ID:

dmo_914

 Coordinate:

scaffold_6496:931992-932142 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.8 -14.8 -14.6

Flybase annnotation

exon [dmoj_GLEANR_4716:10]; CDS [Dmoj\GI19809-cds]; intron [Dmoj\GI19809-in]

Repeatable elements

NameClassFamilyStrand
(CAG)nSimple_repeatSimple_repeat+
Gypsy8-I_Dpse-intLTRGypsy+
mature
star
  1. scaffold_6359:3145523-3145541 +
  2. scaffold_6473:7480670-7480688 +
  3. dmo_914  scaffold_6496:932122-932140 +
  4. scaffold_6496:2164116-2164134 +
  5. scaffold_6496:21267907-21267925 +
  6. scaffold_6500:17146130-17146148 +
  7. scaffold_6500:28239837-28239855 +
  8. scaffold_6540:11034962-11034980 +
  9. scaffold_6540:29027797-29027815 +
  10. scaffold_6540:30469397-30469415 +
  11. scaffold_6654:2387193-2387211 +
  12. scaffold_6680:2225812-2225830 +
  13. scaffold_6680:2565880-2565898 +
  14. scaffold_6680:6634968-6634986 +
  15. scaffold_6680:6898075-6898093 +
  16. scaffold_6680:8167922-8167940 +
  17. scaffold_6680:8855839-8855857 +
  18. scaffold_6680:13660871-13660889 +
  19. scaffold_6680:14987474-14987492 +
  20. scaffold_6680:19315463-19315481 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATTATTAATAATTATAGATTAAATAATTGAATTGATACTAACAGCAGCAGCACTGCTAACAACAGCAACATGAATCAATTTTTGACTTAAGTTGAGAGTCTTCTACGATCAGCACACAGTTTTCTATTTTCTATTATTCCTAAGTTAATTTTCATTTATTGCTTATGATTTAAGTTGCAACAGCAACAGCAACAACAACAGCCGCCGCAGCAGCAGCAGCAATTGCCGCTGCAGCACAGCAACAGCAACAG
***************************************************************************........((((...(((((..((.....))..)))))....))))................((.(((((.(((........)))))))).)).....(((((....)))))............**************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 M060
embryo
 V049
head
 V056
head
.............ATAGATTTAATAATTGCATT.......................................................................................................................................................................................................................... 20 2 13 1.77 23 16 6 0 1 0
...............................................................................TTTTGACTTAGGTTGAGA.......................................................................................................................................................... 18 1 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................AACAGCAACAACAACAGCCGCCGCAGCA....................................... 28 0 1 1.00 1 1 0 0 0 0
...........................................................................CAATTTTTGACTTAAGTTGAG........................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................ACAACAGCCGCCGCAGCA....................................... 18 0 3 0.33 1 1 0 0 0 0
...................................................................................................................................................................................ACAGCAACAGCAACAACAACAGCCGC.............................................. 26 0 4 0.25 1 0 0 1 0 0
....................................................................................................................................................................................................AACAGCCGCCGCAGCAGCAGCA................................. 22 0 4 0.25 1 1 0 0 0 0
.................................................................................TAGACATAAGTTGAGAGT........................................................................................................................................................ 18 2 13 0.08 1 1 0 0 0 0
..............TAGATTTAATAATTGCATT.......................................................................................................................................................................................................................... 19 2 20 0.05 1 1 0 0 0 0
..TATTAATAACAATAGAGTAAATA.................................................................................................................................................................................................................................. 23 3 20 0.05 1 0 0 0 0 1
...........................................................CAACAGGATCATTAATCAAT............................................................................................................................................................................ 20 3 20 0.05 1 1 0 0 0 0
....................................................................................................................................................................................CAGCAACAGCAACAACAAC.................................................... 19 0 20 0.05 1 0 0 1 0 0

Anti-sense strand reads

TAATAATTATTAATATCTAATTTATTAACTTAACTATGATTGTCGTCGTCGTGACGATTGTTGTCGTTGTACTTAGTTAAAAACTGAATTCAACTCTCAGAAGATGCTAGTCGTGTGTCAAAAGATAAAAGATAATAAGGATTCAATTAAAAGTAAATAACGAATACTAAATTCAACGTTGTCGTTGTCGTTGTTGTTGTCGGCGGCGTCGTCGTCGTCGTTAACGGCGACGTCGTGTCGTTGTCGTTGTC
****************************************************........((((...(((((..((.....))..)))))....))))................((.(((((.(((........)))))))).)).....(((((....)))))............*************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
..................ACTTTAATAACTTAACTATGA.................................................................................................................................................................................................................... 21 2 1 1.00 1 1
...................................................TGACGATTGTTGTCGTTGTAC................................................................................................................................................................................... 21 0 1 1.00 1 1
.............TATCTAAATTATTAACGTAA.......................................................................................................................................................................................................................... 20 2 13 0.23 3 3

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6496:931942-932192 + dmo_914 ATTA--TTA-ATAATT-ATA-GATTAA-----------------------------------------------------------------------------ATAATTGAATTGATACTAACAGCAGCAGCAC---TGCTAACAACAGCAA------------CAT------------GA---ATC---------------------------------------------------------AATT--------T----------------------------------------------------TTGACTTAAGTTG----------------AGAG--------TCTTCTACGATCAGCACAC-AGT---------------------------------------------------T------------------------------------------------------------------------------------------------------------------------------------------TTCTATTTTCTATTATTC-------------------CTAAGTTAATTTTCATTTATTGCTTATGATTT--------------------------------------AAG------TTG------CAACAGCAA---CAGCAAC---------------------------------------------------------------------AACAA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCC--------------GCCGCAGCAGCA-------------G---CA------------------------GCAA----------------------------------TTG---------------------CCGCTGCAGCACAGCAACAGCAACAG
droVir3 scaffold_12855:7977447-7977697 + ATTA--AGA-AAAGAT-----TAAA---CAACAA------------ATAAAGCTTTAAACCTTGTGCAGC------------------------AGCAGCAGCA------------------------------G---CAGCAACAACAACAA------------CAA------------CA---ACT---------------------------------------------------------AAAA--------AATGACGATGGCTGC--------------------------------------------------------------------------------------------------------------------GTGTTATGCTAATTATGACATGTCCTCCATGTCGTCTCTCTCGCT-----------------------------------------------------------------------------------------------------CTCGCATAGCATGTCAGCAGCTCT-------------------------------------------------------------------------------------------------------------------------GCAGCAGCAGCAGCAGCAG---C---------------------------------------------------------------------------AACAA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTG--CAGCAACAACAGC------AGCA----GCA---GCAG-------------------------------------------------------------------CAT---------------------CATCAACA--ACAACAACAGCAGCAG
droGri2 scaffold_14853:8024292-8024519 - ATCA--TGA-ATAACA-------------------------------------------------------------------------------GCAGCAGCAATAATAACAC------------------------CAAC------------AACAAC---AACAGCAGCAGC----------------------------------------------------------A-AACAGCAACA-------------------------ACAAATAATGT-------------TTGAGAAGGAAAATGACAAGCTTGG---------------------------------------------------------------CGTCAA--------------------------------------------------------------------------TTTCAATAACAACTTTAACAAATATTGTGATATGAACG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAATGCAACAA---------C---AA---TC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAC--AACT---------GCAGCAGCC-----GCA---AC------AGCA-------------G---CA------------------------GCAA----------------------------------CATCAAGAAT--------------CATCTGCG--ACAACAAC-GCCACAG
droWil2 scf2_1100000004510:3772753-3773024 - ACTT--TTA-GTGAAA--CAAAAGT---GAATAA-------------------------------------------------------------------------ATAATGC------------------------CAAT------------AATAAC---AGCAACAACATCTGGTGGAGGAGGT---------------------------------------------GGAGCAGCAACA-------------------------GCAGGAGGTGTGGGCCTTGGTTTGGTAGGAGGTGGAACTAGAGGTTTG------------------------------------TCTATGGCCAAGACAC-CGA---------------------------------------------------CTCCAACTACTTCA---------------------------ATTGC-------------------CA-------------------------------------------------------------------------GTGATTA-----------------------------------------T---------------------------------------------------------CTAATGCAGCAG---------C---AA---CAACA--------------------------GTTTCACAGTCATTTCTATC-------------------------AACAA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACA--------------TC---------A----GCAGCAGCAG---CA------------------------GCAA----------------------------------TTG---------------------CCGCAACA--ACAACAACAGCAACAG
dp5 XL_group1e:10122737-10122922 + C--A--GC--------------------------------------------------------------------------------------AGCAGCAGCA------------------------------C---CAGC---AACAGCAC------------CAG------------------CAC---------------------------------------AGTCG---------------TTGGTTCTTGTTG--------------------------------------------------------------ATAATAAAAACGGTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAGACAAAGCTCATTTCCGATAAATTGCAGAGCAATAAGTTTATAAAACAAC------AG---CAA--GAACAGCAACAGC------AACA----GCA---GCAG---CA------------------------GCAACAATTGT---------------------------------------------------CGCCCACC--AAATCAACGGTAAAAC
droPer2 scaffold_26:656311-656524 + AGAA--GAT-CTAAAA--TT-AAATAAATTT-------------------------------------------------AAT------------------------ATAAAAT------------------------CGAA------------AATAAA------AA------------GA---AAA---------------------------------------------------------AAT------------------------------------------------------------GGAAAACTTAAGATC----------------AGAG------------------------AGC-TCT---------------------------------------------------CTCCAACA-----------------------------------------------------------------------------------------------------GC----------------GGTACAACACTTATGTATTATAT-----------------ATAATGTTTCTAGGTCGAATGTC--------------------------------------------------------------G------------------------------------------------------------------------------------AGCAATCACTGGTGCAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAC------AG---CAA--CAACAACA---AC---AGCAACA----------ACAA---CA------------------------GCAA----------------------------------------------------------AAGACTCA--ACAACAACAACGACAC
