ID:

dmo_924

 Coordinate:

scaffold_6496:2057575-2057833 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dmoj_GLEANR_4787:1]; CDS [Dmoj\GI19887-cds]; exon [dmoj_GLEANR_4787:2]; CDS [Dmoj\GI19887-cds]; intron [Dmoj\GI19887-in]

Repeatable elements

NameClassFamilyStrand
CT-richLow_complexityLow_complexity+
mature
  1. scaffold_6308:770271-770296 +
  2. scaffold_6328:3726432-3726457 +
  3. scaffold_6473:5893415-5893440 +
  4. scaffold_6473:11714555-11714580 +
  5. scaffold_6473:11714683-11714708 +
  6. scaffold_6473:11714817-11714842 +
  7. dmo_924  scaffold_6496:2057630-2057655 +
  8. scaffold_6496:4619557-4619582 +
  9. scaffold_6496:6029537-6029562 +
  10. scaffold_6496:6327425-6327450 +
  11. scaffold_6496:6654662-6654687 +
  12. scaffold_6496:13585521-13585546 +
  13. scaffold_6500:1876776-1876801 +
  14. scaffold_6500:8935283-8935308 +
  15. scaffold_6500:14754634-14754659 +
  16. scaffold_6500:19243338-19243363 +
  17. scaffold_6500:19909307-19909332 +
  18. scaffold_6500:23932955-23932980 +
  19. scaffold_6500:24897124-24897149 +
  20. scaffold_6680:20627502-20627527 +
star
  1. scaffold_6328:3598539-3598562 -
  2. scaffold_6328:3816709-3816732 -
  3. scaffold_6340:36470-36493 +
  4. scaffold_6473:2085118-2085141 +
  5. scaffold_6473:5893757-5893780 +
  6. scaffold_6473:7481180-7481203 +
  7. scaffold_6473:11646688-11646711 +
  8. dmo_924  scaffold_6496:2057762-2057785 +
  9. scaffold_6496:11215297-11215320 +
  10. scaffold_6500:1344874-1344897 +
  11. scaffold_6500:3574479-3574502 +
  12. scaffold_6500:3982560-3982583 +
  13. scaffold_6500:9065608-9065631 -
  14. scaffold_6500:24707896-24707919 -
  15. scaffold_6500:28812540-28812563 +
  16. scaffold_6540:16368508-16368531 +
  17. dmo_1998  scaffold_6540:20213611-20213634 +
  18. scaffold_6540:27526078-27526101 +
  19. scaffold_6680:4146155-4146178 +
  20. scaffold_6680:10199375-10199398 +

Sense Strand Reads

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TGGATGCATCGTCACCTGCCCTTCAAATACGATATGCCCTTTCGCATGATGTAGGTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTTTGTATCTCTGTATCTTTCATCTCTCTCTTGCTTTCTTCTTCCTCCTAGCTTTCCAGCTATATTTCATCGCATGCCCCTCTATCCTCTCGCCTATCTCT
*********************************************************************************************************.....((((..((((..((((..((((..((((..((((..((((..((((..((((..((((..((((..((((........))))..))))..))))..))))..))))..))))..))))..))))..))))..))))..))))..))))...************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
.........................................................................................................TATCTGTATCTGTATCTGTATCTGTA.................................................................................................................................................................................................................................... 26 0 20 0.05 1 1 0
.............................................................................................................................................................................................................................................TATCTGTATCTGTATCTGTATCTT.................................................................................................. 24 0 20 0.05 1 1 0
..................................................................................................................CTGTATCTGTATCTGTATCTGTA.............................................................................................................................................................................................................................. 23 0 20 0.05 1 0 1
........................................................................................................................................................................................................................................................................................TCTCTCTCTTGCTTTCGTC............................................................ 19 1 20 0.05 1 0 1

Anti-sense strand reads

ACCTACGTAGCAGTGGACGGGAAGTTTATGCTATACGGGAAAGCGTACTACATCCACATAGACATAGACATAGACATAGACATAGACATAGACATAGACATAGACATAGACATAGACATAGACATAGACATAGACATAGACATAGACATAGACATAGACATAGACATAGACATAGACATAGACATAGACATAGACATAGACATAGACATAGACATAGACATAGACATAGACATAGACATAGACATAGACATAGACATAGAAACATAGAGACATAGAAAGTAGAGAGAGAACGAAAGAAGAAGGAGGATCGAAAGGTCGATATAAAGTAGCGTACGGGGAGATAGGAGAGCGGATAGAGA
**************************************************************************************************.....((((..((((..((((..((((..((((..((((..((((..((((..((((..((((..((((..((((........))))..))))..))))..))))..))))..))))..))))..))))..))))..))))..))))..))))...********************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V110
male body		 M046
female body
.........................................................................................................................................................................................................................................................................................................................................CGAACGGGGAGATAGGAGAC.......... 20 2 1 1.00 1 1 0
...........................................CGTACTACATCCACATAAG......................................................................................................................................................................................................................................................................................................... 19 2 3 0.33 1 0 1
.................................................................................................................................................ACATAGACATAGACATAGACATAG.............................................................................................................................................................................................. 24 0 20 0.20 4 0 4
.................................................................................................ACATAGACATAGACATAG.................................................................................................................................................................................................................................................... 18 0 20 0.15 3 0 3
