ID:

dmo_97

 Coordinate:

scaffold_6541:2424399-2424489 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.3 -17.3 -17.3

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
Homo8DNAhAT-Ac-
mature
  1. dmo_94  scaffold_6498:2251948-2251972 -
  2. dmo_97  scaffold_6541:2424465-2424489 +
star
  1. dmo_94  scaffold_6498:2252012-2252038 -
  2. dmo_97  scaffold_6541:2424399-2424425 +

Sense Strand Reads

AAGCCAAAAACACATGGTATGATTAATGACACTGATACTGCCTTTACTCCTGATGCTTTTTTGGTGACTTCGTCAAAATGTTTTAAAATGTCGCATAAGTCTGCGATGCAATCATATTGGTCGTTATTCAAAGTTGATGGTGCTTTTGAACAATTTAAAAGGACGTGACCGATATCATCCCTGACCAATAA
***********************************.((.(((..((....((((((..((((((((....))))))))...........((((((......)))))))).))))))..))).))..((((((((.......)).))))))......*********************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V041
embryo
 V110
male body		 V049
head
....................................................................................................................TTGGTCGTTATTCAAAGTTGATGGTGC................................................ 27 0 2 145.50 291 188 103 0 0 0
....................................................................................................................TTGGTCGTTATTCAAAGTTGATGGT.................................................. 25 0 2 67.50 135 58 21 25 30 1
....................................................................................................................TTGGTCGTTATTCAAAGTTGATGG................................................... 24 0 2 56.00 112 56 4 32 20 0
....................................................................................................................TTGGTCGTTATTCAAAGTTGATGGTG................................................. 26 0 2 36.50 73 69 4 0 0 0
...................TGATTAATGACACTGATACTGCCTT................................................................................................................................................... 25 0 9 19.00 171 145 25 1 0 0
.................................................................................................................................................TTGAACAATTTAAAAGGACGTGACCGA................... 27 0 2 13.00 26 25 1 0 0 0
....................................................................................................................TTGGTCGTTATTCAAAGTTGATGGTGCT............................................... 28 0 2 10.50 21 12 9 0 0 0
................................................................................................................................................TTTGAACAATTTAAAAGGACGTGACCGA................... 28 0 2 9.00 18 16 2 0 0 0
..................................................TGATGCTTTTTTGGTGACTTCGTCAAA.................................................................................................................. 27 0 2 9.00 18 12 2 4 0 0
...................TGATTAATGACACTGATACTGCCTTTAC................................................................................................................................................ 28 0 9 8.11 73 66 7 0 0 0
....................................................................................................................TTGGTCGTTATTCAAAGTTGATGGTGCTT.............................................. 29 0 2 7.00 14 5 9 0 0 0
...................TGATTAATGACACTGATACTGCCTTT.................................................................................................................................................. 26 0 9 6.89 62 58 4 0 0 0
....................................................................................................................TGGGTCGTTATTCAAAGTTGATGGTGC................................................ 27 1 2 6.50 13 0 13 0 0 0
...............................................TCCTGATGCTTTTTTGGTGACTTCG....................................................................................................................... 25 0 2 6.00 12 12 0 0 0 0
...................TGATTAATGACACTGATACTGCCTTTA................................................................................................................................................. 27 0 9 5.22 47 42 5 0 0 0
...................TGATTAATGACACTGATACTGCCT.................................................................................................................................................... 24 0 9 4.78 43 25 18 0 0 0
..................................................TGATGCTTTTTTGGTGACTTCGTCA.................................................................................................................... 25 0 2 4.00 8 7 0 1 0 0
.................................................................................................................................................TTGAACAATTTAAAAGGACGTGACC..................... 25 0 2 4.00 8 3 5 0 0 0
....................................................................................................................TTGGTCGTTATTCAAAGTTGATGGGGC................................................ 27 1 2 3.50 7 1 6 0 0 0
.....................................................................................................................TGGTCGTTATTCAAAGTTGATGGTGC................................................ 26 0 2 3.50 7 6 1 0 0 0
..................................................TGATGCTTTTTTGGTGACTTCGTCAAAA................................................................................................................. 28 0 2 3.50 7 6 0 0 1 0
....................................................................................................................TTGGTCGTTATTCAAAGTTGATG.................................................... 23 0 2 3.00 6 6 0 0 0 0
.....................................................................................................................TGGTCGTTATTCAAAGTTGATGG................................................... 23 0 2 3.00 6 6 0 0 0 0
.................................................................................................................................................TTGAACAATTTAAAAGGACGTGACCGATA................. 29 0 2 2.50 5 4 1 0 0 0
....................................................................................................................TTGGTCGTTATTCAAAGTTGATGGTGCC............................................... 28 1 2 2.50 5 0 5 0 0 0
...............................................TCCTGATGCTTTTTTGGTGACTTC........................................................................................................................ 24 0 2 2.50 5 3 2 0 0 0
.....................................................TGCTTTTTTGGTGACTTCGTCAAAATG............................................................................................................... 27 0 2 2.00 4 4 0 0 0 0
....................................................................................................................TTGTTCGTTATTCAAAGTTGATGGTGC................................................ 27 1 2 2.00 4 0 4 0 0 0
..................................................TGATGCTTTTTTGGTGACTTCGTC..................................................................................................................... 24 0 2 2.00 4 3 1 0 0 0
................................................................................................................................................TTTGAACAATTTAAAAGGACGTGACC..................... 26 0 2 2.00 4 1 3 0 0 0
..........................................................................................................TGCAATCATATTGGTCGTTATTCAAAG.......................................................... 27 0 4 2.00 8 7 1 0 0 0
....................................................................................................................TGGGTCGTTATTCAAAGTTGATGGTG................................................. 26 1 2 2.00 4 0 4 0 0 0
.......................TAATGACACTGATACTGCCTTTACTCC............................................................................................................................................. 27 0 9 1.78 16 7 9 0 0 0
...................TGATTAATGACACTGATACTGCC..................................................................................................................................................... 23 0 9 1.56 14 7 7 0 0 0
.................................................................................................................................................TTGAACAATTTAAAAGGACGTGACCG.................... 26 0 2 1.50 3 3 0 0 0 0
...............................................................................................................................................TTTTGAACAATTTAAAAGGACGTGA....................... 25 0 2 1.50 3 2 1 0 0 0
.............................................................................................................................ATTCAAAGTTGATGGTGC................................................ 18 0 2 1.50 3 3 0 0 0 0
....................................................................................................................TGGGTCGTTATTCAAAGTTGATGGT.................................................. 25 1 2 1.50 3 0 3 0 0 0
...............................................................................................................................................TTTTGAACAATTTAAAAGGACGTGACCGA................... 29 0 2 1.50 3 2 1 0 0 0
...................TTATTAATGACACTGATACTGCCTT................................................................................................................................................... 25 1 9 1.22 11 1 10 0 0 0
....................GATTAATGACACTGATACTGCCTT................................................................................................................................................... 24 0 9 1.22 11 11 0 0 0 0
..............................................................................TGTTTTAAAATGTCGCATAAGTCTGC....................................................................................... 26 0 5 1.20 6 5 1 0 0 0
................................................................................................................................................TTTGAACAATTTAAAAGGACGTGACCG.................... 27 0 2 1.00 2 2 0 0 0 0
..........................................................................................................................................................TTAAAAGGACGTGACCGATATCATCCC.......... 27 0 2 1.00 2 1 1 0 0 0
....................................................................................................................TTGGTCGTTATTCAACGTTGATGG................................................... 24 1 2 1.00 2 0 0 1 1 0
.....................................................................................................................TGGTCGTTATTCAAAGTTGATGGTGCT............................................... 27 0 2 1.00 2 2 0 0 0 0
....................................................................................................................TTGGTGGTTATTCAAAGTTGATGGTGC................................................ 27 1 2 1.00 2 1 1 0 0 0
.....................................................................................................................TGGTCGTTATTCAAAGTTGATGGT.................................................. 24 0 2 1.00 2 1 1 0 0 0
....................................................................................................................TTGGTCTTTATTCAAAGTTGATGGTGC................................................ 27 1 2 1.00 2 0 2 0 0 0
..................................................................................................................................................TGAACAATTTAAAAGGACGTGACCG.................... 25 0 2 1.00 2 2 0 0 0 0
..............................................................................TGTTTTAAAATGTCGCATAAGTCT......................................................................................... 24 0 5 1.00 5 2 3 0 0 0
............................................TACTCCTGATGCTTTTTTGGTGACTTC........................................................................................................................ 27 0 2 1.00 2 2 0 0 0 0
....................................................................................................................TTGGTCGGTATTCAAAGTTGATGGT.................................................. 25 1 2 1.00 2 0 0 2 0 0
...................................................GATGCTTTTTTGGTGACTTCGTCAAA.................................................................................................................. 26 0 2 1.00 2 2 0 0 0 0
.................................................................................................................................................TTGAACAATTTAAAAGGACGTGACCGAT.................. 28 0 2 1.00 2 2 0 0 0 0
...............................................................................................................................................TTTTGAACAATTTAAAAGGACGTGAC...................... 26 0 2 1.00 2 1 1 0 0 0
..................................................................................................................................................TGAACAATTTAAAAGGACGTGACCGA................... 26 0 2 1.00 2 2 0 0 0 0
....................................................................................................................TTGGTCGTTATTCAAAGTTGATCG................................................... 24 1 2 1.00 2 0 0 1 1 0
...............................................TCCTGATGCTTTTTTGGTGACTTCGTC..................................................................................................................... 27 0 2 1.00 2 2 0 0 0 0
................................................................................................................................................TTTGAACAATTTAAAAGGACGTGA....................... 24 0 2 1.00 2 2 0 0 0 0
....................................................................................................................TTGGTCGTTATTCAAAGTTGATGGG.................................................. 25 1 2 1.00 2 1 1 0 0 0
....................................................................................................................TTGGTCGTTATTCAAAGTTGATTGTGC................................................ 27 1 2 1.00 2 0 2 0 0 0
..........................................................................................................TGCAATCATATTGGTCGTTATTCAAAGT......................................................... 28 0 2 1.00 2 1 1 0 0 0
....................................................................................................................TTGGTCGTTATTCAAAGTTGATGGTAC................................................ 27 1 2 1.00 2 0 2 0 0 0
.....................................................................................................................TGGTCGTTATTCAAAGTTGATGGTG................................................. 25 0 2 1.00 2 2 0 0 0 0
.....................................................TGCTTTTTTGGTGACTTCGTCAAAA................................................................................................................. 25 0 2 1.00 2 2 0 0 0 0
....................................................................................................................TTGGTCGTTATTCAAAGTTGATGGTC................................................. 26 1 2 1.00 2 1 0 0 1 0
...............................................................................................................................................TTTTGAACAATTTAAAAGGACGTG........................ 24 0 2 1.00 2 2 0 0 0 0
...................................................................................................................CTTGGTCGTTATTCAAAGTTGATGGT.................................................. 26 1 2 1.00 2 0 1 1 0 0
....................................................................................................................TTGGTCGTTATTCAAAGTTGATGGC.................................................. 25 1 2 1.00 2 0 2 0 0 0
...................TGATTAATGACACTGATACTGCCTTTACT............................................................................................................................................... 29 0 9 0.78 7 7 0 0 0 0
...............................................................................................TAAGTCTGCGATGCAATCATATTGG....................................................................... 25 0 3 0.67 2 2 0 0 0 0
...................TGATTAATGACACTGATACTGCCTTCAC................................................................................................................................................ 28 1 9 0.56 5 5 0 0 0 0
...................TGATTAATGACACTGATACTGCCC.................................................................................................................................................... 24 1 9 0.56 5 0 5 0 0 0
...................TTATTAATGACACTGATACTGCCT.................................................................................................................................................... 24 1 9 0.56 5 0 5 0 0 0
...................................................................................................................................................GAACAATTTAAAAGGACGTGACCGA................... 25 0 2 0.50 1 1 0 0 0 0
....................................................................................................................................................AACAATTTAAAAGGACGTGACCGA................... 24 0 2 0.50 1 1 0 0 0 0
....................................................................................................................TTGGTCGTTATTCAAAGTTGAT..................................................... 22 0 2 0.50 1 1 0 0 0 0
....................................................................................................................TGGGTCGTTATTCAAAGTTGATGGTGCTT.............................................. 29 1 2 0.50 1 0 1 0 0 0
....................................................................................................................TTTGTCGTTATTCAAAGTTGATGGT.................................................. 25 1 2 0.50 1 1 0 0 0 0
......................................................................................................................GGTCGTTATTCAAAGTTGATGGTG................................................. 24 0 2 0.50 1 1 0 0 0 0
........................................................................................................................TGGTTATTCAAAGTTGATGGTGCT............................................... 24 1 2 0.50 1 0 1 0 0 0
...............................................TCCTGATGCTTTTTTGGTGACTTCGT...................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0
....................................................................................................................TTGGTCGTTATTCAAGGTTGATTG................................................... 24 2 2 0.50 1 0 0 1 0 0
....................................................................................................................TTGGTCGTTATTCCAAGTTGAAGGA.................................................. 25 3 2 0.50 1 0 0 1 0 0
..................................................................................................................TATTGGTCGTTATTCAAAGTTGATGG................................................... 26 0 2 0.50 1 0 0 0 1 0
...................................................GATGCTTTTTTGGTGACTTCGTCAAAA................................................................................................................. 27 0 2 0.50 1 1 0 0 0 0
....................................................................................................................TGGGTCGTTATTCAAAGTTGATGG................................................... 24 1 2 0.50 1 0 1 0 0 0
..........................................................................................................................................................TTAAAAGGACGTGACCGATATCATCCCC......... 28 1 2 0.50 1 0 1 0 0 0
.................................................................................................................................................TTGTACAATTTAAAAGGACGTGACCGA................... 27 1 2 0.50 1 0 1 0 0 0
..........................................TTTACTCCTGATGCTTTTTTGGTGACTTC........................................................................................................................ 29 0 2 0.50 1 1 0 0 0 0
....................................................................................................................TTGGTCGTTATTCAAAGTTGATGGGGCTT.............................................. 29 1 2 0.50 1 0 1 0 0 0
....................................................................................................................TTCGTCGTTATTCAAAGTTGATGGTG................................................. 26 1 2 0.50 1 0 1 0 0 0
....................................................................................................................TTTGTCGTTATTCAAAGTTGATGGTG................................................. 26 1 2 0.50 1 1 0 0 0 0
....................................................................................................................TTGGTCGTTATCCAAAGTTGATGGT.................................................. 25 1 2 0.50 1 1 0 0 0 0
...............................................................................................................................................TTTTGAACAATTTAAAAGGACGTGACCG.................... 28 0 2 0.50 1 0 1 0 0 0
............................................................................................................................TATTCAAAGTTGATGGTGC................................................ 19 0 2 0.50 1 1 0 0 0 0
................................................................................................................................................TTTGAACAATTTAAAAGGACGTGACCGT................... 28 1 2 0.50 1 1 0 0 0 0
