ID:

dmo_903

 Coordinate:

scaffold_6496:375707-375857 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.8 -23.8 -23.8

Flybase annnotation

CDS [Dmoj\GI19773-cds]; exon [dmoj_GLEANR_4683:3]; intron [Dmoj\GI19773-in]

No Repeatable elements found

mature
star
  1. dmo_903  scaffold_6496:375701-375726 +
  2. dmo_903  scaffold_6496:375776-375801 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTCCATGTGAAACAACAACTCCTCCATGTGTGACAACAACGACTTGTGTGACAACAACTACTTGTGTGACAACAACTACTTGTGTGACAACAACTCCTCCATGTGTGACAACAACGACTTGTGTGACAACAACTACTTGTGTGACAACAACTACTTGTGTGACAACTACTACTTGTGCGACAACAACTCCTTGTCCTCCAGCAACAACTACCAAAGGTCGCAAACAGAATGTGTCGTCTGTGACTAATAGT
**************************************************************..(((.(((.(((.((.((((((.(((.(((..........(((.(((.(((....)))))).)))........)))))).)).)))).)).)))))).)))..............(((((.......))))).....*************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body
..........................................................................................................................................................................................................................CGCAAACAGAATGTGTCGTCTGT.......... 23 0 1 2.00 2 0 2
..........................................................................................................................................................................................................................CGCAAACAGAATGTGTCGTCT............ 21 0 1 1.00 1 1 0
.............................................................................................................................................................................................................AACTACCAAAGGTCGCAAACAGAATGTGT................. 29 0 1 1.00 1 0 1
...............................................................................................................................................................................................................................ACAGAATGTGTCGTCTGTGA........ 20 0 1 1.00 1 1 0
..................................................................................................................................................................................GACAACAACTCCTTGTCCTCCA................................................... 22 0 1 1.00 1 1 0
...............................................................................................................................................................................................................................ACAGAATGTGTCGTCTGT.......... 18 0 1 1.00 1 1 0
.............................................................................................................................................................................................................AACTACCAAAGGTCGCAAACAGA....................... 23 0 1 1.00 1 1 0
...............................................................................................................................................................................................................................ACAGAATGTGTCGTCTGTG......... 19 0 1 1.00 1 1 0
...........................................................................................................................................................................................................ACAACTACCAAAGGTCGCAAAC.......................... 22 0 1 1.00 1 1 0
.................................................................................................................................................................................................................ACCAAAGGTCGCAAACAGAATGT................... 23 0 1 1.00 1 1 0
...............................GACAACAACGACTTGTGTGACAACAACTA............................................................................................................................................................................................... 29 0 2 0.50 1 1 0
..............................................................TGTGTGACAACAACTACTTGTGTGAC................................................................................................................................................................... 26 0 4 0.50 2 2 0
..........................................................................................................GACAACAACGACTTGTGTGACAACAACTA.................................................................................................................... 29 0 2 0.50 1 1 0
............................................TGTGTGACAACAACTACTTGTGTGAC..................................................................................................................................................................................... 26 0 4 0.50 2 2 0
.......................CCATGTGTGACAACAACGACTTGTG........................................................................................................................................................................................................... 25 0 2 0.50 1 1 0
..................................................................................................CCATGTGTGACAACAACGACTTGTG................................................................................................................................ 25 0 2 0.50 1 1 0
.......................................................................................................................TGTGTGACAACAACTACTTGTGTGAC.......................................................................................................... 26 0 4 0.50 2 2 0
....................................................AACAACTACTTGTGTGACAACAACTA............................................................................................................................................................................. 26 0 2 0.50 1 1 0
...............................................................................................................................AACAACTACTTGTGTGACAACAACTA.................................................................................................. 26 0 2 0.50 1 1 0
.........................................................................................................................................TGTGTGACAACAACTACTTGTGTGAC........................................................................................ 26 0 4 0.50 2 2 0