....................................................CCCACATAGACATAGACATAG.............................................................................................................................................................................................................................................................................................. 21 1 14 0.07 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6496:2057525-2057883 + dmo_924 TG-----------GATGCATCGTCACCTGCCCTTCAAATACGATATGCCCTTTCGCATGA------------------------TGTAGGTGTATCTGTATCTGTATCTGTATCTGTA--------TCT------GTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT--ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT------------------------ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTAT------CTTT------------GTATC----TCTGTAT------CT--------------------------------------------------------------------------------------------------------TTCATCTCTCTCTTGCTTTCTTCTTCCTCCTAGCTTTCCAGCTATATTTCATCGCATGCCCCTCTATCCTCTC------------------------------------------GCCTA------------------T----------CTCT--
droVir3 scaffold_12855:4089284-4089592 - TG-----------T-------------------------------------------------AT------------------CTGTATCTGTATCTGTATCTGTATCTGTATCTGTA--------TCT------GTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT--ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT------------------------ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTAT------CTGTATCT--------GTATCTGTATCTGTAT------CTG------TATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTA-----TCT----------------------------------------------------GT----------------------------------------------------------------------------------A----TCTGTATCTG------T----ATT--TCTA------------------T----------CTCT--
droGri2 scaffold_15110:4961944-4962240 - TG-----------T-------------------------------------------------AT------------------CTGTATCTGTATCTGTATCTGTATCTGTATCTGTA--------TCT------GTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT--ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT------------------------ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTAT------CTGTATCT--------GTATCTGTATCTGTAT------GTG------TATCTGTATCTGTATCTATATTT---------------ATACATCT----------------------------------------------------GCA----------------------------------------------------------------------------TCTATA----TCTTT--------------------GTCTA------------------T----------ATCT--
droWil2 scf2_1100000001438:549-824 - TG-----------T-------------------------------------------------AT------------------TTGTATTTGTATTTGTATTTGTATTTGTATTTGTA--------TTT------GTATTTGTATTTGTATTTGTATTTGTATTTGTATTTGTATTTGTATTTGT--ATTTGTATTTGTATTTGTATTTGTATTTGTATTTGTATTTGT------------------------ATTTGTATTTGTATTTGTATTTGTATTTGTATTTGTATTTGTATTTGTATTTGTATTTGTATTTGTATTTGTATTTGTAT------TTGTATTT--------GTATTTGTATTTGTAT------TTG------TATTTGTATTTGTATTTG-A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT------GT----------A----TTTG------------------T----------ATTT--
dp5 XR_group6:12986252-12986544 - TA-----------T-------------------------------------------------CC------------------AACTATCTATCTATATCTATCTATCTATTTCTTTA--------TAT------CTATCTATCTATATCTGTCTATCTATCTATCTACCTAACTGTCTATCTTA--ATCTATTTATATCTACCTATCCATCTATCTATCTATAT----------------------------ATCTATATCTATCTATCAATCTGTATCGATCTATCTATATATCTAAATATATCTATCTATCTTCATCTATCTATATCTAC------CTATCCAT--------CTATCTATCTATAACTATCTATCCA------TCTATCTAACCATC------GCT---------------CCATCTAT----------------------------------------------------CTA----------------------------------------------------------------------------TCTATA----T--------------------CCTCGTACA------------------T----------CTTT--
droPer2 scaffold_29:103604-103920 + TA-----------T-------------------------------------------------CT------------------ATCTATCTTTCATTCTTTCTATCTTTCTATCTATCCATATGTATATCTATCATTCTATGTATCTATCTATCTCTTTATCTCTCTACCTATCTATCTATCCATCTATCTATTTATCTATCTATCTATTTATCTATCTATCTATCTAT------------------------CTATCTATATATATATCTATCTATATATGTATCTGT------------CTATCTATCTATCTTTCTATCTATATATCTAT------CCATCTAT--------CTATTTATC------TATCTATCGA------TCTTTCTATCTATCCATCCATCT---------------------AT----------------------------------------------------C----------------------------------------------------------AATTTATACTATCCTATCTCT----ATCTATCCATCC--------------ATC--TATC------------------A----------ATTT--
droAna3 scaffold_10580:1664-1958 - TG-----------T-------------------------------------------------CT------------------CTGTCTCTGTCGCTGTCTCTGTCTCTGTCTCTGTC--------TCT------GTCTCTGTCTCTGTCTCTGTCACTGTCTCTGTCTCTGTCTCTGTCTCTGT--CTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTGT------------------------CTCTGTGTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTCTGTCTCTCT------GTCTCTCT--------ATCTCTCTGTCTCTCT------GTC------TCTCTGTCTCTCTGTCTCTCTGT---------------CTCTCTGT----------------------------------------------------CTC----------------------------------------------------------------------------TCTGTC----T--------------------CTT--TGTC------------------T----------CTCT--
droBip1 scf7180000392070:26-334 - AT----------AT-------------------------------------------------AT------------------ATATATATATATATATATCTATATATATATATATA--------TCT------ATATCTATATCTATATCTATATCTGTATCTATATCTATATCTATATCTAT--ATCTATATCTATATCTATATCTATATCTATATCTATATCTAT------------------------ATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATAT------CTATATCT--------ATATCTATATCTATAT------CTA------TATCTATATCTATATCTATATCTATATCTATATCTATA-----TCT----------------------------------------------------AT----------------------------------------------------------------------------------A----TCTATATCTA------T----A---GTCTA------------------T----------ATCT--
droKik1 scf7180000302544:989439-989725 - TG-----------C-------------------------------------------------AG------------------GTGTATCTGTATCTGTATCTGTATCTGTATCTGTA--------TCT------GTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT--ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT------------------------ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTTTCTGCTATTGTATCTGTATCTGCT--ATTGTATCTGTATCTGTA------------------------TCTGTTTTTGCAT-TATT---------------------------TTTATGTT---------------------------------TT----------------------------------------AG----------------------------------------------------------------------------GTA------------------T----------ATTT--