droAna3 scaffold_13315:311-520 + CTTACAGC--------------------------------------------------------------------------------------AGCAGCAGCA------------------------------A---CAAC---AACAGCAACCGATTC---------------------------------------------------------------------------AGCAGCAGCA-------------------------G------------------------------------------------------------------------------------CAA-----------C-AGC---------------------------------------------------CTCCACA----------AGTAA---------------GT--------------------------------------------------------------------------------------------C---------------------------------------------------------AA--------ATATTAGTTGAAATATTAAGATTCAAAAGCTTATATTCGATCGCTTCTAATT---TCAG---------C---AAATGCAAC---AGC------------------------------------------------------------------AGCAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA---ACAACAAC------AGCA----GCA---GCAGCAGCAACAAAT---------------------A----------------------------------ATG--------G-CA---------CAACAGCA--ACCGCAATCTGTTCAA
droBip1 scf7180000396569:812014-812269 + AGCA--TCA-CCAGCA-ACA-GAATCA-----------------------------------------------------------------------------GCAACAAAAT------------------------CAGC------------AACAACAGCAGCAGCAGCATCAG---CA---ACAG------------------------------------------------------CA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAA----CATCAACAACAGCCAATGCCGTTGCCACCAAATGACATATTATCCCGCGAAGATATAGAGGAGATAGATGCCTTGTTTAATATGTCGCCGTTGCCTTCACTGGGATCTCAGCT-------------------------------------------------------------------------------------------------CA---------ACACC---------------------------AGTGGCAACAA------CAACAATCAGAGCTACAACGGTGGCAGCAA----------------------------------------------------------TCAGAATG--GCAACCAGAACAACAA
droKik1 scf7180000302393:117439-117684 - ATAA--TTG-TAA-----TT---TAACCAGATGGT-------------------------CTTGATCAGC------------------------AGCAGCGGCA------------------------------G---CA---------GC---------------CT------------CG---AT--------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGCCA------------TGCTTACAGTTGTATTTT-----------------------------------------------TTCA---------------------------ATTCA-------------------AA-------------------------------------------------------------------------ACTATTA-----------------------------------------C---------------------------------------------------------CTAATATTGTTA---------C---AATTAT-------------------------------------AATTATTTTTTTTGCTTGATAATGGCAATTACAGAACCGGC-----------------------------------------------------------------------------------------------------------------------------------------------AACAGTGGCAGCAGCATGAGCCACGAAAGCCAGGCTCGC----------------------------ATGAAGC--------------------------A---GC------AGCA----ACA---GCAG---CA------------------------G-------------------------------------------------------------CAACAGCA--GCAGCAACAGCAGCTG
droFic1 scf7180000452569:131495-131669 + ATGTCAAC--------------------------------------------------------------------------------------AACGGCAGCT------------------------------C---CAAC---AACCACAA------------CAACAACCTC------------------------------------------------------------AACATCAACA-------------------GCAACATC------------------------------------------------------------------------------------------------------------------------------------------------------------CACT--------------------------------------------TGT----------------------------------------------------------------------------ACAACTTCTGTCA-----------TTTCCAC-------------------ACTAGCTTC---------------------------------------------------------C------AGCAG---------C---AATAGCGGC---AGC------------------------------------------------------------------AGCAG---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------TCGGA---CTCG-------------G---CA------------------------GCAA----------------------------------CATCAACGCCCT-CA---------CCGCGGCC--ACAACAATCGCGGCGG
droEle1 scf7180000491261:1512543-1512739 + AGCA--GCA--------------------------------------------------------------------------------------ACAGCACCA------------------------------GCAGCAGC---AACAGCAA------------CAA------------------CA---------------------------------------------------------AAG------------------------------------------------------------GACGAGCTTTAGTTT---------------------------------AACGGCCACCACGGTGGCTACTGCTGCCCCCT-----------------------------------------------TGCC---------------------------ATCGCCAACTGTCACGCCGGGGGTCA-------------------------------------------------------------------------GTCAAGT-----------------------------------------C---------------------------------------------------------CAAATACAGCAG---------C---TG---CCA---------------------------------------------------------------------------C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCAGCAACT-----GCA---GC------AGCA----GCA---GCAA---CA------------------------G-------------------------------------------------------------CAACAGTT--GCAGCCACAGCAGCAG
droRho1 scf7180000779986:8777-8961 + AGCA--GC--------------------------------------------------------------------------------------AGCAGCAGCA------------------------------A---CAAC---AACAGCAA------------CAG------------GC---AGC---------------------------------------------AAT------------CCTGCAACT-------------G--------------------------------------------------------------------------------CCGGCCA-----------C-GCC---------------------------------------------------CTCCAGCA-----------------------------------------------------------------------------------------------------GC-------------------TCCACCTCCGGCA-----------ACTCCCCCGATCTGCTGGGCT------------TC---------------------------------------------------------CAGATGGAGCAG---------C---AA---CTGCAGCAGC------------------------------------------------------------------AGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA--------------GCAGCAGCAACA----------GCAC---CA------------------------GCAA----------------------------------CAT------CAG----------------ACCA--GCAAC--CAGCAGCAG
droBia1 scf7180000302041:833014-833251 + ATTA--ACA-ATTATTGGTT-ATTAACATGACAATTTTATACGATTTTAATGC---ATGCC-------------------------TC------GGCGGCAGCA------------------------------G---CAAC---AACAGCAA------------CAG------------CA---ACGC------GAGCAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAAGAAA-----------------------------------------------------------------------------------------------TGTCGGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGTC--A-------CATTTGAAGGCATTTAATTGAATGCGTGAATTGCTTTTGTTGATTG-CACTGACGTTGACTGAGGCAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G---------ACAGCAG--CA---ACA---GC------AACA----GCA---GCAA---CA------------------------G-------------------------------------------------------------CAACTGCA--ACAACTGCAACAGCAG
droTak1 scf7180000414562:353811-354023 + AACA--GC--------------------------------------------------------------------------------------AACGGCAACG------------------------------G---CAAT---TGCAGCAA------------CAT------------G-----------------------------------------------------------------------------TTGACAAGGTCAGC--------------------------------------------------------------------------------------------------------------------GTCTAATGGAAAT----------------------------------------------------------------------------------------------TGACGGCGGTGCAACCGCAGCCATCTATCTCTTCCTCCTCTCGCCAAGTGTGAGTG---------------------------------------------------------------CATAAATCATGCGTTGCCC--------------------------------------AGA------CGA------CAACAGCAG---CAACAGC---------------------------------------------------------------------AACAA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCA--------------GCTACAGCAGCA-------------A---CA------------------------GCAA----------------------------------CAA---------------------CACCAGCA--ACACCAACAGCTACAG
droEug1 scf7180000409765:12479-12684 + AGCA--GC--------------------------------------------------------------------------------------AGCAGCAGCA------------------------------G---CAGC---AACAGCAA------------CAA------------------CAG---------------------------------------GGTGT---------------TCTGCAACT-------------G--------------------------------------------------------------------------------CCGGCCA-----------C-GCC---------------------------------------------------TTCCAGC------------------------------------------------------------------------------------------------------------------------AGTTCCACCTCCGGGA-----------ATTCCCCAGATCTATTGGGCT------------AC---------------------------------------------------------CAGATGGAGCAG---------C---AACTGCAAC---AGC------------------------------------------------------------------AGCAACATC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCACCA--------GC------------AACA----------GCAG---CA------------------------GCAA----------------------------------CAC------CCGTCCCAGCAGCAACACCTCCT--CCAGCAGCAGCATCAG
dm3 chr3L:11288768-11289023 - AGAG--CAA---------------------------------------------------------------------GTGACG--------------------------AACTTACGGCCAACAGCAGCAGCAA---CACC---AACAACAA------------CGG------------CA---ACCG---------------------------------------GC-------------------------------------------------------------------------------------------------------------------------------------------CCGTTTGGAGCAGCGCGCA-----------------------------------------------TGCCACACACAG---------------TT--------------------------------------------------------------------------------------------T---------------------------------------------------------AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATGTGAAATTAGTACAAATCGTGATTTCAACAGCGAACGACGAGCGACGAACGAGCGTCGACG-AAGTGGCGACAACCAAAAAAGAAAAGCACGA----------------------------GAG-AGCA---------GCAGCAGCA-----GCA---GC------AACA-------------G---CA------------------------GTAA----------------------------------TAGCAAAAG---------------C--CACAG--GCAACAACAGTGGCAG
droSim2 3r:24948101-24948373 + ATTA--ACA-ACAATA-ACA-GCATGAATGTCAATTTCAATCAG-------------------------------CACTTGACGCAAC------AGCAGCAGCA------------------------------G---CAAC---AACAGCAG------------CAC------------CA---ACCGCAGTACATGCAACCCAATTGCAATTACAACAACTACACG-----C-AACAGCAGCA-------------------------GCATCTAGTGC-------------CCG-------------------------------------------------------------------------------------------------------CAACAA------------------------------------------------------------------------------------------------------------------------------------CATCCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATCCAACAGCCACTTCTACCAGTGC-CA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC---------------------------AGCAGCAGCAGCAG---CA------------------------GCAATTCCTGGCGCCCACCACCACAACAGCAGCAGTGGTAG---------------------CAGCAGCAGCGCATCAGCAGCACCAG
droSec2 scaffold_4:4444139-4444411 + ATTA--ACA-ACAATA-ACA-GCATGAATGTCAATTTCAATCAG-------------------------------CACTTGACGCAAC------AGCAGCAGCA------------------------------G---CAAC---AACAGCAG------------CAC------------CA---ACCGCAGTACATGCAACCCAATTGTAATTACAACAACTACACG-----C-AACAGCAGCA-------------------------GCATCTAGTGC-------------CCG-------------------------------------------------------------------------------------------------------CAACAA------------------------------------------------------------------------------------------------------------------------------------CATCCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATCCAACAGCCACTTCTACCAGTGC-CA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC---------------------------AGCAGCAGCAGCAG---CA------------------------GCAATTCCTGGCGCCCACCACCACAACAGCAGCAGTGGTAG---------------------CAGCAGCAGCGCATCAGCAGCACCAG