......................................................CAACTACTTGTGTGACAACAACT.............................................................................................................................................................................. 23 0 3 0.33 1 1 0
........................................................................CAACTACTTGTGTGACAACAACT............................................................................................................................................................ 23 0 3 0.33 1 1 0
.................................................................................................................................CAACTACTTGTGTGACAACAACT................................................................................................... 23 0 3 0.33 1 1 0
......................................................................................................................................ACTTGTGTGACAACAACTACTT............................................................................................... 22 0 4 0.25 1 1 0
..........................................................................................................................................GTGTGACAACAACTACTTGTGTG.......................................................................................... 23 0 4 0.25 1 1 0
...........................................................ACTTGTGTGACAACAACTACTT.......................................................................................................................................................................... 22 0 4 0.25 1 1 0
....................................................................GCAACAACTACTTGTGTGACAAC................................................................................................................................................................ 23 1 4 0.25 1 1 0
...............................................GTGACAACAACTACTTGTGT........................................................................................................................................................................................ 20 0 4 0.25 1 1 0
..........................................................................................................................GTGACAACAACTACTTGTGT............................................................................................................. 20 0 4 0.25 1 1 0
...............................................................GTGTGACAACAACTACTTGTGTG..................................................................................................................................................................... 23 0 4 0.25 1 1 0
...............................................................................................................................................GCAACAACTACTTGTGTGACAAC..................................................................................... 23 1 4 0.25 1 1 0
.............................................................................................................................GCAACAACTACTTGTGTGACAAC....................................................................................................... 23 1 4 0.25 1 1 0
..................................................GCAACAACTACTTGTGTGACAAC.................................................................................................................................................................................. 23 1 4 0.25 1 1 0
............................................................................................................................................GTGACAACAACTACTTGTGT........................................................................................... 20 0 4 0.25 1 1 0
.................................................................GTGACAACAACTACTTGTGT...................................................................................................................................................................... 20 0 4 0.25 1 1 0
.........................................ACTTGTGTGACAACAACTACTT............................................................................................................................................................................................ 22 0 4 0.25 1 1 0
........................................................................................................................GTGTGACAACAACTACTTGTGTG............................................................................................................ 23 0 4 0.25 1 1 0
.............................................GTGTGACAACAACTACTTGTGTG....................................................................................................................................................................................... 23 0 4 0.25 1 1 0
....................................................................................................................ACTTGTGTGACAACAACTACTT................................................................................................................. 22 0 4 0.25 1 1 0
.......TGAAACAACAACTCCTCCATGTGTGACA........................................................................................................................................................................................................................ 28 0 5 0.20 1 1 0
....ATGTGAAACAACAACTCCTCCATGTGTG........................................................................................................................................................................................................................... 28 0 6 0.17 1 1 0
.........AAACAACAACTCCTCCATGTGT............................................................................................................................................................................................................................ 22 0 7 0.14 1 1 0
..........AACAACAACTCCTCCATGTGTGAC......................................................................................................................................................................................................................... 24 0 7 0.14 1 1 0
