................................TAAGGCACGCGGGGAAGGCCA.................................................................. 21 2 1 25.00 25 23 2 0 0 0 0
..........................................................................................................TAAGGCACGCGGTCAATGCC................................................................... 20 1 1 25.00 25 20 5 0 0 0 0
............................................................................................................AGGCACGCGGTGAATGCCA.................................................................. 19 0 1 25.00 25 14 9 0 2 0 0
..........................................................................................................TAAGGCACGAGGTGAATGCC................................................................... 20 1 1 24.00 24 17 7 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCAAAG................................................................ 23 1 1 24.00 24 9 13 2 0 0 0
..........................................................................................................CAAGGCACGCGGTGAATGCC................................................................... 20 1 1 24.00 24 19 4 1 0 0 0
..........................................................................................................TAAGGCACGCGGTGAACGCCT.................................................................. 21 2 1 24.00 24 22 2 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGGATGCCT.................................................................. 21 2 1 24.00 24 23 1 0 0 0 0
..........................................................................................................TAAGGCACGCGGGGAATGCCAA................................................................. 22 1 1 23.00 23 16 7 0 0 0 0
..........................................................................................................TAAGGCACGCGGCGGATGCCA.................................................................. 21 2 1 23.00 23 22 1 0 0 0 0
..........................................................................................................AAAGGCACGCGGGGAATGCCA.................................................................. 21 2 1 23.00 23 22 1 0 0 0 0
..........................................................................................................TAAGGCACGCAGTGAATGCC................................................................... 20 1 1 23.00 23 13 10 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCGA.................................................................. 21 1 1 23.00 23 17 5 1 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGGC................................................................... 20 1 1 23.00 23 19 4 0 0 0 0
..........................................................................................................TAAGGCACGCTGTGAATGCCA.................................................................. 21 1 1 23.00 23 16 7 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGGATGCCAAG................................................................ 23 1 1 22.00 22 12 6 4 0 0 0
............................................................................................................AGGCACGCGGTGAATGCCAAGT............................................................... 22 1 1 22.00 22 12 10 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATTCC................................................................... 20 1 1 22.00 22 17 5 0 0 0 0
..........................................................................................................TAAGGCCCGCGGTGAATGCCA.................................................................. 21 1 1 22.00 22 17 5 0 0 0 0
..........................................................................................................TAAGACACGCGGTGAATGCC................................................................... 20 1 1 22.00 22 20 2 0 0 0 0
..........................................................................................................TAAGGCGCGCGGTGAATGCC................................................................... 20 1 1 22.00 22 13 8 0 0 1 0
..........................................................................................................TAAGGCACGCGGTGCATGCCAA................................................................. 22 1 1 22.00 22 8 12 2 0 0 0
..........................................................................................................TAAGGCACGCGGTGAGTGCCAAG................................................................ 23 1 1 21.00 21 15 3 3 0 0 0
..........................................................................................................TAAGGCACGCGGCGCATGCCA.................................................................. 21 2 1 21.00 21 18 3 0 0 0 0
..........................................................................................................TAAGGCACGCGGCGAAGGCC................................................................... 20 2 1 21.00 21 19 2 0 0 0 0
..........................................................................................................TAAGGCACACGGTGAATGCC................................................................... 20 1 1 20.00 20 15 5 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATACC................................................................... 20 1 1 20.00 20 14 6 0 0 0 0
..........................................................................................................TAAGGCACGCGGAGAATGCCC.................................................................. 21 2 1 20.00 20 17 3 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAACGCCAAG................................................................ 23 1 1 20.00 20 8 12 0 0 0 0
..........................................................................................................AAAGGCACGCGGTGAATGCCC.................................................................. 21 2 1 20.00 20 18 2 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCTA................................................................. 22 1 1 20.00 20 14 5 1 0 0 0
..........................................................................................................TAAGGCATGCGGTGAATGCC................................................................... 20 1 1 19.00 19 12 7 0 0 0 0
..........................................................................................................CAAGGCACGCGGTGAATGCCAAG................................................................ 23 1 1 19.00 19 14 4 0 1 0 0
..........................................................................................................TAGGGCACGCGGTGAATGCC................................................................... 20 1 1 19.00 19 17 2 0 0 0 0
..........................................................................................................TAAGGCACGTGGTGAATGCC................................................................... 20 1 1 19.00 19 11 8 0 0 0 0
..........................................................................................................TAAGGGACGCGGTGAATGCC................................................................... 20 1 1 19.00 19 14 5 0 0 0 0
..........................................................................................................TAAGGCACACGGTGAATGCCAAG................................................................ 23 1 1 19.00 19 7 6 0 6 0 0
..........................................................................................................TAAGGCACGCGGACAATGCCA.................................................................. 21 2 1 18.00 18 15 3 0 0 0 0
..........................................................................................................TAATGCACGCGGTGAATGCCAAG................................................................ 23 1 1 18.00 18 7 6 0 1 4 0
..........................................................................................................TAAGGCACGCGGGGAATGCCC.................................................................. 21 2 1 18.00 18 13 5 0 0 0 0
.......................................................................TGGTATCCACTGTAGGCCT....................................................................................................... 19 0 1 18.00 18 15 2 0 1 0 0
..........................................................................................................TAAGGCACGCGGTGTATGCCAAG................................................................ 23 1 1 17.00 17 11 6 0 0 0 0
..........................................................................................................TAAGGAACGCGGTGAATGCCAAG................................................................ 23 1 1 17.00 17 2 15 0 0 0 0
..........................................................................................................TAAGGCAGGCGGTGAATGCC................................................................... 20 1 1 17.00 17 14 3 0 0 0 0
..........................................................................................................TAAGGCACGCGGGGAAAGCCA.................................................................. 21 2 1 17.00 17 15 2 0 0 0 0
..........................................................................................................TAAGGCACGCGTTGAATGCCA.................................................................. 21 1 1 17.00 17 9 8 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATACCAAG................................................................ 23 1 1 17.00 17 7 8 2 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGGCT.................................................................. 21 2 1 17.00 17 17 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCACGT............................................................... 24 2 1 17.00 17 7 9 0 0 1 0
..........................................................................................................TAAGGCACCCGGTGAATGCCA.................................................................. 21 1 1 17.00 17 8 5 0 4 0 0
..........................................................................................................TAAGGCACGCGGTGGATGCCC.................................................................. 21 2 1 16.00 16 14 1 1 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGTC................................................................... 20 1 1 16.00 16 14 2 0 0 0 0
..........................................................................................................TAAGGCACGCGGTAAATGCCAAG................................................................ 23 1 1 16.00 16 8 8 0 0 0 0
..........................................................................................................TAAGGCAAGCGGTGAATGCC................................................................... 20 1 1 16.00 16 12 4 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAAGTT.............................................................. 25 2 1 16.00 16 9 7 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCATT................................................................ 23 2 1 16.00 16 11 5 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCAC.................................................................. 21 2 1 16.00 16 9 7 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCTAAG................................................................ 23 1 1 16.00 16 10 6 0 0 0 0
..........................................................................................................TAACACACGCGGTGAATGCCA.................................................................. 21 2 1 16.00 16 15 1 0 0 0 0
............................................................................................................AGGCACGCGGTGAATGCCAAG................................................................ 21 0 1 15.00 15 6 6 1 2 0 0
..........................................................................................................TAAGGCACGCGGTGACTGCCAAG................................................................ 23 1 1 15.00 15 10 3 2 0 0 0
..........................................................................................................TAAGGAACGCGGTGAATGCCAA................................................................. 22 1 1 15.00 15 3 12 0 0 0 0
..........................................................................................................TAACGCACGCGGTGAATGCCAAG................................................................ 23 1 1 15.00 15 9 6 0 0 0 0
..........................................................................................................TAAGGCACGCGCTGAATGCCAAG................................................................ 23 1 1 15.00 15 12 3 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGT.................................................................... 19 1 1 14.00 14 12 2 0 0 0 0
..........................................................................................................TAAGGTACGCGGTGAATGCC................................................................... 20 1 1 14.00 14 7 6 0 0 1 0
..........................................................................................................TTAGGCACGCGGTGAATGCCA.................................................................. 21 1 1 14.00 14 11 3 0 0 0 0
..........................................................................................................GAAGGCACGCGGGGAATGCCA.................................................................. 21 2 1 14.00 14 10 4 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCGA................................................................. 22 1 1 14.00 14 9 4 1 0 0 0
.......................................................................TGGTATCCACTGTAGGCCTATAT................................................................................................... 23 0 1 14.00 14 3 10 1 0 0 0
..........................................................................................................GAAGGCACGCGGTGAATGCCAAG................................................................ 23 1 1 13.00 13 9 4 0 0 0 0
..........................................................................................................TAAGGCACGCAGTGAATGCCAAG................................................................ 23 1 1 13.00 13 5 8 0 0 0 0
..........................................................................................................TAAGGCGCGCGGTGAATGCCAAG................................................................ 23 1 1 13.00 13 10 3 0 0 0 0
..........................................................................................................TAAGGCACGCGGACAATGCC................................................................... 20 2 1 13.00 13 9 4 0 0 0 0
..........................................................................................................TAAGGCAAGCGGGGAATGCCA.................................................................. 21 2 1 13.00 13 12 1 0 0 0 0
..........................................................................................................TAAGGCACGCGGTCAATGCCAAG................................................................ 23 1 1 13.00 13 8 5 0 0 0 0
..........................................................................................................TAACGCACGCGGTAAATGCCA.................................................................. 21 2 1 13.00 13 8 5 0 0 0 0
.......................................................................TGGTATCCACTGTAGGCCTAT..................................................................................................... 21 0 1 13.00 13 6 7 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCTG.................................................................. 21 2 1 13.00 13 12 1 0 0 0 0
..........................................................................................................TAAGGCACGCGGGGGATGCCA.................................................................. 21 2 1 13.00 13 11 1 1 0 0 0
.........................................................................................................CTAAGGCACGCGGTGAATGCCAAG................................................................ 24 1 1 13.00 13 9 4 0 0 0 0
..........................................................................................................TAAGGCACGCGGTTAATGCC................................................................... 20 1 1 13.00 13 12 1 0 0 0 0
..........................................................................................................TAAGGAACGCGGAGAATGCCA.................................................................. 21 2 1 13.00 13 9 4 0 0 0 0
..........................................................................................................TAAGGCACGCGGGGAATGAC................................................................... 20 2 1 13.00 13 13 0 0 0 0 0
..........................................................................................................TAACGCACGCGGCGAATGCCA.................................................................. 21 2 1 13.00 13 9 4 0 0 0 0
..........................................................................................................TAAGGCACGCGGCGAATGCCT.................................................................. 21 2 1 13.00 13 12 1 0 0 0 0
..........................................................................................................AAAGGCACGCGGTGAATGCCAAG................................................................ 23 1 1 12.00 12 9 2 0 1 0 0
..........................................................................................................CAAGGCACGCGGTGAACGCCA.................................................................. 21 2 1 12.00 12 11 1 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGACTGCCC.................................................................. 21 2 1 12.00 12 6 6 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGCACGCCA.................................................................. 21 2 1 12.00 12 8 4 0 0 0 0
..........................................................................................................TAGGGCACGCGGTGAATGCCAAG................................................................ 23 1 1 12.00 12 8 4 0 0 0 0
..........................................................................................................TAAGGCACGCGGTCAATGCCT.................................................................. 21 2 1 12.00 12 11 1 0 0 0 0
..........................................................................................................TAAGGCACGCGGCGACTGCCA.................................................................. 21 2 1 12.00 12 10 2 0 0 0 0
..........................................................................................................TAAGGCACGCGGCGAATGCCC.................................................................. 21 2 1 12.00 12 10 2 0 0 0 0
..........................................................................................................TAAGGGACGCGGTGAATGCCT.................................................................. 21 2 1 12.00 12 11 1 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGCATGCCT.................................................................. 21 2 1 12.00 12 7 4 1 0 0 0
..........................................................................................................TAAGGCACGCGGTGAACGCCC.................................................................. 21 2 1 11.00 11 9 2 0 0 0 0
..........................................................................................................TAAGACACGCGGGGAATGCCA.................................................................. 21 2 1 11.00 11 8 3 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAAAGACA.................................................................. 21 2 1 11.00 11 7 4 0 0 0 0
..........................................................................................................TAAGGCAAGCGGCGAATGCCA.................................................................. 21 2 1 11.00 11 9 2 0 0 0 0
..........................................................................................................TAAGCCACGCGCTGAATGCCA.................................................................. 21 2 1 11.00 11 11 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGGGAACGCCA.................................................................. 21 2 1 11.00 11 7 4 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATTCCAAG................................................................ 23 1 1 11.00 11 3 8 0 0 0 0
..........................................................................................................TAACGCACGCGGTGAATGCCC.................................................................. 21 2 1 11.00 11 8 3 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGACTGCCT.................................................................. 21 2 1 11.00 11 10 1 0 0 0 0
...........................................................................................................AGGGCACGCGGTGAATGCCAAG................................................................ 22 1 1 11.00 11 7 4 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGACAA................................................................. 22 1 1 11.00 11 2 9 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGGAGGCCA.................................................................. 21 2 1 11.00 11 9 2 0 0 0 0
..........................................................................................................TAAGGCACGCGGGGAATGCCATG................................................................ 23 2 1 11.00 11 11 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTCAACGCCA.................................................................. 21 2 1 11.00 11 9 2 0 0 0 0
..........................................................................................................TAAGGCACGAGGTGAATGCCAAG................................................................ 23 1 1 11.00 11 10 1 0 0 0 0
..........................................................................................................TAAGGCACGCGGAGAATGCCAA................................................................. 22 1 1 10.00 10 8 2 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCCCG................................................................ 23 2 1 10.00 10 3 5 2 0 0 0
..........................................................................................................TAACACACGCGGTGAATGCCT.................................................................. 21 3 1 10.00 10 8 2 0 0 0 0
..........................................................................................................TAAGGCACGCGGGGAAAGCC................................................................... 20 2 1 10.00 10 9 1 0 0 0 0
..........................................................................................................AAAGGCACGCGGGGAATGCC................................................................... 20 2 1 10.00 10 10 0 0 0 0 0
.........................................................................................................CTAAGGCACGCGGTGAATGCC................................................................... 21 1 1 10.00 10 7 3 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGCATGACA.................................................................. 21 2 1 10.00 10 4 6 0 0 0 0
..........................................................................................................TAAGGCAGGCGGTGAATGCCT.................................................................. 21 2 1 10.00 10 9 1 0 0 0 0
..........................................................................................................CAAGGCACGCGGCGAATGCCA.................................................................. 21 2 1 10.00 10 8 2 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCTGG................................................................ 23 2 1 10.00 10 9 1 0 0 0 0
..........................................................................................................TAAGGCAAGCGGTGAATGCCAAG................................................................ 23 1 1 10.00 10 7 1 2 0 0 0
..........................................................................................................TAAGGCACGCGGTGATTGCC................................................................... 20 1 1 10.00 10 10 0 0 0 0 0
..........................................................................................................TATGGCACGCGGTGAATGCCA.................................................................. 21 1 1 10.00 10 6 4 0 0 0 0
..........................................................................................................TAAGGCACGCGGCGTATGCCA.................................................................. 21 2 1 10.00 10 9 1 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCCTG................................................................ 23 2 1 10.00 10 9 1 0 0 0 0
..........................................................................................................TAAGGCATGCGGTGAATGCCAAG................................................................ 23 1 1 9.00 9 2 5 1 1 0 0
..........................................................................................................TAACGCACGCGGTAAATGCC................................................................... 20 2 1 9.00 9 6 3 0 0 0 0
..........................................................................................................TAAGGCACTCGGTGAATGCC................................................................... 20 1 1 9.00 9 6 2 0 1 0 0
..........................................................................................................TAAGGCACGCGGGGAATGACG.................................................................. 21 3 1 9.00 9 9 0 0 0 0 0
..........................................................................................................TAAGGCACGCGTTGAATGCC................................................................... 20 1 1 9.00 9 7 2 0 0 0 0
..........................................................................................................TAAGGCACGCGGTAGATGCCA.................................................................. 21 2 1 9.00 9 9 0 0 0 0 0