droYak3 X:8106847-8107083 + AATA--CTAAACAATA-TCC-G---------------------------------------TTGTGCGTTGTCAACAAATGACATGAAATTGGCAACGGCAACA------------------------------G---CA---------ACAT------------GGG------------CA---AAAGGAGCACATT-----------------------------------------------------------------------T---------------------------------------------------------------------------------------------------CC-----------------GTTTCAAGCA---------ATTTCCGCGAGAGTCTCTCTCCAGCA-----------------------------------------------------------------------------------------------------GCCGAGTGCCATTTGATTGGTA--------AGCAATTT-----------------------------------------A----------------CGC--------------------------------------AGG------CGA------CAGCAGCAA---CAGCAGC---------------------------------------------------------------------AGCAA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCA--------------GCAGCAGCAACA----------GCAG---CA------------------------GCAA----------------------------------------------------------CAGCAGCA--GCAACAGCAGCAACAG
droEre2 scaffold_4929:6265061-6265295 + AGCA--GC--------------------------------------------------------------------------------------AACAGCAGCA------------------------------G---CAGC---AGCAGCAA------------CAT------------CA---ACT---------------------------------------------------------TAAC--------T----------------------------------------------------GTCACTT------GTCACAGGGACGTTGCAGGGGCCTCCCTCTGGATG------------TCCTGGCGGTGCT-----------------------------------GTCGTCTCTCAC---------------ATGTCAACGGGCGTCGCTTTGCTTGGC----------ATTTTTGTGATGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAATGAAGCAA---------C---GA---GG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAC--AGCAGCAGCAGCAGCAGCG--------GCAGCAGC------AGCA----GCA---GCGG---CA------------------------G-------------------------------------------------------------CAGCAGCA--GCAGCGGCAGCAGCAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
ATTA--TTA-ATAATT-ATA-GATTAA-----------------------------------------------------------------------------ATAATTGAATTGATACTAACAGCAGCAGCAC---TGCTAACAACAGCAA------------CAT------------GA---ATC---------------------------------------------------------AATT--------T----------------------------------------------------TTGACTTAAGTTG----------------AGAG--------TCTTCTACGATCAGCACAC-AGT---------------------------------------------------T------------------------------------------------------------------------------------------------------------------------------------------TTCTATTTTCTATTATTC-------------------CTAAGTTAATTTTCATTTATTGCTTATGATTT--------------------------------------AAG------TTG------CAACAGCAA---CAGCAAC---------------------------------------------------------------------AACAA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCC--------------GCCGCAGCAGCA-------------G---CA------------------------GCAA----------------------------------TTG---------------------CCGCTGCAGCACAGCAACAGCAACAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---CAGCAAC---------------------------------------------------------------------AACAA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCC--------------GCCGCAGCA......................................................................................................................................2811.001100000
...........................................................................................................................................................................................C---------------------------------------------------------AATT--------T----------------------------------------------------TTGACTTAAGTTG----------------AG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCC--------------GCCGCAGCA......................................................................................................................................1830.331100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAA---CAGCAAC---------------------------------------------------------------------AACAA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCC--------------GC.............................................................................................................................................2640.251000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCC--------------GCCGCAGCAGCA-------------G---CA------------------------........................................................................................2240.251100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAA---CAGCAAC---------------------------------------------------------------------AACAA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.................................................................................................................................................................19200.051000010
droVir3
ATTA--AGA-AAAGAT-----TAAA---CAACAA------------ATAAAGCTTTAAACCTTGTGCAGC------------------------AGCAGCAGCA------------------------------G---CAGCAACAACAACAA------------CAA------------CA---ACT---------------------------------------------------------AAAA--------AATGACGATGGCTGC--------------------------------------------------------------------------------------------------------------------GTGTTATGCTAATTATGACATGTCCTCCATGTCGTCTCTCTCGCT-----------------------------------------------------------------------------------------------------CTCGCATAGCATGTCAGCAGCTCT-------------------------------------------------------------------------------------------------------------------------GCAGCAGCAGCAGCAGCAG---C---------------------------------------------------------------------------AACAA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTG--CAGCAACAACAGC------AGCA----GCA---GCAG-------------------------------------------------------------------CAT---------------------CATCAACA--ACAACAACAGCAGCAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................................................................................................................................TGACGATGGCTGC--------------------------------------------------------------------------------------------------------------------GTGTTATGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002000000000000000010000000000000010000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCGTCTCTCTCGCT-----------------------------------------------------------------------------------------------------CTCGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002000000000000000000000000000000000000000000000000000000000000002
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCATGTCAGCAGCTCT-------------------------------------------------------------------------------------------------------------------------GC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................T---------------------------------------------------------AAAA--------AATGACGATGGCTGC--------------------------------------------------------------------------------------------------------------------GT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000010000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................AA--------AATGACGATGGCTGC--------------------------------------------------------------------------------------------------------------------GTGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................AAA--------AATGACGATGGCTGC--------------------------------------------------------------------------------------------------------------------GT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000000000000000000000000000000000000000000000000000000000000
...............................CAA------------ATAAAGCTTTAAACCTTGTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000100000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................AATTATGACATGTCCTCCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000001000000000000000000000000000
.......................................................................................................................................................................................................................................................AA--------AATGACGATGGCTGC--------------------------------------------------------------------------------------------------------------------GTGTTATGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................CT---------------------------------------------------------AAAA--------AATGACGATGGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCAGCAGCTCT-------------------------------------------------------------------------------------------------------------------------GCAGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000001000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATGTCAGCAGCTCT-------------------------------------------------------------------------------------------------------------------------GC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000100000
..................................................AGCTTTAAACCTTGTGCAGC------------------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................ACGATGGCTGC--------------------------------------------------------------------------------------------------------------------GTGTTAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000100000000000000000000000000000000000000000000000000000
................................AA------------ATAAAGCTTTAAACCTTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................A--------AATGACGATGGCTGC--------------------------------------------------------------------------------------------------------------------GTGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GCT-----------------------------------------------------------------------------------------------------CTCGCATAGCATGTCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGC------AGCA----GCA---GCAG-------------------------------------------------------------------CA................................................21200.306005000000000000000000010000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG--CAGCAACAACAGC------AGCA----GCA---GCAG-------------------------------------------------------------------C.................................................2750.201001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGC------AGCA----GCA---GCA......................................................................................................................19200.153000000000000010000000000000000000000000000000000000000000002000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTG--CAGCAACAACA...............................................................................................................................................1980.131000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA--ACAACAACAGCAGCAG21200.102000000000000000000000000000100000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAGC------AGCA----GCA---GCA......................................................................................................................22200.051000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAGC------AGCA----GCA---GCA......................................................................................................................21200.051000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGC------AGCA----GCA---GCAG-------------------------------------------------------------------CAT---------------------CA........................23200.051000100000000000000000000000000000000000000000000000000000000000