................AACTCCTCCATGTGTGACAA....................................................................................................................................................................................................................... 20 0 8 0.13 1 1 0
...........................................................................................AACTCCTCCATGTGTGACAA............................................................................................................................................ 20 0 8 0.13 1 1 0
.........AAACAACAACTCCTCCATGTG............................................................................................................................................................................................................................. 21 0 9 0.11 1 1 0
.....................................................................................GACAACAACTCCTCCATGTG.................................................................................................................................................. 20 0 13 0.08 1 1 0
...........ACAACAACTCCTCCATGTGTGA.......................................................................................................................................................................................................................... 22 0 14 0.07 1 1 0
......................................................................................ACAACAACTCCTCCATGTGTGA............................................................................................................................................... 22 0 14 0.07 1 1 0
...........ACAACAACTCCTCCATGTGT............................................................................................................................................................................................................................ 20 0 14 0.07 1 1 0
......................................................................................ACAACAACTCCTCCATGTGT................................................................................................................................................. 20 0 14 0.07 1 1 0
.....................................................................................GACAACAACTCCTCCATGT................................................................................................................................................... 19 0 18 0.06 1 1 0

Anti-sense strand reads

GAGGTACACTTTGTTGTTGAGGAGGTACACACTGTTGTTGCTGAACACACTGTTGTTGATGAACACACTGTTGTTGATGAACACACTGTTGTTGAGGAGGTACACACTGTTGTTGCTGAACACACTGTTGTTGATGAACACACTGTTGTTGATGAACACACTGTTGATGATGAACACGCTGTTGTTGAGGAACAGGAGGTCGTTGTTGATGGTTTCCAGCGTTTGTCTTACACAGCAGACACTGATTATCA
***************************************************..(((.(((.(((.((.((((((.(((.(((..........(((.(((.(((....)))))).)))........)))))).)).)))).)).)))))).)))..............(((((.......))))).....************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
......................................................................................................................................................................................................................................CCCACCAAACACTGATTATCA 21 3 3 0.33 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6496:375657-375907 + dmo_903 CTCCAT------------GTGAAACAACAACTCCTCCATGTGTG-----------------------ACAACAACG---ACT---------TGTGTGACAACAACTAC---TTGTGTGACAACAA---CTACTT---G------------------------------------------TGTGACAAC------AACTCCTCCATGTGTG------ACAA---CAACGACTTGTGTGACAACAA------------------------------------------CTACTTGTGTG-----------ACAAC---------AACTAC------------------TTGTG------------------------TGACAACTACTA--------------------------------------------CTTGTGCGACAACAACTCCT---------------------------------------------------------------------------------------------------------------------------------------------------TGTCCT---------------------------------CCAGCAACAACTACCAA--AGGTC--GCAAACAGAATGTGTCGTCTGTGACTAATAGT
droVir3 scaffold_13246:1774136-1774332 - CACCAA------------------CAACAACCACT---TGCACC-----------------------ACAACAACAACCACT---------ACTACAACAA---CAACAACT------ACTACAA---CAACCA---C------------------------------------------CACAACTACAACAACAACCTGCACCACACCC------ACAA---CAACCACTTGCACAACAACAA------------------------------------------CAACCACTACG-----------ACAAC---------AACCAC------------------CAC---------------------------TACA------------------------------------------AC--------AACCACTACTACAACAACC---------------------------------------------------------------------------------------------------------------------------------------------------ACTACT---------------------------------ACAACAACCACAACC-------------------------------------------
droGri2 scaffold_14853:7417704-7417883 - CTGAGA------------------CAACTACCACTCCG--------------------------------ACAACTACCACTGAGACAACTACTACTCCGACAACTAC------------------------CA---C------------------TG---AGA------------------CAACTACCACTCC---GAC------AACTACAACAG------AGACAACTACCACTCCGACAA------------------------------------------CTACCACGGAG-----------ACAAC---------TACCACT---------------------C------------------------CGACAACTA-----------------------------------------------CCACTCCGACAACTACAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGAGACAACTACC--A----------------------------------------
droWil2 scf2_1100000004512:1553644-1553855 - AAGA-ACAG---------------CAACAACAACAACAACAAAA-----------ACAACAACTACT------------------------ACTACAACAACAAC---TACA------ACAACAA---CAACAA---C------------------------------------------TACAACAACAACAACAACCAC------AACAACAACAACAA---CAACAACAACAACAACAACTA------------------------------------CAACAAC--------------------AACAAC---------AACAACAAC------------------------------------------------------AACTACTACTA---------------------CTACAACAA-----CAACTACAACAACAACAACT---------------------------------------------------------------------------------------------------------------------------------------------------ACAACA---------------------------------ACAACAACAAACACA--A----------------------------------------