droFic1 scf7180000453927:1449876-1450212 + CG-----------CAAGCTGCGT------------------------------------GAGTAT------------------CTGCATCACTATCTGTATCACTAACTATATCAATA--------TCT------GTATCACCATCTGTATCACTATCTGTGTCACCATCTGTGTCACCATCTGT--GTCACTATCTGTGTCACCATCTGTATTTCTATCTGCATCACTATCTATATCTGAATCTACTAC-----CT-----------ACTATCTGTATCTAAATCACTATCTGTATCACTATCTCCATCAGTAAGTATATCAATATCTTTAT------CAATATCT--------GGATCCCTATCTGTAT------CA------------------CTATGATTGTCACCATCTGCATCACTA-----TCTTAATGAATTTATGTA---------------------------------TCACCCA----------------------------------------------------------------------------TCTGTA----TCCCTAT------------------GTGTA------------------T----------CACT--
droEle1 scf7180000490238:10492-10764 - TA-----------T-------------------------------------------------AT------------------CTATATCTATATCTATATCTATATCTATATCTATA--------TCT------ATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTAT--ATCTATATCTATATCTATATCTATATCTATATCTATATCTAT------------------------ATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATAT------CTATATCT--------ATATCTATATCTATAT------CTA------TATCTATATCTATATCTATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTA------------------T----------ATTTTA
droRho1 scf7180000780229:49076-49329 - TG-----------T-------------------------------------------------CC-T---------TGT----TTGTATCTGTATCTGTATCTGTATCTGTATCTGTA--------TCT------GTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT--ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT------------------------ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT----------------GTAT------------------------------CTGTGTGTGCTTGACTGTGTCTGTGTCTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGACTTTGTTTGTCCCGCCAGTCATTTGGCGGTCGTCGTCCTC--
droBia1 scf7180000302041:581049-581337 - TG-----------T-------------------------------------------------AT------------------CTGTATCTGTATCTGTATCTGTATCTGTATCTGTA--------TCT------GTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT--ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT------------------------ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTAT------CTGTG------------------------AA--------------------------CA------AAT-----------------TCCTATCT---------------TCTAGTTACTTACAAAAACTCCATCTAGGCGACTCTTT--------------------------------------------------------------------------------------------------------------TC------------------------TCTCTTTTCTT-TTT--
droTak1 scf7180000415768:3666-3950 - TA-----------T-------------------------------------------------AT------------------CTATATCTATATCTATATCTATATCTATATCTATA--------TCT------ATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTAT--ATCTATATCTATATCTATATCTATATCTATATCTATATCTAT------------------------ATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATAT------CTATATCT--------ATATCTATATCTATAT------CTA------TATCTATATCTATATCTATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TCT------ATATCTATATCTAATTTT----------------------------------AT--
droEug1 scf7180000408987:310051-310291 + TG-----------T-------------------------------------------------AT------------------CTGTATCTGTATCTGTATCTGTATCTGTATCTGTA--------TCT------GTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT--ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT------------------------ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTAT------CTGTATCT--------GTATCTGTATCTGTAT------CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chrX:21343041-21343292 - CCATTTCCCACTGT-------------------------------------------------AT------------------CTGTATCTGTATTTGTATCTGTATCTGTATCTGTA--------TCT------GTATATGTATCTGTATCTGTATCTGTATCTATATCTGTATCTGTATCTGT--ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT------------------------ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATTTGTATCTGTATCTGTATCTGTATCTGTAT------CTGTATCT--------GTATCTGTATCTGTAT------CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 x:7576127-7576438 + G------------T-------------------------------------------------ATCTGCATCTGAATATGTATCTGTATCTGCATCGGTATATGTATCTGCATCT--------------------GTATCTGTATCTGCATCTGTGTCTGCATATGTATCTGTATCTGTATCTGT--------------ATCTGTATCTGTATCTGTATCTGCATCTTT------ATCTGTATCTTCATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT------------ATCTGTATCTGTATCTGTATCTTCATCTGTAT------ATGTATCT--------GTATCTGCA------TCTATATCTGCGTTTGTATCTGTAGCTGTATCGGTATAT------GTATCTGCA-----TCT----------------------------------------------------GCA----------------------------------------------------------------------------TCTGTA----TCTGT--------------------GTCTG------------------T----------GTCT--
droSec2 scaffold_8:3655095-3655335 - TG-----------T-------------------------------------------------AT------------------CTGTATCTGTATCTGTATCTGTATCTGTATCTGTA--------TCT------GTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT--ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT------------------------ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTAT------CTGTATCT--------GTATCTGTATCTGTAT------CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 v2_chrUn_5853:2790-3104 + TA-----------T-------------------------------------------------AT------------------CTATATCTATATCTATATCTATATCTATATCTATA--------TCT------ATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTAT--ATCTATATCTATATCTATATCTATATCTATATCTATATCTAT------------------------ATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATAT------CTATATCT--------ATATCTATATCTATAT------CTA------TATCTATATCTATATCTATATCTATATCTATATCTATA-----TCT--------------------------------------------------------------------------------------------------------------------------------------ATA----TCTATATCTA------T----ATC------------------------TCTCTCTCCTTCTTA--
droEre2 scaffold_4690:11198526-11198769 - TG---------------------------------------------------------ATGTAT------------------CTGTATCTGTATCTGTATCTGTATCTGTATCTGTA--------TCT------GTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT--ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT------------------------ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTAT------CTGTATCT--------GTATCTGTATCTGTAT------CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
TG-----------GATGCATCGTCACCTGCCCTTCAAATACGATATGCCCTTTCGCATGA------------------------TGTAGGTGTATCTGTATCTGTATCTGTATCTGTA--------TCT------GTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT--ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT------------------------ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTAT------CTTT------------GTATC----TCTGTAT------CT--------------------------------------------------------------------------------------------------------TTCATCTCTCTCTTGCTTTCTTCTTCCTCCTAGCTTTCCAGCTATATTTCATCGCATGCCCCTCTATCCTCTC------------------------------------------GCCTA------------------T----------CTCT--SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................TATCTGTATCTGTATCTGTATCTGTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051100000