..........................................................................................................TAACGCACGCGGTGACTGCCA.................................................................. 21 2 1 9.00 9 6 3 0 0 0 0
..........................................................................................................TAAAGCACGCGGTGAATGCC................................................................... 20 1 1 9.00 9 8 1 0 0 0 0
..........................................................................................................TAAGGCACGCGGAGCATGCCA.................................................................. 21 2 1 9.00 9 8 1 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAGTGCCAA................................................................. 22 1 1 9.00 9 4 3 2 0 0 0
..........................................................................................................TAAGGCACGCGGTGTATGCCG.................................................................. 21 2 1 9.00 9 5 3 1 0 0 0
..........................................................................................................TAAGGCACGAGGTGGATGCCA.................................................................. 21 2 1 9.00 9 8 1 0 0 0 0
..........................................................................................................TAAGGCACGGGGTGAATGCC................................................................... 20 1 1 9.00 9 8 1 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGGATGCCAA................................................................. 22 1 1 9.00 9 6 3 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAAGG............................................................... 24 1 1 9.00 9 8 1 0 0 0 0
..........................................................................................................TAAGGCACGCGGCGTTTGCCA.................................................................. 21 3 1 9.00 9 7 2 0 0 0 0
..........................................................................................................TGAGGCACGCGGTGAATGCC................................................................... 20 1 1 9.00 9 6 3 0 0 0 0
..........................................................................................................TAAGACACGCGGTGAATGCCT.................................................................. 21 2 1 9.00 9 8 1 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAG................................................................. 22 1 1 9.00 9 8 1 0 0 0 0
..........................................................................................................TAAGGCACGCGGAGAAGGCCA.................................................................. 21 2 1 9.00 9 7 2 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGCATGCCACG................................................................ 23 2 1 9.00 9 1 6 2 0 0 0
..........................................................................................................TAAGGCACGCGGCGGAGGCCA.................................................................. 21 3 3 8.33 25 22 3 0 0 0 0
........................................................................GGTATCCACTGTAGGCCTATA.................................................................................................... 21 0 1 8.00 8 4 1 1 0 0 2
...........................................................................................................AGGGCACGCGGTGAATGCCA.................................................................. 20 1 1 8.00 8 7 1 0 0 0 0
..........................................................................................................TAAGTCACGCGGTGAATGCC................................................................... 20 1 1 8.00 8 7 1 0 0 0 0
..........................................................................................................TAAGGCAGGCGGGGAATGCCA.................................................................. 21 2 1 8.00 8 8 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGATGGCCA.................................................................. 21 2 1 8.00 8 8 0 0 0 0 0
..........................................................................................................TAACGCACGCGGTGAATGCCAA................................................................. 22 1 1 8.00 8 6 2 0 0 0 0
..........................................................................................................TAAGGCACACGGTGAATGCCAA................................................................. 22 1 1 8.00 8 3 3 0 2 0 0
..........................................................................................................TAAGGCACGCGATGAATGCC................................................................... 20 1 1 8.00 8 5 3 0 0 0 0
..........................................................................................................TAAGGCACGCGGGCAATGCCA.................................................................. 21 2 1 8.00 8 7 1 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATCCCAAG................................................................ 23 1 1 8.00 8 4 3 0 0 1 0
..........................................................................................................TAAGGCACGCGGTGAATCCCAA................................................................. 22 1 1 8.00 8 4 4 0 0 0 0
..........................................................................................................CAAGGCACGCGGTGAATGCCAA................................................................. 22 1 1 8.00 8 5 3 0 0 0 0
..........................................................................................................TAAGGCACGCCGTGAATGCC................................................................... 20 1 1 8.00 8 7 1 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAAAGCCG.................................................................. 21 2 1 8.00 8 8 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAATT............................................................... 24 2 1 8.00 8 2 5 0 0 1 0
..........................................................................................................TAAGGCACGCGGTGAATGTCAAG................................................................ 23 1 1 8.00 8 6 1 1 0 0 0
...........................................................................................................AAGGCACGCGGTGAATGCCAAGT............................................................... 23 1 1 8.00 8 5 1 0 2 0 0
..........................................................................................................TAAGGCACGCGGTGAGTGCCT.................................................................. 21 2 1 8.00 8 7 1 0 0 0 0
..........................................................................................................TAAGGCACGCGGAGAAAGCCA.................................................................. 21 2 1 8.00 8 5 3 0 0 0 0
..........................................................................................................TAAGGGACGCGGTGAATGCCAAG................................................................ 23 1 1 8.00 8 3 5 0 0 0 0
..........................................................................................................TAAGGCACGCGGTCAACGCC................................................................... 20 2 1 8.00 8 7 1 0 0 0 0
..........................................................................................................GAAGGCACGCGGCGAATGCCA.................................................................. 21 2 1 8.00 8 6 2 0 0 0 0
.......................................................................TGGTATCCACTGTAGGCC........................................................................................................ 18 0 1 8.00 8 7 1 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGCATTCCA.................................................................. 21 2 1 8.00 8 6 2 0 0 0 0
..........................................................................................................TAAGGCACGCGGAGAATGCCT.................................................................. 21 2 1 8.00 8 8 0 0 0 0 0
..........................................................................................................TAAGGCTCGCGGTGAATGCCA.................................................................. 21 1 1 8.00 8 5 2 0 0 1 0
..........................................................................................................TAAGACACGCGGTGAATGCCAAG................................................................ 23 1 1 8.00 8 5 2 1 0 0 0
..........................................................................................................TAAGGTACGCGGTGAATGCCAAG................................................................ 23 1 1 8.00 8 2 5 1 0 0 0
.......................................................................TGGCATCCACTGTAGGCCTATATG.................................................................................................. 24 1 1 8.00 8 6 2 0 0 0 0
..........................................................................................................TAAGGCACGCTGTGAATGCC................................................................... 20 1 1 8.00 8 6 2 0 0 0 0
..........................................................................................................TAAGGCACGAGGAGAATGCCA.................................................................. 21 2 2 7.50 15 10 5 0 0 0 0
..........................................................................................................TAACGCACGCGGTAAATGCCT.................................................................. 21 3 2 7.50 15 15 0 0 0 0 0
............................................................................................................AGGCACGCGGTGAATGCCAAGA............................................................... 22 0 1 7.00 7 5 2 0 0 0 0
..........................................................................................................TAAGGCACGCGGGGAATGTCA.................................................................. 21 2 1 7.00 7 5 2 0 0 0 0

Anti-sense strand reads

ATAAGGGCACCAGGGCGGAACATACCCCCTAGGTAAAAAGAGTCACGAGCAGCAAACCATGCAAAAAGAGGACCATAGGTGACATCCGGATATACATAAAGCTGGTATTCCGTGCGCCACTTACGGTTCTCGCCTGCTTTGAGATGATAGTTTTTGTCGTTTGCTGCGGTTTTCACAAATTCTTTTACACTTA

***************************************************....(((((..(((.((((((.((((((..((((.((((.........))))))))..)))))).)))))).))).))))).....******************************************************** 		Read size # Mismatch Hit Count Total Norm Total V057

head
.....................................................................................CCGGATATACATAAGGATCGT....................................................................................... 21 3 1 1.00 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droPer2 scaffold_8:2078680-2078872 - dpe-mir-124 Known_mirbase TATTCCCGTGGTC--------CCGCCTTGTA------------------------------------------TGGGGGATCCAT---------------TT---T----------------TCTCAGTGC---TCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGGACGAAACTCTACTA-TCAAAAA-------------CAGCAAACGAC-----------------------------------GCCAAAAGTGT--TTAAGAA---------AATGTGAAT
dp5 4_group3:10867583-10867775 - dps-mir-124 Known_mirbase TATTCCCGTGGTC--------CCGCCTTGTA------------------------------------------TGGGGGATCCAT---------------TT---T----------------TCTCAGTGC---TCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGGACGAAACTCTACTA-TCAAAAA-------------CAGCAAACGAC-----------------------------------GCCAAAAGTGT--TTAAGAA---------AATGTGAAT
droWil2 scf2_1100000004577:940158-940365 - dwi-mir-124 Known_mirbase TCG-----CGATCGCCCTTGG---------ATAT-----------CAAATTCTTTATGAATTGACATACATTTTGGAG--TGCTT---------------TA---T----------------TCTCA-------GAGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGCAGGCCTATATGTTATTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAATTCTACAAAAACC-AAAACGCAAA-------------AATA---------------------------------TAAAAAT--------AAAGAA---------AACGGACAA
droVir3 scaffold_12963:16493156-16493302 + dvi-mir-124 Known_mirbase ------------------------------------------------------------------------------------------------------------------------------AGTGC----CGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGAATTTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAATTAACAAAAA-----------TAACAAACGACC--------------------------------TGACAAAAAGTGTCCTTAAG--------------------
droMoj3 scaffold_6500:21419485-21419606 + dmo-mir-124 Known_mirbase ---------------------------------------------------------------------------------------------------------------------------------------CGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGAATTTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAAATC-----------------CAACAAGCGACC-----------------------------------TCTAAA-------------------------------
droGri2 scaffold_15252:13906826-13906974 + dgr-mir-124 Known_mirbase ---------------------------------------------------------------------------------------------------------------------------------------CGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGTTTTTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACACTTCC----ATTCAAATATAACCAGCAAACGACT---------------------------------GCTTTAAAGTGT--G-----------------TGTGAAG
droAna3 scaffold_12916:3309682-3309858 - dan-mir-124 Known_mirbase TATTTCT------TCGAGTTCCTG-----------TCTTCCCAT-TAA----------------------------------------------GATGGTTA---TGCA--ATCG-CCTTGCCCAGAGGCTTTTGTGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAACTAC--------------------AAATGAC-------------------------------------------------------------------------
droBip1 scf7180000396737:1463446-1463670 + TATTTCT------TCGAGTTACCG-----------TCCTCCCATTCAA----------------------------------------------GATGGTTA---TGCA--ATCG-CCTCGCCCTGAGGCTTTTGTGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAATC--TCA------------------AACGACATATTAAAAATAAAAAATTTATTTGATTGGTGCTAAAAAAAAGTG--------------------------AT
droKik1 scf7180000302246:118920-119128 - TATTCCT------GCCCCTGG---------ATA--TTTCCTCAT-CA---------T----------------------------AATTCGGTTCATAATTA---CGCA--ATGA-GGACCCCTGAAGTGTA------TATTTTGTACTGTTTTCTCCTGGTGTCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAATTCTACTGTTTACTCAAAAA---TT----TAACTAAAAACC---------------------------------AGTTAAGAGTGT--TTA----------------------
droFic1 scf7180000453855:351009-351179 + TATTCTC------GCCCCTGG---------ATATATTTGCCCAG-C-----------------------TTT-------------TGTGA----CGACGTTA---TGCA--ATGA-GTAAAGCCCAAGTGTTCGCCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTAC-----------------------------------------------------------------------------------------------------------
droEle1 scf7180000491046:269562-269761 + TATTTCC------TGAGCTTC-AGC-------TT-----------CAA----------------------------------------------TGTCGTTA---TGCA--ATGA-GTAAAGCCCAAGTGTTCCTCTTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGCTCTACAAGTTACTCAAACA-AAA-----AACAAAGCGACA---------------------------------AACAAAAAGTGT--TTA----------------------
droRho1 scf7180000758059:247-448 + TATTTCC------TGAACTTC----------------------------------------------------------------AGCCA----CATCGTTA---TGCA--ATGA-GTAAAGCCCAAGTGTTCCTCTTGATTGGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCAAAGCAAAT--------------ACA---------------------------------AACAAAAAGTGC--TTAAAAAGGCC---------TACAA
droBia1 scf7180000302422:6140584-6140794 - TATTCCC------CCAGCTTC----------------------------------------------------------------AGCAG----CTTTGTTA---TGCA--ATGA-GTAAAGTCCAAGTGTCCTCCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCATACCCAGG-------------AACC---------------------------------AACAAAAAGTGT--TCAGAA-GCCTCATAAAATATAAAA
droTak1 scf7180000415617:20642-20832 - TATTTCC------TCAACTTC----------------------------------------------------------------AGTAA----CTTCGTTA---TGCA--ATGA-GTTCAGCCCAAGTGCCTTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATCTCTACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCATAATTATA-------------AACA---------------------------------AACAAAAAGTGT--TTAA---------------------
droEug1 scf7180000409016:190068-190224 + TATTTCC------TCAACTTG----------------------------------------------------------------AGATACTTCCGCTGTTA---TGCA--ATGA-GTAAACCCCAAGTGCCCTTTGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTAC-----------------------------------------------------------------------------------------------------------
dm3 chr2L:17566303-17566517 + dme-mir-124 Known_mirbase TATTATC------GCAACTTC----------------------------------------------------------------AGTGAGTTTCGTTGTTACATTGCATAACGACATAAAGCCCAAGTGTCCTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCATACCCAAT-------------AATA---------------------------------GACAGAAAGTGT--TTAAAA-GCCTGA---AA---TCAT
droSim2 2l:17125742-17125950 + dsi-mir-124 Known_mirbase TATTACC------GCAACTTC----------------------------------------------------------------AGTGAGCTTCGACGTTA---TGCA--ATGA-GTAAAGCCCAAGTGTCCTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCATACCCAAT-------------GATA---------------------------------CACCGAAAGTGT--TTAATA-GCCCGA---AA---TCAT
droSec2 scaffold_7:1207259-1207464 + dse-mir-124 Known_mirbase TATTACC------GCAACTTC----------------------------------------------------------------AGTGAGCTTCGTCGTTA---TGCA--ATGA-GTAAAGCCCAAGTGTCCTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCATACCCAAT-------------GATA---------------------------------GACAGAA-ATAA--TAGACAA---------ATTTCAAAT
droYak3 2R:3533184-3533340 - dya-mir-124 Known_mirbase TATTTCC------TAAACTTC----------------------------------------------------------------AGTGAGTTTCGTCGTTA---TGCA--ATGA-GTAAAGCCCAAGTGTTCTTCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTAC-----------------------------------------------------------------------------------------------------------
droEre2 scaffold_4845:6683927-6684128 - der-mir-124 Known_mirbase TATTTCC------GCAGCTTC----------------------------------------------------------------AGTGAGTTTCGTCGTTA---TGCA--ATGA-GTAAAGCCCAAGTGTCCTTCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCATACCCAAT-------------GATA---------------------------------GACCAAAAGTGT--TTGAAG-GCCC-------------T

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
TATTCCCGTGGTC--------CCGCCTTGTA------------------------------------------TGGGGGATCCAT---------------TT---T----------------TCTCAGTGC---TCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGGACGAAACTCTACTA-TCAAAAA-------------CAGCAAACGAC-----------------------------------GCCAAAAGTGT--TTAAGAA---------AATGTGAATSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA..............................................................................................................................21162853.006285384984992971831672458
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCC...............................................................................................................................20114609.00146091535852449033220
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG............................................................................................................................23110994.00109942534750945675365181
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA.............................................................................................................................2214506.00450615582592796134038
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT...........................................................................................................................241955.009550171233057521
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGC................................................................................................................................191889.00889022121259955
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT..............................................................................................................................211685.006850901605115
..............................................................................................................................................................TGGTATCCACTGTAGGCCTATATG..............................................................................................................................................................241482.004822514621522272
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC..............................................................................................................................211473.004730021932780
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA...........................................................................................................................241389.00389011413922312
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG..............................................................................................................................211251.00251011611880
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCA..............................................................................................................................201247.002470412831210
...............................................................................................................................................................GGTATCCACTGTAGGCCTATATG..............................................................................................................................................................231192.001921353331191
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG............................................................................................................................221116.00116035233460
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA............................................................................................................................231114.0011401355532
.................................................................................................................................................................................................TAAGGCACGCGGTGAATG.................................................................................................................................181103.0010303219790
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT.............................................................................................................................22197.009702141530
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC.............................................................................................................................22185.008500143410
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT............................................................................................................................23167.006701023430
..............................................................................................................................................................TGGTATCCACTGTAGGCCTA..................................................................................................................................................................20153.005302021300
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC............................................................................................................................23146.004600116290
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCA...............................................................................................................................20144.004400022220
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCC...............................................................................................................................19138.003804011230
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCT...............................................................................................................................20131.00310009220
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCACT............................................................................................................................23131.00310006250
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGC...........................................................................................................................24128.002801010170
..............................................................................................................................................................TGGTATCCACTGTAGGCCTATA................................................................................................................................................................22126.0026308960
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA.............................................................................................................................21126.00260401570
...................................................................................................................................................................................................AGGCACGCGGTGAATGCCA..............................................................................................................................19125.00250209140
...................................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGT...........................................................................................................................22122.002200010120
..............................................................................................................................................................TGGTATCCACTGTAGGCCT...................................................................................................................................................................19118.00180102150
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGTT..........................................................................................................................25116.0016000790
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT............................................................................................................................23116.00160005110
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCAC..............................................................................................................................21116.0016000790