.........................................................................................................................................................TTTAAAAGGACGTGACCGATATCATC............ 26 0 2 0.50 1 0 1 0 0 0
.................................................................................................................ATATTGGTCGTTATTCAAAGTTGA...................................................... 24 0 2 0.50 1 1 0 0 0 0
..................................................................................................................TATTGGTCGTTATTCAAAGTTGATGGT.................................................. 27 0 2 0.50 1 0 1 0 0 0
....................................................................................................................TTGGTCGTTATTCAAAGTTGATGGTGCTC.............................................. 29 1 2 0.50 1 0 1 0 0 0
....................................................................................................................TGGGTCGTTATTCAAAGTTGA...................................................... 21 1 2 0.50 1 0 1 0 0 0
..................................................TGATGCTTTTTTGGTGACTTCGTTG.................................................................................................................... 25 2 2 0.50 1 0 0 1 0 0
...............................................TCCTGATGCTTTTTTGGCGACTTC........................................................................................................................ 24 1 2 0.50 1 1 0 0 0 0
....................................................................................................................TTGGTCGTTATTCAAAGTTTATGGTGCTT.............................................. 29 1 2 0.50 1 0 1 0 0 0
....................................................................................................................TTGGTCGTTATGCAAAGTTGATGGTG................................................. 26 1 2 0.50 1 1 0 0 0 0
....................................................................................................................TTCGTCGTTATTAAAAGTTGATGGTGC................................................ 27 2 2 0.50 1 0 1 0 0 0
...............................................TCCTGATGCTTTTTTGGTGACTT......................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
..................................................TGATGCTTTTTTGGTGACTTCGTCAAT.................................................................................................................. 27 1 2 0.50 1 1 0 0 0 0
....................................................................................................................TTGGTCGTTATTCAAAGTTGATGGGAC................................................ 27 2 2 0.50 1 0 1 0 0 0
........................................................................................................................TCGTTATTCAAAGTTGATGGTG................................................. 22 0 2 0.50 1 1 0 0 0 0
......................................................................................................................GGTCGTTATTCAAAGTTGATGGTGC................................................ 25 0 2 0.50 1 1 0 0 0 0
.....................................................................................................................................................ACAATTTAAAAGGACGTGACC..................... 21 0 2 0.50 1 0 1 0 0 0
....................................................................................................................TTGGTCGTTATTCAAAGTTTATGG................................................... 24 1 2 0.50 1 0 0 1 0 0
....................................................................................................................TTGGTCGTTATTCAAAGTTGATGGGGCTC.............................................. 29 2 2 0.50 1 0 1 0 0 0
....................................................................................................................TTGGTCGTTATTCAAAGTTGATTG................................................... 24 1 2 0.50 1 0 0 1 0 0
.....................................................................................................................TGGTCGTTATTCAAAGTTGATGGTGCTT.............................................. 28 0 2 0.50 1 1 0 0 0 0
....................................................................................................................TTGGTCGTTATTCGAAGTTGATGGTGC................................................ 27 1 2 0.50 1 1 0 0 0 0
....................................................................................................................TTGGTCGTTATTCAAAGTTTATGGT.................................................. 25 1 2 0.50 1 0 0 1 0 0
.........................................................................................................................................................TTTAAAAGGACGTGACCGATATCAT............. 25 0 2 0.50 1 1 0 0 0 0
....................................................................................................................TTGGTCGTTATTCAAAGTTGATGGAGCT............................................... 28 1 2 0.50 1 0 1 0 0 0
...................................................................................................................CGTGGTCGTTATTCAAAGTTGATGGTGC................................................ 28 2 2 0.50 1 0 1 0 0 0
....................................................................................................................TTGGTCGTTATTCAAAGTTGA...................................................... 21 0 2 0.50 1 0 1 0 0 0
....................................................................................................................TTGGTCGTTATTCAAAGTTGATGGCGCTT.............................................. 29 1 2 0.50 1 0 1 0 0 0
....................................................................................................................TTGGTCGTTATTCAAAGTTG....................................................... 20 0 2 0.50 1 1 0 0 0 0
...............................................................................................................................................TTTTGAACAATTTAAAAGGACGTGACC..................... 27 0 2 0.50 1 0 1 0 0 0
....................................................................................................................TTGGTCGTTATTCAAAGTTGATGGGG................................................. 26 1 2 0.50 1 0 1 0 0 0
..........................................................................................................................GTTATTCAAAGTTGATGGTGC................................................ 21 0 2 0.50 1 1 0 0 0 0
...........................................................................................................................TTATTCAAAGTTGATGGTGCTTTTG........................................... 25 0 2 0.50 1 1 0 0 0 0
............................................................TTGGTGACTTCGTCAAAATGTTT............................................................................................................ 23 0 2 0.50 1 1 0 0 0 0
.....................................................................................................................TGGTCGTTATTCAAAGTTGACGG................................................... 23 1 2 0.50 1 1 0 0 0 0
....................................................................................................................TTGGTCGTTATACAAAGTTGATGG................................................... 24 1 2 0.50 1 1 0 0 0 0
....................................................................................................................TTGGTCGTTATTCAAAGTTGATGGTGCCT.............................................. 29 1 2 0.50 1 0 1 0 0 0
...................................................................................................................CTTGGTCGTTATTCAAAGTTGATGGTGC................................................ 28 1 2 0.50 1 0 1 0 0 0
....................................................................................................................TTGGTCGTTATGCAAAGTTGATGGTGC................................................ 27 1 2 0.50 1 1 0 0 0 0
.......................................................................................................................................................AATTTAAAAGGACGTGACCG.................... 20 0 2 0.50 1 1 0 0 0 0
...............................................................................................................TCATATTGGTCGTTATTCAAAGTTG....................................................... 25 0 2 0.50 1 1 0 0 0 0
..............................................................................................................................TTCAAAGTTGATGGTGCTTTTGAACA....................................... 26 0 2 0.50 1 1 0 0 0 0
............................................................TTGGTGACTTCGTCAAAATGTT............................................................................................................. 22 0 2 0.50 1 1 0 0 0 0
..............................................CTCCTGATGCTTTTTTGGTGAC........................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0
..........................................................................................................................................................TTAAAAGGACGTGACCGATATCATCCCTG........ 29 0 2 0.50 1 1 0 0 0 0
................................................................................................................................................TTTGAACAATTTAAAAGGACGTGACCGAT.................. 29 0 2 0.50 1 1 0 0 0 0
....................................................................................................................TTAGTCGTTATTCAAAGTTGATGGT.................................................. 25 1 2 0.50 1 0 0 0 1 0
....................................................................................................................TTGTTCTTTATTCAAAGTTGATGG................................................... 24 2 2 0.50 1 0 1 0 0 0
..........................................................................................................................................................TGAAAAGGACGTGACCAATATCATCCCT......... 28 2 2 0.50 1 0 1 0 0 0
........................................................................................................................................ATGGTGCTTTTGAACAATTTAAAAGG............................. 26 0 2 0.50 1 1 0 0 0 0
....................................................................................................................TTCGTCGTTATTCAAAGTTGATGGT.................................................. 25 1 2 0.50 1 0 1 0 0 0
........................................................................................................................TCTTTATTCAAAGTTGATGGTGCT............................................... 24 1 2 0.50 1 0 1 0 0 0
....................................................................................................................TTGGTCGTTATTCAAAGTTAATGGC.................................................. 25 2 2 0.50 1 0 1 0 0 0
..................................................................................................................................................TGAACAATTTACAAGGACGTGACCGA................... 26 1 2 0.50 1 1 0 0 0 0
.....................................................................................................................................TTGATGGTGCTTTTGAACAATTTAAAAG.............................. 28 0 2 0.50 1 1 0 0 0 0
.........................................................................................................................................TGGTGCTTTTGAACAATTTAAAAGGAC........................... 27 0 2 0.50 1 1 0 0 0 0
............................................................................................................................................................AAAAGGACGTGACCGATATCATCCC.......... 25 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................................TTGAACAATTTAAAAGGACGTCACCGA................... 27 1 2 0.50 1 1 0 0 0 0
.............................................................................................................................ATTCAAAGTTGATGGTGCT............................................... 19 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................................................GAAGTGACCGATATCATCCCTGACC..... 25 1 2 0.50 1 0 1 0 0 0
................................................................................................................................................TTTGAACAATTTAAAAGGACGTGACCGAA.................. 29 1 2 0.50 1 1 0 0 0 0
...................................................GATGCTTTTTTGGTGACTTCGTCAA................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
..................................................TGATGCTTTTTTGGTGACTTCGTCAAAAT................................................................................................................ 29 0 2 0.50 1 1 0 0 0 0
............................................................TTGGTGACTTCGTCAAAATGTTTTAAA........................................................................................................ 27 0 2 0.50 1 0 0 0 1 0
....................................................................................................................TCGGTCGTTATTCAAAGTTGATGGTGC................................................ 27 1 2 0.50 1 0 1 0 0 0
..................................................................................................................TATTGGTCGTTATTCAAAGTTGAT..................................................... 24 0 2 0.50 1 1 0 0 0 0
................................................................................................................................................TTTGAACAATTTAAAAGGACGTG........................ 23 0 2 0.50 1 1 0 0 0 0
..........................................TTTACTCCTGATGCTTTTTTGGTGACTC......................................................................................................................... 28 1 2 0.50 1 1 0 0 0 0
..................................................TGATGCTTTTTTGGTGACTTCGTCAAAAA................................................................................................................ 29 1 2 0.50 1 1 0 0 0 0
....................................................................................................................TTGGTCGTTATTCACAGTTGATGGT.................................................. 25 1 2 0.50 1 0 0 1 0 0
....................................................................................................................TTGGTCGTTATTCAAAGTT........................................................ 19 0 2 0.50 1 1 0 0 0 0
....................................................................................................................TTGGTCGTTATTCAAAGTTGATGTTGC................................................ 27 1 2 0.50 1 0 1 0 0 0
..................................................................................................................................................TGAACAATTTAAAAGGACGTGACCGAT.................. 27 0 2 0.50 1 1 0 0 0 0
....................GATTAATGACACTGATACTGCCTTTAC................................................................................................................................................ 27 0 9 0.44 4 4 0 0 0 0
...................TTATTAATGACACTGATACTGCCTC................................................................................................................................................... 25 2 9 0.44 4 0 4 0 0 0
.................TATGATTAATGACACTGATACTGCC..................................................................................................................................................... 25 0 9 0.44 4 1 3 0 0 0
...................TGATTAATGACACTGATACTGCCTTCA................................................................................................................................................. 27 1 9 0.44 4 4 0 0 0 0
.............................CACTGATACTGCCTTTACTCCTGATGC....................................................................................................................................... 27 0 7 0.43 3 2 1 0 0 0
................................................................................TTTTAAAATGTCGCATAAGTCT......................................................................................... 22 0 5 0.40 2 2 0 0 0 0
..............................................................................................ATAAGTCTGCGATGCAATCATATTG........................................................................ 25 0 3 0.33 1 1 0 0 0 0
....................GATTAATGACACTGATACTGCCT.................................................................................................................................................... 23 0 9 0.33 3 3 0 0 0 0
.......................TAATGACACTGATACTGCCTTTACT............................................................................................................................................... 25 0 9 0.33 3 0 3 0 0 0
....................................................................................................................TGGGTCGTTATTCAAAGTTGATGGTT................................................. 26 2 3 0.33 1 0 1 0 0 0
............................................................................................................................CATTCAAAGTTGATGGTGC................................................ 19 1 3 0.33 1 0 1 0 0 0
....................................................................................................................TTGGTCGTTATTCAAAGTTGATGGTTT................................................ 27 2 3 0.33 1 1 0 0 0 0
......................TTAATGACACTGATACTGCCTTTAC................................................................................................................................................ 25 0 9 0.33 3 3 0 0 0 0
...............................................................................................TAAGTCTGCGATGCAATCATA........................................................................... 21 0 3 0.33 1 1 0 0 0 0
.......................TAATGACACTGATACTGCCTTTACTC.............................................................................................................................................. 26 0 9 0.33 3 2 1 0 0 0
...................TGATTAATGACACTGATAC......................................................................................................................................................... 19 0 9 0.33 3 1 1 1 0 0
..................................................TTATGCTTTTTTGGTGACTTCGTCAAAA................................................................................................................. 28 1 3 0.33 1 0 1 0 0 0
..........................TGACACTGATACTGCCTTTACTCCTGA.......................................................................................................................................... 27 0 7 0.29 2 2 0 0 0 0
..........................................................................................................TGCAATCATATCGGTCGTTATTCAAAG.......................................................... 27 1 4 0.25 1 1 0 0 0 0
...........................................................................................................GCAATCATATTGGTCGTTATTCAA............................................................ 24 0 4 0.25 1 1 0 0 0 0
...........................................................................................................GCAATCATATTGGTCGTTATTCAAAG.......................................................... 26 0 4 0.25 1 1 0 0 0 0
..........................................................................................................TGCAATCATATTGGTCGTTATTCA............................................................. 24 0 4 0.25 1 1 0 0 0 0
...................TGATTAATGACACTGATACTGACTT................................................................................................................................................... 25 1 9 0.22 2 0 2 0 0 0
...................TGATTAATGACACTGATACTGCCTTC.................................................................................................................................................. 26 1 9 0.22 2 2 0 0 0 0
...................TTATTAATGACACTGATACTGCCTTT.................................................................................................................................................. 26 1 9 0.22 2 0 2 0 0 0
...................TGATTAATGACACTGATACTG....................................................................................................................................................... 21 0 9 0.22 2 2 0 0 0 0
..........................TGACACTGATACTGCCTTTACTCC............................................................................................................................................. 24 0 9 0.22 2 1 1 0 0 0
................GTATGATTAATGACACTGATACTGCC..................................................................................................................................................... 26 0 9 0.22 2 0 2 0 0 0
..........................TGACACTGATACTGCCTTTACTCCTG........................................................................................................................................... 26 0 9 0.22 2 2 0 0 0 0
.................TATGATTAATGACACTGATACTGCCTT................................................................................................................................................... 27 0 9 0.22 2 2 0 0 0 0
.........................ATGACACTGATACTGCCTTTAC................................................................................................................................................ 22 0 9 0.22 2 2 0 0 0 0
......................TTAATGACACTGATACTGCCTTTACTCC............................................................................................................................................. 28 0 9 0.22 2 2 0 0 0 0