........................................................................................................................................................................................................................................................................................................................TATCTGTATCTGTATCTGTAT------CTT........................................................................................................................................................................................................................................................................................................24200.051100000
...................................................................................................................................................................CTGTATCTGTATCTGTATCTGT--A..................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000010
droVir3
TG-----------T-------------------------------------------------AT------------------CTGTATCTGTATCTGTATCTGTATCTGTATCTGTA--------TCT------GTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT--ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT------------------------ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTAT------CTGTATCT--------GTATCTGTATCTGTAT------CTG------TATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTA-----TCT----------------------------------------------------GT----------------------------------------------------------------------------------A----TCTGTATCTG------T----ATT--TCTA------------------T----------CTCT--SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................................................................................................................CTGTATCTGTATCTGT------------------------ATCTG............................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................................................................................CTGTATCTGTATCTGTATCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000010000000000000000000000000000000
.G-----------T-------------------------------------------------AT------------------CTGTATCTGTATCTGTATCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
droGri2
TG-----------T-------------------------------------------------AT------------------CTGTATCTGTATCTGTATCTGTATCTGTATCTGTA--------TCT------GTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT--ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT------------------------ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTAT------CTGTATCT--------GTATCTGTATCTGTAT------GTG------TATCTGTATCTGTATCTATATTT---------------ATACATCT----------------------------------------------------GCA----------------------------------------------------------------------------TCTATA----TCTTT--------------------GTCTA------------------T----------ATCT--SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
TG-----------T-------------------------------------------------AT------------------TTGTATTTGTATTTGTATTTGTATTTGTATTTGTA--------TTT------GTATTTGTATTTGTATTTGTATTTGTATTTGTATTTGTATTTGTATTTGT--ATTTGTATTTGTATTTGTATTTGTATTTGTATTTGTATTTGT------------------------ATTTGTATTTGTATTTGTATTTGTATTTGTATTTGTATTTGTATTTGTATTTGTATTTGTATTTGTATTTGTATTTGTAT------TTGTATTT--------GTATTTGTATTTGTAT------TTG------TATTTGTATTTGTATTTG-A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT------GT----------A----TTTG------------------T----------ATTT--SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................................................................................................................................TTGTATTTGTATTTGTAT------TTGTATTT--------G..........................................................................................................................................................................................................................................................................................27200.05100010
.....................................................................................................................................................................................................................................................................................................................TTGTATTTGTATTTGTATTTGTAT------TTG........................................................................................................................................................................................................................................................................................................27200.05100010
.......................................................................................................................................................................................................................................................................................................................................................................TTGTATTTGTAT------TTG------TATTTGTATT..................................................................................................................................................................................................................................................25200.05100010
.........................................................................................................................................................................................................................................................................................................................................................TT--------GTATTTGTATTTGTAT------TTG------TATT........................................................................................................................................................................................................................................................25200.05100010
..................................................................................................................................................TGTATTTGTATTTGTATTTGTATTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100010
dp5
