ID:

dmo_960

 Coordinate:

scaffold_6496:4208486-4208778 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.1

Flybase annnotation

CDS [Dmoj\moj29-cds]; CDS [Dmoj\moj29-cds]; exon [dmoj_GLEANR_4892:2]; exon [dmoj_GLEANR_4892:3]; intron [Dmoj\moj29-in]

No Repeatable elements found

mature
star
  1. scaffold_6473:792113-792129 +
  2. scaffold_6473:5217135-5217151 +
  3. scaffold_6473:9578632-9578648 +
  4. scaffold_6473:12032048-12032064 +
  5. scaffold_6473:14385111-14385127 +
  6. dmo_960  scaffold_6496:4208587-4208603 +
  7. scaffold_6496:5458716-5458732 +
  8. scaffold_6496:7272160-7272176 +
  9. scaffold_6500:1977609-1977625 +
  10. scaffold_6500:12002653-12002669 +
  11. scaffold_6500:20149010-20149026 +
  12. scaffold_6540:11033443-11033459 +
  13. scaffold_6540:17721709-17721725 +
  14. scaffold_6540:19149931-19149947 +
  15. scaffold_6540:26592567-26592583 +
  16. scaffold_6540:31995823-31995839 +
  17. scaffold_6540:33792788-33792804 +
  18. scaffold_6680:2028480-2028496 +
  19. scaffold_6680:5231981-5231997 +
  20. scaffold_6680:13526679-13526695 +

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AAGACCGTGAGGAACTTCAAGGAGCTGGCTGAGAAGCCACAAGGCGAGGGGTAAGTGAATATAAACACAGTTAGAATTCACATAAACACACACACACGCAAGTAGTTAAGATAGCTGTAGCTGTATGCATACACACTATTTCTATATACATGTATGTGTGTGTGTGTTTCTCTATATAGCTGCATTTATAGGTTAGAGCCGGCGTGTATTGCTATCAATTACGTGGCCTTTAACTGTAGATGAGTTAACAAAAGAAGGAAATTAAGTTATTTATCAACTGAGAGCTTACACTAATATGCCCATTGTGCCACTGTGCCATTTCTTCTGCTTATCATTTCTATAGCTACAAGGGCAGCAAGTTCCATCGCATCATCAAGGACTTTATGATCCAGG
*********************************************************************************************************************.......(((((((((((((((............))).)))))))))))).********************************************************************************************************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 V049
head
 V056
head
.................CAAGGAGCTGGCTGAGAAGC.................................................................................................................................................................................................................................................................................................................................................................... 20 0 1 5.00 5 3 2 0 0
...............TTCAAGGAGCTGGCTGAGA....................................................................................................................................................................................................................................................................................................................................................................... 19 0 1 2.00 2 2 0 0 0
..............................GAGAAGCCACAAGGCGAGGGCTA.................................................................................................................................................................................................................................................................................................................................................... 23 1 1 1.00 1 0 0 1 0
................TCAAGGAGCTGGCTGAGAA...................................................................................................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0
................TCAAGGAGCTGGCTGAGAAG..................................................................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0
....................................................................................................................................................................................................................................................................................ACTGAGAGCTTACACTAATC................................................................................................. 20 1 1 1.00 1 0 1 0 0
.................................................................................................................................................................................................................................................................................................................................................................AGCAAGTTCCATCGCATCATCAA................. 23 0 1 1.00 1 1 0 0 0
........GAGGAACTTCAAGGAGCTGGCTGAGA....................................................................................................................................................................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0
..............CTTCAAGGAGCTGGCTGAGA....................................................................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0
..........................................................................................................................................................................................................................................................................................................................................................................CATCGCATCATCAAGGACTTTATG....... 24 0 1 1.00 1 1 0 0 0
.............ACTTCAAGGAGCTGGCTGAGA....................................................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
.AGACCGTGAGGAACTTCAAGGAGC................................................................................................................................................................................................................................................................................................................................................................................ 24 0 1 1.00 1 0 1 0 0
.................CAAGGAGCTGGCTGAGAA...................................................................................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0
....CCGTGAGGAACTTCAAGGA.................................................................................................................................................................................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0
.............................TGAGAAGCCACAAGGCGAGG........................................................................................................................................................................................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0
...........................GCTGAGAAGCCACAAGGCGAGG........................................................................................................................................................................................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0
..............CTTCAAGGAGCTGGCTGAGAAGC.................................................................................................................................................................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0
.....................................................................................................................................................................................................................................................................................................................................................................AGTTCCATCGCATCATCAA................. 19 0 1 1.00 1 1 0 0 0