..............................................................................................AGCAGCAGCA------------------------------G---CAGCAACAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC------AGCA----GCA---GCAG-------------------------------------------------------------------CAT---------------------CA........................19200.051000000000000000010000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGC------AGCA----GCA---GCAG-------------------------------------------------------------------..................................................21200.051000000000000000000000000000000100000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGC------AGCA----GCA---GCAG-------------------------------------------------------------------CAT---------------------C.........................21200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGC------AGCA----GCA---GCAG-------------------------------------------------------------------CAT---------------------..........................20200.051000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCAG---C---------------------------------------------------------------------------AAC......................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000000100000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC------AGCA----GCA---GCAG-------------------------------------------------------------------CAT---------------------CAT.......................20200.051000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAGCAG---C---------------------------------------------------------------------------AACA.....................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000010000000000000000000000000000000
................................................................TGCAGC------------------------AGCAGCAGCA------------------------------G---CAGCAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
.................................................................................................AGCAGCA------------------------------G---CAGCAACAACAACAA------------C............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000001000000000000000000000000000000000000000000000
.....................................................................C------------------------AGCAGCAGCA------------------------------G---CAGCAACAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000000001000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA----GCA---GCAG-------------------------------------------------------------------CAT---------------------CATCA.....................19200.051000000000000000000000000100000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAACAGC------AGCA----GCA---.........................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
.................................................................................................AGCAGCA------------------------------G---CAGCAACAACAACAA------------CA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000010000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------------------------------------------------------------------------------------------------------------------------GCAGCAGCAGCAGCAGCAG---C---------------------------------------------------------------------------AACA.....................................................................................................................................................................................................................................................................................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAGC------AGCA----GCA---GC.......................................................................................................................20200.051000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGC------AGCA----GCA---GCAG-------------------------------------------------------------------C.................................................19200.051000000000000000100000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAG---C---------------------------------------------------------------------------AACAA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.................................................................................................................................................................21200.051000000000000000000000000000000000010000000000000000000000000000
...................................................................AGC------------------------AGCAGCAGCA------------------------------G---CAGCAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCAGCAG---C---------------------------------------------------------------------------AACA.....................................................................................................................................................................................................................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................GCA------------------------------G---CAGCAACAACAACAA------------CAA------------CA---A........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGC------AGCA----GCA---GC.......................................................................................................................19200.051000000000000000000000000000000000000000000000000000000000001000
.....................................................................C------------------------AGCAGCAGCA------------------------------G---CAGCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000001000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAACA--ACAACAACAGC.....19200.051000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCAG---C---------------------------------------------------------------------------AACAA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.................................................................................................................................................................22200.051000000000000000000000000000000000001000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------------------------------------------------------------------------------------------------------------------------GCAGCAGCAGCAGCAGCAG---C---------------------------------------------------------------------------A........................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCAG---C---------------------------------------------------------------------------AA.......................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000001000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAGC------AGCA----GCA---GCAG-------------------------------------------------------------------CA................................................24200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................CAGC------------------------AGCAGCAGCA------------------------------G---CAGCAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
droGri2
ATCA--TGA-ATAACA-------------------------------------------------------------------------------GCAGCAGCAATAATAACAC------------------------CAAC------------AACAAC---AACAGCAGCAGC----------------------------------------------------------A-AACAGCAACA-------------------------ACAAATAATGT-------------TTGAGAAGGAAAATGACAAGCTTGG---------------------------------------------------------------CGTCAA--------------------------------------------------------------------------TTTCAATAACAACTTTAACAAATATTGTGATATGAACG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAATGCAACAA---------C---AA---TC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAC--AACT---------GCAGCAGCC-----GCA---AC------AGCA-------------G---CA------------------------GCAA----------------------------------CATCAAGAAT--------------CATCTGCG--ACAACAAC-GCCACAGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCC-----GCA---AC------AGCA-------------G---CA------------------------GCA.....................................................................................19200.05110
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCC-----GCA---AC------AGCA-------------G---CA------------------------........................................................................................18200.05110
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCC-----GCA---AC------AGCA-------------G---CA------------------------GCA.....................................................................................20200.05110
droWil2
ACTT--TTA-GTGAAA--CAAAAGT---GAATAA-------------------------------------------------------------------------ATAATGC------------------------CAAT------------AATAAC---AGCAACAACATCTGGTGGAGGAGGT---------------------------------------------GGAGCAGCAACA-------------------------GCAGGAGGTGTGGGCCTTGGTTTGGTAGGAGGTGGAACTAGAGGTTTG------------------------------------TCTATGGCCAAGACAC-CGA---------------------------------------------------CTCCAACTACTTCA---------------------------ATTGC-------------------CA-------------------------------------------------------------------------GTGATTA-----------------------------------------T---------------------------------------------------------CTAATGCAGCAG---------C---AA---CAACA--------------------------GTTTCACAGTCATTTCTATC-------------------------AACAA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACA--------------TC---------A----GCAGCAGCAG---CA------------------------GCAA----------------------------------TTG---------------------CCGCAACA--ACAACAACAGCAACAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................................................................................GGGCCTTGGTTTGGTAGGAGGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
....................................................................................................................................................................................................................................................................................................................................................................................GA---------------------------------------------------CTCCAACTACTTCA---------------------------ATTGC-------------------CA-------------------------------------------------------------------------GT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC-------------------------AACAA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACA--------------TC---------A----GCAGCAGCAG---CA------------------------........................................................................................2820.50100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-------------------------AACAA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACA--------------TC---------A----GCAGCAGCAG---..................................................................................................................2520.50101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC-------------------------AACAA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACA--------------TC---------A----GCAGC..........................................................................................................................2140.25101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-------------------------AACAA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACA--------------TC---------A----GCAGCAGCAG---CA------------------------GC......................................................................................28100.10100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACA--------------TC---------A----GCAGCAGCAG---CA------------------------GC......................................................................................24200.10200110