TA-----------T-------------------------------------------------CC------------------AACTATCTATCTATATCTATCTATCTATTTCTTTA--------TAT------CTATCTATCTATATCTGTCTATCTATCTATCTACCTAACTGTCTATCTTA--ATCTATTTATATCTACCTATCCATCTATCTATCTATAT----------------------------ATCTATATCTATCTATCAATCTGTATCGATCTATCTATATATCTAAATATATCTATCTATCTTCATCTATCTATATCTAC------CTATCCAT--------CTATCTATCTATAACTATCTATCCA------TCTATCTAACCATC------GCT---------------CCATCTAT----------------------------------------------------CTA----------------------------------------------------------------------------TCTATA----T--------------------CCTCGTACA------------------T----------CTTT--SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
TA-----------T-------------------------------------------------CT------------------ATCTATCTTTCATTCTTTCTATCTTTCTATCTATCCATATGTATATCTATCATTCTATGTATCTATCTATCTCTTTATCTCTCTACCTATCTATCTATCCATCTATCTATTTATCTATCTATCTATTTATCTATCTATCTATCTAT------------------------CTATCTATATATATATCTATCTATATATGTATCTGT------------CTATCTATCTATCTTTCTATCTATATATCTAT------CCATCTAT--------CTATTTATC------TATCTATCGA------TCTTTCTATCTATCCATCCATCT---------------------AT----------------------------------------------------C----------------------------------------------------------AATTTATACTATCCTATCTCT----ATCTATCCATCC--------------ATC--TATC------------------A----------ATTT--SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
TG-----------T-------------------------------------------------CT------------------CTGTCTCTGTCGCTGTCTCTGTCTCTGTCTCTGTC--------TCT------GTCTCTGTCTCTGTCTCTGTCACTGTCTCTGTCTCTGTCTCTGTCTCTGT--CTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTGT------------------------CTCTGTGTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTCTGTCTCTCT------GTCTCTCT--------ATCTCTCTGTCTCTCT------GTC------TCTCTGTCTCTCTGTCTCTCTGT---------------CTCTCTGT----------------------------------------------------CTC----------------------------------------------------------------------------TCTGTC----T--------------------CTT--TGTC------------------T----------CTCT--SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................................................................................................................................................................................................CTCTGTGTCTGTCTCTGTCTCTG..........................................................................................................................................................................................................................................................................................................................................................................2330.331100000
......................................................................................................................................................................................................................................................................................................................................................TCTCT--------ATCTCTCTGTCTCTCT------.....................................................................................................................................................................................................................................................................2150.201100000
................................................................................................................TCTGTC--------TCT------GTCTCTGTCTCTGTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051100000
..............................................................................................................................................................................TCTGTCTCTGT--CTCTGTCTCTGTCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051100000
droBip1
AT----------AT-------------------------------------------------AT------------------ATATATATATATATATATCTATATATATATATATA--------TCT------ATATCTATATCTATATCTATATCTGTATCTATATCTATATCTATATCTAT--ATCTATATCTATATCTATATCTATATCTATATCTATATCTAT------------------------ATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATAT------CTATATCT--------ATATCTATATCTATAT------CTA------TATCTATATCTATATCTATATCTATATCTATATCTATA-----TCT----------------------------------------------------AT----------------------------------------------------------------------------------A----TCTATATCTA------T----A---GTCTA------------------T----------ATCT--SizeHit CountTotal NormTotal
No Reads
droKik1
TG-----------C-------------------------------------------------AG------------------GTGTATCTGTATCTGTATCTGTATCTGTATCTGTA--------TCT------GTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT--ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT------------------------ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTTTCTGCTATTGTATCTGTATCTGCT--ATTGTATCTGTATCTGTA------------------------TCTGTTTTTGCAT-TATT---------------------------TTTATGTT---------------------------------TT----------------------------------------AG----------------------------------------------------------------------------GTA------------------T----------ATTT--SizeHit CountTotal NormTotal
No Reads
droFic1
CG-----------CAAGCTGCGT------------------------------------GAGTAT------------------CTGCATCACTATCTGTATCACTAACTATATCAATA--------TCT------GTATCACCATCTGTATCACTATCTGTGTCACCATCTGTGTCACCATCTGT--GTCACTATCTGTGTCACCATCTGTATTTCTATCTGCATCACTATCTATATCTGAATCTACTAC-----CT-----------ACTATCTGTATCTAAATCACTATCTGTATCACTATCTCCATCAGTAAGTATATCAATATCTTTAT------CAATATCT--------GGATCCCTATCTGTAT------CA------------------CTATGATTGTCACCATCTGCATCACTA-----TCTTAATGAATTTATGTA---------------------------------TCACCCA----------------------------------------------------------------------------TCTGTA----TCCCTAT------------------GTGTA------------------T----------CACT--SizeHit CountTotal NormTotal
No Reads
droEle1
TA-----------T-------------------------------------------------AT------------------CTATATCTATATCTATATCTATATCTATATCTATA--------TCT------ATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTAT--ATCTATATCTATATCTATATCTATATCTATATCTATATCTAT------------------------ATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATAT------CTATATCT--------ATATCTATATCTATAT------CTA------TATCTATATCTATATCTATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTA------------------T----------ATTTTASizeHit CountTotal NormTotal
No Reads
droRho1