..................AAGGAGCTGGCTGAGAAGCCACAAG.............................................................................................................................................................................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0
.....................................................................................................................TAGCTGTATGCATACACACTATTTCT.......................................................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0
..............................................................................................................................................................................................................................................................................................................................................................GGCAGCAAGTTCCATCGCATCATCAAG................ 27 0 1 1.00 1 1 0 0 0
.......................................................................................................................................................................................................................................................................................................................................................................TTCCATCGCATCATCAAGGACTTTATG....... 27 0 1 1.00 1 1 0 0 0
...............TTCAAGGAGCTGGCTGAGAAGC.................................................................................................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0
..GACCGTGAGGAACTTCAAGGAGCTGGC............................................................................................................................................................................................................................................................................................................................................................................ 27 0 1 1.00 1 0 1 0 0
..............................GAGAAGCCACAAGGCGAGG........................................................................................................................................................................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0
..............CTTCAAGGAGCTGGCTGAGAA...................................................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
................TCAAGGAGCTGGCTGAGA....................................................................................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0
..........................................................................................................................................................................................................................................................................................................................................................................CATCGCATTATCCAGGAC............. 18 2 3 0.33 1 0 0 0 1
................................................................................................................................................................................................TTAGTGCCGGAGTGCATTGC..................................................................................................................................................................................... 20 3 4 0.25 1 0 0 1 0
.......................................................................................................................................................................................................................................................ACAAAAGAAGGAGATTAAT............................................................................................................................... 19 2 7 0.14 1 0 1 0 0
.............................................................................................ACACGCAACTTGTTAAGACA........................................................................................................................................................................................................................................................................................ 20 3 8 0.13 1 1 0 0 0
..................................................................................................................................................................................ACTGCTTTTATAGGTTAGA.................................................................................................................................................................................................... 19 2 9 0.11 1 0 0 0 1
...............TTCAAGAAGGTGGCTAAGAA...................................................................................................................................................................................................................................................................................................................................................................... 20 3 14 0.07 1 0 1 0 0
.......................................................................................................................................................GTATGTGTGTGTGTGTT................................................................................................................................................................................................................................. 17 0 20 0.05 1 0 0 0 1

Anti-sense strand reads

TTCTGGCACTCCTTGAAGTTCCTCGACCGACTCTTCGGTGTTCCGCTCCCCATTCACTTATATTTGTGTCAATCTTAAGTGTATTTGTGTGTGTGTGCGTTCATCAATTCTATCGACATCGACATACGTATGTGTGATAAAGATATATGTACATACACACACACACAAAGAGATATATCGACGTAAATATCCAATCTCGGCCGCACATAACGATAGTTAATGCACCGGAAATTGACATCTACTCAATTGTTTTCTTCCTTTAATTCAATAAATAGTTGACTCTCGAATGTGATTATACGGGTAACACGGTGACACGGTAAAGAAGACGAATAGTAAAGATATCGATGTTCCCGTCGTTCAAGGTAGCGTAGTAGTTCCTGAAATACTAGGTCC
*********************************************************************************************************************************************************************************************************************************.......(((((((((((((((............))).)))))))))))).********************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V056
head
 M060
embryo
 V049
head
 M046
female body
.........TACTTGAAGTCCCTCGAACGA........................................................................................................................................................................................................................................................................................................................................................................... 21 3 3 1.33 4 0 3 0 1
..............................................................................................................................................................................................CCCATCTCAGTCGCACATAAC...................................................................................................................................................................................... 21 3 1 1.00 1 1 0 0 0
..................................................................................................................................................................................................................................................................................GTTGCGTCTCGAATGAGATTAT................................................................................................. 22 3 1 1.00 1 1 0 0 0