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-------------------------AACAA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACA--------------TC---------A----GCAGCAGCAG---CA------------------------G.......................................................................................27110.09100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-------------------------AACAA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACA--------------TC---------A----GCAGCAGCAG---CA------------------------........................................................................................26160.06101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACA--------------TC---------A----GCAGCAGCAG---CA------------------------GC......................................................................................25200.05101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACA--------------TC---------A----GCAGCAGCAG---CA------------------------........................................................................................23200.05100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACA--------------TC---------A----GCAGCAGC.......................................................................................................................21200.05100010
dp5
C--A--GC--------------------------------------------------------------------------------------AGCAGCAGCA------------------------------C---CAGC---AACAGCAC------------CAG------------------CAC---------------------------------------AGTCG---------------TTGGTTCTTGTTG--------------------------------------------------------------ATAATAAAAACGGTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAGACAAAGCTCATTTCCGATAAATTGCAGAGCAATAAGTTTATAAAACAAC------AG---CAA--GAACAGCAACAGC------AACA----GCA---GCAG---CA------------------------GCAACAATTGT---------------------------------------------------CGCCCACC--AAATCAACGGTAAAACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................................................................................................................................................................................................................................................AAACGGTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAGACAAAGCTCAT................................................................................................................................................................................................................2411.0010100000000
..............................................................................................................................................................................................................................................................................................................................................GGTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAGACAAAGCTC..................................................................................................................................................................................................................1811.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT---------------------------------------------------CGCCCACC--AAATCAACGG......2011.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA----GCA---GCAG---CA------------------------GCAACAATTGT---------------------------------------------------CGCCCA....................2811.0010000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTCCGATAAATTGCAGAGC.............................................................................................................................................................................................2211.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------AACA----GCA---GCAG---CA------------------------GCAACAATT...............................................................................2350.2010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGC------AACA----GCA---GCAG---CA------------------------........................................................................................20200.1020000000020
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGC------AACA----GCA---GCAG---..................................................................................................................21200.0510100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGC------AACA----GCA---GCAG---CA------------------------........................................................................................22200.0510010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGC------AACA----GCA---GCAG---CA------------------------........................................................................................23200.0510010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGC------AACA----GCA---GCA......................................................................................................................19200.0510000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACAGC------AACA----GCA---GCAG---C.................................................................................................................23200.0510100000000
droPer2
AGAA--GAT-CTAAAA--TT-AAATAAATTT-------------------------------------------------AAT------------------------ATAAAAT------------------------CGAA------------AATAAA------AA------------GA---AAA---------------------------------------------------------AAT------------------------------------------------------------GGAAAACTTAAGATC----------------AGAG------------------------AGC-TCT---------------------------------------------------CTCCAACA-----------------------------------------------------------------------------------------------------GC----------------GGTACAACACTTATGTATTATAT-----------------ATAATGTTTCTAGGTCGAATGTC--------------------------------------------------------------G------------------------------------------------------------------------------------AGCAATCACTGGTGCAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAC------AG---CAA--CAACAACA---AC---AGCAACA----------ACAA---CA------------------------GCAA----------------------------------------------------------AAGACTCA--ACAACAACAACGACACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................................................................................................................................................AACTTAAGATC----------------AGAG------------------------AGC-TCT---------------------------------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.003300000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACA---AC---AGCAACA----------AC.......................................................................................................................18200.051001000
droAna3
CTTACAGC--------------------------------------------------------------------------------------AGCAGCAGCA------------------------------A---CAAC---AACAGCAACCGATTC---------------------------------------------------------------------------AGCAGCAGCA-------------------------G------------------------------------------------------------------------------------CAA-----------C-AGC---------------------------------------------------CTCCACA----------AGTAA---------------GT--------------------------------------------------------------------------------------------C---------------------------------------------------------AA--------ATATTAGTTGAAATATTAAGATTCAAAAGCTTATATTCGATCGCTTCTAATT---TCAG---------C---AAATGCAAC---AGC------------------------------------------------------------------AGCAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA---ACAACAAC------AGCA----GCA---GCAGCAGCAACAAAT---------------------A----------------------------------ATG--------G-CA---------CAACAGCA--ACCGCAATCTGTTCAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----GCA---GCAGCAGCAACAAAT---------------------A----------------------------------AT................................................2211.001000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA---ACAACAAC------AGCA----GCA---GCAGC....................................................................................................................2740.251010000
...........................................................................................................................................................................................................................................AGCAGCAGCA-------------------------G------------------------------------------------------------------------------------CAA-----------C-AGC---------------------------------------------------CT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.251010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA----GCA---GCAGCAGCAACAAAT---------------------.....................................................................................2050.201000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------------------------------------------------------------AGCAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA---ACAACAAC------AGCA----GCA---GCAG.....................................................................................................................2760.171100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA---ACAACAAC------AGCA----GCA---GCAGC....................................................................................................................2670.141010000
.............................................................................................................................................................TTC---------------------------------------------------------------------------AGCAGCAGCA-------------------------G------------------------------------------------------------------------------------CAA-----------C-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1870.141100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------------------------------------------------------------------AGCAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA---ACAACAAC------AG.....................................................................................................................................19200.102000002
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---ACAACAAC------AGCA----GCA---GCA......................................................................................................................19200.102020000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAC------AGCA----GCA---GCAGCAGC.................................................................................................................21200.102020000
.......C--------------------------------------------------------------------------------------AGCAGCAGCA------------------------------A---CAAC---AACAGCAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25100.101010000
...ACAGC--------------------------------------------------------------------------------------AGCAGCAGCA------------------------------A---CAAC---AACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24190.051010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---ACAACAAC------AGCA----GCA---GCAGCAGC.................................................................................................................24200.051010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA---ACAACAAC------AGCA----GC.............................................................................................................................21200.051000001