TG-----------T-------------------------------------------------CC-T---------TGT----TTGTATCTGTATCTGTATCTGTATCTGTATCTGTA--------TCT------GTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT--ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT------------------------ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT----------------GTAT------------------------------CTGTGTGTGCTTGACTGTGTCTGTGTCTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGACTTTGTTTGTCCCGCCAGTCATTTGGCGGTCGTCGTCCTC--SizeHit CountTotal NormTotal
No Reads
droBia1
TG-----------T-------------------------------------------------AT------------------CTGTATCTGTATCTGTATCTGTATCTGTATCTGTA--------TCT------GTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT--ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT------------------------ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTAT------CTGTG------------------------AA--------------------------CA------AAT-----------------TCCTATCT---------------TCTAGTTACTTACAAAAACTCCATCTAGGCGACTCTTT--------------------------------------------------------------------------------------------------------------TC------------------------TCTCTTTTCTT-TTT--SizeHit CountTotal NormTotal
No Reads
droTak1
TA-----------T-------------------------------------------------AT------------------CTATATCTATATCTATATCTATATCTATATCTATA--------TCT------ATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTAT--ATCTATATCTATATCTATATCTATATCTATATCTATATCTAT------------------------ATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATAT------CTATATCT--------ATATCTATATCTATAT------CTA------TATCTATATCTATATCTATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TCT------ATATCTATATCTAATTTT----------------------------------AT--SizeHit CountTotal NormTotal
No Reads
droEug1
TG-----------T-------------------------------------------------AT------------------CTGTATCTGTATCTGTATCTGTATCTGTATCTGTA--------TCT------GTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT--ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT------------------------ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTAT------CTGTATCT--------GTATCTGTATCTGTAT------CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
CCATTTCCCACTGT-------------------------------------------------AT------------------CTGTATCTGTATTTGTATCTGTATCTGTATCTGTA--------TCT------GTATATGTATCTGTATCTGTATCTGTATCTATATCTGTATCTGTATCTGT--ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT------------------------ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATTTGTATCTGTATCTGTATCTGTATCTGTAT------CTGTATCT--------GTATCTGTATCTGTAT------CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......CCACTGT-------------------------------------------------AT------------------CTGTATCTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................TGTA--------TCT------GTATATGTATCTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21110.1820000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................TATCTGTATCTATATCTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1980.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................ATCTGTATCTGTA--------TCT------GTATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..........................................................................................................TCTGTATCTGTA--------TCT------GTATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.......................................................................................................................................GTATATGTATCTGTATCTGTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................TCTGTATTTGTATCTGTATCTGTATCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TCTGTATTTGTATCTGTATCTGTATCT...........................................................................................................................................................................................................................................................................................................................27130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................TATGTATCTGTATCTGTATCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................TGTATCTGT------------------------ATCTGTATCTGT.....................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................TATCTGTATCTGTATCTGTA--------TC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................TGT--ATCTGTATCTGTATCTGTATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................GTATCTGTATCTGT--ATCTGTATCTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................TGTATCTGT--ATCTGTATCTGTATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TATCTGTATCTGTAT------CTGTATC....................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................TGT------------------------ATCTGTATCTGTATCTGT...............................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................TGTATCTGTATCTGTATCTGT.................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................TATCTGTATCTGTATCTGTAT------C..........................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................TGTATCTGTATCTGTATCTGT.........................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................TTTGTATCTGTATCTGTATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TATCTGTAT------CTGTATCT--------GTATC......................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TATCTGTATCTGTATCTGTATC......................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................TGTATCTGTATCTGTATCTGT...................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................TGTATCTGTATCTGTATCTGT.............................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................ATCTGTATCTGTATCTGTATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................TATCT--------GTATCTGTATCTGTAT------C....................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................TATCTGT--ATCTGTATCTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TAT------CTGTATCT--------GTATCTGTATC................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................T--ATCTGTATCTGTATCTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................TTTGTATCTGTATCTGTATCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................ATCTGTATCTGT--ATCTGTATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................TGTATCTGTATCTGTATCTGT.......................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GT-------------------------------------------------AT------------------CTGTATCTGTATTTGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