.............................................................................................................CTATCGACATCGACACAAGT........................................................................................................................................................................................................................................................................ 20 2 2 0.50 1 0 0 1 0
..................................................TATTCACTTATATTTGTGACAAG................................................................................................................................................................................................................................................................................................................................ 23 3 3 0.33 1 1 0 0 0
....................................................................................................................................................................................................................................................................................................................GTGACACGGTTTAGAAGA................................................................... 18 2 5 0.20 1 0 0 1 0
....................................................................................................................................................................................................................................................................................................................GTGACACGGTAGAGGAGAGG................................................................. 20 3 8 0.13 1 0 1 0 0
.............................................................................................................CTATGGACATCGACACAAGT........................................................................................................................................................................................................................................................................ 20 3 8 0.13 1 0 0 1 0
....................................................................................................................................................................................................................................................................................................................GGGACGCGGTAGAGAAGACG................................................................. 20 3 16 0.06 1 0 1 0 0
..........................................................................................................................................................................................................................................................................................................GGGTAGCTCGGTGAGACGGT........................................................................... 20 3 19 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6496:4208436-4208828 + dmo_960 AAGACCGTGAGGAACTTCAAGGAGCTGGCTGAGAAGCCACAAGGCGAGGGGTAAGTGA---------ATATAA-----A--C--------ACAGTTAGAATTCACA------TAAA--CACACACACACGCA------------------AGTAGTT---AAGATAGCTGTA-------------GCTGTATGCATACACACTATTTCTATATACATGTATGTGTGTGTGTGTTTCTCTATATAGCTGCA----TTTATAGGTTAGA---GCCGGCGT-GTAT-T------------G--C-TATCAATTACGTGGCCTT-TAAC-T---GTAGATGAGTTAACAAAAGAAG------GA-AATTAAGTTATTTATCA----------------------------------------------------------------------ACTGAGAGCTTACACTAATATGCCCATTGTGCCACTGTGCC--------------------------------------------A-TTTCT--------------------------TCTGCTTA-TCATTTC------TATAGCTACAAGGGCAGCAAGTTCCATCGCATCATCAAGGACTTTATGATCCAGG
droVir3 scaffold_12875:1142858-1143231 + dvi_4820 AAGACCGTGAAGAACTTCAAGGAGCTGGCCGAGAAGCCGCAAGGCGAGGGGTAAGCAA---------AAAA------AACAAAACGAAGCGCCGTTA--ATTGGCCCAGCAATACG--CACACACACGCACAC--GTA------------TGCAGTT--------AGCTGTA-------------AGTGTGTA----CACACTACTCG------CAT------------------------------GTA----TTTATAGGTTAGA---ACGGGAGT---------------AGT-TC-A-TATCAATTACGTGGCGTT-TAAC-T---GAGAATTAGTTGACAAAAGCGACTAATCCA-AATTGAACTGTTTACCA----------------------------------------------------------------------ACTGCT--GTGACACTAATTTGCCCATTGTGT----TTGCT--------------------------------------------TGCTTCTTCTACTTCTATCCGAATC------------------TGTTTA------TATAGCTACAAGGGCAGCAAGTTCCATCGCATCATCAAGGACTTTATGATCCAGG
droGri2 scaffold_15245:9836646-9836999 - AAGACTGTGAGGAACTTCAAGGAATTGGCTGAGAAACCACAGGGCGAGGGGTAAGTGT---------TAATAACCCTTATTC--------ACCGTTA--ATTGGCC------TACA--CACACACTCA-----GCTACAACATACACGTAG------------------------------------------------------------------------------------------------ACA----TTTATAGGTTAGA---GCCGGAGT---------------AGTTG--C-TATCAATTACGTGGCGTT-TAAG-T---GAGAATTAGTTAACAAAGCGAC-----GAG---C-------------------AAC---GAGCA-GAAATATTGTGTGACAAATTGATATGTTTACG---------------------TCTGAT--TTGAATCTAATTTGACAATTGT----------------------------------------------------------------TAATTCT-----ACTCTGTTTA-T-------TTACACCTATGTAAAAATAGCTACAAGGGCAGCAAGTTCCATCGCATTATCAAGGACTTTATGATCCAGG
droWil2 scf2_1100000004513:4293020-4293368 - dwi_887 AAGACGGTGAGGAACTTCAAGGAGTTGGCCGAGAAGCCTCAAGGAGAGGGGTAAGTGA---------AATA------GATTA--------AC------------------CGTGCAATTGAATACAATTGCA------------------ATGAGTGCGAAAGAGAG--GCGGCTAGACCA------------------------------------------------------------------AGA----TTTATAGGTTAGATAATTCAAGAC---------------GCT-TCAATAATAAACTACGTGGCCTT-TTGC-TATGGGAAATTGTTTAACAAAAGCAA------CA-AATTAA--------------------------------------------------TGTAAATTCGTTTGTGCAAATTCAATTAAAG-----------------------------------------TGTTTACTAATTTATTTATTCCCTGTTGCTGTTTTGCTCTTTTC---------------------------------TT--------TGTGTG------TCTAGTTACAAGGGCAGCAAGTTCCATCGCATCATCAAGGACTTTATGATCCAGG
dp5 3:15792872-15793165 - AAGACCGTGAAGAACTTCAAGGAGCTGGCGGAGAAGCCACAGGGCGAGGGGTGAGTTCTTGAGATGTGCTT------GATTA--------AC------------------GGTACA--CGCACACTAGCACAC------------------------------------------------------------------------------------------------------------------ACA----TTTATAGGTTAG-----CC---------GTAGGAAAGTCAGTT-----TAGCAATTACGTGGCGTT-TCAGAC---GTCAATCAGTTGACAAAGAAAATCTCTACG-AACTAAATTGTTTATCTGCCTTAAT---GAGACAACAAT-----------------------------------------------------------------------------------------G---------TCTGTGTT------------------------------------------------------------------TTGCACCCA------CACAGCTACAAGGGAAGCAAGTTCCACCGCATCATCAAGGACTTTATGATCCAGG
droPer2 scaffold_4:3258050-3258343 + AAGACCGTGAAGAACTTCAAGGAGCTGGCGGAGAAGCCACAGGGCGAGGGGTGAGTTCTTGAGATGTGCTT------GATTA--------AC------------------GGTACA--CGCACACTAGCACAC------------------------------------------------------------------------------------------------------------------ACA----TTTATAGGTTAG-----CC---------GTAGGAAAGTCAGTT-----TAGCAATTACGTGGCGTT-CCAGAC---GTCAATCAGTTGACAAAGAAAATCTCTACG-AACTAAATTGTTTATCTGCCTTAAT---GAGACAACAAT-----------------------------------------------------------------------------------------G---------TCTGTGTT------------------------------------------------------------------TTGCACCCA------CCCAGCTACAAGGGAAGCAAGTTCCACCGCATCATCAAGGACTTTATGATCCAGG