...................................................................................................................................................................................................AGGCACGCGGTGAATGCCAAG............................................................................................................................21115.0015021660
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGT................................................................................................................................19114.00140002120
..............................................................................................................................................................TGGTATCCACTGTAGGCCTATAT...............................................................................................................................................................23114.00140011030
..............................................................................................................................................................TGGTATCCACTGTAGGCCTAT.................................................................................................................................................................21113.0013000760
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCTG..............................................................................................................................21113.00130001120
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGG...........................................................................................................................2419.009000180
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG.............................................................................................................................2219.009000180
...............................................................................................................................................................GGTATCCACTGTAGGCCTATA................................................................................................................................................................2118.008201140
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAATT...........................................................................................................................2418.008000521
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAGT...........................................................................................................................2318.008020150
..............................................................................................................................................................TGGTATCCACTGTAGGCC....................................................................................................................................................................1818.008000170
...................................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGA...........................................................................................................................2217.007000250
dp5
TATTCCCGTGGTC--------CCGCCTTGTA------------------------------------------TGGGGGATCCAT---------------TT---T----------------TCTCAGTGC---TCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGGACGAAACTCTACTA-TCAAAAA-------------CAGCAAACGAC-----------------------------------GCCAAAAGTGT--TTAAGAA---------AATGTGAATSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA..............................................................................................................................21149140.004914033959211850993038344324580033
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG............................................................................................................................23120538.002053803094457824654518555712610199
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCC...............................................................................................................................20113545.0013545169761663382075470215001
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA.............................................................................................................................2217820.0078200331117237822703599190051
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT...........................................................................................................................2411723.00172301103497267244021005
..............................................................................................................................................................TGGTATCCACTGTAGGCCTATATG..............................................................................................................................................................2411271.0012711127281423461202000334
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGC................................................................................................................................191933.009330132404614252340010
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT..............................................................................................................................211619.006192512193123545000
...............................................................................................................................................................GGTATCCACTGTAGGCCTATATG..............................................................................................................................................................231610.00610116198619414020179
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA...........................................................................................................................241593.0059305287252241714003
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCA..............................................................................................................................201502.00502034423751131000
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG............................................................................................................................221421.004210283162245512002
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC..............................................................................................................................211295.0029502145232240000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGC...........................................................................................................................241210.00210046211912130000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA............................................................................................................................231178.00178018582330432004
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCC...............................................................................................................................191120.001200632400150000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC............................................................................................................................231111.001110068236140000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG..............................................................................................................................211110.00110016915790000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC.............................................................................................................................22194.00940433155370000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT............................................................................................................................23187.00870423266280000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT.............................................................................................................................22178.00780111237350001
.................................................................................................................................................................................................TAAGGCACGCGGTGAATG.................................................................................................................................18169.0069013343382006
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA.............................................................................................................................21156.0056029345131001
..............................................................................................................................................................TGGTATCCACTGTAGGCCTATAT...............................................................................................................................................................23151.0051031118710020
..............................................................................................................................................................TGGTATCCACTGTAGGCCTATA................................................................................................................................................................22150.0050041012610008
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT............................................................................................................................23141.0041071160170000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCT...............................................................................................................................20138.0038021221120000
..............................................................................................................................................................TGGTATCCACTGTAGGCCTA..................................................................................................................................................................20135.003506011240003
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAGT...........................................................................................................................23134.0034012316120000
...................................................................................................................................................................................................AGGCACGCGGTGAATGCCA..............................................................................................................................19133.003302300280000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGTT..........................................................................................................................25132.0032042140120000
...................................................................................................................................................................................................AGGCACGCGGTGAATGCCAAG............................................................................................................................21128.002801401760000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG.............................................................................................................................22127.00270346680000
...................................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGT...........................................................................................................................22127.002704273101000
...............................................................................................................................................................GGTATCCACTGTAGGCCTATA................................................................................................................................................................21125.002500701500003
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCA...............................................................................................................................20121.002102010171000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAATT...........................................................................................................................24120.002001211060000
..................................................................................................................................................................................................AAGGCACGCGGTGAATGC................................................................................................................................18119.001901008010000
..............................................................................................................................................................TGGTATCCACTGTAGGCCTATATGA.............................................................................................................................................................25119.001902101100005
...............................................................................................................................................................GGTATCCACTGTAGGCCTATATGA.............................................................................................................................................................24119.00190210800008
..............................................................................................................................................................TGGTATCCACTGTAGGCCTAT.................................................................................................................................................................21116.00160511540000
...............................................................................................................................................................GGTATCCACTGTAGGCCTATAT...............................................................................................................................................................22116.00160141610003
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGT................................................................................................................................19115.00150703041000
..............................................................................................................................................................TGGTATCCACTGTAGGCCT...................................................................................................................................................................19113.00130301080001
...................................................................................................................................................................................................AGGCACGCGGTGAATGCCAA.............................................................................................................................20111.00110500240000
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAGA...........................................................................................................................23110.00100702010000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGG...........................................................................................................................24110.00100423010000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCACT............................................................................................................................2319.0090111060000
................................................................................................................................................................................................ATAAGGCACGCGGTGAATGCCAAG............................................................................................................................2419.0090900000000
...................................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGA...........................................................................................................................2219.0090411030000
...............................................................................................................................................................GGTATCCACTGTAGGCCTAT.................................................................................................................................................................2018.0080410110001
...................................................................................................................................................................................................AGGCACGCGGTGAATGCC...............................................................................................................................1817.0070303010000
..............................................................................................................................................................TGGTATCCACTGTAGGCCTT..................................................................................................................................................................2017.0070400030000
droWil2
TCG-----CGATCGCCCTTGG---------ATAT-----------CAAATTCTTTATGAATTGACATACATTTTGGAG--TGCTT---------------TA---T----------------TCTCA-------GAGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGCAGGCCTATATGTTATTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAATTCTACAAAAACC-AAAACGCAAA-------------AATA---------------------------------TAAAAAT--------AAAGAA---------AACGGACAASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA..............................................................................................................................21176943.007694349918907293438639439
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA.............................................................................................................................22124092.00240928728063218781784
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGC................................................................................................................................19123262.002326229668534722735
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCC...............................................................................................................................20120630.0020630549245360221717259
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG............................................................................................................................2315236.005236651423334711525
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA............................................................................................................................231491.00491341377106
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCA..............................................................................................................................201309.00309117414786
.................................................................................................................................................................................................TAAGGCACGCGGTGAATG.................................................................................................................................181291.0029146413264
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCA...............................................................................................................................201263.002630016256
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT..............................................................................................................................211244.00244254712196
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT............................................................................................................................231193.0019312113950
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG..............................................................................................................................211158.00158132126116
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT...........................................................................................................................241123.001234503579
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGA................................................................................................................................191110.001100002108
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC..............................................................................................................................21198.00983002867
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA...........................................................................................................................24181.00811613241
...............................................................................................................................................................GGTATCCACTGCAGGCCTATATG..............................................................................................................................................................23176.007638120206
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA.............................................................................................................................21156.00560200306
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCC...............................................................................................................................19152.00520210229
..................................................................................................................................................................................................AAGGCACGCGGTGAATGC................................................................................................................................18147.0047050339
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG............................................................................................................................22142.004211301711
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGT................................................................................................................................19137.0037011035
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC.............................................................................................................................22136.00360102411
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT.............................................................................................................................22136.0036410823
...................................................................................................................................................................................................AGGCACGCGGTGAATGCCA..............................................................................................................................19136.00360911511
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCT...............................................................................................................................20125.0025003517
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC............................................................................................................................23121.0021000138
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG.............................................................................................................................22119.0019210115
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCG...............................................................................................................................20113.0013000013
.................................................................................................................................................................................................TAAGGCACGCGGTGAATCA................................................................................................................................1927.5015000114
..............................................................................................................................................................TGGTATCCACTGCAGGCCTATATG..............................................................................................................................................................2417.00711050
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGG................................................................................................................................1916.00610005
...................................................................................................................................................................................................AGGCACGCGGTGAATGCCAAG............................................................................................................................2115.00500050
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAATT...........................................................................................................................2415.00500041
droVir3
------------------------------------------------------------------------------------------------------------------------------AGTGC----CGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGAATTTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAATTAACAAAAA-----------TAACAAACGACC--------------------------------TGACAAAAAGTGTCCTTAAG--------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA..............................................................................................................................211126422.001264229813934141511807030000172509625480897771020349926159781836411022191561105022811501000010111743512111108028224428012111016000020012