...................TGATTAATGACACTGATACTGCCTC................................................................................................................................................... 25 1 9 0.22 2 0 2 0 0 0
....................GATTAATGACACTGATACTGCCTTT.................................................................................................................................................. 25 0 9 0.22 2 2 0 0 0 0
...................TGATTAATGACACTGATACTGC...................................................................................................................................................... 22 0 9 0.22 2 2 0 0 0 0
...................TTATTAATGACACTGATACTGCC..................................................................................................................................................... 23 1 9 0.22 2 0 2 0 0 0
...............................................................................GTTTTAAAATGTCGCGTAAGTCTGCG...................................................................................... 26 1 5 0.20 1 1 0 0 0 0
................................................................................TTTTAAAATGTCGCATAAGTCTGC....................................................................................... 24 0 5 0.20 1 1 0 0 0 0
..............................................................................TGTTTTAAAATGTCGCATAAGTCTGCC...................................................................................... 27 1 5 0.20 1 1 0 0 0 0
.................................................................................TTTAAAATGTCGCATAAGTCTGCGATG................................................................................... 27 0 5 0.20 1 0 1 0 0 0
....................................................................TTCGTCAAAATGTTTTAAAATGTCGCA................................................................................................ 27 0 6 0.17 1 1 0 0 0 0
.....................................................................TCGTCAAAATGTTTTAAAATGTCGCA................................................................................................ 26 0 6 0.17 1 1 0 0 0 0
..............................................................................TTTTTTAAAATGTCGCATAAGTCT......................................................................................... 24 1 6 0.17 1 0 1 0 0 0
......................................................................CGTCAAAATGTTTTAAAATGTCGCA................................................................................................ 25 0 6 0.17 1 1 0 0 0 0
................................TGATACTGCCTTTACTCCTGATGCTT..................................................................................................................................... 26 0 7 0.14 1 1 0 0 0 0
...............................CTGATACTGCCTTTACTCCTGATGCT...................................................................................................................................... 26 0 7 0.14 1 1 0 0 0 0
...................................................................................................................GTTGGTCGTTATTCAAAGTTGATGG................................................... 25 1 7 0.14 1 1 0 0 0 0
..................................ATACTGCCTTTACTCCTGATGC....................................................................................................................................... 22 0 7 0.14 1 0 1 0 0 0
..............................AGTGATACTGCCTTTACTCCTGATGCC...................................................................................................................................... 27 2 7 0.14 1 0 1 0 0 0
.............................CAATGATACTGCCTTTACTCCTGAT......................................................................................................................................... 25 1 7 0.14 1 0 1 0 0 0
...............................CTGATACTGCCTTTACTCCTGATGC....................................................................................................................................... 25 0 7 0.14 1 0 1 0 0 0
.............................CACTGATACTGCCTTTACTCCTGA.......................................................................................................................................... 24 0 7 0.14 1 0 1 0 0 0
...................................................................................................................GTTGGTCGTTATTCAAAGTTGATGGTGCT............................................... 29 1 7 0.14 1 1 0 0 0 0
..............................ACTGATACTGCCTTTACTCCTGATGC....................................................................................................................................... 26 0 7 0.14 1 1 0 0 0 0
..................................................................................TGAAAATGTCGCATAAGTCTGCGAT.................................................................................... 25 1 8 0.13 1 0 1 0 0 0
....................................................................................................................TTGGTCGTTATTCAAAGCTGATGGTG................................................. 26 1 8 0.13 1 0 1 0 0 0
....................................................................TTCGTCAAAGTGTTGTGAAATG..................................................................................................... 22 3 8 0.13 1 0 1 0 0 0
.......................TGATGACACTGATACTGCCTTTACTCC............................................................................................................................................. 27 1 9 0.11 1 0 1 0 0 0
....CAAAAACACATGGTATGATTAATG................................................................................................................................................................... 24 0 9 0.11 1 1 0 0 0 0
..............TGGTATGATTAATGACACTGATACTGCC..................................................................................................................................................... 28 0 9 0.11 1 1 0 0 0 0
........AGCACATGGTATGATTAATGACACTG............................................................................................................................................................. 26 1 9 0.11 1 0 1 0 0 0
...................TGATTAATGACACTGATACTGCCTTTACC............................................................................................................................................... 29 1 9 0.11 1 1 0 0 0 0
.......................TAATGACACTGATACTGCCTTTACC............................................................................................................................................... 25 1 9 0.11 1 0 1 0 0 0
.......................TAATGACACTGATACTGCCTT................................................................................................................................................... 21 0 9 0.11 1 1 0 0 0 0
..........................................................................................................................................................TTAAAAGGACGTGACCGA................... 18 0 9 0.11 1 1 0 0 0 0
...................TGATTAATGACACTGATATTGCCTT................................................................................................................................................... 25 1 9 0.11 1 1 0 0 0 0
...................TGATTAATGAAACTGATACTGCC..................................................................................................................................................... 23 1 9 0.11 1 0 1 0 0 0
.......................TAATGACACTGATACTGCCTTTAC................................................................................................................................................ 24 0 9 0.11 1 1 0 0 0 0
...................TTATTAATGACACTGATACTCCCTT................................................................................................................................................... 25 2 9 0.11 1 0 1 0 0 0
...................TTATTAATGAAACTGATACTGCCT.................................................................................................................................................... 24 2 9 0.11 1 0 1 0 0 0
......................TTAATGACACTGATACTGCCTTTACTC.............................................................................................................................................. 27 0 9 0.11 1 0 1 0 0 0
....................GATTAATGACACTGATACTGCCTTTA................................................................................................................................................. 26 0 9 0.11 1 1 0 0 0 0
...................TGATTAATGACACTGATACTCCCTT................................................................................................................................................... 25 1 9 0.11 1 0 1 0 0 0
....................GATTAATGACAATGATACTGCCT.................................................................................................................................................... 23 1 9 0.11 1 1 0 0 0 0
....................................................................................................................TTGGTCGTTATTCAAAGATGAGCGT.................................................. 25 3 9 0.11 1 0 0 1 0 0
...............GGTATGATTAATGACACTGATACTGCC..................................................................................................................................................... 27 0 9 0.11 1 1 0 0 0 0
...................TGATTAGTGACACTGATACTGCCTTTA................................................................................................................................................. 27 1 9 0.11 1 1 0 0 0 0
..............TGGTATGATTAATGACACTGATACTGC...................................................................................................................................................... 27 0 9 0.11 1 0 1 0 0 0
...................TGACTAATGACACTGATACTGCCTT................................................................................................................................................... 25 1 9 0.11 1 0 1 0 0 0
........AACACATGGTATGATTAATGACACTGA............................................................................................................................................................ 27 0 9 0.11 1 0 1 0 0 0
...................TTATTAATGACACTGATACTGCCC.................................................................................................................................................... 24 2 9 0.11 1 0 1 0 0 0
...................TGATTAATGACACTGTTACTGCCTT................................................................................................................................................... 25 1 9 0.11 1 1 0 0 0 0
...................TGACTAATGACACTGATACTGCCT.................................................................................................................................................... 24 1 9 0.11 1 0 1 0 0 0
...................TGATTAATGACACTGATACT........................................................................................................................................................ 20 0 9 0.11 1 1 0 0 0 0
...........................GACACTGATACTGCCTTTAC................................................................................................................................................ 20 0 9 0.11 1 1 0 0 0 0
....................GATTAATGACACTGATACTGC...................................................................................................................................................... 21 0 9 0.11 1 1 0 0 0 0
...................TTATTAATGTCACTGATACTGCCTT................................................................................................................................................... 25 2 9 0.11 1 0 1 0 0 0
........................................................................................................................................................ATTTAAAAGGACGTGACCGA................... 20 0 9 0.11 1 1 0 0 0 0
...................TTACTAATGACACTGATACTGCC..................................................................................................................................................... 23 2 9 0.11 1 0 1 0 0 0
.......................GAATGACACTGATACTGCCTTTACTCC............................................................................................................................................. 27 1 9 0.11 1 0 1 0 0 0
......................TGAATGACACTGATACTGCCTTTAC................................................................................................................................................ 25 1 9 0.11 1 0 1 0 0 0
...................TGATTAATGACACTGATACGGCCTTCC................................................................................................................................................. 27 3 9 0.11 1 0 1 0 0 0
......................TTAATGACACTGATACTGCCT.................................................................................................................................................... 21 0 9 0.11 1 0 1 0 0 0
.......................TAATGACACTGATACTGCCCC................................................................................................................................................... 21 2 9 0.11 1 0 1 0 0 0
...................TGCTTAATGACACTGATACTGCCTT................................................................................................................................................... 25 1 9 0.11 1 0 1 0 0 0
...................TGATTAATGACACTGATACTGCCTTTATT............................................................................................................................................... 29 1 9 0.11 1 1 0 0 0 0
...................TGATTAATGACACTGATACTGCCTTTAAT............................................................................................................................................... 29 1 9 0.11 1 1 0 0 0 0
....................GATTAATGACCCTGATACTGCCTT................................................................................................................................................... 24 1 9 0.11 1 0 1 0 0 0
......................TTAATGACACTGATACTGCC..................................................................................................................................................... 20 0 9 0.11 1 0 1 0 0 0
..................ATGATTAATGACACTGATACTGCCTT................................................................................................................................................... 26 0 9 0.11 1 1 0 0 0 0
....................GATTAATGACACTGATACTGCCTTCACA............................................................................................................................................... 28 2 9 0.11 1 1 0 0 0 0
...................TTAGTAATGACACTGATACTGCCTTT.................................................................................................................................................. 26 2 9 0.11 1 0 1 0 0 0
...................TTATTAATGACACTGATACTGCCTTTAC................................................................................................................................................ 28 1 9 0.11 1 0 1 0 0 0
.........................................................................................................................................................TTTAAAAGGACGTGACCGA................... 19 0 9 0.11 1 1 0 0 0 0
...................TGATTAATGACCCTGATACTGCCTTT.................................................................................................................................................. 26 1 9 0.11 1 1 0 0 0 0
...................TGATTAATGACACTGATACTTCCTTTAC................................................................................................................................................ 28 1 9 0.11 1 1 0 0 0 0
...................TGACTAATGACACTGATACTCCCTC................................................................................................................................................... 25 3 9 0.11 1 0 1 0 0 0
...................TTATTAATGACACCGATACTGC...................................................................................................................................................... 22 2 9 0.11 1 0 1 0 0 0
..................CTGATTAATGACACTGATACTGCCTTTA................................................................................................................................................. 28 1 9 0.11 1 1 0 0 0 0
...................TGATTAATGACACTGATACTGCCTTTACA............................................................................................................................................... 29 1 9 0.11 1 1 0 0 0 0
.......................TAATGACACTGATACTGCCT.................................................................................................................................................... 20 0 9 0.11 1 0 1 0 0 0

Anti-sense strand reads

TTCGGTTTTTGTGTACCATACTAATTACTGTGACTATGACGGAAATGAGGACTACGAAAAAACCACTGAAGCAGTTTTACAAAATTTTACAGCGTATTCAGACGCTACGTTAGTATAACCAGCAATAAGTTTCAACTACCACGAAAACTTGTTAAATTTTCCTGCACTGGCTATAGTAGGGACTGGTTATT
***********************************.((.(((..((....((((((..((((((((....))))))))...........((((((......)))))))).))))))..))).))..((((((((.......)).))))))......*********************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V056
head
 V041
embryo
........................................................................................................CTACGTTAGTATAACCAGCAAT................................................................. 22 0 4 2.50 10 4 6 0 0 0
..CGGTTTTTGTGTACCATACTAATTACT.................................................................................................................................................................. 27 0 9 2.11 19 16 3 0 0 0
.......................................................................................................GCTACGTTAGTATAACCAGCAAT................................................................. 23 0 4 1.75 7 7 0 0 0 0
..............................................................CCACTGAAGCAGTTTTACAAAATTTT....................................................................................................... 26 0 2 1.50 3 0 3 0 0 0
.................................................................................................TCAGACGCTACGTTAGTATAACCAGCAAT................................................................. 29 0 3 1.00 3 1 2 0 0 0
...................................................................................................................................TCAACTACCACGAAAACTTGTTAA.................................... 24 0 2 1.00 2 2 0 0 0 0
...................................................................................................AGACGCTACGTTAGTATAACCAGCAAT................................................................. 27 0 4 0.75 3 3 0 0 0 0
.......................................CGGAAATGAGGACTACGAAAA................................................................................................................................... 21 0 7 0.71 5 2 0 2 0 1
..................................................................................................CAGACGCTACGTTAGTATAACCAGCAAT................................................................. 28 0 3 0.67 2 2 0 0 0 0
..................................................................................................................................................................TGCACTGGCTATAGTAGGGACTGG..... 24 0 2 0.50 1 1 0 0 0 0
....................................................GACGAACAAACCAATGAAGCAG..................................................................................................................... 22 3 2 0.50 1 0 0 0 1 0
....................................................................................................................................CAACTACCACGAAAACTTGTT...................................... 21 0 2 0.50 1 0 1 0 0 0
.......................................................................................................................CAGCAATAAGTTTCAACTACCACGAA.............................................. 26 0 2 0.50 1 1 0 0 0 0
....................................................................................................GACGCTACGTTAGTATAACCAGCAAT................................................................. 26 0 4 0.50 2 2 0 0 0 0
..................................................................................................................................TTCAACTACCACGAAAACTTGTTAA.................................... 25 0 2 0.50 1 1 0 0 0 0
......................................ACGGAAATGAGGACTACGAAAAAACCA.............................................................................................................................. 27 0 2 0.50 1 1 0 0 0 0
...................................................................................................................................TCAACTACCACGAAAACTTGT....................................... 21 0 2 0.50 1 0 1 0 0 0
......................................................................................................................................ACTACCACGAAAACTTGTTAA.................................... 21 0 2 0.50 1 1 0 0 0 0
..............................................................CCACTGAAGCAGTTTTACAAAATTT........................................................................................................ 25 0 2 0.50 1 1 0 0 0 0
......................................................................................................CGCTACGTTAGTATAACCAGCAAT................................................................. 24 0 4 0.50 2 2 0 0 0 0
......................................ACGGAAATGAGGACTACGAAAAAACC............................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0
.......................................................................................................................CAGCAATAAGTTTCAACTACCACG................................................ 24 0 2 0.50 1 0 1 0 0 0