droAna3 scaffold_13266:7221028-7221334 + AAGACCGTGAGGAACTTCAAGGAGCTGGCGGAGAAGCCCCAGGGCGAAGGGTAAGCT-----GGGGGTCTT------GATTA--------AC------------------GGCAAA--CCCACACTATCTCCGACTAGAAC---------------------------------------GATAGTC-----------------------TATATATGTATGTG----------------------------------T-GGG--GA---GCCAGGGG---------------TCT-TC---AAGCAATTACGTGGCGTT-TGAG-A---GGCAATCAGTTGACAAAGCAAATCTCTGAG---C-------------------AAT---GGGATAACAAT-----------------------------------------------------------------------------------------G---------GT--------------------------------TCT----TTCTTTTCTATTCT--TCTATTTAT---TGCGC-TTCAACCA------CTCAGCTACAAGGGTAGCAAGTTCCACCGCATCATCAAGGACTTCATGATCCAGG
droBip1 scf7180000396384:39130-39447 + AAGACCGTGAGGAACTTCAAGGAGCTGGCGGAGAAGCCCCAGGGCGAAGGGTAAGTT-----GCGGTTCTT------GATTA--------AC------------------GGCAAA--CCTACACTAGCGCAGACTAGAAC---------------------------------------GATAGGCTATATA----CATAATA---------------------------CATTC------------TA----TGTATGGGG--GA---GCCAGGGG---------------TCT-TC---AAGCAATTACGTGGCGTT-TGAG-A---AGCAATCAGTTGACAAAGCAAATCTCAGAG---C-------------------AAT---GGGATAACAAT-----------------------------------------------------------------------------------------G---------CC--------------------------------TTT----TTCTTTTCTATTCT--TCTATTTAT---TGCGC-TTCAACCA------TATAGCTACAAGGGTAGCAAGTTCCACCGCATCATCAAGGACTTCATGATCCAGG
droKik1 scf7180000302471:303915-304191 + AAGACCGTGAGGAACTTCAAGGAGCTGGCCGAGAAGCCCCAGGGCGAGGGGTAAGTAC---------GCTT------GATTA--------AC------------------GGCACA--CGTACACCAGTGCCG------------------------------------------------------------------------------------------------------------------AGA-----TTGTAGGTTATA---GCGCGGCTCGCCG-A------------G--CGAAGCCATTACGTGGCTCTATGGC-G---GGTTATCTGGGGACTTTGCAAAGCGGGGAAAATGGAAAC--------------AATTAAGCGACAACGAG-----------------------------------------------------------------------------------------T------------GTT------------------------------------------------------------CTCTGCTTC-TGTGATT------CGCAGCTACAAGGGCAGCAAGTTCCACCGCATCATCAAGGACTTCATGATCCAGG
droFic1 scf7180000454066:2476496-2476554 - T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTG------TGCAGCTACAAGGGCAGCAAGTTCCACCGCATCATCAAGGACTTCATGATCCAGG
droEle1 scf7180000491022:120159-120217 - T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTT------TGCAGCTACAAGGGCAGCAAGTTCCACCGCATCATCAAGGACTTCATGATCCAGG
droRho1 scf7180000779246:7911-7980 + TA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATGT----------------------------------------------------------------------TTTCCA------TGCAGCTACAAGGGCAGCAAGTTCCACCGCATCATCAAGGACTTCATGATCCAGG
droBia1 scf7180000302143:2129694-2129752 + T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTT------CGCAGCTACAAGGGCAGCAAGTTCCACCGCATCATCAAGGACTTCATGATCCAGG
droTak1 scf7180000415739:430823-430887 - TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTCCCC------CGCAGCTACAAGGGCAGCAAGTTCCACCGCATCATCAAGGACTTCATGATCCAGG
droEug1 scf7180000409672:6462983-6463045 - AT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTA------TGCAGCTACAAGGGCAGCAAATTCCACCGTATCATTAAGGACTTCATGATCCAGG
dm3 chr2R:20461487-20461571 + ACTGTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATT---GCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACATTA-TTTTGTC------AGGTACTACAATGGACACATATTCCATCGCGTGATCAAGGGCTTCATGGTGCAGA
droSim2 2r:19059187-19059242 - C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCAGCTACAAGGGCAGCAAGTTCCACCGCATCATCAAGGACTTCATGATCCAGG
droSec2 scaffold_9:1831850-1831918 - CT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCT-TACACCC------CGCAGCTACAAGGGCAGCAAGTTCCACCGCATCATCAAGGACTTCATGATCCAGG
droYak3 2R:20431313-20431397 + ACTGTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATT---GTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACATAT-TGCTATT------AGGTACTACAATGGCCACATATTCCATCGCGTGATCAAGGGCTTCATGGTGCAGA
droEre2 scaffold_4784:11756882-11757025 + TACACGATAGAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAACATATGTATGTATGTATTTATTTTTGTATATAAGTGGATATAATTAATGGATAT-----AT---------GTAGC---------------AGCAAATCACATTGTGTT-CA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTC-------------------------------------------GTAATA------CATGGTTGTAAAAAAG-------------------AAGAGACTAAATCTTCTCAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
AAGACCGTGAGGAACTTCAAGGAGCTGGCTGAGAAGCCACAAGGCGAGGGGTAAGTGA---------ATATAA-----A--C--------ACAGTTAGAATTCACA------TAAA--CACACACACACGCA------------------AGTAGTT---AAGATAGCTGTA-------------GCTGTATGCATACACACTATTTCTATATACATGTATGTGTGTGTGTGTTTCTCTATATAGCTGCA----TTTATAGGTTAGA---GCCGGCGT-GTAT-T------------G--C-TATCAATTACGTGGCCTT-TAAC-T---GTAGATGAGTTAACAAAAGAAG------GA-AATTAAGTTATTTATCA----------------------------------------------------------------------ACTGAGAGCTTACACTAATATGCCCATTGTGCCACTGTGCC--------------------------------------------A-TTTCT--------------------------TCTGCTTA-TCATTTC------TATAGCTACAAGGGCAGCAAGTTCCATCGCATCATCAAGGACTTTATGATCCAGGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................CAAGGAGCTGGCTGAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2015.005300002
...............TTCAAGGAGCTGGCTGAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002200000
................TCAAGGAGCTGGCTGAGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
................TCAAGGAGCTGGCTGAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGAGAGCTTACACTAATC...............................................................................................................................................................................2011.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAGTTCCATCGCATCATCAA.................2311.001100000
........GAGGAACTTCAAGGAGCTGGCTGAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
..............CTTCAAGGAGCTGGCTGAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCGCATCATCAAGGACTTTATG.......2411.001100000
.............ACTTCAAGGAGCTGGCTGAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.AGACCGTGAGGAACTTCAAGGAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
.................CAAGGAGCTGGCTGAGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
....CCGTGAGGAACTTCAAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.............................TGAGAAGCCACAAGGCGAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...........................GCTGAGAAGCCACAAGGCGAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..............CTTCAAGGAGCTGGCTGAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTCCATCGCATCATCAA.................1911.001100000
..................AAGGAGCTGGCTGAGAAGCCACAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
..........................................................................................................................................................................TA-------------GCTGTATGCATACACACTATTTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGCAAGTTCCATCGCATCATCAAG................2711.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCATCGCATCATCAAGGACTTTATG.......2711.001100000
...............TTCAAGGAGCTGGCTGAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
..GACCGTGAGGAACTTCAAGGAGCTGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
..............................GAGAAGCCACAAGGCGAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..............CTTCAAGGAGCTGGCTGAGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
................TCAAGGAGCTGGCTGAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
.........................................................................................................................................................................................................................GTATGTGTGTGTGTGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................17200.051000100