.....AGC--------------------------------------------------------------------------------------AGCAGCAGCA------------------------------A---CAAC---AACAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAC------AGCA----GCA---GCAGCAGCAACA.............................................................................................................24200.051000001
......GC--------------------------------------------------------------------------------------AGCAGCAGCA------------------------------A---CAAC---AACAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAC------AGCA----GCA---GCAGCAGCA................................................................................................................21200.051010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC------AGCA----GCA---GCAGCAGCAACA.............................................................................................................23200.051010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---ACAACAAC------AGCA----GCA---GCAG.....................................................................................................................20200.051000001
...ACAGC--------------------------------------------------------------------------------------AGCAGCAGCA------------------------------A---CAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAAC------AGCA----GCA---GCAG.....................................................................................................................19200.051000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA---ACAACAAC------AGCA----GC.............................................................................................................................20200.051010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA---ACAACAAC------AGCA----GCA---GCAGC....................................................................................................................23200.051010000
..............................................................................................AGCAGCAGCA------------------------------A---CAAC---AACAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA---ACAACAAC------AGCA----GCA---.........................................................................................................................18200.051000100
..............................................................................................AGCAGCAGCA------------------------------A---CAAC---AACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA---ACAACAAC------AGCA----GCA---GCAGCA...................................................................................................................24200.051000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------------------------------------------------------------AGCAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA---ACAACAAC------AGCA----GC.............................................................................................................................22200.051010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA---ACAACAAC------AGCA----GCA---GCA......................................................................................................................23200.051010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---ACAACAAC------AGCA----GCA---GCAGC....................................................................................................................22200.051000001
droBip1
AGCA--TCA-CCAGCA-ACA-GAATCA-----------------------------------------------------------------------------GCAACAAAAT------------------------CAGC------------AACAACAGCAGCAGCAGCATCAG---CA---ACAG------------------------------------------------------CA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAA----CATCAACAACAGCCAATGCCGTTGCCACCAAATGACATATTATCCCGCGAAGATATAGAGGAGATAGATGCCTTGTTTAATATGTCGCCGTTGCCTTCACTGGGATCTCAGCT-------------------------------------------------------------------------------------------------CA---------ACACC---------------------------AGTGGCAACAA------CAACAATCAGAGCTACAACGGTGGCAGCAA----------------------------------------------------------TCAGAATG--GCAACCAGAACAACAASizeHit CountTotal NormTotal
No Reads
droKik1
ATAA--TTG-TAA-----TT---TAACCAGATGGT-------------------------CTTGATCAGC------------------------AGCAGCGGCA------------------------------G---CA---------GC---------------CT------------CG---AT--------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGCCA------------TGCTTACAGTTGTATTTT-----------------------------------------------TTCA---------------------------ATTCA-------------------AA-------------------------------------------------------------------------ACTATTA-----------------------------------------C---------------------------------------------------------CTAATATTGTTA---------C---AATTAT-------------------------------------AATTATTTTTTTTGCTTGATAATGGCAATTACAGAACCGGC-----------------------------------------------------------------------------------------------------------------------------------------------AACAGTGGCAGCAGCATGAGCCACGAAAGCCAGGCTCGC----------------------------ATGAAGC--------------------------A---GC------AGCA----ACA---GCAG---CA------------------------G-------------------------------------------------------------CAACAGCA--GCAGCAACAGCAGCTGSizeHit CountTotal NormTotal
No Reads
droFic1
ATGTCAAC--------------------------------------------------------------------------------------AACGGCAGCT------------------------------C---CAAC---AACCACAA------------CAACAACCTC------------------------------------------------------------AACATCAACA-------------------GCAACATC------------------------------------------------------------------------------------------------------------------------------------------------------------CACT--------------------------------------------TGT----------------------------------------------------------------------------ACAACTTCTGTCA-----------TTTCCAC-------------------ACTAGCTTC---------------------------------------------------------C------AGCAG---------C---AATAGCGGC---AGC------------------------------------------------------------------AGCAG---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------TCGGA---CTCG-------------G---CA------------------------GCAA----------------------------------CATCAACGCCCT-CA---------CCGCGGCC--ACAACAATCGCGGCGGSizeHit CountTotal NormTotal
No Reads
droEle1
AGCA--GCA--------------------------------------------------------------------------------------ACAGCACCA------------------------------GCAGCAGC---AACAGCAA------------CAA------------------CA---------------------------------------------------------AAG------------------------------------------------------------GACGAGCTTTAGTTT---------------------------------AACGGCCACCACGGTGGCTACTGCTGCCCCCT-----------------------------------------------TGCC---------------------------ATCGCCAACTGTCACGCCGGGGGTCA-------------------------------------------------------------------------GTCAAGT-----------------------------------------C---------------------------------------------------------CAAATACAGCAG---------C---TG---CCA---------------------------------------------------------------------------C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCAGCAACT-----GCA---GC------AGCA----GCA---GCAA---CA------------------------G-------------------------------------------------------------CAACAGTT--GCAGCCACAGCAGCAGSizeHit CountTotal NormTotal
No Reads
droRho1
AGCA--GC--------------------------------------------------------------------------------------AGCAGCAGCA------------------------------A---CAAC---AACAGCAA------------CAG------------GC---AGC---------------------------------------------AAT------------CCTGCAACT-------------G--------------------------------------------------------------------------------CCGGCCA-----------C-GCC---------------------------------------------------CTCCAGCA-----------------------------------------------------------------------------------------------------GC-------------------TCCACCTCCGGCA-----------ACTCCCCCGATCTGCTGGGCT------------TC---------------------------------------------------------CAGATGGAGCAG---------C---AA---CTGCAGCAGC------------------------------------------------------------------AGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA--------------GCAGCAGCAACA----------GCAC---CA------------------------GCAA----------------------------------CAT------CAG----------------ACCA--GCAAC--CAGCAGCAGSizeHit CountTotal NormTotal
No Reads
droBia1
ATTA--ACA-ATTATTGGTT-ATTAACATGACAATTTTATACGATTTTAATGC---ATGCC-------------------------TC------GGCGGCAGCA------------------------------G---CAAC---AACAGCAA------------CAG------------CA---ACGC------GAGCAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAAGAAA-----------------------------------------------------------------------------------------------TGTCGGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGTC--A-------CATTTGAAGGCATTTAATTGAATGCGTGAATTGCTTTTGTTGATTG-CACTGACGTTGACTGAGGCAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G---------ACAGCAG--CA---ACA---GC------AACA----GCA---GCAA---CA------------------------G-------------------------------------------------------------CAACTGCA--ACAACTGCAACAGCAGSizeHit CountTotal NormTotal
No Reads
droTak1
AACA--GC--------------------------------------------------------------------------------------AACGGCAACG------------------------------G---CAAT---TGCAGCAA------------CAT------------G-----------------------------------------------------------------------------TTGACAAGGTCAGC--------------------------------------------------------------------------------------------------------------------GTCTAATGGAAAT----------------------------------------------------------------------------------------------TGACGGCGGTGCAACCGCAGCCATCTATCTCTTCCTCCTCTCGCCAAGTGTGAGTG---------------------------------------------------------------CATAAATCATGCGTTGCCC--------------------------------------AGA------CGA------CAACAGCAG---CAACAGC---------------------------------------------------------------------AACAA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCA--------------GCTACAGCAGCA-------------A---CA------------------------GCAA----------------------------------CAA---------------------CACCAGCA--ACACCAACAGCTACAGSizeHit CountTotal NormTotal
No Reads
droEug1
AGCA--GC--------------------------------------------------------------------------------------AGCAGCAGCA------------------------------G---CAGC---AACAGCAA------------CAA------------------CAG---------------------------------------GGTGT---------------TCTGCAACT-------------G--------------------------------------------------------------------------------CCGGCCA-----------C-GCC---------------------------------------------------TTCCAGC------------------------------------------------------------------------------------------------------------------------AGTTCCACCTCCGGGA-----------ATTCCCCAGATCTATTGGGCT------------AC---------------------------------------------------------CAGATGGAGCAG---------C---AACTGCAAC---AGC------------------------------------------------------------------AGCAACATC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCACCA--------GC------------AACA----------GCAG---CA------------------------GCAA----------------------------------CAC------CCGTCCCAGCAGCAACACCTCCT--CCAGCAGCAGCATCAGSizeHit CountTotal NormTotal