....................................................................................................................AACCAGCAATAAGTTTCAACTACCACGA............................................... 28 0 2 0.50 1 1 0 0 0 0
.....................................GACGGAAATGAGGACTACGAAAA................................................................................................................................... 23 0 7 0.43 3 2 0 1 0 0
.................................................................................................TCAGACGCTACGTTAGTATAACCAGCAA.................................................................. 28 0 3 0.33 1 1 0 0 0 0
..........................................................................................AGCGTATTCAGACGCTACGTTAGTAT........................................................................... 26 0 3 0.33 1 0 1 0 0 0
......TTTTGTGTACCATACTAATTACT.................................................................................................................................................................. 23 0 9 0.33 3 2 0 1 0 0
...GGTTTTTGTGTACCATACTAATTACT.................................................................................................................................................................. 26 0 9 0.33 3 3 0 0 0 0
.......................................................................................TACAGCGTATTCAGACGCTACGTTAGTAT........................................................................... 29 0 3 0.33 1 0 1 0 0 0
........................................................................................................CTACGTTAGTATAACCAGCAGT................................................................. 22 1 4 0.25 1 0 1 0 0 0
.....................................................................................................ACGCTACGTTAGTGTAACCAGCAAT................................................................. 25 1 4 0.25 1 1 0 0 0 0
.......................................................................................................GCTACGTTAGTATAACCAGCAA.................................................................. 22 0 4 0.25 1 1 0 0 0 0
....................................................................................................AACGCTACGTTAGTATAACCAGCAAT................................................................. 26 1 4 0.25 1 1 0 0 0 0
....................................................................................................TACGCTACGTTAGTATAAACAGCAAT................................................................. 26 2 4 0.25 1 0 1 0 0 0
..................................................................TGAAGCAGTTTTACAAAATTTTACAGC.................................................................................................. 27 0 6 0.17 1 1 0 0 0 0
..................................TATGACGGAAATGAGGACTACGA...................................................................................................................................... 23 0 7 0.14 1 1 0 0 0 0
.................................CTATGACTGAAATGAGGACTACGAAA.................................................................................................................................... 26 1 7 0.14 1 0 1 0 0 0
....................................TGACGGAAATGAGGACTACGAAAA................................................................................................................................... 24 0 7 0.14 1 1 0 0 0 0
....................................TGACGGAAATGAGGACTACGA...................................................................................................................................... 21 0 7 0.14 1 1 0 0 0 0
...............................GACTATGACGGAAATGGGGACTACGAAA.................................................................................................................................... 28 1 7 0.14 1 1 0 0 0 0
.....................................AACGGAAATGAGGACTACGAAAAA.................................................................................................................................. 24 1 7 0.14 1 1 0 0 0 0
...............................GACTATGACGGAAATGAGGACTACGA...................................................................................................................................... 26 0 7 0.14 1 0 0 1 0 0
...................................ATGACGGAAATGAGGACTACGAAAA................................................................................................................................... 25 0 7 0.14 1 1 0 0 0 0
...................................TTGACGGAAATGAGGACTACGA...................................................................................................................................... 22 1 7 0.14 1 1 0 0 0 0
.................................CTATGACGGAAATGAGGACTACGAAAA................................................................................................................................... 27 0 7 0.14 1 0 1 0 0 0
ATCGGTTTTTGTGTACCATACTAATTACT.................................................................................................................................................................. 29 1 9 0.11 1 1 0 0 0 0
...GGTTTTTGTGTACCATAC.......................................................................................................................................................................... 18 0 9 0.11 1 1 0 0 0 0
........TTGTGTACCATACTAATTACTGT................................................................................................................................................................ 23 0 9 0.11 1 1 0 0 0 0
..............................TGACTATGACGGAAATGAGGAC........................................................................................................................................... 22 0 9 0.11 1 1 0 0 0 0
.........TGTGTACCATACTAATTACTGT................................................................................................................................................................ 22 0 9 0.11 1 0 0 0 0 1
.....TTTTTGTGTACCATACTAATTACT.................................................................................................................................................................. 24 0 9 0.11 1 1 0 0 0 0
............................................TTGAGGACTACGAAAATA................................................................................................................................. 18 2 11 0.09 1 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6541:2424349-2424539 + dmo_97 AAG-CC------AAAAACACATGGTATGATTAATGACACTGATACTGCCTTTACTCCTGATGCTTTTTTGGTGACTTCGTCAAAATGTTTTAAAATGTCGCATAAGTCTGCGATGCAATCATATTGGTCGTTATTCAAAGTTGATGGTGCTTTTGAACAATTTAAAAGGACGTGACCGATATCATCCCTGACCAA----TAA
droVir3 scaffold_12963:16864689-16864772 + AAA-AG--------------------------------------------------------------------------------GTGTTA-AAATTAGCATATTCTTTTTATTTATATGTATTGTTTGTTATGTAAAATCGGTTATTATTTTGAATGATATA------------------------------------AA
droGri2 scaffold_15126:4590164-4590232 - TGG-TG-----------------------------CTGCTGCTGCTGCTGCTGCTGCTGCTGATTGTGTGTTGGCATTGCCAAAATGTGTAGAAATCTC-------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000013143:301-491 + AAG-CC------ATAAACATTTGGTATAATTAGGGATACTGACACCGCCTTCACAGCTGAAGCCTGCTTTGTCACGTCGTCGAACGGCTTTAAGATTTCACATAAATCTGTTATGCAATCATATTGTTCGTTTCTTAAAGGTGATGGCGCTTTTGAACAATTAAGAAGGACGCGACCAATAGCATCTCTTACAAG----TAA
dp5 XL_group1a:8380545-8380567 + CCG-AT------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAACCCTGACCGA----TAC
droPer2 scaffold_408:5903-5977 - T---------------------------------------------------------------------------------------------------------------------------TCGTCAGCAGTCAGAGGGTCTGGGGCTCTTGAGATGCTGAGGAGAACAGGCGATACATTGTTTTTTGTGTC----TAA
droAna3 scaffold_12984:753521-753711 - AAT-CC------ACAAACAATTGGAACTATCAGCGATGCTGTAACTGAAGTACTGGAAGATACCTGTTTTGTAGCGTTATCAAACGGAGATAGTAACTGAACAATATCTTTTAATATTGCGACTTCGTCCGCAGTGAATGGTGTTGGTGCTTTAGACGTACTTAAAAGTACTTTCGAGATGGCCTCATTTGTAAG----TAG
droBip1 scf7180000395847:957-1147 - AGG-CC------AAGTGTCGTGGGTATAATTAGGTTTACTGTGGTGGATTTAGCAGACGAAGTGTTTGATGTAGCTGCTTCAAAATGGTCCAATACGCTGCATATCTCCTTCATGGAATCAAATTGATCCTCGTTTAAGGGCAATGGTGCCTTTGAAGTATTTAAAAGGACTGTTGAAAGGTGTTCCCTTATACA----GAG
droKik1 scf7180000300050:4181-4378 - AATCATAAGGCCGAGTGTCGTGGGTATAATTAAGTTTACTGTGGTGGATTTAGCAGACGAAGTGTTTAATGTAGTCGCTTCAAAATGGTCCAATACGCTGCATATCTCCTTCATGGAATCAAATTGATCCTCGTTTAAGGGCAATGGTGCCTTTGATGTATTTAAAAGGACTGTGCAAATGTGTTCCCTTACAAG----GAG
droFic1 scf7180000453347:4425-4621 - TGC-ACAAGACCATTCGATTTGGGAATTATGCATGATACGGTTACTTTAGTACTCGAAGATAATTGAGTGGTAACTTCATCGAATGGAGCCAGCACGTCTTTTAAATCTTCCAAGACCGCAACATCGTCTGCAGCCAGGGGCTCCGGCGCCTTGGACAAACTTAGAATTACAGGCAGGATATGCTCCTTGGTCAA----TAG
droEle1 scf7180000491000:439292-439483 + AAG-CC-----CATATGCCATGGGTATAATCAGAGATATGGTTACATATTTTCCACCAGAAACTTTTTCACTTGCTTGCTGGAAGAAAGACAATATTTTTTCCATATCTTTTAACACAAGTATTTCGTCAGCCGTAAATGGCTGAGGTGCATTTGTGGTTCCTAATAGGACTTTGGCAATGGCATCATTTGTTTT----TAA
droRho1 scf7180000762686:18509-18696 - TGG-ACAACTCCATTGGAAATGGGAATTACGCTGGACACAGTCACTTTTGTGCTCGAAGACAATAGTTTCGTAACTTCATCAAATGGAGCTAGAACGTCTTGCAAATCCTCTAGTAAAGAAACGTCGTCTGCTG---------CCGGCGCCTTGGACCAGGTAAGCAGTACGGGAGAAATAAACTCTTTGGTCAA----GAG
droBia1 scf7180000301491:20011-20198 - ACG-CC------A-------CCGGTATTCTTAAAGAAATTGTCACCTTTGTATCGCCAGAGAAATAATGCGTAGCATCATCAAAAATTTTTAAAAACTCGCAAATGTCAGTCAGGAGGTTTATTTCATCTGTATTTAAAATTTGCTCCGACTTCGGAGTATTTAACAGAACTGAGCTGATTTCATTTTTCAGTTGCAAAAAA
droTak1 scf7180000414129:64636-64825 + AGG-CG------AAGTACTGTGGGTATTATTAGGGATATGGTTACCGTTTTCGCAGCCGACGTATTCACTGTTGCCGTTTTAAAGGGATCTAAAAGTGTGCAAATATCTTCAAT-AAAGAAAATTGCTCCTCACTTAAGGGAACTGGAGCTTTTAATGTTTTTAGCAAAACTCCGCAAACTGCCTCTCGAACGAG----TAA
droEug1 scf7180000407213:11307-11488 + ACG-CC------A-------CCGGTATCATTAAAGAAATTGTCACCTTTGCATCGCCAGAGA--CAATGCGTAGCATCGTTAAAAATTTTTAAAAGCTCGCAAATGTCAGTCAGCAGGTTTATGTCATTTGCATTTAACATCTGCTCCGACTTCGGAGTATTTAACAAAACTGAGTTGATTTTATTTTTCAGTTG----CAA
dm3 chr2R:2381010-2381044 - AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCACGGCAGAAATGGAGTCATTTACTAA----AAT
droSim2 node_7313:17913-18103 + AAA-TC------ATAAATAAGAGGTATTATTACGGAAATCGAAAGAGTTTTGTTTGTCGATATCTGCACTGTGGCTTCGTGAAACGGAGCTAGAACTTGACATATCTCAACCAGAACGATCATTTCGTCCGCTGATAATGGTCTTGGAGCTTTGGTTGAGTTAAGAAGCACTGCAGAAAGCGAGTCATTTACTAA----AAT
droSec2 scaffold_473:7928-8115 + TC----------ATAAATAAGAGGTATTATTACGGAAATCGAAAGAGTTTTGTTTGTCGATATCTGCACTGTGGCTTCGTGAAACTGAGCTAGAACTTGACATATCTCAACCAGAACGAACATTTCGTCCGCTGATAATGGTCTTGGATCTTTGGTTGAGTTTAGAAGCAATGCAGAAAGCGAGTCATTTACTAA----AAT
droYak3 chr2h:25098-25285 - AAG-CC------ATATACTGTAGGAATGATGAACGATATTGTTACAT---TGTTGGACGATATTTGACGTGTGGCCTTATCAAATGATTGCAGCAATAAAATCAACTCTTTAATGAAAGATAGCTGGTCAACATTTAATGGAGCTGGCGCCTTAGAAGTGCTAAGCAGTTCTTTTTTAATGGCCTCGTTAATCAT----TAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
AAG-CC------AAAAACACATGGTATGATTAATGACACTGATACTGCCTTTACTCCTGATGCTTTTTTGGTGACTTCGTCAAAATGTTTTAAAATGTCGCATAAGTCTGCGATGCAATCATATTGGTCGTTATTCAAAGTTGATGGTGCTTTTGAACAATTTAAAAGGACGTGACCGATATCATCCCTGACCAA----TAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................................................TTGGTCGTTATTCAAAGTTGATGGTGC....................................................272145.502911880001030
...........................................................................................................................TTGGTCGTTATTCAAAGTTGATGGT......................................................25267.501355825102130
...........................................................................................................................TTGGTCGTTATTCAAAGTTGATGG.......................................................24256.00112563200420
...........................................................................................................................TTGGTCGTTATTCAAAGTTGATGGTG.....................................................26236.50736900040
..........................TGATTAATGACACTGATACTGCCTT.......................................................................................................................................................25919.00171145100250
........................................................................................................................................................TTGAACAATTTAAAAGGACGTGACCGA.......................27213.00262500010
...........................................................................................................................TTGGTCGTTATTCAAAGTTGATGGTGCT...................................................28210.50211200090
.......................................................................................................................................................TTTGAACAATTTAAAAGGACGTGACCGA.......................2829.00181600020
.........................................................TGATGCTTTTTTGGTGACTTCGTCAAA......................................................................................................................2729.00181240020
..........................TGATTAATGACACTGATACTGCCTTTAC....................................................................................................................................................2898.11736600070
...........................................................................................................................TTGGTCGTTATTCAAAGTTGATGGTGCTT..................................................2927.0014500090
..........................TGATTAATGACACTGATACTGCCTTT......................................................................................................................................................2696.89625800040
......................................................TCCTGATGCTTTTTTGGTGACTTCG...........................................................................................................................2526.00121200000
..........................TGATTAATGACACTGATACTGCCTTTA.....................................................................................................................................................2795.22474200050
..........................TGATTAATGACACTGATACTGCCT........................................................................................................................................................2494.784325000180
.........................................................TGATGCTTTTTTGGTGACTTCGTCA........................................................................................................................2524.008710000
........................................................................................................................................................TTGAACAATTTAAAAGGACGTGACC.........................2524.008300050
............................................................................................................................TGGTCGTTATTCAAAGTTGATGGTGC....................................................2623.507600010
.........................................................TGATGCTTTTTTGGTGACTTCGTCAAAA.....................................................................................................................2823.507600001
...........................................................................................................................TTGGTCGTTATTCAAAGTTGATG........................................................2323.006600000
............................................................................................................................TGGTCGTTATTCAAAGTTGATGG.......................................................2323.006600000
........................................................................................................................................................TTGAACAATTTAAAAGGACGTGACCGATA.....................2922.505400010
...........................................................................................................................TTGGTCGTTATTCAAAGTTGATGGTGCC...................................................2822.505000050
......................................................TCCTGATGCTTTTTTGGTGACTTC............................................................................................................................2422.505300020
............................................................TGCTTTTTTGGTGACTTCGTCAAAATG...................................................................................................................2722.004400000
.........................................................TGATGCTTTTTTGGTGACTTCGTC.........................................................................................................................2422.004300010
.......................................................................................................................................................TTTGAACAATTTAAAAGGACGTGACC.........................2622.004100030
.................................................................................................................TGCAATCATATTGGTCGTTATTCAAAG..............................................................2742.008700010
..............................TAATGACACTGATACTGCCTTTACTCC.................................................................................................................................................2791.7816700090
..........................TGATTAATGACACTGATACTGCC.........................................................................................................................................................2391.5614700070
........................................................................................................................................................TTGAACAATTTAAAAGGACGTGACCG........................2621.503300000
......................................................................................................................................................TTTTGAACAATTTAAAAGGACGTGA...........................2521.503200010
....................................................................................................................................ATTCAAAGTTGATGGTGC....................................................1821.503300000
......................................................................................................................................................TTTTGAACAATTTAAAAGGACGTGACCGA.......................2921.503200010
...........................GATTAATGACACTGATACTGCCTT.......................................................................................................................................................2491.22111100000
.....................................................................................TGTTTTAAAATGTCGCATAAGTCTGC...........................................................................................2651.206500010
.......................................................................................................................................................TTTGAACAATTTAAAAGGACGTGACCG........................2721.002200000
.................................................................................................................................................................TTAAAAGGACGTGACCGATATCATCCC..............2721.002100010
............................................................................................................................TGGTCGTTATTCAAAGTTGATGGTGCT...................................................2721.002200000
............................................................................................................................TGGTCGTTATTCAAAGTTGATGGT......................................................2421.002100010
.........................................................................................................................................................TGAACAATTTAAAAGGACGTGACCG........................2521.002200000
.....................................................................................TGTTTTAAAATGTCGCATAAGTCT.............................................................................................2451.005200030
...................................................TACTCCTGATGCTTTTTTGGTGACTTC............................................................................................................................2721.002200000
..........................................................GATGCTTTTTTGGTGACTTCGTCAAA......................................................................................................................2621.002200000
........................................................................................................................................................TTGAACAATTTAAAAGGACGTGACCGAT......................2821.002200000
......................................................................................................................................................TTTTGAACAATTTAAAAGGACGTGAC..........................2621.002100010
.........................................................................................................................................................TGAACAATTTAAAAGGACGTGACCGA.......................2621.002200000
......................................................TCCTGATGCTTTTTTGGTGACTTCGTC.........................................................................................................................2721.002200000
.......................................................................................................................................................TTTGAACAATTTAAAAGGACGTGA...........................2421.002200000
...........................................................................................................................TTGGTCGTTATTCAAAGTTGATGGG......................................................2521.002100010