droVir3
AAGACCGTGAAGAACTTCAAGGAGCTGGCCGAGAAGCCGCAAGGCGAGGGGTAAGCAA---------AAAA------AACAAAACGAAGCGCCGTTA--ATTGGCCCAGCAATACG--CACACACACGCACAC--GTA------------TGCAGTT--------AGCTGTA-------------AGTGTGTA----CACACTACTCG------CAT------------------------------GTA----TTTATAGGTTAGA---ACGGGAGT---------------AGT-TC-A-TATCAATTACGTGGCGTT-TAAC-T---GAGAATTAGTTGACAAAAGCGACTAATCCA-AATTGAACTGTTTACCA----------------------------------------------------------------------ACTGCT--GTGACACTAATTTGCCCATTGTGT----TTGCT--------------------------------------------TGCTTCTTCTACTTCTATCCGAATC------------------TGTTTA------TATAGCTACAAGGGCAGCAAGTTCCATCGCATCATCAAGGACTTTATGATCCAGGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............CTTCAAGGAGCTGGCCGAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002001000000000000000000000000000001000000000000000000000000000000
...........GAACTTCAAGGAGCTGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002000000020000000000000000000000000000000000000000000000000000000
........GAAGAACTTCAAGGAGCTGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002001000000000000000000000000000000000000000000000000000000000010
......GTGAAGAACTTCAAGGAGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002100000010000000000000000000000000000000000000000000000000000000
............AACTTCAAGGAGCTGGCCGAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000100000000000000000000000000
.................CAAGGAGCTGGCCGAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
.......................GCTGGCCGAGAAGCCGCAAGGCGAGGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................CCA----------------------------------------------------------------------ACTGCT--GTGACACTAATTTGC............................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCATCGCATCATCAAGGA..............2111.001000000000000000000000000000000010000000000000000000000000000000
...................AGGAGCTGGCCGAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................CGACTAATCCA-AATTGAACTGTT..............................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000010000
..............CTTCAAGGAGCTGGCCGAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
..............................GAGAAGCCGCAAGGCGAGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTA------TATAGCTACAAGGGCAGCAAG..................................2511.001000000000000000000000000000000000000001000000000000000000000000
.............ACTTCAAGGAGCTGGCCGAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
..............CTTCAAGGAGCTGGCCGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000100000000000000000000000000000000000000000000000
.AGACCGTGAAGAACTTCAAGGAGCTGGCCGAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3311.001000000000000000000000000000000000000000000000000000000000100000
..........AGAACTTCAAGGAGCTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAGTTCCATCGCATCATCAA.................2311.001000000000000000000000000000000001000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCATCGCATCATCAAG................1911.001000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACAAGGGCAGCAAGTTCCATCG..........................2511.001000000000000000000000000000000010000000000000000000000000000000
...............TTCAAGGAGCTGGCCGAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
.................CAAGGAGCTGGCCGAGAAGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000010000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACAAGGGCAGCAAGTTCCAT............................2211.001000000000000000000000000000000000000000000000000000000000001000
........GAAGAACTTCAAGGAGCTGGCCGAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000100000000000000000000000000000000000000000000000000000
.AGACCGTGAAGAACTTCAAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAGTTCCATCGCATCATCA..................2211.001000000000000000000000000000000000000010000000000000000000000000
.......................GCTGGCCGAGAAGCCGCAAGGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.....CGTGAAGAACTTCAAGGAGCTGGCCGAGAAGCCGCAAGGCGAGGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................4611.001000000000000000000000000000000000000000000000000000000000100000
.............................CGAGAAGCCGCAAGGCGAGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGCAAGTTCCATCGCA........................1911.001001000000000000000000000000000000000000000000000000000000000000
...............TTCAAGGAGCTGGCCGAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000100000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAAGTTCCATCGCATCATCAA.................2511.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGCAAGTTCCATCGCATCATCAAG................2711.001000000000000000000000000000000000000100000000000000000000000000
..........AGAACTTCAAGGAGCTGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATCGCATCATCAAGGAC.............1911.001000000000000000000000000000000001000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAGTTCCATCGCATCATCAAGGAC.............2711.001010000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................TGCAGTT--------AGCTGTA-------------AGTGTGTA----..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................CCA-AATTGAACTGTTTACCA----------------------------------------------------------------------AC.................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAAGGGCAGCAAGTTCCATC...........................2211.001000000000000000000000100000000000000000000000000000000000000000
..........AGAACTTCAAGGAGCTGGCCGAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGGCAGCAAGTTCCATC...........................2011.001000000000000000000000000000000000000000000000000000000000000001
.............................................................................................................................................................................................................TCG------CAT------------------------------GTA----TTTATAGGTTAGA---AC...................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000100000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----TTGCT--------------------------------------------TGCTTCTTCTACTTCTATC...........................................................................................2511.001000000000000000000000000000000000000000000010000000000000000000
..GACCGTGAAGAACTTCAAGGAGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000010000000000000000000000000000000000000000000000000000000
......GTGAAGAACTTCAAGGAGCTGGCCGAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCGCATCATCAAGGACTTTATGATCA...2811.001000000000000000000000000000001000000000000000000000000000000000
droGri2
AAGACTGTGAGGAACTTCAAGGAATTGGCTGAGAAACCACAGGGCGAGGGGTAAGTGT---------TAATAACCCTTATTC--------ACCGTTA--ATTGGCC------TACA--CACACACTCA-----GCTACAACATACACGTAG------------------------------------------------------------------------------------------------ACA----TTTATAGGTTAGA---GCCGGAGT---------------AGTTG--C-TATCAATTACGTGGCGTT-TAAG-T---GAGAATTAGTTAACAAAGCGAC-----GAG---C-------------------AAC---GAGCA-GAAATATTGTGTGACAAATTGATATGTTTACG---------------------TCTGAT--TTGAATCTAATTTGACAATTGT----------------------------------------------------------------TAATTCT-----ACTCTGTTTA-T-------TTACACCTATGTAAAAATAGCTACAAGGGCAGCAAGTTCCATCGCATTATCAAGGACTTTATGATCCAGGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGGCAGCAAGTTCCATCGC.........................2211.00110