No Reads
dm3
AGAG--CAA---------------------------------------------------------------------GTGACG--------------------------AACTTACGGCCAACAGCAGCAGCAA---CACC---AACAACAA------------CGG------------CA---ACCG---------------------------------------GC-------------------------------------------------------------------------------------------------------------------------------------------CCGTTTGGAGCAGCGCGCA-----------------------------------------------TGCCACACACAG---------------TT--------------------------------------------------------------------------------------------T---------------------------------------------------------AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATGTGAAATTAGTACAAATCGTGATTTCAACAGCGAACGACGAGCGACGAACGAGCGTCGACG-AAGTGGCGACAACCAAAAAAGAAAAGCACGA----------------------------GAG-AGCA---------GCAGCAGCA-----GCA---GC------AACA-------------G---CA------------------------GTAA----------------------------------TAGCAAAAG---------------C--CACAG--GCAACAACAGTGGCAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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..................................................................................CG--------------------------AACTTACGGCCAACAGCAGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..................................................................................CG--------------------------AACTTACGGCCAACAGCAGCAGCAA---........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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........A---------------------------------------------------------------------GTGACG--------------------------AACTTACGGCCAACAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGCGACGAACGAGCG......................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTACAAATCGTGATTTCAACAGC.............................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGAGCGTCGACG-AAGTGGC........................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................CG--------------------------AACTTACGGCCAACAGCAGCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAACGACGAGCGACGAAC...........................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................AGCGCGCA-----------------------------------------------TGCCACACACAG---------------TT--------------------------------------------------------------------------------------------T---------------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAACGACGAGCGACGAA............................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000010000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA---GC------AACA-------------G---CA------------------------GTAA----------------------------------TAGCAAAAG---------------C--C......................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCGAACGACGAGCGAC...............................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
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.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACAGCGAACGACGAG...................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTCGACG-AAGTGGCGA......................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.GAG--CAA---------------------------------------------------------------------GTGACG--------------------------AACTTACGGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...G--CAA---------------------------------------------------------------------GTGACG--------------------------AACTTACGGCCAACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................ACAA------------CGG------------CA---ACCG---------------------------------------GC-------------------------------------------------------------------------------------------------------------------------------------------CCGTTTGGAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------GTAA----------------------------------TAGCAAAAG---------------C--CAC....................1811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGACGAGCGACGAACGAGC.......................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAACGACGAGCGACGAACGAG........................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
..AG--CAA---------------------------------------------------------------------GTGACG--------------------------AACTTACGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGAAATTAGTACAAATCGTGAT......................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------------GTAA----------------------------------TAGCAAAAG---------------C--CACA...................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAAAGCACGA----------------------------GAG-AGC.............................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAACGACGAGCGACGAACGAGCG......................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACCAAAAAAGAAAAGCA...................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGAGCGTCGACG-AAGT...........................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...........................................................................................................................................................................................CG---------------------------------------GC-------------------------------------------------------------------------------------------------------------------------------------------CCGTTTGGAGCAGCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................TGACG--------------------------AACTTACGGCCAACAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAACGAGCGTCGACG-AAGTGGC........................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTACAAATCGTGATTTCAACAGCG............................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................GTTTGGAGCAGCGCGCA-----------------------------------------------TGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........A---------------------------------------------------------------------GTGACG--------------------------AACTTACGGCCAACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGAGCGTCGACG-AAGTGGCGAC.....................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................AACTTACGGCCAACAGCAGCAGCAA---CA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCAACAGCGAACGACGAGCGG................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTTCAACAGCGAACGAC......................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTACAAATCGTGATTTCAACAG..............................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCGAACGACGAGCGA................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
....................................................................................................................................................................................CA---ACCG---------------------------------------GC-------------------------------------------------------------------------------------------------------------------------------------------CCGTTTGGAGCAGCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGAGCGACGAACGAGCGT.....................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGACGAGCGACGAACGA.........................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGCACGA----------------------------GAG-AGCA---------GCAGC..............................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................TGACG--------------------------AACTTACGGCCAACAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGAGCGTCGACG-AAGTGGCGACAACC.................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACAGCGAACGACGAGCGG................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGA----------------------------GAG-AGCA---------GCAGCAGCA-----GCA---GC------AACA-------------......................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGACGAGCGACGAACGAG........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTCAACAGCGAACGACGA....................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACAGCGAACGACGAGCGACGA.............................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................GCAGCGCGCA-----------------------------------------------TGCCACACAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................ACCG---------------------------------------GC-------------------------------------------------------------------------------------------------------------------------------------------CCGTTTGGAGCAGCGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGACGAACGAGCGTCGA..................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGTGATTTCAACAGCG............................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCGAACGACGAGCGAC...............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...G--CAA---------------------------------------------------------------------GTGACG--------------------------AACTTACGGCCAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAACAGCGAACGACGAG...................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATGTGAAATTAGTACAAATCGTGA.......................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAAAGAAAAGCACGA----------------------------GAG-AG..............................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGCGTCGACG-AAGTGGCGACAACC.................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGAGCGTCGACG-AAGTGGCGA......................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAGCGACGAACGAGCG......................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTCAACAGCGAACGACGAGCGACG..............................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................ACTTACGGCCAACAGCAGCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................CGGCCAACAGCAGCAGCAA---CC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------------------GAG-AGCA---------GCAGCAGCA-----GC...................................................................................................................................................1950.4020000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------------------GAG-AGCA---------GCAGCAGCA-----G....................................................................................................................................................1860.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................CAGCAGCAGCAA---CACC---AACAACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-AGCA---------GCAGCAGCA-----GCA---GC------A......................................................................................................................................21140.2940000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAG-AGCA---------GCAGCAGCA-----GCA---GC------A......................................................................................................................................2240.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------------------GAG-AGCA---------GCAGCAGCA-----GCA---GC------AT.....................................................................................................................................2440.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCA-----GCA---GC------AACA-------------G---CA------------------------GT......................................................................................22150.1320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000100000000000000000000000000000000000