dp5 3:19009227-19009437 - CACCCT------------ATACCACAACAACAACACCCTGTACT-----------------------ACAACAACA---A------CACCCTGTACTACAACAACAACCTGC------GGCACAA---CACCCT---A------------------------------------------TACCACAACAACAACACCCTG------TACT------A---------------------CAACAA------------------------------------------CAACCTGCGGCAC--------AACAAC---------AGCACCCTGTACTACAACAACAACCTGCG------G------------------CACA------------------------------------------AC--ACCCTACACCACAACAACAACACCC---------------------------------------------------------------------------------------------------------------------------------------------------TGTACT---------------------------------ACAACAACAAC-----------------------------------------------
droPer2 scaffold_17:587986-588213 + CTCCAT------------GTACAACAACACCACCACCCTGTACT-----------------------ACACCAAGA---C------CCCCATGTACAACAACAAAGCC---------------AC---C---CT---G------------------TA---CTACACCAAGGCCTCCATGTACAACAACAACACCACCCTG------TACT------ACACCAAGACCCCCATGTACAACAACAA------------------------------------------GG-----------------------------CCACCCTGTACT---------------------------ACACCAAGGCCTCCATGTACAACAACAC-----------------------------------------------CAGCACCCTGTACTACACCA---------------------------------------------------------------------------------------------------------------------------------------------------AGGCCT---------------------------------CCATGTACAACAACA--A----------------------------------------
droAna3 scaffold_12943:4340984-4341186 + CTACTC------------GTAGACCAACAACAACAACAACAACC------ACAAC--------AAC---TCGTAGA---------------CCAACAACAA---CAACAACA------ACTACAA---CAACTC---G------------------------------------------TAGACCAACAACAACAACCAC------AACTACTCGTAGAC---CAACAACGACTACAACAACCA------------------------------------------CA-----------------------------------ACTAC------------------TCGTA------------------------AACCAACTACTACTACC------------------------------AC--------------TACTACTACTACT---------------------------------------------------------------------------------------------------------------------------------------------------ACTACC---------------------------------ACTACTACTACTCCCAAA----------------------------------------
droBip1 scf7180000394737:16193-16386 - CACCAC-AA---------------CGACAACCACCCCGACGACC-----------ACCACAACAACT------------------------ACTACGACAACCAC---------------GACAA---CAACCA---C------------------------------------------TACCACAACTACAACACCTTG------TGCC------C---------------------CTACAA------------------------CGACTTCCACTACAACGACA-----------ACCACTACAACAAC---------TACCACA---------------------A------CA---------------ACC---ACTACTA--------------------------------------------CAACCACCACGACAACACCT---------------------------------------------------------------------------------------------------------------------------------------------------TGTGCT---------------------------------CCGACAACGACTTCC--A----------------------------------------
droKik1 scf7180000302656:7373-7586 + AACA-ACAA---------------CTACAACAACAACAACGACT-----------ACAACAACAACA------------------------ACTACAACAACGAC---------------TACAA---CAACAA---C------------------------------------------G---ACTAC-----------------------------------------------------------------------------------------------------------------------AACAACAACGACGACAACCACT---------------------------ACAACAACCTGTTCGACAACC---ACAACA-----------------------------------------C---GAAAAC------------------------------------------------------------------------------------------CATCATGCAAGCCGAAGAAAACC------ACTCCCCCACCTTGCAAGTGCACAACAACCAATCCACCACCTTGCAAG---------------------------------CGCACAACAACCACT-------------------------------------------
droFic1 scf7180000453948:611631-611816 + CGCCAT------------GTGAAACGACAACTCCACCATGTGCG-----------------------ACGACAACG---A------CCACTGAAGCTCCAACGA------------------------------------------------------------------------------CAACAACAACAACAGTTTG------TGCT------C---------------------CAGTAA------------------------CAACGACCACTGAAGCCCC--------------------AACAACAACGACGACCACCACT---------------------------ACA------------------------------------G---------------------AAGCTCCAA-----CGACAACAACAACTGAAGCC---------------------------------------------------------------------------------------------------------------------------------------------------TGTGCT---------------------------------CCAACAACAACGACC--A----------------------------------------
droEle1 scf7180000490996:311032-311264 + CGCCCT------------GTACAACAACACCACCACCGTGTACA-----------------------ACAACAACA---C------AACCTTGTACTACAACAACACC---------------GC------CGT---G------------------TA---CAACAACAACACCACCTTGTACAACAACACCACCACCGTG------TACA------ACAACAACACCACCTTGTACTACAACAA------------------------------------------CACC-----------------------------------GCCG---------------------TGTACAACATCACAACCACCGTGTACAACAACACCAC------------------------------------CAC--AGTGTACAACAACAACATCACCT---------------------------------------------------------------------------------------------------------------------------------------------------TGTACT---------------------------------ACAACA----CTACC--A----------------------------------------
droRho1 scf7180000779504:47245-47481 - CAACAACCACGACGACAACCACCAAAAAGACCACAACT-----------------------------------------------------TGTGCTCCAACAACCAC---------------GA---CGACAA---CCACTAAAAAGACCACATCTTGTGCT------------------CCAACAACCACGAC---AAC------AACCACCAAAAAGA---CTACGACTTGTGCTCCAACAA------------------------------------------CCAC-----------------------------------GACA---------------------A------CA---------------ACC---ACCAAA---------A-----------------------------------AGTCCACAACAACAACCACT---------------------------------------------------------------------------------------------------------------------------------------------------TGTGCTCCAACAACAACTCCTAAGACTACAACAACTACACGTGCGCCAGTGACT--A----------------------------------------
droBia1 scf7180000301506:767760-767987 + CTCCTT------------GTGAGACAACAACCACTACCACTACG--------------------------ACAACAACCAC------------AACAACGA---CAACCACT------ACCACAA---CAACCA---C------------------------------------------TACGACAACAACCACGACAAC------AACTACAGAAA------AGCCACCATGTGAGCCAATTA------------------------------------------CCAC-----------------AACACC---------AACTCC------------------CTGTG------------------------GTAGAACCACTC--------------------------------------------CT---CCCCCAAAGGCT---------------------------------------------------------------------------------------------------------------------CCCTGCAGTCGCACCACAACTTCTACACCATCTTGCGAA---------------------------------CAGACAACAACACCG--G----------------------------------------