...ACTGTGAGGAACTTCAAGGAATTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGGCAGCAAGTTCCATCGCAT.......................2411.00110
......GTGAGGAACTTCAAGGAATTGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101
.............ACTTCAAGGAATTGGCTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
.......TGAGGAACTTCAAGGAATTGGCTGAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGGGCAGCAAGTTCCATC...........................2111.00101
droWil2
AAGACGGTGAGGAACTTCAAGGAGTTGGCCGAGAAGCCTCAAGGAGAGGGGTAAGTGA---------AATA------GATTA--------AC------------------CGTGCAATTGAATACAATTGCA------------------ATGAGTGCGAAAGAGAG--GCGGCTAGACCA------------------------------------------------------------------AGA----TTTATAGGTTAGATAATTCAAGAC---------------GCT-TCAATAATAAACTACGTGGCCTT-TTGC-TATGGGAAATTGTTTAACAAAAGCAA------CA-AATTAA--------------------------------------------------TGTAAATTCGTTTGTGCAAATTCAATTAAAG-----------------------------------------TGTTTACTAATTTATTTATTCCCTGTTGCTGTTTTGCTCTTTTC---------------------------------TT--------TGTGTG------TCTAGTTACAAGGGCAGCAAGTTCCATCGCATCATCAAGGACTTTATGATCCAGGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................CGAGAAGCCTCAAGGAGAGGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22110.0010001000
........GAGGAACTTCAAGGAGTTGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2116.00602400
..............................GAGAAGCCTCAAGGAGAGGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2116.00600600
..GACGGTGAGGAACTTCAAGGAGTTGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2716.00600600
.......................GTTGGCCGAGAAGCCTCAAGGAGAGGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2814.00400400
.................CAAGGAGTTGGCCGAGAAGCCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2214.00400220
....CGGTGAGGAACTTCAAGGAGTTGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.00301200
.AGACGGTGAGGAACTTCAAGGAGTTGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.00300300
...............TTCAAGGAGTTGGCCGAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.00300210
.......TGAGGAACTTCAAGGAGTTGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200200
..............CTTCAAGGAGTTGGCCGAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00201010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGACTTTATGATCCAGG1812.00211000
................TCAAGGAGTTGGCCGAGAAGCCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00201010
.....GGTGAGGAACTTCAAGGAGTTGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00201100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACAAGGGCAGCAAGTTCCATCGC.........................2512.00200110
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCATCATCAAGGACT............1812.00220000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGTTCCATCGCATCATCAAG................2311.00101000
......GTGAGGAACTTCAAGGAGTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCGCATCATCAAGGACTTTATG.......2411.00110000
AAGACGGTGAGGAACTTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
..........GGAACTTCAAGGAGTTGGCCGAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
................TCAAGGAGTTGGCCGAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAAGGGCAGCAAGTTCCATCGCATC......................2711.00100100
........GAGGAACTTCAAGGAGTTGGCCGAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
...............TTCAAGGAGTTGGCCGAGAAGCCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
................................................................................................................................TGCA------------------ATGAGTGCGAAAGAGAG--GC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
..GACGGTGAGGAACTTCAAGGAGTTGGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCCCTGTTGCTGTTTTGCTCTTTT...............................................................................................................2711.00100010
....CGGTGAGGAACTTCAAGGAGTTGGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
...................AGGAGTTGGCCGAGAAGCCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.........................TGGCCGAGAAGCCTCAAGGAGAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATCGCATCATCAAGGACTT...........2111.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCATCATCAAGGACTTTATG.......2111.00101000
..............CTTCAAGGAGTTGGCCGAGAAGCCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCAAGGACTTTATGATCCA..2211.00101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGGCAGCAAGTTCCATCGC.........................2111.00100100
...............TTCAAGGAGTTGGCCGAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
.................CAAGGAGTTGGCCGAGAAGCCTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
.....GGTGAGGAACTTCAAGGAGTTGGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
...........................GCCGAGAAGCCTCAAGGAGAGGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
........GAGGAACTTCAAGGAGTTGGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
..............CTTCAAGGAGTTGGCCGAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
.......TGAGGAACTTCAAGGAGTTGGCCGAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCATCATCAAGGACTTTATGATCC...2711.00110000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAAATTCAATTAAAG-----------------------------------------TGT.......................................................................................................................................................2111.00100001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTAATTTATTTATTCCCTGTTGCTG...........................................................................................................................2711.00110000
................................................................................................................................................................................................................................................................TATAGGTTAGATAATTCAAGAC---------------GCT-T.........................................................................................................................................................................................................................................................................................................................................................2611.00100100
..............CTTCAAGGAGTTGGCCGAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
.AGACGGTGAGGAACTTCAAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.............................CGAGAAGCCTCAAGGAGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
...........GAACTTCAAGGAGTTGGCCGAGAAGCCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000
...............TTCAAGGAGTTGGCCGAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
........GAGGAACTTCAAGGAGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
dp5
AAGACCGTGAAGAACTTCAAGGAGCTGGCGGAGAAGCCACAGGGCGAGGGGTGAGTTCTTGAGATGTGCTT------GATTA--------AC------------------GGTACA--CGCACACTAGCACAC------------------------------------------------------------------------------------------------------------------ACA----TTTATAGGTTAG-----CC---------GTAGGAAAGTCAGTT-----TAGCAATTACGTGGCGTT-TCAGAC---GTCAATCAGTTGACAAAGAAAATCTCTACG-AACTAAATTGTTTATCTGCCTTAAT---GAGACAACAAT-----------------------------------------------------------------------------------------G---------TCTGTGTT------------------------------------------------------------------TTGCACCCA------CACAGCTACAAGGGAAGCAAGTTCCACCGCATCATCAAGGACTTTATGATCCAGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......GTGAAGAACTTCAAGGAGCTGGCGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2617.0070100000105