.................................................................................................................TGCAATCATATTGGTCGTTATTCAAAGT.............................................................2821.002100010
............................................................................................................................TGGTCGTTATTCAAAGTTGATGGTG.....................................................2521.002200000
............................................................TGCTTTTTTGGTGACTTCGTCAAAA.....................................................................................................................2521.002200000
...........................................................................................................................TTGGTCGTTATTCAAAGTTGATGGTC.....................................................2621.002100001
......................................................................................................................................................TTTTGAACAATTTAAAAGGACGTG............................2421.002200000
...........................................................................................................................TTGGTCGTTATTCAAAGTTGATGGC......................................................2521.002000020
..........................TGATTAATGACACTGATACTGCCTTTACT...................................................................................................................................................2990.787700000
......................................................................................................TAAGTCTGCGATGCAATCATATTGG...........................................................................2530.672200000
..........................TGATTAATGACACTGATACTGCCC........................................................................................................................................................2490.565000050
..........................................................................................................................................................GAACAATTTAAAAGGACGTGACCGA.......................2520.501100000
...........................................................................................................................................................AACAATTTAAAAGGACGTGACCGA.......................2420.501100000
...........................................................................................................................TTGGTCGTTATTCAAAGTTGAT.........................................................2220.501100000
.............................................................................................................................GGTCGTTATTCAAAGTTGATGGTG.....................................................2420.501100000
......................................................TCCTGATGCTTTTTTGGTGACTTCGT..........................................................................................................................2620.501100000
.........................................................................................................................TATTGGTCGTTATTCAAAGTTGATGG.......................................................2620.501000001
..........................................................GATGCTTTTTTGGTGACTTCGTCAAAA.....................................................................................................................2720.501100000
.................................................................................................................................................................TTAAAAGGACGTGACCGATATCATCCCC.............2820.501000010
.................................................TTTACTCCTGATGCTTTTTTGGTGACTTC............................................................................................................................2920.501100000
......................................................................................................................................................TTTTGAACAATTTAAAAGGACGTGACCG........................2820.501000010
...................................................................................................................................TATTCAAAGTTGATGGTGC....................................................1920.501100000
.......................................................................................................................................................TTTGAACAATTTAAAAGGACGTGACCGT.......................2820.501100000
................................................................................................................................................................TTTAAAAGGACGTGACCGATATCATC................2620.501000010
........................................................................................................................ATATTGGTCGTTATTCAAAGTTGA..........................................................2420.501100000
.........................................................................................................................TATTGGTCGTTATTCAAAGTTGATGGT......................................................2720.501000010
...........................................................................................................................TTGGTCGTTATTCAAAGTTGATGGTGCTC..................................................2920.501000010
.........................................................TGATGCTTTTTTGGTGACTTCGTTG........................................................................................................................2520.501010000
......................................................TCCTGATGCTTTTTTGGTGACTT.............................................................................................................................2320.501100000
.........................................................TGATGCTTTTTTGGTGACTTCGTCAAT......................................................................................................................2720.501100000
...............................................................................................................................TCGTTATTCAAAGTTGATGGTG.....................................................2220.501100000
.............................................................................................................................GGTCGTTATTCAAAGTTGATGGTGC....................................................2520.501100000
............................................................................................................................................................ACAATTTAAAAGGACGTGACC.........................2120.501000010
............................................................................................................................TGGTCGTTATTCAAAGTTGATGGTGCTT..................................................2820.501100000
................................................................................................................................................................TTTAAAAGGACGTGACCGATATCAT.................2520.501100000
...........................................................................................................................TTGGTCGTTATTCAAAGTTGA..........................................................2120.501000010
...........................................................................................................................TTGGTCGTTATTCAAAGTTG...........................................................2020.501100000
......................................................................................................................................................TTTTGAACAATTTAAAAGGACGTGACC.........................2720.501000010
.................................................................................................................................GTTATTCAAAGTTGATGGTGC....................................................2120.501100000
..................................................................................................................................TTATTCAAAGTTGATGGTGCTTTTG...............................................2520.501100000
...................................................................TTGGTGACTTCGTCAAAATGTTT................................................................................................................2320.501100000
..............................................................................................................................................................AATTTAAAAGGACGTGACCG........................2020.501100000
......................................................................................................................TCATATTGGTCGTTATTCAAAGTTG...........................................................2520.501100000
.....................................................................................................................................TTCAAAGTTGATGGTGCTTTTGAACA...........................................2620.501100000
...................................................................TTGGTGACTTCGTCAAAATGTT.................................................................................................................2220.501100000
.....................................................CTCCTGATGCTTTTTTGGTGAC...............................................................................................................................2220.501100000
.................................................................................................................................................................TTAAAAGGACGTGACCGATATCATCCCTG............2920.501100000
.......................................................................................................................................................TTTGAACAATTTAAAAGGACGTGACCGAT......................2920.501100000
...............................................................................................................................................ATGGTGCTTTTGAACAATTTAAAAGG.................................2620.501100000
............................................................................................................................................TTGATGGTGCTTTTGAACAATTTAAAAG..................................2820.501100000
................................................................................................................................................TGGTGCTTTTGAACAATTTAAAAGGAC...............................2720.501100000
...................................................................................................................................................................AAAAGGACGTGACCGATATCATCCC..............2520.501100000
....................................................................................................................................ATTCAAAGTTGATGGTGCT...................................................1920.501100000
.......................................................................................................................................................TTTGAACAATTTAAAAGGACGTGACCGAA......................2920.501100000
..........................................................GATGCTTTTTTGGTGACTTCGTCAA.......................................................................................................................2520.501100000
.........................................................TGATGCTTTTTTGGTGACTTCGTCAAAAT....................................................................................................................2920.501100000
...................................................................TTGGTGACTTCGTCAAAATGTTTTAAA............................................................................................................2720.501000001
.........................................................................................................................TATTGGTCGTTATTCAAAGTTGAT.........................................................2420.501100000
.......................................................................................................................................................TTTGAACAATTTAAAAGGACGTG............................2320.501100000
.................................................TTTACTCCTGATGCTTTTTTGGTGACTC.............................................................................................................................2820.501100000
.........................................................TGATGCTTTTTTGGTGACTTCGTCAAAAA....................................................................................................................2920.501100000
...........................................................................................................................TTGGTCGTTATTCAAAGTT............................................................1920.501100000
.........................................................................................................................................................TGAACAATTTAAAAGGACGTGACCGAT......................2720.501100000
...........................GATTAATGACACTGATACTGCCTTTAC....................................................................................................................................................2790.444400000
........................TATGATTAATGACACTGATACTGCC.........................................................................................................................................................2590.444100030
....................................CACTGATACTGCCTTTACTCCTGATGC...........................................................................................................................................2770.433200010
.......................................................................................TTTTAAAATGTCGCATAAGTCT.............................................................................................2250.402200000
.....................................................................................................ATAAGTCTGCGATGCAATCATATTG............................................................................2530.331100000
...........................GATTAATGACACTGATACTGCCT........................................................................................................................................................2390.333300000
..............................TAATGACACTGATACTGCCTTTACT...................................................................................................................................................2590.333000030
...........................................................................................................................TTGGTCGTTATTCAAAGTTGATGGTTT....................................................2730.331100000
.............................TTAATGACACTGATACTGCCTTTAC....................................................................................................................................................2590.333300000
......................................................................................................TAAGTCTGCGATGCAATCATA...............................................................................2130.331100000
..............................TAATGACACTGATACTGCCTTTACTC..................................................................................................................................................2690.333200010
..........................TGATTAATGACACTGATAC.............................................................................................................................................................1990.333110010
.................................TGACACTGATACTGCCTTTACTCCTGA..............................................................................................................................................2770.292200000
..................................................................................................................GCAATCATATTGGTCGTTATTCAA................................................................2440.251100000
..................................................................................................................GCAATCATATTGGTCGTTATTCAAAG..............................................................2640.251100000
.................................................................................................................TGCAATCATATTGGTCGTTATTCA.................................................................2440.251100000
..........................TGATTAATGACACTGATACTGCCTTC......................................................................................................................................................2690.222200000
..........................TGATTAATGACACTGATACTG...........................................................................................................................................................2190.222200000
.................................TGACACTGATACTGCCTTTACTCC.................................................................................................................................................2490.222100010
.......................GTATGATTAATGACACTGATACTGCC.........................................................................................................................................................2690.222000020
.................................TGACACTGATACTGCCTTTACTCCTG...............................................................................................................................................2690.222200000
........................TATGATTAATGACACTGATACTGCCTT.......................................................................................................................................................2790.222200000
................................ATGACACTGATACTGCCTTTAC....................................................................................................................................................2290.222200000
.............................TTAATGACACTGATACTGCCTTTACTCC.................................................................................................................................................2890.222200000
..........................TGATTAATGACACTGATACTGCCTC.......................................................................................................................................................2590.222000020
...........................GATTAATGACACTGATACTGCCTTT......................................................................................................................................................2590.222200000
..........................TGATTAATGACACTGATACTGC..........................................................................................................................................................2290.222200000
.......................................................................................TTTTAAAATGTCGCATAAGTCTGC...........................................................................................2450.201100000
.....................................................................................TGTTTTAAAATGTCGCATAAGTCTGCC..........................................................................................2750.201100000
........................................................................................TTTAAAATGTCGCATAAGTCTGCGATG.......................................................................................2750.201000010
...........................................................................TTCGTCAAAATGTTTTAAAATGTCGCA....................................................................................................2760.171100000
............................................................................TCGTCAAAATGTTTTAAAATGTCGCA....................................................................................................2660.171100000
.............................................................................CGTCAAAATGTTTTAAAATGTCGCA....................................................................................................2560.171100000
.......................................TGATACTGCCTTTACTCCTGATGCTT.........................................................................................................................................2670.141100000
......................................CTGATACTGCCTTTACTCCTGATGCT..........................................................................................................................................2670.141100000
.........................................ATACTGCCTTTACTCCTGATGC...........................................................................................................................................2270.141000010
......................................CTGATACTGCCTTTACTCCTGATGC...........................................................................................................................................2570.141000010
....................................CACTGATACTGCCTTTACTCCTGA..............................................................................................................................................2470.141000010
.....................................ACTGATACTGCCTTTACTCCTGATGC...........................................................................................................................................2670.141100000
.....C------AAAAACACATGGTATGATTAATG.......................................................................................................................................................................2490.111100000
.....................TGGTATGATTAATGACACTGATACTGCC.........................................................................................................................................................2890.111100000