...............................................................................................................................................................GGTATCCACTGTAGGCCTCTATG..............................................................................................................................................................23160381.0060381156123753020000000000104451100700000000000020000273641746228942483321761433960744958023827523243342852211401135615434000131331263511000701982106785
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCC...............................................................................................................................20119738.00197385102620533000401100012199154539751341657119511694000000200000002000000000000000110291298886524600001109005000165
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA.............................................................................................................................2219515.009515174155521200000000121293038569848938518211133000013203106262313000100030025125710110122135419313500100001000020001
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC..............................................................................................................................2113666.003666071400000000003832421252644132860148811900000000000000000000000000000000000114319000000000000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGC................................................................................................................................1912407.002407081122800010000008579426997390103117000000000000000000000000000000000011315654500000000002001405
..............................................................................................................................................................TGGTATCCACTGTAGGCCTCTATG..............................................................................................................................................................2412306.0023060100190000000000100100012000000000000000001244310382119244182264218154213138171311450911000028000000210674
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG............................................................................................................................2311958.00195855106151000000000022513177166938401852760000000000000110000000100331412612710121832751000000100000000002
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT..............................................................................................................................211977.009770152770001000000397231425215098800000000000000000000000000000000000010491600000000000000000
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCA..............................................................................................................................201544.005440036780000000000201341413403030000000000000000000000000000000000000041000000000000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA............................................................................................................................231531.005310014290000000000675030662535048770010001000001110000000000000201300031362100000000000000000
...............................................................................................................................................................GGTATCCACTGTAGGCCTCTA................................................................................................................................................................211260.00260214114000000000000011000000000000000000100000001779341137191219130103810000001400000011100
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG..............................................................................................................................211211.00211067200000000009251443015200000000000000000000000000000000000003112000000000000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT............................................................................................................................231206.00206006250000000000411732210502327000000000000000000000000000001000000518200000000010000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT.............................................................................................................................221198.00198001620000000000281471217902931000000000000000000000000000000000000032100000000000000000
...............................................................................................................................................................GGTATCCACTGTAGGCCTCTAT...............................................................................................................................................................221168.001681102400000000000101000020000000001001000000010931196201984100003142100010001000001121
.................................................................................................................................................................................................TAAGGCACGCGGTGAATG.................................................................................................................................181144.001440011100000000008109117701212000000000000000000000000000000000001152000000000000001100
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC.............................................................................................................................221126.00126003130000000000196311990166000000000000000000000000000000000000525100000000000000000
...............................................................................................................................................................GGTATCCACTGTAGGCCTCTATA..............................................................................................................................................................231111.0011100010000000000000000000000000000000000000000110691671569570001710000000100000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA...........................................................................................................................24184.00840054000000000098293100416000000000000000000000000000010000000013000000000000000000
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCC...............................................................................................................................19183.0083015210000000000021241042000000000000000000000000000000000000112000000000000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT...........................................................................................................................24173.00730041200000000001051714038000000000000001000000000000000000000116000000000000000000
...............................................................................................................................................................GGTATCCACTGTAGGCCTCT.................................................................................................................................................................20164.006401406000000000000011000100000000000000000001000013025324000522000003201000013001
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA.............................................................................................................................21162.006200406000000000040001303100000000000000000000000000000000000013000000000000000000
...............................................................................................................................................................GGTATCCACTGTAGGCCTCTATT..............................................................................................................................................................23160.006009000000000000000010000000000000000000000000001041403440009190000000100000000000
...............................................................................................................................................................GGTATCCACTGTAGGCCTCTATGA.............................................................................................................................................................24155.005500020000000000000000000000000000000000000000024094108522100500000000000000000100
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT............................................................................................................................23150.005000300000000000850542011700000000000000000000000000000000000004100000000000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCA...............................................................................................................................20149.004900000000000000520300023000000000000000000000000000000000000033000000000000000001
...................................................................................................................................................................................................AGGCACGCGGTGAATGCCA..............................................................................................................................19145.0045002100000000000400111033000000000000000000000000000000000000011000000000000000000
...............................................................................................................................................................GGTATCCACTGTAGGCCT...................................................................................................................................................................18138.003801900000000000000000000000000000000000000000000023305120000300000000000000000000
.......................................................................................................................................................................CTGTAGGCCTCTATG..............................................................................................................................................................15136.00360000000000000000000000000000000000000000000002123253044010900000000000000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG.............................................................................................................................22136.00360083000000000012121203600000000000000000000000000000001000015000000000000000000
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG............................................................................................................................22136.003600108000000000033021003300000000000000000000000000000010000110000000000000000000
...............................................................................................................................................................GGTATCCACTGTAGGCCTCTATGT.............................................................................................................................................................24134.00340301000000000000000000000000000000000000000002103226022000900000000000000000100
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC............................................................................................................................23131.00310019000000000030032201200000000000010000000000000000000000114000000100000000000
...............................................................................................................................................................GGTATCCACTGTAGGCCTCTATC..............................................................................................................................................................23129.00290101000000000000000000000000000000000000000000052282221000300000000000000000000
...............................................................................................................................................................GGTATCCACTGTAGGCCTCTATAT.............................................................................................................................................................24122.00220000000000000000000000000000000000000000000002030432103000400000000000000000000
................................................................................................................................................................................................ATAAGGCACGCGGTGAATGCCA..............................................................................................................................22121.002100180000000000000010100100000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TCCACTGTAGGCCTCTATG..............................................................................................................................................................19120.002001700000000000000000000000000000000000000000000000001010000100000000000000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAATT...........................................................................................................................24118.00180002000000000051013002200000000000000000000000000000000000101000000000000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCT...............................................................................................................................20117.001700010000000000100010011000000000000000000000000000000000000012000000000000000000
..................................................................................................................................................................................................AAGGCACGCGGTGAATGC................................................................................................................................18114.00140080000000000002000000000000000000000000000000000000000000004000000000000000000
....................................................................................................................................................................CCACTGTAGGCCTCTATG..............................................................................................................................................................18113.001301000000000000000000000000000000000000000000000100010000000100000000000000000000
..............................................................................................................................................................TGGTATCCACTGTAGGCCTCTA................................................................................................................................................................22112.00120000000000000000000000000000000000000000000000112021030000100000000100000000000
.................................................................................................................................................................TATCCACTGTAGGCCTCTATG..............................................................................................................................................................21111.00110400000000000000000000000000000000000000000000000110000201200000000000000000000
..............................................................................................................................................................TGGTATCCACTGTAGGCCTCTAT...............................................................................................................................................................23111.00110000000000000000100100100000000000010000000001100101001000110000000000000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGT................................................................................................................................19111.00110010000000000000000000000000000000000000000000000000000000019000000000000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCAC..............................................................................................................................21110.00100000000000000010000001000000000000000000000000000000000000017000000000000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAAT..................................................................................................................................1719.0090000000000000000000000000000000000000000000000000000000000104000000100000010020
..............................................................................................................................................................TGGTATCCACTGTAGGCCTCT.................................................................................................................................................................2119.0090200000000000000102000100000000000100000000000000001000000001000000000000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATTT...........................................................................................................................2419.0090000000000000001220001200000000000000000000000000000000000001000000000000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGA................................................................................................................................1919.0090010000000000001000000100000000000000000000000000000000000006000000000000000000
droMoj3
---------------------------------------------------------------------------------------------------------------------------------------CGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGAATTTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAAATC-----------------CAACAAGCGACC-----------------------------------TCTAAA-------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA..............................................................................................................................211148445.0014844556403768316744978456696883
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA.............................................................................................................................22149537.00495376843483181329034057975
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCC...............................................................................................................................20133691.003369164426210559150926791343
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG............................................................................................................................2319441.009441309488600926708830
...............................................................................................................................................................GGTATCCACTGTAGGCCTCTATG..............................................................................................................................................................2315658.0056589704232748878
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGC................................................................................................................................1914792.004792128916912282549133
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT..............................................................................................................................2112286.00228654684713284011
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA............................................................................................................................2311720.0017201480508714872
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT............................................................................................................................2311224.0012241614396610890
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC..............................................................................................................................211996.00996045663270180
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC.............................................................................................................................221977.0097731633259000
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCA..............................................................................................................................201961.00961518537703292
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC............................................................................................................................231402.0040219163850
..............................................................................................................................................................TGGTATCCACTGTAGGCCTCTATG..............................................................................................................................................................241367.00367261652921
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT...........................................................................................................................241362.003627730612534
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA.............................................................................................................................211355.00355685362730
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG..............................................................................................................................211347.0034721194165741
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT.............................................................................................................................221289.0028940445901091
.................................................................................................................................................................................................TAAGGCACGCGGTGAATG.................................................................................................................................181238.0023810683125113
...............................................................................................................................................................GGTATCCACTGTAGGCCTCTAT...............................................................................................................................................................221188.00188019011680
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA...........................................................................................................................241147.001471341448671
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG............................................................................................................................221128.0012832444840
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCC...............................................................................................................................191109.00109550219330
...............................................................................................................................................................GGTATCCACTGTAGGCCTCTA................................................................................................................................................................211108.0010803001050
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCT...............................................................................................................................20196.0096003643170
...............................................................................................................................................................GGTATCCACTGTAGGCCTCT.................................................................................................................................................................20194.00940500890
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCA...............................................................................................................................20170.007012204223
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT............................................................................................................................23164.006470113790
...................................................................................................................................................................................................AGGCACGCGGTGAATGCCA..............................................................................................................................19163.00631901117151
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAATT...........................................................................................................................24161.00611047490
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG.............................................................................................................................22151.005186611200
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGC...........................................................................................................................24142.00420111390
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGT................................................................................................................................19141.004100112703
...............................................................................................................................................................GGTATCCACTGTAGGCCTCTATGA.............................................................................................................................................................24137.00370000370
...............................................................................................................................................................GGTATCCACTGTAGGCCTCTAC...............................................................................................................................................................22126.00260000260
...............................................................................................................................................................GGTATCCACTGTAGGCCTCC.................................................................................................................................................................20123.00230000230