..............................................................................................................................................TATCTGTATCTGTATCTGTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..................................................................................................TATCTGTATCTGTATCTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................TTGTATCTGTATCTGTATCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TATCTGTATCTGTATCTGT.........................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................TTGTATCTGTATCTGTATCTG..........................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droSim2
G------------T-------------------------------------------------ATCTGCATCTGAATATGTATCTGTATCTGCATCGGTATATGTATCTGCATCT--------------------GTATCTGTATCTGCATCTGTGTCTGCATATGTATCTGTATCTGTATCTGT--------------ATCTGTATCTGTATCTGTATCTGCATCTTT------ATCTGTATCTTCATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT------------ATCTGTATCTGTATCTGTATCTTCATCTGTAT------ATGTATCT--------GTATCTGCA------TCTATATCTGCGTTTGTATCTGTAGCTGTATCGGTATAT------GTATCTGCA-----TCT----------------------------------------------------GCA----------------------------------------------------------------------------TCTGTA----TCTGT--------------------GTCTG------------------T----------GTCT--SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................................................................................................................................................ATCTGTATCTTCATCTGTAT------ATGT.......................................................................................................................................................................................................................................................................................................2411.00110000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TATAT------GTATCTGCA-----TCT----------------------------------------------------GCA----------------------------------------------------------------------------T..........................................................................2130.33100000000000001000
.........................................................................................................................................................................................................CTGTATCTGTATCTGTATCTGCATC............................................................................................................................................................................................................................................................................................................................................................................................................................2580.13100100000000000000
.............................................................................................................................................................................................................................................................................................CTGT------------ATCTGTATCTGTATCT.................................................................................................................................................................................................................................................................................................................................20200.10200200000000000000
...............................................................................................................................................................................................................................................................................................................CTGTATCTGTATCTGTATCT...........................................................................................................................................................................................................................................................................................................................20200.10200200000000000000
...................................................................................................................................................................................................................................................................................................................................................ATGTATCT--------GTATCTGCA------TC..........................................................................................................................................................................................................................................................................19130.08100000000001000000
.............................................................................ATGTATCTGTATCTGCATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19130.08100000000001000000
...........................................................................................................................................................................GTATCTGTATCTGT--------------ATCTGTATCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100100000000000000
.................................................................................................................................................................................GTATCTGT--------------ATCTGTATCTGTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05110000000000000000
...........................................................................................................................................................................................................................................................GTATCTGTATCTGTATCTGTATCT...........................................................................................................................................................................................................................................................................................................................................................................24200.05100100000000000000