..........................TGATTAATGACACTGATACTGCCTTTACC...................................................................................................................................................2990.111100000
..............................TAATGACACTGATACTGCCTTTACC...................................................................................................................................................2590.111000010
..............................TAATGACACTGATACTGCCTT.......................................................................................................................................................2190.111100000
.................................................................................................................................................................TTAAAAGGACGTGACCGA.......................1890.111100000
..............................TAATGACACTGATACTGCCTTTAC....................................................................................................................................................2490.111100000
.............................TTAATGACACTGATACTGCCTTTACTC..................................................................................................................................................2790.111000010
...........................GATTAATGACACTGATACTGCCTTTA.....................................................................................................................................................2690.111100000
......................GGTATGATTAATGACACTGATACTGCC.........................................................................................................................................................2790.111100000
.....................TGGTATGATTAATGACACTGATACTGC..........................................................................................................................................................2790.111000010
...............AACACATGGTATGATTAATGACACTGA................................................................................................................................................................2790.111000010
..........................TGATTAATGACACTGATACT............................................................................................................................................................2090.111100000
..................................GACACTGATACTGCCTTTAC....................................................................................................................................................2090.111100000
...........................GATTAATGACACTGATACTGC..........................................................................................................................................................2190.111100000
...............................................................................................................................................................ATTTAAAAGGACGTGACCGA.......................2090.111100000
.............................TTAATGACACTGATACTGCCT........................................................................................................................................................2190.111000010
..............................TAATGACACTGATACTGCCCC.......................................................................................................................................................2190.111000010
.............................TTAATGACACTGATACTGCC.........................................................................................................................................................2090.111000010
.........................ATGATTAATGACACTGATACTGCCTT.......................................................................................................................................................2690.111100000
................................................................................................................................................................TTTAAAAGGACGTGACCGA.......................1990.111100000
..........................TGATTAATGACACTGATACTGCCTTTACA...................................................................................................................................................2990.111100000
..............................TAATGACACTGATACTGCCT........................................................................................................................................................2090.111000010
droVir3
AAA-AG--------------------------------------------------------------------------------GTGTTA-AAATTAGCATATTCTTTTTATTTATATGTATTGTTTGTTATGTAAAATCGGTTATTATTTTGAATGATATA------------------------------------AASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droGri2
TGG-TG-----------------------------CTGCTGCTGCTGCTGCTGCTGCTGCTGATTGTGTGTTGGCATTGCCAAAATGTGTAGAAATCTC-------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
AAG-CC------ATAAACATTTGGTATAATTAGGGATACTGACACCGCCTTCACAGCTGAAGCCTGCTTTGTCACGTCGTCGAACGGCTTTAAGATTTCACATAAATCTGTTATGCAATCATATTGTTCGTTTCTTAAAGGTGATGGCGCTTTTGAACAATTAAGAAGGACGCGACCAATAGCATCTCTTACAAG----TAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................TATTGTTCGTTTCTTAAAGGTGATGG.......................................................2636.3319000190
............................................................................................................................TGTTCGTTTCTTAAAGGTGATGGCGC....................................................2635.3316000160
.............TAAACATTTGGTATAATTAGGGATAC...................................................................................................................................................................2645.0020020180
........................TATAATTAGGGATACTGACACCGCCT........................................................................................................................................................2644.5018160110
....................................................................TTGTCACGTCGTCGAACGGCTTTAAGA...........................................................................................................2733.3310000100
..............................TAGGGATACTGACACCGCCTTCACAGC.................................................................................................................................................2743.001205070
..........................TAATTAGGGATACTGACACCGCCT........................................................................................................................................................2443.001207140
............................................................................................................................TGTTCGTTTCTTAAAGGTGATGGC......................................................2432.33700070
..........................TAATTAGGGATACTGACACCGCCTT.......................................................................................................................................................2541.50605010
............................................................................................................................TGTTCGTTTCTTAAAGGTGATGG.......................................................2331.33401030
......................................................................................................TAAATCTGTTATGCAATCATATTGT...........................................................................2531.33402020
.........................................................................................................................................................TGAACAATTAAGAAGGACGCGACCA........................2531.33401030
............................................................................................................................TGTTCGTTTCTTAAAGGTGATGGCG.....................................................2531.33400040
..................................................TCACAGCTGAAGCCTGCTTTGTCACG..............................................................................................................................2641.25504010
.................................................TTCACAGCTGAAGCCTGCTTTGTCACG..............................................................................................................................2741.25502030
..............................TAGGGATACTGACACCGCCTTCACAG..................................................................................................................................................2641.00404000
........................TATAATTAGGGATACTGACACCGCCTT.......................................................................................................................................................2740.75301110
.............................................CGCCTTCACAGCTGAAGCCTGCTT.....................................................................................................................................2440.75301020
.........................................................TGAAGCCTGCTTTGTCACGTCGTCG........................................................................................................................2530.67201010
...............................................................................TCGAACGGCTTTAAGATTTCACATAAATC..............................................................................................2930.67202000
.........................................................TGAAGCCTGCTTTGTCACGTCGTCGAA......................................................................................................................2730.67200020
......................................................................................................................TCATATTGTTCGTTTCTTAAAGGTGA..........................................................2630.67200020
.....................................................................TGTCACGTCGTCGAACGGCTTTAAGA...........................................................................................................2630.67200020
.................................................TTCACAGCTGAAGCCTGCTTTGTCA................................................................................................................................2540.50200020
...............................AGGGATACTGACACCGCCTTCACAG..................................................................................................................................................2540.50202000
....................................TACTGACACCGCCTTCACAGCTGAAGC...........................................................................................................................................2740.50202000
.....................TGGTATAATTAGGGATACTGACACC............................................................................................................................................................2540.50200020
..................................................TCACAGCTGAAGCCTGCTTTGTCACGT.............................................................................................................................2740.50201010
..........................................CACCGCCTTCACAGCTGAAGCCTGCT......................................................................................................................................2640.50202000
....................................TACTGACACCGCCTTCACAGCTGAAGCC..........................................................................................................................................2840.50202000
..........................................CACCGCCTTCACAGCTGAAGCCTGCTT.....................................................................................................................................2740.50200020
.............TAAACATTTGGTATAATTAGGGATA....................................................................................................................................................................2540.50200020
..............................TAGGGATACTGACACCGCCTTCACA...................................................................................................................................................2540.50201010
..................................................TCACAGCTGAAGCCTGCTTTGTCAC...............................................................................................................................2540.50202000
...............................................................................................................................TCGTTTCTTAAAGGTGATGGCGCTTT.................................................2630.33101000
......................................................AGCTGAAGCCTGCTTTGTCACGTCGT..........................................................................................................................2630.33101000
....................................................................TTGTCACGTCGTCGAACGGCTTTAAGAT..........................................................................................................2830.33101000
.......................................................GCTGAAGCCTGCTTTGTCACGTCG...........................................................................................................................2430.33100010
.........................................................TGAAGCCTGCTTTGTCACGTCGTCGAACG....................................................................................................................2930.33101000
..........................................................................................................TCTGTTATGCAATCATATTGTTCGTT......................................................................2630.33101000
...............................................................................................................TATGCAATCATATTGTTCGTTTCT...................................................................2430.33101000
...............................................................................................................................TCGTTTCTTAAAGGTGATGGCGCTT..................................................2530.33100010
.......................................................................................................................CATATTGTTCGTTTCTTAAAGGTGA..........................................................2530.33101000
.......................................................................................................................................................TTTGAACAATTAAGAAGGACGCGACCA........................2730.33101000
................................................................................................TTCACATAAATCTGTTATGCAATCATAT..............................................................................2830.33101000
............................................................................................................................................GTGATGGCGCTTTTGAAC............................................1830.33101000
..............................................................................................................................TTCGTTTCTTAAAGGTGATGGCGC....................................................2430.33100010
.................................................................................................TCACATAAATCTGTTATGCAATCATAT..............................................................................2730.33100010
....................................................................TTGTCACGTCGTCGAACGGC..................................................................................................................2030.33100010
.................................................................................................................TGCAATCATATTGTTCGTTTCTTAAAG..............................................................2730.33100010
...........................................................................................................................TTGTTCGTTTCTTAAAGGTGATGGCGC....................................................2730.33100010
.................................................................................................................TGCAATCATATTGTTCGTTTCTTAAAGG.............................................................2830.33101000
......................................................................................................TAAATCTGTTATGCAATCATATTG............................................................................2430.33101000
..............................................................CCTGCTTTGTCACGTCGTCGAACGG...................................................................................................................2530.33101000
.................................................................................................................................................GGCGCTTTTGAACAATTAAGAAGGACG..............................2730.33100010
.....................................................................TGTCACGTCGTCGAACGGCTTTAAGATT.........................................................................................................2830.33101000
...................................................CACAGCTGAAGCCTGCTTTGTCACGTCG...........................................................................................................................2830.33100010
................................................................................CGAACGGCTTTAAGATTTCACATAAATC..............................................................................................2830.33100010
..........................................................................................TAAGATTTCACATAAATCTGTTATGCA.....................................................................................2730.33101000
.........................................................TGAAGCCTGCTTTGTCACGTCGTCGA.......................................................................................................................2630.33100010
........................................................................................................................................................TTGAACAATTAAGAAGGACGCGACCAA.......................2730.33101000
.........................................................................................................................TATTGTTCGTTTCTTAAAGGTGA..........................................................2330.33100010
................................................................TGCTTTGTCACGTCGTCGAACGGCT.................................................................................................................2530.33101000
..............................................................................................................................TTCGTTTCTTAAAGGTGATGGCGCTT..................................................2630.33100010
................................................................TGCTTTGTCACGTCGTCGAACGGCTT................................................................................................................2630.33101000
.........................................................................................................................................................TGAACAATTAAGAAGGACGCGACCAA.......................2630.33101000
............................................................AGCCTGCTTTGTCACGTCGTCGAAC.....................................................................................................................2530.33100010
..............................................................................................................................TTCGTTTCTTAAAGGTGATGGCG.....................................................2330.33100010
.............................................................................................................................GTTCGTTTCTTAAAGGTGATGGCGC....................................................2530.33101000
...................................................................................................................................TTCTTAAAGGTGATGGCGCTTTTG...............................................2430.33100010
..........................................................GAAGCCTGCTTTGTCACGTCGTCGAAC.....................................................................................................................2730.33101000
.......................................................................................................................CATATTGTTCGTTTCTTAAAGGTGATGG.......................................................2830.33101000
......................................................................................................................................................TTTTGAACAATTAAGAAGGACGCGACCA........................2830.33101000
.......................................................................................................................................TAAAGGTGATGGCGCTTTTGAACAAT.........................................2630.33100010
...................................................................................................................................TTCTTAAAGGTGATGGCGCTTTTGA..............................................2530.33101000
......................................................................................................TAAATCTGTTATGCAATCATATT.............................................................................2330.33100010
...........................................................................................................CTGTTATGCAATCATATTGT...........................................................................2030.33101000
............................................................AGCCTGCTTTGTCACGTCGTCGAACGG...................................................................................................................2730.33101000
.......................................................................................................AAATCTGTTATGCAATCATATTGT...........................................................................2430.33100010