...................................................................................................................................................................................................AGGCACGCGGTGAATGCCAA.............................................................................................................................20123.00232101190
..............................................................................................................................................................TGGTATCCACTGTAGGCCTCTAT...............................................................................................................................................................23122.002201001110
..................................................................................................................................................................................................AAGGCACGCGGTGAATGC................................................................................................................................18121.00211501230
...............................................................................................................................................................GGTATCCACTGTAGGCCTCTATT..............................................................................................................................................................23121.00210611130
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAAT...........................................................................................................................24120.00200000200
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCACT............................................................................................................................23119.00190041140
................................................................................................................................................................................................ATAAGGCACGCGGTGAATGCCA..............................................................................................................................22118.00181201320
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCTT..............................................................................................................................21117.00170071000
...............................................................................................................................................................GGTATCCACTGTAGGCCTCTATGT.............................................................................................................................................................24117.00170300131
droGri2
---------------------------------------------------------------------------------------------------------------------------------------CGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGTTTTTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACACTTCC----ATTCAAATATAACCAGCAAACGACT---------------------------------GCTTTAAAGTGT--G-----------------TGTGAAGSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA..............................................................................................................................211652.0065258765
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG............................................................................................................................231164.0016415014
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA.............................................................................................................................22189.0089809
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCA..............................................................................................................................20167.0067670
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCC...............................................................................................................................20149.0049454
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA...........................................................................................................................24110.001082
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG............................................................................................................................2218.00880
...................................................................................................................................................................................................AGGCACGCGGTGAATGCCA..............................................................................................................................1916.00660
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA.............................................................................................................................2115.00550
................................................................................................................................................................................................ATAAGGCACGCGGTGAATGCCA..............................................................................................................................2215.00550
..............................................................................................................................................................TGGTATCCACTGTAGGCCTCTATG..............................................................................................................................................................2415.00523
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCC...............................................................................................................................1915.00550
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGC................................................................................................................................1913.00321
...............................................................................................................................................................GGTATCCACTGTAGGCCTCTATG..............................................................................................................................................................2313.00321
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT............................................................................................................................2313.00330
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT...........................................................................................................................2413.00330
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA............................................................................................................................2312.00220
..............................................................................................................................................................TGGTATCCACTGTAGGCCTCTAT...............................................................................................................................................................2312.00211
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAGA...........................................................................................................................2312.00220
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC.............................................................................................................................2212.00220
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAAT...........................................................................................................................2411.00110
................................................................................................................................................................................................ATAAGGCACGCGGTGAATGCCAAT............................................................................................................................2411.00110
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC............................................................................................................................2311.00101
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG.............................................................................................................................2211.00110
................................................................................................................................................................................................ATAAGGCACGCGGTGAATGCCAAG............................................................................................................................2411.00110
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT..............................................................................................................................2111.00110
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAGCT..........................................................................................................................2411.00110
..................................................................................................................................................................................................AAGGCACGCGGTGAATGC................................................................................................................................1811.00110
.............................................................................................................................................................CTGGTATCCACTGTAGGCCTCT.................................................................................................................................................................2211.00110
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGG...........................................................................................................................2411.00110
droAna3
TATTTCT------TCGAGTTCCTG-----------TCTTCCCAT-TAA----------------------------------------------GATGGTTA---TGCA--ATCG-CCTTGCCCAGAGGCTTTTGTGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAACTAC--------------------AAATGAC-------------------------------------------------------------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA..............................................................................................................................21186069.00860691689183029734073128346897
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCC...............................................................................................................................20150146.00501463541236471421188333415
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGC................................................................................................................................19137468.0037468156742323925033747
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA.............................................................................................................................2214890.0048901396499322241351650
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG............................................................................................................................2313791.003791218350341151661972
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT..............................................................................................................................2112160.0021602551961371131
.................................................................................................................................................................................................TAAGGCACGCGGTGAATG.................................................................................................................................181511.005118111725324
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG..............................................................................................................................211445.0044553120711218
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC..............................................................................................................................211442.00442014343490
...............................................................................................................................................................GGTATCCACTGTAGGCCTATATG..............................................................................................................................................................231342.003427951752216
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCA...............................................................................................................................201323.00323010646252
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCA..............................................................................................................................201288.0028813010067180
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA............................................................................................................................231211.002114382622103
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT...........................................................................................................................241209.002093253514123
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA...........................................................................................................................241193.001931290533116
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGA................................................................................................................................191192.00192000180174
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCT...............................................................................................................................201167.0016715077975
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGT................................................................................................................................191158.001585002310120
..............................................................................................................................................................TGGTATCCACTGTAGGCCTATATG..............................................................................................................................................................241117.001171117426455
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCC...............................................................................................................................19199.0099219021246
..................................................................................................................................................................................................AAGGCACGCGGTGAATGC................................................................................................................................18180.008011001068
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT............................................................................................................................23176.0076110119144
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT.............................................................................................................................22173.007350137129
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC.............................................................................................................................22162.006219239011
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG............................................................................................................................22151.0051272012010
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC............................................................................................................................23141.004102011406
.............................................................................................................................................................CTGGTATCCACTGTAGGCCTATA................................................................................................................................................................23132.00321000130
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA.............................................................................................................................21129.00297301009
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG.............................................................................................................................22129.00295002202
...................................................................................................................................................................................................AGGCACGCGGTGAATGCCA..............................................................................................................................19127.00276008013
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCG...............................................................................................................................20127.00270008118
...............................................................................................................................................................GGTATCCACTGTAGGCCTATA................................................................................................................................................................21121.00211530012
.................................................................................................................................................................................................TAAGGCACGCGGTGAATT.................................................................................................................................18119.0019200908
...................................................................................................................................................................................................AGGCACGCGGTGAATGCC...............................................................................................................................18118.00181007010
..............................................................................................................................................................TGGTATCCACTGTAGGCCTATA................................................................................................................................................................22118.00180103014
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT............................................................................................................................23117.00170001106
...............................................................................................................................................................GGTATCCACTGTAGGCCTATAT...............................................................................................................................................................22116.0016082105
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGG................................................................................................................................19114.00140003110
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCTT.............................................................................................................................22112.0012000606
.................................................................................................................................................................................................TAAGGCACGCGGTGAATC.................................................................................................................................18112.00120001011
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCTG..............................................................................................................................21112.00120001101
droBip1
TATTTCT------TCGAGTTACCG-----------TCCTCCCATTCAA----------------------------------------------GATGGTTA---TGCA--ATCG-CCTCGCCCTGAGGCTTTTGTGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAATC--TCA------------------AACGACATATTAAAAATAAAAAATTTATTTGATTGGTGCTAAAAAAAAGTG--------------------------ATSizeHit CountTotal NormTotal
No Reads
droKik1
TATTCCT------GCCCCTGG---------ATA--TTTCCTCAT-CA---------T----------------------------AATTCGGTTCATAATTA---CGCA--ATGA-GGACCCCTGAAGTGTA------TATTTTGTACTGTTTTCTCCTGGTGTCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAATTCTACTGTTTACTCAAAAA---TT----TAACTAAAAACC---------------------------------AGTTAAGAGTGT--TTA----------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TATTCTC------GCCCCTGG---------ATATATTTGCCCAG-C-----------------------TTT-------------TGTGA----CGACGTTA---TGCA--ATGA-GTAAAGCCCAAGTGTTCGCCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTAC-----------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TATTTCC------TGAGCTTC-AGC-------TT-----------CAA----------------------------------------------TGTCGTTA---TGCA--ATGA-GTAAAGCCCAAGTGTTCCTCTTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGCTCTACAAGTTACTCAAACA-AAA-----AACAAAGCGACA---------------------------------AACAAAAAGTGT--TTA----------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TATTTCC------TGAACTTC----------------------------------------------------------------AGCCA----CATCGTTA---TGCA--ATGA-GTAAAGCCCAAGTGTTCCTCTTGATTGGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCAAAGCAAAT--------------ACA---------------------------------AACAAAAAGTGC--TTAAAAAGGCC---------TACAASizeHit CountTotal NormTotal
No Reads
droBia1
TATTCCC------CCAGCTTC----------------------------------------------------------------AGCAG----CTTTGTTA---TGCA--ATGA-GTAAAGTCCAAGTGTCCTCCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCATACCCAGG-------------AACC---------------------------------AACAAAAAGTGT--TCAGAA-GCCTCATAAAATATAAAASizeHit CountTotal NormTotal
No Reads
droTak1
TATTTCC------TCAACTTC----------------------------------------------------------------AGTAA----CTTCGTTA---TGCA--ATGA-GTTCAGCCCAAGTGCCTTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATCTCTACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCATAATTATA-------------AACA---------------------------------AACAAAAAGTGT--TTAA---------------------SizeHit CountTotal NormTotal
No Reads
droEug1
TATTTCC------TCAACTTG----------------------------------------------------------------AGATACTTCCGCTGTTA---TGCA--ATGA-GTAAACCCCAAGTGCCCTTTGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTAC-----------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
TATTATC------GCAACTTC----------------------------------------------------------------AGTGAGTTTCGTTGTTACATTGCATAACGACATAAAGCCCAAGTGTCCTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCATACCCAAT-------------AATA---------------------------------GACAGAAAGTGT--TTAAAA-GCCTGA---AA---TCATSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA..............................................................................................................................211710203.007102030000399013672026213601581071159015093306885390018121039420136225118349578263113111000220360203012000311717205030000000000000000010211047738317236177986523241115920644915492709141996714321627493140317476832115291376088188318105516547656460810154348366496427591341209317352440513832775151996626847663336561610000000000189161592910020001604520000008012814121841693501038559244388111552591296016846902345355441921700133031041443020560432000007001420324201744392300030000200006300670487344136211185185513358251039682297020135316103032321701210015940311441304106121767340122612635068816130412444109313542146183673323713541213693230020211121115430597306100531039271271218
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA.............................................................................................................................221237584.0023758400009583832220160517601501046134095317614401002202006205224401060100000100000020010003321736200000000000000000021223734154774255573881615723796944657184480429119608180460177013831347461891564130118641943452182199154116481620890342325771639282540130165312773116420100000000001392619287701001200400000000170006801129080150265520215716284130632000008279141000505000000110000000116133811000302000056002881282815421520012344861128020004540000000010010001101007050000054710177989321114419712456402801157096165000021011000002175612322941723104200
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCC...............................................................................................................................201191799.0019179900001154025352152080922111080000404424467330561877108780000001000800100000001931124900000000000000000000043915131232441001120614144188121576358171591177456719711867301313110615031111522102721514608446115248979461512110000000000262280000010000101000000004617312887011821961552219879334656179281365159212104730210140300130141000000000000017050151156011000010000220041750207741189818912192765150106888011001700001100027000000261014110100251495614861181802797869954494169960120421251112916430200503000000020304295785431844422713341117114
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGC................................................................................................................................19151356.005135600000000000000684010200000020219204242543770000000000000000000002816700000000000000000000066255181106010421312034142112277641005035218621027217089127012340431721371980000000000505400000011000000000000201813480103921313112146724175580270000035960700004020000000000000150000116000001000000000019402892353291093304976149500000386000000011000000000000000000139742562521167323543517222000218401061310000000000000000172180921614276102840113110