droTak1 scf7180000415870:311108-311338 + CTGAGG------------CTC---CAACAACCACTGAAGCTCCA--------------------------ACAACAACCACT---------GAGGCTCCAACAACAAC---T------GAGGAGCCAACAACAACCAC------------------------------------------TGAGGCTCCAACAACAACCACTGAGGCTTCA------ACAA---CAACCACTGAGGTTCCAACAA------------------------------------------CAACTGAGGAGCC--------AACAAC---------AACCACTGAGGCTC---------------------------------------CAACAACAA------------------------------------CCACTG-----AGGCTTCAACAACAACAACT---------------------------------------------------------------------------------------------------------------------------------------------------GAGGCT---------------------------------CCAACAACAACCACT--GAGGCTC----------------------------------
droEug1 scf7180000409692:151839-152051 + CTACAA------------C---GACAACTACCACAACCTGTGCC-----------------------CCAACAACAACC------------TCTACTACGACAACCAC---C------ACCACCA---CTACAA---C------------------------------------------TACAACTACCACCACAACCACTACTACAACG------ACGA---CTACCACATGTGCCCCAACAA------------------------------------------CAACGTCTACC--------------AC---------GACAACTAC---------------AAC---------------------------------------CACCACTA---------------------CTACTACTA-----CAACGACAACTACCACAACT---------------------------------------------------------------------------------------------------------------------------------------------------TGTGCC---------------------------------CCAACAACAACCTCT--A----------------------------------------
dm3 chr2R:5930434-5930627 - AAC----------------------AACAACCACCACAACTACG-----------------------ACAACAACA---ACT---------ACCACCACAACTAC---------------GACAA---CAACGA---C------------------------------------------ATGTTCCCCGACAACAACCACCACCACAACA------ACAA---CAACGACGACGACGACAACAA------------------------------------------CT-----------ACTAC---TACGACAAC------CACGACG---------------------A------CG---------------ACAACAACAA-----------------------------------------------CCACCACCACGACGACAACG---------------------------------------------------------------------------------------------------------------------------------------------------TGTACT---------------------------------CCAACGACGACCACC--A----------------------------------------
droSim2 3r:20734487-20734688 - CAACTT------------GTACCCCAACAACTACGACAACCACA-----------------------ACGACTACA---ACC---------ACTACAACGACAACAAC---T------TGTACCA---CAACA------------------------------------------------ACTACGACAA---------------------------------CCACAACCTGTACGCCAACAA------------------------------------------CGACGAGC-----------------AC---------AACAACTTGTACCACAAAAACGATCTCGA------C------------------CACT------------------------------------------AC--ATGCCCAGAAA---------------------------------------------------------------------------------------------------------------CCGCTCCGACAACCACCGCT------------------------------TGTCCT---------------------------------GACGTGACAACAAC--------------------------------------------
droSec2 scaffold_5:3027521-3027815 + CTAGAT------------GCACACCAACAACTTCTACTTGTGCCCCAACGACAAC--------TAC---TCCTAGA---------------TGCACTACAACAACTAC---C---------ACAA---GGCGCC---C---------------A---A---CGACAACTACTCCTACATGCACTACAAC------AA---------------------------CTTCCACTTGTGCCCCAACGACAACTACACCTAGATGCGCAACAACAA---------------CT-----------------------------------TCCACTTGTGCCCCAACGACAACT---------------------------ACTCCTAGAT------------GCATTACAACGACTTCCACATGTGCTCC-----------AACCACAACCACACCT---------------------------------------------------------------------------------------------------------------------------------------------------TGTCCA---------------------------------ACTACAACACCATCAAC--AAGTCCTACAAGAACAACACGTCGTCCTTG---------
droYak3 2L:18561205-18561500 - CACCTT------------GTGAGACGACCACAACTAC--------------------------------AACAACG---A------CCACCACAACAACGACGACCAC---------------------------------------------------------------------------CACAACAAC---------------------------------------------------GA------------------------------------------CA-----------ACCACCACAACAACAAC---------CACG---------------------A------CT---------------ACC---ACAACAA--------------------------------------------CAACCACGACGACAACAGCGTGTATACCAACAACGACAACCACTACTCCACAACAGCAACCTTGTAAGTCAGCCACCACCACCACCCCAAAACAGGCACCGTGCGAACCAACAA---CCACGTCAACACCCCCTCCCTGTGCTCGCAAAACCACCTCCCCACCACCGTGCGAA---------------------------------GAGACAACGACACCT--G-----------------------CCT---------GCAGA
droEre2 scaffold_4690:14008170-14008375 - AGCA-ACAA---------------CTACTGCAGCAACTACTACT--------------------------ACTGCT---------------GCAGCATATA---CTACTACT------GCTGCAG---CATCTA---G------------------------------------------TACTACTGCTGCAGCAACTAC------TGCTGCTGCAGCAA---CTACTACTACTGCAGCAACTA------------------------------------------CT-----------ACTGCTGCAGCAAC---------TACTACT---------------------G------C------------------TGCA------------------------------------------GC--AACTACTACTACTGCTGCAGCAACTACTACTGCA------------------------------------------------------------------------------------------------------------------------------------------GCAA------------------------------------CTGCAGCCACTACT--A----------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
CTCCAT------------GTGAAACAACAACTCCTCCATGTGTG-----------------------ACAACAACG---ACT---------TGTGTGACAACAACTAC---TTGTGTGACAACAA---CTACTT---G------------------------------------------TGTGACAAC------AACTCCTCCATGTGTG------ACAA---CAACGACTTGTGTGACAACAA------------------------------------------CTACTTGTGTG-----------ACAAC---------AACTAC------------------TTGTG------------------------TGACAACTACTA--------------------------------------------CTTGTGCGACAACAACTCCT---------------------------------------------------------------------------------------------------------------------------------------------------TGTCCT---------------------------------CCAGCAACAACTACCAA--AGGTC--GCAAACAGAATGTGTCGTCTGTGACTAATAGTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--GCAAACAGAATGTGTCGTCTGT..........2312.002000002