...................................................CACAGCTGAAGCCTGCTTTGTCACGTC............................................................................................................................2730.33101000
..............AAACATTTGGTATAATTAGGGATACTGA................................................................................................................................................................2840.25100010
........................TATAATTAGGGATACTGACACCGCC.........................................................................................................................................................2540.25100010
.................................................TTCACAGCTGAAGCCTGCTTTGTCAC...............................................................................................................................2640.25101000
..........................TAATTAGGGATACTGACACCGCCTTCA.....................................................................................................................................................2740.25101000
....................................TACTGACACCGCCTTCACAGC.................................................................................................................................................2140.25101000
.............................TTAGGGATACTGACACCGCCTTCACAG..................................................................................................................................................2740.25100010
............................................CCGCCTTCACAGCTGAAGCCTGCTT.....................................................................................................................................2540.25101000
...................................................CACAGCTGAAGCCTGCTTTGTCACG..............................................................................................................................2540.25100010
............................ATTAGGGATACTGACACCGCCT........................................................................................................................................................2240.25101000
.............................................CGCCTTCACAGCTGAAGCCTT........................................................................................................................................2140.25100010
..........................................CACCGCCTTCACAGCTGAAGCCTGC.......................................................................................................................................2540.25101000
.............TAAACATTTGGTATAATTAGGGATACT..................................................................................................................................................................2740.25101000
.........................ATAATTAGGGATACTGACACCGCCT........................................................................................................................................................2540.25100010
..........................TAATTAGGGATACTGACACC............................................................................................................................................................2040.25100010
...............AACATTTGGTATAATTAGGGATACTGA................................................................................................................................................................2740.25100010
.......................................TGACACCGCCTTCACAGCTGAAGCC..........................................................................................................................................2540.25101000
..................................GATACTGACACCGCCTTCACAGC.................................................................................................................................................2340.25101000
..........................TAATTAGGGATACTGACACCGCC.........................................................................................................................................................2340.25101000
..............................TAGGGATACTGACACCGCCTTCAC....................................................................................................................................................2440.25101000
.............................................CGCCTTCACAGCTGAAGCCTGCTTTG...................................................................................................................................2640.25100010
.......................................TGACACCGCCTTCACAGCTGAAGCCTG........................................................................................................................................2740.25101000
..........................TAATTAGGGATACTGACACCGCCTTCTA....................................................................................................................................................2840.25101000
............ATAAACATTTGGTATAATTAGGGATAC...................................................................................................................................................................2740.25100010
dp5
CCG-AT------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAACCCTGACCGA----TACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
T---------------------------------------------------------------------------------------------------------------------------TCGTCAGCAGTCAGAGGGTCTGGGGCTCTTGAGATGCTGAGGAGAACAGGCGATACATTGTTTTTTGTGTC----TAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
AAT-CC------ACAAACAATTGGAACTATCAGCGATGCTGTAACTGAAGTACTGGAAGATACCTGTTTTGTAGCGTTATCAAACGGAGATAGTAACTGAACAATATCTTTTAATATTGCGACTTCGTCCGCAGTGAATGGTGTTGGTGCTTTAGACGTACTTAAAAGTACTTTCGAGATGGCCTCATTTGTAAG----TAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................................................................AAAAGTACTTTCGAGATGGCC..................2142.008080000
....................................................................................................................................................................AAAGTACTTTCGAGATGGCCT.................2141.506150000
..................................................................................................................................GCAGTGAATGGTGTTGGTGCT...................................................2150.603000021
.............................................................................................................................CGTCCGCAGTGAATGGTGTTG........................................................2150.603100020
.............................................................................TATCAAACGGAGATAGTAACT........................................................................................................2140.502010010
..........................................................................................................................CTTCGTCCGCAGTGAATGGTG...........................................................2140.502110000
....................................................................................................................................................................AAAGTACTTTCGAGATGGCCC.................2140.502020000
.........................................................................................................................ACTTCGTCCGCAGTGAATGGT............................................................2140.502001010
................................................................................................................................CCGCAGTGAATGGTGTTGGTG.....................................................2150.402000020
.................................................................................................................................CGCAGTGAATGGTGTTGGTGC....................................................2150.402020000
.........................................................................................................................................ATGGTGTTGGTGCTTTAGACG............................................2150.402002000
............................................................................................................................TCGTCCGCAGTGAATGGTGTT.........................................................2150.402000020
.......................................................................................................ATATCTTTTAATATTGCGACT..............................................................................2130.331010000
.......................................TGTAACTGAAGTACTGGAAGA..............................................................................................................................................2160.332020000
.......................................................................................................ATATCTTTTAATATTGCGAC...............................................................................2030.331010000
............................................................................................................TTTTAATATTGCGACTTCGTC.........................................................................2130.331010000
.......................................................................................................ATATCTTTTAATATTGCGACC..............................................................................2130.331010000
..........................................................................................................................CTTCGTCCGCAGTGAATGG.............................................................1940.251000010
...........................................................................................................................................................................TTTCGAGATGGCCTCATTTG...........2040.251100000
.....................................................................................................................................................................AAGTACTTTCGAGATGGCCTC................2140.251100000
..........................................................................................................................................................................CTTTCGAGATGGCCTCATTTG...........2140.251100000
......................................................................................................................................................TTTAGACGTACTTAAAAGTACT..............................2240.251001000
......................................................GGAAGATACCTGTTTTGTAGC...............................................................................................................................2140.251010000
..................................................................................................................................................................TAAAAGTACTTTCGAGATGGC...................2140.251010000
...................ATTGGAACTATCAGCGATGCT..................................................................................................................................................................2150.201000001
.................................................................................................................................CGCAGTGAATGGTGTTGGTG.....................................................2050.201001000
..........................................................................................................................................TGGTGTTGGTGCTTTAGACG............................................2050.201100000
...............................................................................................................................TCCGCAGTGAATGGTGTTGGTG.....................................................2250.201100000
..............................................................................................................................................GTTGGTGCTTTAGACGTACTT.......................................2150.201010000
................................................................................................................................CCGCAGTGAATGGTGTTGG.......................................................1950.201000010
..................AATTGGAACTATCAGCGATGC...................................................................................................................................................................2150.201010000
........................................................................................................................................AATGGTGTTGGTGCTTTAGACG............................................2250.201001000
...........................................................................................................................TTCGTCCGCAGTGAATGGTGT..........................................................2150.201001000
droBip1
AGG-CC------AAGTGTCGTGGGTATAATTAGGTTTACTGTGGTGGATTTAGCAGACGAAGTGTTTGATGTAGCTGCTTCAAAATGGTCCAATACGCTGCATATCTCCTTCATGGAATCAAATTGATCCTCGTTTAAGGGCAATGGTGCCTTTGAAGTATTTAAAAGGACTGTTGAAAGGTGTTCCCTTATACA----GAGSizeHit CountTotal NormTotal
No Reads
droKik1
AATCATAAGGCCGAGTGTCGTGGGTATAATTAAGTTTACTGTGGTGGATTTAGCAGACGAAGTGTTTAATGTAGTCGCTTCAAAATGGTCCAATACGCTGCATATCTCCTTCATGGAATCAAATTGATCCTCGTTTAAGGGCAATGGTGCCTTTGATGTATTTAAAAGGACTGTGCAAATGTGTTCCCTTACAAG----GAGSizeHit CountTotal NormTotal
No Reads
droFic1
TGC-ACAAGACCATTCGATTTGGGAATTATGCATGATACGGTTACTTTAGTACTCGAAGATAATTGAGTGGTAACTTCATCGAATGGAGCCAGCACGTCTTTTAAATCTTCCAAGACCGCAACATCGTCTGCAGCCAGGGGCTCCGGCGCCTTGGACAAACTTAGAATTACAGGCAGGATATGCTCCTTGGTCAA----TAGSizeHit CountTotal NormTotal
No Reads
droEle1
AAG-CC-----CATATGCCATGGGTATAATCAGAGATATGGTTACATATTTTCCACCAGAAACTTTTTCACTTGCTTGCTGGAAGAAAGACAATATTTTTTCCATATCTTTTAACACAAGTATTTCGTCAGCCGTAAATGGCTGAGGTGCATTTGTGGTTCCTAATAGGACTTTGGCAATGGCATCATTTGTTTT----TAASizeHit CountTotal NormTotal
No Reads
droRho1
TGG-ACAACTCCATTGGAAATGGGAATTACGCTGGACACAGTCACTTTTGTGCTCGAAGACAATAGTTTCGTAACTTCATCAAATGGAGCTAGAACGTCTTGCAAATCCTCTAGTAAAGAAACGTCGTCTGCTG---------CCGGCGCCTTGGACCAGGTAAGCAGTACGGGAGAAATAAACTCTTTGGTCAA----GAGSizeHit CountTotal NormTotal
No Reads
droBia1
ACG-CC------A-------CCGGTATTCTTAAAGAAATTGTCACCTTTGTATCGCCAGAGAAATAATGCGTAGCATCATCAAAAATTTTTAAAAACTCGCAAATGTCAGTCAGGAGGTTTATTTCATCTGTATTTAAAATTTGCTCCGACTTCGGAGTATTTAACAGAACTGAGCTGATTTCATTTTTCAGTTGCAAAAAASizeHit CountTotal NormTotal
No Reads
droTak1
AGG-CG------AAGTACTGTGGGTATTATTAGGGATATGGTTACCGTTTTCGCAGCCGACGTATTCACTGTTGCCGTTTTAAAGGGATCTAAAAGTGTGCAAATATCTTCAAT-AAAGAAAATTGCTCCTCACTTAAGGGAACTGGAGCTTTTAATGTTTTTAGCAAAACTCCGCAAACTGCCTCTCGAACGAG----TAASizeHit CountTotal NormTotal
No Reads
droEug1
ACG-CC------A-------CCGGTATCATTAAAGAAATTGTCACCTTTGCATCGCCAGAGA--CAATGCGTAGCATCGTTAAAAATTTTTAAAAGCTCGCAAATGTCAGTCAGCAGGTTTATGTCATTTGCATTTAACATCTGCTCCGACTTCGGAGTATTTAACAAAACTGAGTTGATTTTATTTTTCAGTTG----CAASizeHit CountTotal NormTotal
No Reads
dm3
AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCACGGCAGAAATGGAGTCATTTACTAA----AATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................................................................................................................................CACGGCAGAAATGGAGTCATT.............21115.00150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200150000000000000001100000000000000000000000000000000000
.A-------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCACGGCAGAAATGGAGT.................21115.00150000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000011000000000010000000000000000000000000000000000000000000000000000002300020000000000000000010000000000000000000000000101000000
AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCACGGCAGAAATGGAGTCATT.............26114.00140000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000030000000000000000000000000000000000000000000100000001000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111000000
AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCACGGCAGAAATGGAG..................21113.00130000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000040000000000000000300000000010000000000000000001000000
.A-------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCACGGCAGAAATGGAGTCATT.............25113.00130000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000010000000000000000000000000000000000000100000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000011000000
........................................................................................................................................................................CACGGCAGAAATGGAGTCATTTAC..........2418.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000100000000000100110000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000
.....................................................................................................................................................................AAGCACGGCAGAAATGGAGTC................2118.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300010000000000000000003000000100000000000000000000000000
........................................................................................................................................................................CACGGCAGAAATGGAGTCATTTACTA........2617.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000002000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001020000000
........................................................................................................................................................................CACGGCAGAAATGGAGTCATTTAAA.........2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................GCAGAAATGGAGTCATTTAC..........2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000220000000000000000000000000000000000000000000000000000
.A-------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCACGGCAGAAATGGAGTC................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000010000000000000000001000000000000000000000000000000000
.A-------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCACGGCAGAAATGGAGTCAT..............2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.A-------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCACGGCAGAAATGGAG..................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000
AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCACGGCAGAAATGGAGA.................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000002000000000000000000000000000000000
...........................................................................................................................................................................GGCAGAAATGGAGTCATTTACTAA----AA.2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
.A-------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCACGGCAGAAATGGAGTT................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................GCACGGCAGAAATGGAGTC................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
.....................................................................................................................................................................AAGCACGGCAGAAATGG....................1712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCACGGCAGAAATGGAGTCAT..............2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................AGCACGGCAGAAATGGAGTCA...............2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................GCAGAAATGGAGTCATTTACT.........2112.0020000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
......................................................................................................................................................................AGCACGGCAGAAATGGAGTCATTTAC..........2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................ACGGCAGAAATGGAGTCATTTAC..........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................GCAGAAATGGAGTCATTTACTAA----AA.2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCACGGCAGAAATGGA...................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................................................CACGGCAGAAATGGAGTCATC.............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................................AGCACGGCAGAAATGGAGTCATT.............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCACGGCAGAAATGGAGTA................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................AGCACGGCAGAAATGGAGTC................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................ACGGCAGAAATGGAGTCATTTA...........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.............................................................................................................................................................................CAGAAATGGAGTCATTTACTA........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................CACGGCAGAAATGGAGTCATTTACA.........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.A-------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCACGGCAGAAATGGAA..................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..................................................................................................................................................................................ATGGAGTCATTTACTAA----AAT2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AAA-TC------ATAAATAAGAGGTATTATTACGGAAATCGAAAGAGTTTTGTTTGTCGATATCTGCACTGTGGCTTCGTGAAACGGAGCTAGAACTTGACATATCTCAACCAGAACGATCATTTCGTCCGCTGATAATGGTCTTGGAGCTTTGGTTGAGTTAAGAAGCACTGCAGAAAGCGAGTCATTTACTAA----AATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................TTTGTTTGTCGATATCTGCACTGTGGC...............................................................................................................................27112.001200000019020000000
.................................................TTGTTTGTCGATATCTGCACTGTGGC...............................................................................................................................26112.001200000009030000000