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG............................................................................................................................23131933.003193300009140812213912947045202517000000100101856745101000000000000000000000054332200000000000000000000094121511697179242039491822181653879835169859325237124711621243131610583660558398117810011046415014119116135000000000037738123101000000000000000000405696038220102452619629113861406610010025833020000200000000000000000001117020513230000000050157914835450001434691104020001810000000010100000511010300002820158312481359437185013052330100940478000000000012000111087919301091523001500
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC..............................................................................................................................21111343.00113430000500011001000000000000000000000000000000000000000000000000000000000000000000028202611300004151994188212511554212013212000021072201163228529410288075123129276535874300000000004020000000000000000000002126921101570051001303041000001600000000000000000000000000000000000000000000100694804261311002140170024000001600000000000000000000000000002855413117541040000003801109132000000000000000024000100000000
...............................................................................................................................................................GGTATCCACTGTAGGCCTATATG..............................................................................................................................................................23110344.0010344000012123084304680100000000000026214246503510000000000000000000002010000000000000000000001350710522611204280110131592710581455410125913421200032121422791040713201209049260371131410000000000210227610000000300000000000005055080622756050502214918316378000002900000000000000000000000000001000001000000000000158144010111000173307000004000100000000000000000000001164102871451475603211312110012018180000000200000000213921511000100
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA............................................................................................................................2319113.00911300005400435508453030011110000300000000001000000000000000000000000000000000000000000000966020686640520814110247113124742187514814618423329522231812939131419405006700901203027228380000000000817040000000000000000000001181990870014110521040900735000004010020000101000000000000000101000000000100000010056570215000018410140000012100000000000000000000010000075102708319112149000000120711000000000000000002800202000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATG.................................................................................................................................1817444.00744400000000000000100130000402001935929430000000000000000000000100000000000000000000000159025447000416115161654122697114215739001041124217250712416010251094710000000000000100000000000000010000000213608502036459222847620000043103000010100000000000008000000300000000000000005160480300111225180000013000000000000000000000000000020911425733789321100000380313100000001000000004624431795317001000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT..............................................................................................................................2114729.00472900004700001229301400410000000000000000000000000000000000000000000000000000000000000128002422000232519811916381914173195690050201630025098419017210907928800000000000010000000000000000000000016218201000025654421530246000006010100000000000000000000000000000000000000005100121101510930027946002500000280000000010000000000000000000132871532452102201000090670000000000000000241231112000000
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCA..............................................................................................................................2013007.00300700003000020210000010000000000000000000000000000000000000737013000000000000000000000700111600020717125102210111014223000200111263031112121350269260330826000000000000000000000000000000000000381340019000562146185097013180000020110000000000000000000000000000000000000000000000580115100071302000006000000000000000000000000000028334052321330000002022000000000000000001510111000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG..............................................................................................................................2112959.002959000035200210231070013000010000000000000000000000000000000000000000000000000000000020710162300032152261392565266527455881301105157720260140501102401114040122180000000000000000000000000000000000001401180800093602322001910000046000000000000000000000000000100100000000000000001621036730003170070001028000000000000000000001000000031595454030531100007045000000000000000005601100000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT............................................................................................................................2312270.00227000001010082201100100310000200000000000000000000000000000000000000000000000000000000195714514400060226148111982014202855707270202018065690160110000101016187000000000021200000000000000000000000293902700242902901008000000580000000000000000000000000000000000000000000140015190121000790100000300000000000000000000000000001144221941621000000500400000000000000001601000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA...........................................................................................................................2412147.002147000082000412200001000000000001423201000000000000000000000052000000000000000000010094051200013318521141520231016243200400333527010354040614011114120000000000000000000000000000000000004486051001234014704317510000002652030000204000000000000000000000010000000000000028021620001330090000011000000000000000000000000000087140788722213500000010024000000000000000022520300000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT.............................................................................................................................2212123.0021230000132121624212303005100000000000000000000000000000000000000000000000000000000000003212015995000451161135401316173414368352207011422490190201010711023141400000000000000000000000000000000000027360211051302309043000006000000000000000000000000000000000000000000064002601500004300100000200000000000000000000000000002516153004110000005002000000000000000012010010000000
..............................................................................................................................................................TGGTATCCACTGTAGGCCTATATG..............................................................................................................................................................2411517.0015170000400143000040000000000000000000000000000000000000000000000000000000000000000021126566000015204230012392000300005215030750204050415200000000004141360000000000000000000001526019002182170263491000000600000000000000000000000000000000000000000000000443202400005160100000900000000000000000000000000013686761032432304100000030610000000010000000017920915000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC.............................................................................................................................2211470.00147000003200120200200110000000000000000000000000000000000000000000000000000000000000388333389000119323831310552516192100300201615801014560104110382392100000000001020000000000000000000000018150130045040101000000100000000000000000000000000000000000000000000100013902160000340200000400000000000000000000000000004371761611000000700300000000000000000300000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCA...............................................................................................................................2011421.001421000014200010200200110000001000000006000000000000000000000000000000000000000000000200100000001107151003430001001031101226101020140100390000000000000000000000000000000000001216040183132301311220000021000000000000000000000000000000100000000000000004101280001511805000006000000000000000000000000000050286382051011000040480000000000000000566622011000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGT................................................................................................................................1911384.0013840000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000100000000020000000000000040000000000510000000000000000000000000000000000000500001519090030000030000000101000000000000040000000000000000000000000031000001850100000200000000000000000000000000002410122400000200001002000000000000000012113321011000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT...........................................................................................................................2411280.00128000006000110200000300000000000000000000000000000000000000000000000000000000000000921233600011714124106212151112166000401002519130001220301110915700000000000010000000000000000000000020330220057171291280310000001320000000000000000000000000000000000000000000000012150124000033505000003000000000000000010000000000030373030530430000004036000000000000001017120010000000
................................................................................................................................................................................................ATAAGGCACGCGGTGAATGCCA..............................................................................................................................2211056.00105600001600019160051004000000000000000000000000000000000000000000000000000000000000030006391003114403381835152317454905004011025591100000000006034000000000000000000000000000000000000000200000300000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021110200000000000000000000000000000000000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG.............................................................................................................................221738.007380000160007162810100000000000000000000000000000000000000000000000000000000000000000211415265000207393172935641128166200001115440150603100020005014000000000000000000000000000000000000620300250402030000005000000000000000000000000000000000000000000000004400300001400000002000000000000000000000000000033291200000000200000000000000000000600000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCT...............................................................................................................................201724.0072400005000000100000000000100000000000000000000000000000000000000000000000000000000700000001008000010000461000000000001112000050201601110000000000000000000000000000000000000613080011501408010000000910000000000000000000000000000000000000000000000010317300056402000003000000000000000000000000000023263635023001000020240000000000000000427001111000000
...................................................................................................................................................................................................AGGCACGCGGTGAATGCCA..............................................................................................................................191682.00682000000000000000000000000000000000000000000000000000000003000000000000000000000001300513100311315014116171782122400000001621000300302100100000000000000000000000000000000000000018150200076090506000000280000000000000000000000000000000000000000000000053010000007050000020000000000000000000000000000111091301110000000001100000000000000000200000000000
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCC...............................................................................................................................191628.006280000000000000031000000000001000000000000000000000000000042100000000000000000000040000000000001102000190000000002002016002011050402300000000000000000000000000000000000060580260115472480410420000005600000000000000000000000000000000000000000000000000170000350400000400000000000000000000000000001620283702100000002010000000000000000002400000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGA................................................................................................................................191616.0061600000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000110002000402200000000000000000000000000000000000026020007010501000000300000000000000000000000000000000000000000000000000012000003701000002000000000000000000000000000037275017000000000040320000000000000000537140100000000
................................................................................................................................................................................................ATAAGGCACGCGGTGAATGCCAA.............................................................................................................................231606.006060000200175140000005000000000000000000000000000000000000000000000000000000000000092506315000040109132161113161815500000000243370100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATC............................................................................................................................231551.005510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100010110000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335208000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000
...............................................................................................................................................................GGTATCCACTGTAGGCCTATAT...............................................................................................................................................................221535.00535000010005100000000000000000100000000000000000000000000000000000000000000000000002397139774001063034000021714000101006187010000000000001200000000001107100000000000000000000027044146320645300000300000000000000000000000000000000000000000000000860020000110000000000000000000000000000000000004511611200000000001100000000000000000400000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAATC...........................................................................................................................241467.004670000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000100001000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000278180000000000000100000000000000000000000000000000000000010100000000000000000000000000000000000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC............................................................................................................................231466.004660000100032041000000000000000000000100000000000000000000000000000000000000000000061125570000082302022120346440000000115241406012000000004027000000000000200000000000000000000000460500551203020000001800000000000000000000000000000000002000000004200480000000140100000000000000000000000000000000006117932300010000100100000000000000000500000000000
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA.............................................................................................................................211461.0046100002000001200000000000000000000000000000000000000000000114200000000000000000000077044430015165028230310319640002000074301010010022201011000000000000000000000000000000000000232201300114011050900000016000000000000000000000000000000000000000000000006300000003000000002000000000000000000000000000011220800000000000000000000000000000000000000000
...................................................................................................................................................................................................AGGCACGCGGTGAATGCCAA.............................................................................................................................201283.002830000100000000000000000000000000000000000000000000000000001000000000000000000000016628760003053010222131911540000000061540000000000000000000000000000000000000000000000000000040100020100000000003000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000
...............................................................................................................................................................GGTATCCACTGTAGGCCTATATGA.............................................................................................................................................................241270.00270000000004010000000000000000000000000000000000000000000000000000000000000000000000120996510000010212001002000000001160050000000000000000000000000000000000000000000000000020000001100100000000000000000000000000000000000000000000000000000000230000000000000000000000000000000000000000000000000361100000000000000000000000000000000000000000
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG............................................................................................................................221258.0025800000000000000000000000000000000000000000000000000000000110000000000000000000000110460001002033010011390000000031000030000000000100000000000000000000000000000000000001510012001591110110100000003600000000000000000000000000000000000000000000000200010000110100000200000000000000000000000000002135831220000000000000000000000000000110000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCG...............................................................................................................................201257.0025700000000000000000000000000000000000000000000000000000000000000000000000000000000200110000006001000002500000000000000120110301060620000000000000000000000000000000000004502001120723312620000010000000000000000000000000000000000000000000000000201600000500000002000000000000000000000000000061210300100000001011000000000000000024900000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCATC.............................................................................................................................221254.002540000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141113000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................GGTATCCACTGTAGGCCTATA................................................................................................................................................................211254.002540000000100000000000000000004040301000000000000000000000002000000000000000000000021015517000001001700002400000000004200110000015010220000000000202000000000000000000000006302134035007101000000000000000000000000000000000000000000000000000000850010000130100000000000000000000000000000000104526326000000000001000000000000000002101000000000
...............................................................................................................................................................GGTATCCACTGTAGGCCTAT.................................................................................................................................................................201191.0019100000000110000000000000000020000005000000000000000000000000000000000000000000000070342700001100250000031010010000213100000000000000040000000000000000000000000000000000000170222022104645000000000000000000000000000000000000000000000000000002500000001300000000000000000000000000000000000000203300000000000000000000000000000400000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCCC.............................................................................................................................221183.001830000000000000000000000000000000000000000000000000000000000000000000000000000000080003600000060824000010100000000002001610000000012293000000000000000000000000000000000000320100000000000000001000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
droSim2
TATTACC------GCAACTTC----------------------------------------------------------------AGTGAGCTTCGACGTTA---TGCA--ATGA-GTAAAGCCCAAGTGTCCTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCATACCCAAT-------------GATA---------------------------------CACCGAAAGTGT--TTAATA-GCCCGA---AA---TCATSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA..............................................................................................................................21120419.00204198302572275231156210221031358308731312
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCC...............................................................................................................................2019569.009569152620849150749905915028700010
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA.............................................................................................................................2216139.00613990153448542630234601141611601315
...............................................................................................................................................................GGTATCCACTGTAGGCCTATATG..............................................................................................................................................................2313611.00361110372622973170053023101000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGC................................................................................................................................1912368.00236810000433221403140302202
.................................................................................................................................................................................................TAAGGCACGCGGTGAATG.................................................................................................................................1812061.002061910126201601110400001
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG............................................................................................................................231893.0089316315446023001012157802012
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCA..............................................................................................................................201359.0035900023831800000900001
...............................................................................................................................................................GGTATCCACTGTAGGCCTATAT...............................................................................................................................................................221192.00192151153011100300800000
...............................................................................................................................................................GGTATCCACTGTAGGCCTATA................................................................................................................................................................211192.001923501210015000002100000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT..............................................................................................................................211164.001641581010000000400000
..............................................................................................................................................................TGGTATCCACTGTAGGCCTATATG..............................................................................................................................................................241140.0014058156102000002200000
...............................................................................................................................................................GGTATCCACTGTAGGCCT...................................................................................................................................................................181137.0013712011000600000000000
.............................................................................................................................................................CTGGTATCCACTGTAGGCCT...................................................................................................................................................................201109.001091081000000000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA............................................................................................................................23184.0084506300020306203000
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCC...............................................................................................................................19182.0082000237700000000000
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA.............................................................................................................................21179.0079000237000000200101
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC..............................................................................................................................21168.00682120000000004500000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA...........................................................................................................................24161.006110000140313260400000
...............................................................................................................................................................GGTATCCACTGTAGGCCTATATGA.............................................................................................................................................................24156.0056204800000000600000
..................................................................................................................................................................................................AAGGCACGCGGTGAATGC................................................................................................................................18154.0054000025200000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG..............................................................................................................................21152.00523127200000001000000