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--GCAAACAGAATGTGTCGTCT............2111.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTACCAA--AGGTC--GCAAACAGAATGTGT.................2911.001000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAATGTGTCGTCTGTGA........2011.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAACAACTCCT---------------------------------------------------------------------------------------------------------------------------------------------------TGTCCT---------------------------------CCA.......................................................2211.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAATGTGTCGTCTGT..........1811.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTACCAA--AGGTC--GCAAACAGA.......................2311.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAATGTGTCGTCTGTG.........1911.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACTACCAA--AGGTC--GCAAAC..........................2211.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAA--AGGTC--GCAAACAGAATGT...................2311.001100000
...........................................G-----------------------ACAACAACG---ACT---------TGTGTGACAACAACTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2920.501100000
................................................................................................................TGTGTGACAACAA---CTACTT---G------------------------------------------TGTGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.502200000
..................................................................................................................................................................................................................G------ACAA---CAACGACTTGTGTGACAACAA------------------------------------------CTA......................................................................................................................................................................................................................................................................................................................................................................................................................2920.501100000
...........................................................................................TGTGTGACAACAACTAC---TTGTGTGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.502200000
...................................CCATGTGTG-----------------------ACAACAACG---ACT---------TGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.501100000
..........................................................................................................................................................................................................CCATGTGTG------ACAA---CAACGACTTGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.501100000
........................................................................................................................................................................................................................................TGTGTGACAACAA------------------------------------------CTACTTGTGTG-----------AC.................................................................................................................................................................................................................................................................................................................................................................................................2640.502200000
...................................................................................................AACAACTAC---TTGTGTGACAACAA---CTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.501100000
................................................................................................................................................................................................................................................AACAA------------------------------------------CTACTTGTGTG-----------ACAAC---------AACTA................................................................................................................................................................................................................................................................................................................................................................................2620.501100000
....................................................................................................................................................................................................................................................................................................TGTGTG-----------ACAAC---------AACTAC------------------TTGTG------------------------TGAC............................................................................................................................................................................................................................................................................................................................2640.502200000
.....................................................................................................CAACTAC---TTGTGTGACAACAA---CT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.331100000
..........................................................................................................................CAA---CTACTT---G------------------------------------------TGTGACAAC------AACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.331100000
..................................................................................................................................................................................................................................................CAA------------------------------------------CTACTTGTGTG-----------ACAAC---------AACT.................................................................................................................................................................................................................................................................................................................................................................................2330.331100000
.................................................................................................................................................................................................................................................................................................ACTTGTGTG-----------ACAAC---------AACTAC------------------TT...........................................................................................................................................................................................................................................................................................................................................................2240.251100000