.................TAAGAGGTATTATTACGGAAATCGAA...............................................................................................................................................................26111.001100000009020000000
..................AAGAGGTATTATTACGGAAATCGAA...............................................................................................................................................................25110.0010000000010000000000
................ATAAGAGGTATTATTACGGAAATCGAA...............................................................................................................................................................2717.00700000007000000000
...........................................................................TTCGTGAAACGGAGCTAGAACTTGACA....................................................................................................2714.00400000002020000000
......................................................................................................TATCTCAACCAGAACGATCATTTCGTC.........................................................................2714.00400000022000000000
..................................................................................AACGGAGCTAGAACTTGACATATCTC..............................................................................................2643.751500200049000000000
..................................................TGTTTGTCGATATCTGCACTGTGGC...............................................................................................................................2513.00300000001020000000
.................................................................................................TGACATATCTCAACCAGAACGATCATT..............................................................................2713.00300000000210000000
............................................................TATCTGCACTGTGGCTTCGTGAAACGGAG.................................................................................................................2913.00300000021000000000
................................................................TGCACTGTGGCTTCGTGAAACGGAGC................................................................................................................2613.00300000020100000000
..........................................................................................TAGAACTTGACATATCTCAACCAGAACGA...................................................................................2913.00300000020100000000
.................................GGAAATCGAAAGAGTTTTGTTTGTCGA..............................................................................................................................................2712.00200000020000000000
...........................................................................TTCGTGAAACGGAGCTAGAACTTGACATA..................................................................................................2912.00200000002000000000
............................................................TATCTGCACTGTGGCTTCGTGAAACG....................................................................................................................2612.00200000020000000000
.......................................................................................................................................TAATGGTCTTGGAGCTTTGGTTGAGT.........................................2622.00400000010011100000
..............AAATAAGAGGTATTATTACGGAAATCGAA...............................................................................................................................................................2912.00200000002000000000
.................................................................................................TGACATATCTCAACCAGAACGATCAT...............................................................................2612.00200000010010000000
............................................................TATCTGCACTGTGGCTTCGTGAAACGG...................................................................................................................2712.00200000020000000000
..............................................................TCTGCACTGTGGCTTCGTGAAACGGAGC................................................................................................................2812.00200000020000000000
..........................................................................................................................TTTCGTCCGCTGATAATGGTCTTGGA......................................................2621.50300000020001000000
...............................................................................TGAAACGGAGCTAGAACTTGACATA..................................................................................................2551.40700000032020000000
.............TAAATAAGAGGTATTATTACGGAAATCGAAA..............................................................................................................................................................3111.00100000010000000000
..............................................................TCTGCACTGTGGCTTCGTGAAACGG...................................................................................................................2511.00100000010000000000
...........................................................................TTCGTGAAACGGAGCTAGAACT.........................................................................................................2211.00100000001000000000
....................................................................................................................................TGATAATGGTCTTGGAGCTTTGGTTGAGT.........................................2921.00200000002000000000
.....................................................................TGTGGCTTCGTGAAACGGAGCTAGAAC..........................................................................................................2711.00100000001000000000
.................TAAGAGGTATTATTACGGAAATCGAG...............................................................................................................................................................2611.00100000000010000000
...........................................................................................................................................................................TGCAGAAAGCGAGTCATTTACTA........2311.00100000000010000000
...........................TATTACGGAAATCGAAAGAGTTTTGTT....................................................................................................................................................2711.00100000000001000000
................................................................................................TTGACATATCTCAACCAGAACGATCA................................................................................2611.00100000000000010000
...................AGAGGTATTATTACGGAAATCGAAAGA............................................................................................................................................................2711.00100000010000000000
................................................................TGCACTGTGGCTTCGTGAAACGGA..................................................................................................................2411.00100000000000010000
....TC------ATAAATAAGAGGTATTATTACGGA......................................................................................................................................................................2611.00100000000100000000
........................................................................................................TCTCAACCAGAACGATCATTTCGTC.........................................................................2511.00100000010000000000
................................................................................................................................................................TTAAGAAGCACTGCAGAAAGCGAGT.................2511.00100010000000000000
................................................................TGCACTGTGGCTTCGTGAAACGG...................................................................................................................2311.00100000000100000000
..............................................................TCTGCACTGTGGCTTCGTGAAACGGA..................................................................................................................2611.00100000010000000000
.............TAAATAAGAGGTATTATTACGGAAATCGAA...............................................................................................................................................................3011.00100000010000000000
.........................................................................................CTAGAACTTGACATATCTCAACCAG........................................................................................2511.00100000000100000000
........................................................................................................TCTCAACCAGAACGATCATTTCGTCCGC......................................................................2811.00100000001000000000
.................................GGAAATCGAAAGAGTTTTGTTTGTCG...............................................................................................................................................2611.00100000010000000000
................................................................TGCACTGTGGCTTCGTGAAACGGAA.................................................................................................................2511.00100000010000000000
...................AGAGGTATTATTACGGAAATCGAA...............................................................................................................................................................2411.00100000010000000000
.................TAAGAGGTATTATTACGGAAATCGA................................................................................................................................................................2511.00100000001000000000
.................TAAGAGGTATTATTACGGAAATC..................................................................................................................................................................2311.00100000001000000000
.............................................................................CGTGAAACGGAGCTAGAACTTGACA....................................................................................................2521.00200000000200000000
...................................................................................................................................................................AGAAGCACTGCAGAAAGCGAGTCAT..............2511.00100000000000010000
................................................................TGCACTGTGGCTTCGTGAAACGGAGAA...............................................................................................................2711.00100000000000010000
..................AAGAGGTATTATTACGGAAATCGAAAGA............................................................................................................................................................2811.00100000001000000000
................................................TTTGTTTGTCGATATCTGCACTGTGG................................................................................................................................2611.00100000001000000000
......................................................................................................TATCTCAACCAGAACGATCATTTC............................................................................2411.00100000000100000000
..................................................................................AACGGAGCTAGAACTTGACATATCT...............................................................................................2541.00400000004000000000
...................................................................................................ACATATCTCAACCAGAACGATCATT..............................................................................2511.00100000001000000000
.................................................................................................................GAACGATCATTTCGTCCGC......................................................................1931.00300000000300000000
..............................................................................................ACTTGACATATCTCAACCAGAACGA...................................................................................2511.00100000010000000000
..........................TTATTACGGAAATCGAAAGAGTT.........................................................................................................................................................2311.00100000000001000000
......................................................................................................TATCTCAACCAGAACGATCATTT.............................................................................2311.00100000001000000000
............................................GAGTTTTGTTTGTCGATATCTGCACT....................................................................................................................................2611.00100000010000000000
...................................................................................ACGGAGCTAGAACTTGACATATCTCA.............................................................................................2640.75300000030000000000
..................................................................................AACGGAGCTAGAACTTGACATATCTCA.............................................................................................2740.75300000011001000000
...................................................................................ACGGAGCTAGAACTTGACATATCTC..............................................................................................2540.75300000001200000000
..................................................................................AACGGAGCTAGAACTTGACATATC................................................................................................2440.75300000001110000000
...............................................................................................................................TCCGCTGATAATGGTCTTGGAGCT...................................................2420.50100000000100000000
............................................................................TCGTGAAACGGAGCTAGAACTTGACATA..................................................................................................2820.50100000000010000000
............................................................................................................................TCGTCCGCTGATAATGGTCTTGGAG.....................................................2520.50100000000010000000
...........................................................................................................................TTCGTCCGCTGATAATGGTCTTGGAGC....................................................2720.50100000000001000000
....................................................................................................................................TGATAATGGTCTTGGAGCTTTGGTTG............................................2620.50100000000010000000
....................................................................................................................................TGATAATGGTCTTGGAGCTTTGGT..............................................2420.50100000001000000000
..............................................................................................................................GTCCGCTGATAATGGTCTTGGAGCTT..................................................2620.50100000000100000000
...............................................................................TGAAACGGAGCTAGAACTTGACATATC................................................................................................2740.50200000000101000000
.......................................................................................................................................TAATGGTCTTGGAGCTTTGGT..............................................2120.50100000001000000000
....TC------ATAAATAAGAGGTATTATT...........................................................................................................................................................................2120.50100000010000000000
.............................................................................CGTGAAACGGAGCTAGAACTTGACATA..................................................................................................2720.50100100000000000000
...........................................................................................................................TTCGTCCGCTGATAATGGTCTTGGA......................................................2520.50100000010000000000
................................................................................GAAACGGAGCTAGAACTTGACATA..................................................................................................2450.40200000020000000000
.....................................................................................GGAGCTAGAACTTGACATATCTCA.............................................................................................2440.25100000010000000000
.................................................................................AAACGGAGCTAGAACTTGACATATCTC..............................................................................................2740.25100000010000000000
.........................................................................................CTAGAACTTGACATATCTCA.............................................................................................2040.25100100000000000000
................................................................................GAAACGGAGCTAGAACTTGACATATC................................................................................................2640.25100000000001000000
...............................................................................TGAAACGGAGCTAGAACTTGACATATCT...............................................................................................2840.25100000001000000000
................................................................................GAAACGGAGCTAGAACTTGACATATCTC..............................................................................................2840.25100000000010000000
...............................................................................TGAAACGGAGCTAGAACTTGACATAT.................................................................................................2650.20100000000100000000
..............................................................................GTGAAACGGAGCTAGAACTTGACATA..................................................................................................2650.20100000000100000000
..................................................................................AACGGAGCTAGAACTTGACATAT.................................................................................................2350.20100000000100000000
droSec2
TC----------ATAAATAAGAGGTATTATTACGGAAATCGAAAGAGTTTTGTTTGTCGATATCTGCACTGTGGCTTCGTGAAACTGAGCTAGAACTTGACATATCTCAACCAGAACGAACATTTCGTCCGCTGATAATGGTCTTGGATCTTTGGTTGAGTTTAGAAGCAATGCAGAAAGCGAGTCATTTACTAA----AATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................CTGATAATGGTCTTGGATCTT..................................................2120.5011000
.................................................TTGTTTGTCGATATCTGCA......................................................................................................................................1920.5010010
........................TATTATTACGGAAATCGAAAGAGTT.........................................................................................................................................................2520.5010010
............................................................................................................................................................TGAGTTTAGAAGCAATGCAGA.........................2120.5011000
droYak3
AAG-CC------ATATACTGTAGGAATGATGAACGATATTGTTACAT---TGTTGGACGATATTTGACGTGTGGCCTTATCAAATGATTGCAGCAATAAAATCAACTCTTTAATGAAAGATAGCTGGTCAACATTTAATGGAGCTGGCGCCTTAGAAGTGCTAAGCAGTTCTTTTTTAATGGCCTCGTTAATCAT----TACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............ATATACTGTAGGAATGATGAACGATAT...................................................................................................................................................................2712.00200000000002
....................TAGGAATGATGAACGATATTGTTACAT---........................................................................................................................................................2712.00201000010000
................................................................................................TAAAATCAACTCTTTAATGAAAGA..................................................................................2411.00101000000000
............ATATACTGTAGGAATGATGAACGATA....................................................................................................................................................................2611.00100000010000
.....................................................TGGACGATATTTGACGTGTGGCCTTAT..........................................................................................................................2730.33101000000000
....................................................TTGGACGATATTTGACGTGTGGCC..............................................................................................................................2430.33101000000000
....................................................TTGGACGATATTTGACGTGTGGCCT.............................................................................................................................2530.33100100000000

Generated: 05/15/2015 at 02:31 PM