...................................................................................................................................................................TCCACTGTAGGCCTATATG..............................................................................................................................................................19150.0050480200000000000000
.................................................................................................................................................................TATCCACTGTAGGCCTATATG..............................................................................................................................................................21135.00352401100000000000000
................................................................................................................................................................GTATCCACTGTAGGCCTATATG..............................................................................................................................................................22132.00321401800000000000000
............................................................................................................................................................CCTGGTATCCACTGTAGGCCT...................................................................................................................................................................21126.0026230300000000000000
...................................................................................................................................................................................................AGGCACGCGGTGAATGCCA..............................................................................................................................19124.0024000202100000100000
...............................................................................................................................................................GGTATCCACTGTAGGCCTAT.................................................................................................................................................................20123.002380500600000400000
....................................................................................................................................................................CCACTGTAGGCCTATATG..............................................................................................................................................................18121.0021200100000000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT...........................................................................................................................24116.0016200100000001300000
...............................................................................................................................................................GGTATCCACTGTAGGCCTATATGT.............................................................................................................................................................24115.001540900100000100000
...........................................................................................................................................................TCCTGGTATCCACTGTAGGCCT...................................................................................................................................................................22113.001350800000000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT.............................................................................................................................22113.001320000001000226000
.............................................................................................................................................................CTGGTATCCACTGTAGGCCC...................................................................................................................................................................20113.0013130000000000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT............................................................................................................................23113.001330000002100205000
...................................................................................................................................................................................................AGGCACGCGGTGAATGCCAA.............................................................................................................................20112.0012000001200000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAA...................................................................................................................................16111.001100000006410000000
...............................................................................................................................................................GGTATCCACTGTAGGCCC...................................................................................................................................................................18111.0011110000000000000000
...............................................................................................................................................................GGTATCCACTGTAGGCCTA..................................................................................................................................................................19110.001030200400000100000
.............................................................................................................................................................CTGGTATCCACTGTAGGCCTAT.................................................................................................................................................................2219.00990000000000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC............................................................................................................................2319.00910000000000800000
..............................................................................................................................................................TGGTATCCACTGTAGGCCTATA................................................................................................................................................................2219.00910201200000300000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT............................................................................................................................2318.00800000000000017000
..............................................................................................................................................................TGGTATCCACTGTAGGCCTATAT...............................................................................................................................................................2318.00820202200000000000
............................................................................................................................................................CCTGGTATCCACTGTAGGCCC...................................................................................................................................................................2117.00770000000000000000
...............................................................................................................................................................GGTATCCACTGTAGGCCTATAC...............................................................................................................................................................2217.00710600000000000000
....................................................................................................................................................................................................GGCACGCGGTGAATGCCA..............................................................................................................................1817.00700000600001000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC.............................................................................................................................2217.00700000000000700000
..............................................................................................................................................................TGGTATCCACTGTAGGCCT...................................................................................................................................................................1916.00640000200000000000
...............................................................................................................................................................GGTATCCACTGTAGGCCTATATGG.............................................................................................................................................................2416.00600600000000000000
...................................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGA...........................................................................................................................2216.00600000500000100000
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG............................................................................................................................2216.00600011200000200000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG.............................................................................................................................2216.00620110000000200000
.................................................................................................................................................................................................TAAGGCACGCGGTGA....................................................................................................................................1516.00600000005010000000
...................................................................................................................................................................................................AGGCACGCGGTGAATGCCAAG............................................................................................................................2115.00500010300000100000
..................................................................................................................................................................ATCCACTGTAGGCCTATATG..............................................................................................................................................................2015.00520300000000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCT...............................................................................................................................2015.00530000002000000000
...............................................................................................................................................................GGTATCCACTGTAGGCCTATATA..............................................................................................................................................................2315.00510200000000200000
.................................................................................................................................................................................................TAAGGCACGCGGTGAAT..................................................................................................................................1715.00500000001220000000
...............................................................................................................................................................GGTATCCACTGTAGGCCTATATT..............................................................................................................................................................2314.00410100000000200000
..............................................................................................................................................................TGGTATCCACTGTAGGCC....................................................................................................................................................................1814.00420000200000000000
...............................................................................................................................................................GGTATCCACTGTAGGCCTT..................................................................................................................................................................1914.00440000000000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGA................................................................................................................................1914.00400000003000001000
...............................................................................................................................................................GGTATCCACTGTAGGCCG...................................................................................................................................................................1814.00440000000000000000
..............................................................................................................................................................TGGTATCCACTGTAGGCCTAT.................................................................................................................................................................2114.00400000200110000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCA...............................................................................................................................2013.00310000000000101000
...............................................................................................................................................................GGTATCCACTGTAGGCCTATATGC.............................................................................................................................................................2413.00310200000000000000
.............................................................................................................................................................CTGGTATCCACTGTAGGCCG...................................................................................................................................................................2013.00330000000000000000
.............................................................................................................................................................CTGGTATCCACTGTAGGCCTATA................................................................................................................................................................2313.00330000000000000000
................................................................................................................................................................GTATCCACTGTAGGCCTATA................................................................................................................................................................2013.00300300000000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATTT................................................................................................................................1922.50500000001010003000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGT................................................................................................................................1912.00200000002000000000
...............................................................................................................................................................GGTATCCACTGTAGGCCTATAG...............................................................................................................................................................2212.00200200000000000000
..............................................................................................................................................................TGGTATCCACTGTAGGCCC...................................................................................................................................................................1912.00220000000000000000
...............................................................................................................................................................GGTATCCACTGTAGGCCTATATAA.............................................................................................................................................................2412.00200200000000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATTA................................................................................................................................1912.00200000000000002000
..............................................................................................................................................................TGGTATCCACTGTAGGCCTATATGT.............................................................................................................................................................2512.00200000100000001000
...................................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGAGCG........................................................................................................................2512.00200000200000000000
...................................................................................................................................................................................................AGGCACGCGGTGAATGCC...............................................................................................................................1812.00200000200000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAATT...........................................................................................................................2412.00200000001000001000
.........................................................................................................................................................TCTCCTGGTATCCACTGTAGGCC....................................................................................................................................................................2312.00200200000000000000
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAGA...........................................................................................................................2312.00200000200000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGG................................................................................................................................1911.00110000000000000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATA............................................................................................................................2311.00100000000000100000
..............................................................................................................................................................TGGTATCCACTGTAGGCCTATATGA.............................................................................................................................................................2511.00100000000000100000
...........................................................................................................................................................TCCTGGTATCCACTGTAGGCCC...................................................................................................................................................................2211.00100100000000000000
droSec2
TATTACC------GCAACTTC----------------------------------------------------------------AGTGAGCTTCGTCGTTA---TGCA--ATGA-GTAAAGCCCAAGTGTCCTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCATACCCAAT-------------GATA---------------------------------GACAGAA-ATAA--TAGACAA---------ATTTCAAATSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA..............................................................................................................................21199797.0099797138821622742468823
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCC...............................................................................................................................20144949.00449493001282126442103
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGC................................................................................................................................19119485.00194855820610819113
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA.............................................................................................................................22111729.001172911510689592549
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG............................................................................................................................2315283.00528313012222962735
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT..............................................................................................................................2111002.00100214199960
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA............................................................................................................................231463.0046396237211
...............................................................................................................................................................GGTATCCACTGTAGGCCTATATG..............................................................................................................................................................231461.0046113339946
.................................................................................................................................................................................................TAAGGCACGCGGTGAATG.................................................................................................................................181380.00380823367
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA...........................................................................................................................241291.0029141342232
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCA..............................................................................................................................201283.00283136333111
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT...........................................................................................................................241225.002252653164
..............................................................................................................................................................TGGTATCCACTGTAGGCCTATATG..............................................................................................................................................................241212.002124413371
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCA...............................................................................................................................201196.00196155185
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT............................................................................................................................231135.00135314883
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG..............................................................................................................................211134.00134333791
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC..............................................................................................................................211133.00133014092
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT.............................................................................................................................221114.0011491599
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGT................................................................................................................................191111.00111090102
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCC...............................................................................................................................19188.0088200068
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGA................................................................................................................................19165.006516058
...............................................................................................................................................................GGTATCCACTGTAGGCCTATA................................................................................................................................................................21155.0055003124
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCT...............................................................................................................................20154.005412051
...................................................................................................................................................................................................AGGCACGCGGTGAATGCCA..............................................................................................................................19145.0045901125
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG............................................................................................................................22136.0036801216
..................................................................................................................................................................................................AAGGCACGCGGTGAATGC................................................................................................................................18134.003460028