droSim2
ATTA--ACA-ACAATA-ACA-GCATGAATGTCAATTTCAATCAG-------------------------------CACTTGACGCAAC------AGCAGCAGCA------------------------------G---CAAC---AACAGCAG------------CAC------------CA---ACCGCAGTACATGCAACCCAATTGCAATTACAACAACTACACG-----C-AACAGCAGCA-------------------------GCATCTAGTGC-------------CCG-------------------------------------------------------------------------------------------------------CAACAA------------------------------------------------------------------------------------------------------------------------------------CATCCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATCCAACAGCCACTTCTACCAGTGC-CA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC---------------------------AGCAGCAGCAGCAG---CA------------------------GCAATTCCTGGCGCCCACCACCACAACAGCAGCAGTGGTAG---------------------CAGCAGCAGCGCATCAGCAGCACCAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................AACAGCAG------------CAC------------CA---ACCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000000100000
.............................GTCAATTTCAATCAG-------------------------------CACTTGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
...................................................................................GCAAC------AGCAGCAGCA------------------------------G---CAAC---.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100000000001000000
droSec2
ATTA--ACA-ACAATA-ACA-GCATGAATGTCAATTTCAATCAG-------------------------------CACTTGACGCAAC------AGCAGCAGCA------------------------------G---CAAC---AACAGCAG------------CAC------------CA---ACCGCAGTACATGCAACCCAATTGTAATTACAACAACTACACG-----C-AACAGCAGCA-------------------------GCATCTAGTGC-------------CCG-------------------------------------------------------------------------------------------------------CAACAA------------------------------------------------------------------------------------------------------------------------------------CATCCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATCCAACAGCCACTTCTACCAGTGC-CA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC---------------------------AGCAGCAGCAGCAG---CA------------------------GCAATTCCTGGCGCCCACCACCACAACAGCAGCAGTGGTAG---------------------CAGCAGCAGCGCATCAGCAGCACCAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................AGCAGCA------------------------------G---CAAC---AACAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510010
...................................................................................................CAGCA------------------------------G---CAAC---AACAGCAG------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510010
droYak3
AATA--CTAAACAATA-TCC-G---------------------------------------TTGTGCGTTGTCAACAAATGACATGAAATTGGCAACGGCAACA------------------------------G---CA---------ACAT------------GGG------------CA---AAAGGAGCACATT-----------------------------------------------------------------------T---------------------------------------------------------------------------------------------------CC-----------------GTTTCAAGCA---------ATTTCCGCGAGAGTCTCTCTCCAGCA-----------------------------------------------------------------------------------------------------GCCGAGTGCCATTTGATTGGTA--------AGCAATTT-----------------------------------------A----------------CGC--------------------------------------AGG------CGA------CAGCAGCAA---CAGCAGC---------------------------------------------------------------------AGCAA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCA--------------GCAGCAGCAACA----------GCAG---CA------------------------GCAA----------------------------------------------------------CAGCAGCA--GCAACAGCAGCAACAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------GCAGCAGCAACA----------GCAG---CA------------------------GCAA----------------------------------------------------------CAGC......................27200.05100100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA----------------------------------------------------------CAGCAGCA--GCAACAGCA.......20200.05101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC---------------------------------------------------------------------AGCAA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCA--------------GCAGCAGCA......................................................................................................................................23200.05100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA----------GCAG---CA------------------------GCAA----------------------------------------------------------CAGC......................19200.05101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---------------------------------------------------------------------AGCAA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCA--------------GCAGCA.........................................................................................................................................19200.05101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA--------------GCAGCAGCAACA----------GCAG---CA------------------------........................................................................................22200.05101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---CA------------------------GCAA----------------------------------------------------------CAGCAGCA--GCA.............19200.05101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---CAGCAGC---------------------------------------------------------------------AGCAA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGC..............................................................................................................................................................19200.05101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCA--------------GCAGCAGCAACA----------GC.......................................................................................................................21200.05100100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCA--GCAACAGCAGCAAC..20200.05100100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---CAGCAGC---------------------------------------------------------------------AGCAA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCA--------------...............................................................................................................................................20200.05101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------GCAG---CA------------------------GCAA----------------------------------------------------------CAGCAGCA--GCAACAGC........27200.05100100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---CAGCAGC---------------------------------------------------------------------AGCAA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCA--------------GCAGCA.........................................................................................................................................26200.05100010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA----------------------------------------------------------CAGCAGCA--GCAACAGC........19200.05101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA----------GCAG---CA------------------------GCAA----------------------------------------------------------CAGCAGCA--GCA.............26200.05100010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGC---------------------------------------------------------------------AGCAA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCA--------------GCAGCAGCA......................................................................................................................................24200.05101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---------------------------------------------------------------------AGCAA---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCA--------------GCAGCAGCAACA----------GCA......................................................................................................................27200.05101000000000
droEre2
AGCA--GC--------------------------------------------------------------------------------------AACAGCAGCA------------------------------G---CAGC---AGCAGCAA------------CAT------------CA---ACT---------------------------------------------------------TAAC--------T----------------------------------------------------GTCACTT------GTCACAGGGACGTTGCAGGGGCCTCCCTCTGGATG------------TCCTGGCGGTGCT-----------------------------------GTCGTCTCTCAC---------------ATGTCAACGGGCGTCGCTTTGCTTGGC----------ATTTTTGTGATGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAATGAAGCAA---------C---GA---GG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAC--AGCAGCAGCAGCAGCAGCG--------GCAGCAGC------AGCA----GCA---GCGG---CA------------------------G-------------------------------------------------------------CAGCAGCA--GCAGCGGCAGCAGCAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC------AGCA----GCA---GCGG---CA------------------------G-------------------------------------------------------------CAGCAG....................24200.0510000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCG--------GCAGCAGC------AGC....................................................................................................................................24200.0510000100
...A--GC--------------------------------------------------------------------------------------AACAGCAGCA------------------------------G---CAGC---AGCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC------AGCA----GCA---GCGG---CA------------------------G-------------------------------------------------------------CAGCAGC...................24200.0510000100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCG--------GCAGCAGC------AGCA----GC.............................................................................................................................19200.0510100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAGCG--------GCAGCA...............................................................................................................................................22200.0511000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCG--------GCAGCAGC------.......................................................................................................................................19200.0510000010
.......C--------------------------------------------------------------------------------------AACAGCAGCA------------------------------G---CAGC---AGCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCA--GCAGCGGCAGCAGCAG24200.0510000010
..................................................................................................GCAGCA------------------------------G---CAGC---AGCAGCAA------------CA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA----GCA---GCGG---CA------------------------G-------------------------------------------------------------CAGC......................18200.0510000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCA--GCAGCGGCAGCAGCA.22200.0510000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA--GCAGCGGCAGCAGC..18200.0510000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC------AGCA----GCA---GCGG---CA------------------------G-------------------------------------------------------------CAGCA.....................22200.0510000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCG--------GCAGCAGC------AG.....................................................................................................................................24200.0510000010

Generated: 05/17/2015 at 11:22 PM