........GAAGAACTTCAAGGAGCTGGCGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2314.0040000000022
......GTGAAGAACTTCAAGGAGCTGGCGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000021
.......TGAAGAACTTCAAGGAGCTGGCGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000120
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCAAGTTCCACCGCATCATC...................2312.0020200000000
......GTGAAGAACTTCAAGGAGCTGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000002
........GAAGAACTTCAAGGAGCTGGCGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000110
.......TGAAGAACTTCAAGGAGCTGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020100000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAGCAAGTTCCACCGCATCATCAAG................2712.0020200000000
.......TGAAGAACTTCAAGGAGCTGGCGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000200
.............................GGAGAAGCCACAGGGCGAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAAGGGAAGCAAGTTCCACCGCA........................2511.0010010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAGCAAGTTCCACCGCATCATCAAGGA..............2911.0010100000000
.AGACCGTGAAGAACTTCAAGGAGCTGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAAGGGAAGCAAGTTCCACCGC.........................2411.0010000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCACCGCATCATCAAGGACTTT..........2411.0010100000000
.................CAAGGAGCTGGCGGAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..............................................................................................................................................................................................................................................................................................GAAAGTCAGTT-----TAGCAATTACGTGGC......................................................................................................................................................................................................................................................................................................................................2611.0010010000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCACCGCATCATCAAG................1911.0010100000000
..GACCGTGAAGAACTTCAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
............................CGGAGAAGCCACAGGGCGAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCACCGCATCATCAAGGACTTTATGAT.....2811.0010100000000
.......TGAAGAACTTCAAGGAGCTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGCATCATCAAGGACTTT..........2111.0010100000000
.......................GCTGGCGGAGAAGCCACAGGGCGAGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGAAGCAAGTTCCACCGC.........................2011.0010100000000
................TCAAGGAGCTGGCGGAGAAGCCACAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACAAGGGAAGCAAGTT................................1911.0010100000000
..........AGAACTTCAAGGAGCTGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCAAGTTCCACCGCAT.......................1911.0010100000000
.............ACTTCAAGGAGCTGGCGGAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.....CGTGAAGAACTTCAAGGAGCTGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000001
..GACCGTGAAGAACTTCAAGGAGCTGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000001
...............TTCAAGGAGCTGGCGGAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATCAAGGACTTTATGATCC...2211.0010100000000
droPer2
AAGACCGTGAAGAACTTCAAGGAGCTGGCGGAGAAGCCACAGGGCGAGGGGTGAGTTCTTGAGATGTGCTT------GATTA--------AC------------------GGTACA--CGCACACTAGCACAC------------------------------------------------------------------------------------------------------------------ACA----TTTATAGGTTAG-----CC---------GTAGGAAAGTCAGTT-----TAGCAATTACGTGGCGTT-CCAGAC---GTCAATCAGTTGACAAAGAAAATCTCTACG-AACTAAATTGTTTATCTGCCTTAAT---GAGACAACAAT-----------------------------------------------------------------------------------------G---------TCTGTGTT------------------------------------------------------------------TTGCACCCA------CCCAGCTACAAGGGAAGCAAGTTCCACCGCATCATCAAGGACTTTATGATCCAGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........GAAGAACTTCAAGGAGCTGGCGGAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.002200000
.......TGAAGAACTTCAAGGAGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000002
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCATCATCAAGGACTTTATG.......2111.001100000
........GAAGAACTTCAAGGAGCTGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACCGCATCATCAAGGACTTTATG.......2511.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAAGGACTTTATGAC.....1811.001100000
............AACTTCAAGGAGCTGGCGGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAAGGACTTTATGAT.....1811.001100000
........................CTGGCGGAGAAGCCACAGGGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
droAna3
AAGACCGTGAGGAACTTCAAGGAGCTGGCGGAGAAGCCCCAGGGCGAAGGGTAAGCT-----GGGGGTCTT------GATTA--------AC------------------GGCAAA--CCCACACTATCTCCGACTAGAAC---------------------------------------GATAGTC-----------------------TATATATGTATGTG----------------------------------T-GGG--GA---GCCAGGGG---------------TCT-TC---AAGCAATTACGTGGCGTT-TGAG-A---GGCAATCAGTTGACAAAGCAAATCTCTGAG---C-------------------AAT---GGGATAACAAT-----------------------------------------------------------------------------------------G---------GT--------------------------------TCT----TTCTTTTCTATTCT--TCTATTTAT---TGCGC-TTCAACCA------CTCAGCTACAAGGGTAGCAAGTTCCACCGCATCATCAAGGACTTCATGATCCAGGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTAGCAAGTTCCACCGCATCATC...................2411.001100000
.......................GCTGGCGGAGAAGCCCCAGGGCGAAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCACCGCATCATCAAGGACTTCATGATC....2911.001100000
..............CTTCAAGGAGCTGGCGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
...........GAACTTCAAGGAGCTGGCGGAGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCACCGCATCATCAAGGACTTCATGA......2811.001010000
.............ACTTCAAGGAGCTGGCGGAGAAGCCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
.........................TGGCGGAGAAGCCCCAGGGCGAAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
..GACCGTGAGGAACTTCAAGGAGCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
........................CTGGCGGAGAAGCCCCAGGGCGAAGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCATCAAGGACTTCATGATCCAGG2611.001010000
..GACCGTGAGGAACTTCAAGGAGCTGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
...............TTCAAGGAGCTGGCGGAGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...............TTCAAGGAGCTGGCGGAGAAGCCCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGGGTAGCAAGTTCCACCGC.........................2311.001010000
...............TTCAAGGAGCTGGCGGAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
....CCGTGAGGAACTTCAAGGAGCTGGCGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
............AACTTCAAGGAGCTGGCGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..........................GGCGGAGAAGCCCCAGGGCGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGTTCCACCGCATCATCAAGGA..............2511.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAAGGGTAGCAAGTTCCACCGCA........................2511.001100000