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT............................................................................................................................23133.003313029
...................................................................................................................................................................................................AGGCACGCGGTGAATGCCAAG............................................................................................................................21132.003220525
..............................................................................................................................................................TGGTATCCACTGTAGGCCTATA................................................................................................................................................................22129.0029011414
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC.............................................................................................................................22128.002810819
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC............................................................................................................................23127.0027101511
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA.............................................................................................................................21124.002414055
...................................................................................................................................................................................................AGGCACGCGGTGAATGCC...............................................................................................................................18120.002000020
.................................................................................................................................................................................................TAAGGCACGCGGTGAATT.................................................................................................................................18120.002000020
...............................................................................................................................................................GGTATCCACTGTAGGCCTATAT...............................................................................................................................................................22119.001910153
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG.............................................................................................................................22119.00190199
...................................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGT...........................................................................................................................22119.001900514
..............................................................................................................................................................TGGTATCCACTGTAGGCCTATAT...............................................................................................................................................................23115.00150087
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGC...........................................................................................................................24115.001500312
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCG...............................................................................................................................20111.00110119
...................................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGA...........................................................................................................................22111.00110038
...............................................................................................................................................................GGTATCCACTGTAGGCCTATATGA.............................................................................................................................................................24110.001000100
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAATT...........................................................................................................................2418.0080224
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGTT..........................................................................................................................2518.0080008
..............................................................................................................................................................TGGTATCCACTGTAGGCCTAT.................................................................................................................................................................2118.0081052
...............................................................................................................................................................GGTATCCACTGTAGGCCTAT.................................................................................................................................................................2018.0080062
.............................................................................................................................................................CTGGTATCCACTGTAGGCCTATA................................................................................................................................................................2317.0070106
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATA............................................................................................................................2317.0070007
...................................................................................................................................................................................................AGGCACGCGGTGAATGCCAA.............................................................................................................................2016.0060006
..............................................................................................................................................................TGGTATCCACTGTAGGCCTA..................................................................................................................................................................2016.0060015
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGG...........................................................................................................................2415.0051004
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGTT...............................................................................................................................2015.0050005
droYak3
TATTTCC------TAAACTTC----------------------------------------------------------------AGTGAGTTTCGTCGTTA---TGCA--ATGA-GTAAAGCCCAAGTGTTCTTCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTAC-----------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA..............................................................................................................................211142288.0014228815938099452392640696835516901220
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCC...............................................................................................................................20140745.0040745258518535631811212227872950010
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA.............................................................................................................................22114074.00140741424258223893124928073033110
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG............................................................................................................................2314473.004473914317155996231365181000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGC................................................................................................................................1914095.0040951377240212662463340000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC..............................................................................................................................2112757.002757202433416228200000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT..............................................................................................................................2111903.0019031716226433140720000
...............................................................................................................................................................GGTATCCACTGTAGGCCTATATG..............................................................................................................................................................2311797.0017976938820245151600000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA............................................................................................................................231830.008302144381068318410020
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCA..............................................................................................................................201568.0056803693933212410000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG..............................................................................................................................211566.0056673101110443100000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT............................................................................................................................231267.00267051468386910000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC.............................................................................................................................221215.002150462202310500100
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA...........................................................................................................................241189.0018916522329600000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC............................................................................................................................231168.0016800129492510000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATG.................................................................................................................................181163.0016323634610120000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT...........................................................................................................................241157.0015711677255510000
..............................................................................................................................................................TGGTATCCACTGTAGGCCTATATG..............................................................................................................................................................241150.0015017480318910000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT.............................................................................................................................221139.00139011114397310000
...............................................................................................................................................................GGTATCCACTGTAGGCCTATA................................................................................................................................................................211106.0010614072200000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCT...............................................................................................................................201100.0010001111226410000
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCC...............................................................................................................................19198.0098046121102900000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCA...............................................................................................................................20175.00750130244700000
...............................................................................................................................................................GGTATCCACTGTAGGCCTATAT...............................................................................................................................................................22159.005915027170000000
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA.............................................................................................................................21158.00580202072900000
...................................................................................................................................................................................................AGGCACGCGGTGAATGCCA..............................................................................................................................19153.00530234061910000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG.............................................................................................................................22149.0049032593000000
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG............................................................................................................................22139.00392129331000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT............................................................................................................................23123.0023013081100000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCACA............................................................................................................................23121.0021002321400000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCG...............................................................................................................................20121.0021000051600000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGC...........................................................................................................................24118.0018001402200000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGA................................................................................................................................19118.0018010071000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCTT..............................................................................................................................21118.0018001001700000
...............................................................................................................................................................GGTATCCACTGTAGGCCTATATGT.............................................................................................................................................................24117.001761820000000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCAC..............................................................................................................................21117.0017000141200000
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGT................................................................................................................................19115.0015000031200000
droEre2
TATTTCC------GCAGCTTC----------------------------------------------------------------AGTGAGTTTCGTCGTTA---TGCA--ATGA-GTAAAGCCCAAGTGTCCTTCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCATACCCAAT-------------GATA---------------------------------GACCAAAAGTGT--TTGAAG-GCCC-------------TSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA..............................................................................................................................211303392.003033923542220183393243054892063370
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCC...............................................................................................................................20175048.00750484671056107352141677608990
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGC................................................................................................................................19112704.001270455432661191121480
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA.............................................................................................................................22112519.00125195147613124125028565850
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG............................................................................................................................2315016.00501633431980521912432150
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC..............................................................................................................................2111841.0018412115604602320
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT..............................................................................................................................2111661.00166112152841810980
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA............................................................................................................................231810.00810294912338205510
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCA..............................................................................................................................201779.0077925711133353700
...............................................................................................................................................................GGTATCCACTGTAGGCCTATATG..............................................................................................................................................................231688.00688171325312263580
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCA...............................................................................................................................201551.005510041055050
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG..............................................................................................................................211494.00494192220742420
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA...........................................................................................................................241313.00313912523122250
.................................................................................................................................................................................................TAAGGCACGCGGTGAATG.................................................................................................................................181210.00210100173111690
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT............................................................................................................................231210.0021061731231510
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT...........................................................................................................................241199.0019971327651410
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCC...............................................................................................................................191164.0016431114101170
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT.............................................................................................................................221145.001451013441950
...................................................................................................................................................................................................AGGCACGCGGTGAATGCCA..............................................................................................................................191132.001321812401880
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC.............................................................................................................................221124.001242107280320
..............................................................................................................................................................TGGTATCCACTGTAGGCCTATATG..............................................................................................................................................................241122.00122687131870
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC............................................................................................................................23199.00990221021640
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA.............................................................................................................................21170.0070432920140
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCT...............................................................................................................................20159.0059011302430
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGA................................................................................................................................19153.005300100520
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG.............................................................................................................................22148.0048521621220
...............................................................................................................................................................GGTATCCACTGTAGGCCTATA................................................................................................................................................................21143.004339080230
..................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG............................................................................................................................22140.0040181510150
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCAC..............................................................................................................................21136.003600331020
...................................................................................................................................................................................................AGGCACGCGGTGAATGCC...............................................................................................................................18129.002910300250
..................................................................................................................................................................................................AAGGCACGCGGTGAATGC................................................................................................................................18125.002500100240
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT............................................................................................................................23123.002310601150
...............................................................................................................................................................GGTATCCACTGTAGGCCTATAT...............................................................................................................................................................22122.002214160100
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGT................................................................................................................................19121.002100002190
...................................................................................................................................................................................................AGGCACGCGGTGAATGCCAAG............................................................................................................................21120.002020311130
..............................................................................................................................................................TGGTATCCACTGTAGGCCTATA................................................................................................................................................................22116.001600020140
...............................................................................................................................................................GGTATCCACTGTAGGCCTAT.................................................................................................................................................................20115.00151212090
...................................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGT...........................................................................................................................22114.001410201100
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCG...............................................................................................................................20112.00120060150
.................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGC...........................................................................................................................24112.00120301080
...................................................................................................................................................................................................AGGCACGCGGTGAATGCCAA.............................................................................................................................20111.00111102070

Generated: 10/20/2015 at 07:47 PM