...............................................................................................................................................................................................................................................................................ATCTGTATCTGTATCTGT------------A................................................................................................................................................................................................................................................................................................................................................19200.05100100000000000000
.....................................................................................................................................................................................................................................................................................ATCTGTATCTGT------------ATCTGTA..........................................................................................................................................................................................................................................................................................................................................19200.05100100000000000000
.................................................................................................................................................................................................................................................................GTATCTGTATCTGTATCTGTA........................................................................................................................................................................................................................................................................................................................................................................21200.05110000000000000000
........................................................................................................................................................................TCTGTATCTGTATCTGT--------------ATCTGTA................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100000010000000000
..............................................................................................................................................................................TCTGTATCTGT--------------ATCTGTATCTGTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100000010000000000
..............................................................................................................................................................................................................................................................TCTGTATCTGTATCTGTATCTGTA........................................................................................................................................................................................................................................................................................................................................................................24200.05100000010000000000
...............................................................................................................................................................................................................CTGTATCTGTATCTGCAT.............................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100100000000000000
.......................................................................................................................................................................................................ATCTGTATCTGTATCTGTA....................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100100000000000000
........................................................................................................................................................................................................................................................TCTGTATCTGTATCTGTATCT.................................................................................................................................................................................................................................................................................................................................................................................21200.05100000001000000000
.....................................................................................................................................................................GTATCTGTATCTGTATCTGT--------------ATCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100100000000000000
...........................................................................................................................................................................GTATCTGTATCTGT--------------ATCTGTA................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05110000000000000000
droSec2
TG-----------T-------------------------------------------------AT------------------CTGTATCTGTATCTGTATCTGTATCTGTATCTGTA--------TCT------GTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT--ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT------------------------ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTAT------CTGTATCT--------GTATCTGTATCTGTAT------CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
TA-----------T-------------------------------------------------AT------------------CTATATCTATATCTATATCTATATCTATATCTATA--------TCT------ATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTAT--ATCTATATCTATATCTATATCTATATCTATATCTATATCTAT------------------------ATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATAT------CTATATCT--------ATATCTATATCTATAT------CTA------TATCTATATCTATATCTATATCTATATCTATATCTATA-----TCT--------------------------------------------------------------------------------------------------------------------------------------ATA----TCTATATCTA------T----ATC------------------------TCTCTCTCCTTCTTA--SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
TG---------------------------------------------------------ATGTAT------------------CTGTATCTGTATCTGTATCTGTATCTGTATCTGTA--------TCT------GTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT--ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT------------------------ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTAT------CTGTATCT--------GTATCTGTATCTGTAT------CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/17/2015 at 11:25 PM