droBip1
AAGACCGTGAGGAACTTCAAGGAGCTGGCGGAGAAGCCCCAGGGCGAAGGGTAAGTT-----GCGGTTCTT------GATTA--------AC------------------GGCAAA--CCTACACTAGCGCAGACTAGAAC---------------------------------------GATAGGCTATATA----CATAATA---------------------------CATTC------------TA----TGTATGGGG--GA---GCCAGGGG---------------TCT-TC---AAGCAATTACGTGGCGTT-TGAG-A---AGCAATCAGTTGACAAAGCAAATCTCAGAG---C-------------------AAT---GGGATAACAAT-----------------------------------------------------------------------------------------G---------CC--------------------------------TTT----TTCTTTTCTATTCT--TCTATTTAT---TGCGC-TTCAACCA------TATAGCTACAAGGGTAGCAAGTTCCACCGCATCATCAAGGACTTCATGATCCAGGSizeHit CountTotal NormTotal
No Reads
droKik1
AAGACCGTGAGGAACTTCAAGGAGCTGGCCGAGAAGCCCCAGGGCGAGGGGTAAGTAC---------GCTT------GATTA--------AC------------------GGCACA--CGTACACCAGTGCCG------------------------------------------------------------------------------------------------------------------AGA-----TTGTAGGTTATA---GCGCGGCTCGCCG-A------------G--CGAAGCCATTACGTGGCTCTATGGC-G---GGTTATCTGGGGACTTTGCAAAGCGGGGAAAATGGAAAC--------------AATTAAGCGACAACGAG-----------------------------------------------------------------------------------------T------------GTT------------------------------------------------------------CTCTGCTTC-TGTGATT------CGCAGCTACAAGGGCAGCAAGTTCCACCGCATCATCAAGGACTTCATGATCCAGGSizeHit CountTotal NormTotal
No Reads
droFic1
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTG------TGCAGCTACAAGGGCAGCAAGTTCCACCGCATCATCAAGGACTTCATGATCCAGGSizeHit CountTotal NormTotal
No Reads
droEle1
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTT------TGCAGCTACAAGGGCAGCAAGTTCCACCGCATCATCAAGGACTTCATGATCCAGGSizeHit CountTotal NormTotal
No Reads
droRho1
TA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATGT----------------------------------------------------------------------TTTCCA------TGCAGCTACAAGGGCAGCAAGTTCCACCGCATCATCAAGGACTTCATGATCCAGGSizeHit CountTotal NormTotal
No Reads
droBia1
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTT------CGCAGCTACAAGGGCAGCAAGTTCCACCGCATCATCAAGGACTTCATGATCCAGGSizeHit CountTotal NormTotal
No Reads
droTak1
TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTCCCC------CGCAGCTACAAGGGCAGCAAGTTCCACCGCATCATCAAGGACTTCATGATCCAGGSizeHit CountTotal NormTotal
No Reads
droEug1
AT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTA------TGCAGCTACAAGGGCAGCAAATTCCACCGTATCATTAAGGACTTCATGATCCAGGSizeHit CountTotal NormTotal
No Reads
dm3
ACTGTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATT---GCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACATTA-TTTTGTC------AGGTACTACAATGGACACATATTCCATCGCGTGATCAAGGGCTTCATGGTGCAGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGATCAAGGGCTTCATGGTG....2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCATCGCGTGATCAAGGGCTTCATG.......2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACATATTCCATCGCGTGATCAAGGGCT............2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCATCGCGTGATCAAGGGC.............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCGCGTGATCAAGGGCTTC..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCGTGATCAAGGGCTTCATGGTGC...2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCATCGCGTGATCAAGGGC.............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCGTGATCAAGGGCTTC..........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCGTGATCAAGGGCTTCATGGTG....2511.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCATCGCGTGATCAAGGGCTTCAT........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATATTCCATCGCGTGATCA..................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCGTGATCAAGGGCTTCATGGTGCAGA2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACACATATTCCATCGCGTG......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACATATTCCATCGCGTGATCAAGG...............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTC------AGGTACTACAATGGA........................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACATATTCCATCGCGTGATCAAGGG..............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCAGCTACAAGGGCAGCAAGTTCCACCGCATCATCAAGGACTTCATGATCCAGGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCACCGCATCATCAAGGACTTCATGA......2713.00300000021000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCATCATCAAGGACTTCATG.......2112.00202000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAGTTCCACCGCATCATCAAGGAC.............2712.00200000002000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTTCCACCGCATCATCAAGGAC.............2411.00110000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTTCCACCGCATCATCAAGGACT............2511.00100000001000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGCATCATCAAGGACTTCATG.......2411.00101000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAAGGGCAGCAAGTTCCACCGCA........................2511.00100000000000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCAAGGACTTCATGA......1811.00100000001000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACCGCATCATCAAGGACTTCATGA......2611.00100000001000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCACCGCATCATCAAGGAC.............2211.00110000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATCAAGGACTTCATGATCC...2211.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGCATCATCAAGGACT............1811.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCACCGCATCATCAAGGACTTCATGATC....2911.00100000010000000000
droSec2
CT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCT-TACACCC------CGCAGCTACAAGGGCAGCAAGTTCCACCGCATCATCAAGGACTTCATGATCCAGGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATCAAGGACTTCATG.......1811.0010010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAAGGGCAGCAAGTTCCACCGC.........................2411.0010010
droYak3
ACTGTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATT---GTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACATAT-TGCTATT------AGGTACTACAATGGCCACATATTCCATCGCGTGATCAAGGGCTTCATGGTGCAGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
TACACGATAGAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAACATATGTATGTATGTATTTATTTTTGTATATAAGTGGATATAATTAATGGATAT-----AT---------GTAGC---------------AGCAAATCACATTGTGTT-CA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTC-------------------------------------------GTAATA------CATGGTTGTAAAAAAG-------------------AAGAGACTAAATCTTCTCATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................................................................................................................................................................................................................TAATTAATGGATAT-----AT---------GTAGC---------------.....................................................................................................................................................................................................................................................................................................................................................2111.0010000100
......................................................................................................................................................................................................................TATGTATGTATGTATTTATTT........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010000

Generated: 05/17/2015 at 11:27 PM