.....................................................................................................................................................................................................................................................................................................GTGTG-----------ACAAC---------AACTAC------------------TTGTG------------------------TG..............................................................................................................................................................................................................................................................................................................................2340.251100000
..........................................................................................................AC---TTGTGTGACAACAA---CTACTT---...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.251100000
..............................................................................................GTGACAACAACTAC---TTGTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.251100000
...........................................................................................................................................................................................................................................GTGACAACAA------------------------------------------CTACTTGTGT...............................................................................................................................................................................................................................................................................................................................................................................................................2040.251100000
.................................................................................................................GTGTGACAACAA---CTACTT---G------------------------------------------TGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.251100000
.......................................................................................................................................................................................................................................................................................................GTG-----------ACAAC---------AACTAC------------------TTGTG------------------------T...............................................................................................................................................................................................................................................................................................................................2040.251100000
...................................................................................................................GTGACAACAA---CTACTT---G------------------------------------------TGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.251100000
...............................................................................ACT---------TGTGTGACAACAACTAC---TT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.251100000
.........................................................................................................................................................................................................................................GTGTGACAACAA------------------------------------------CTACTTGTGTG-----------...................................................................................................................................................................................................................................................................................................................................................................................................2340.251100000
............................................................................................GTGTGACAACAACTAC---TTGTGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.251100000
.....................................................................................................................................................................................................................................ACTTGTGTGACAACAA------------------------------------------CTACTT...................................................................................................................................................................................................................................................................................................................................................................................................................2240.251100000
...................TGAAACAACAACTCCTCCATGTGTG-----------------------ACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2850.201100000
....AT------------GTGAAACAACAACTCCTCCATGTGTG-----------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2860.171100000
.....................AAACAACAACTCCTCCATGTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2270.141100000
......................AACAACAACTCCTCCATGTGTG-----------------------AC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.141100000
............................AACTCCTCCATGTGTG-----------------------ACAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.131100000
...................................................................................................................................................................................................AACTCCTCCATGTGTG------ACAA---........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.131100000
.....................AAACAACAACTCCTCCATGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.111100000
.......................................................................................................................................................................................GACAAC------AACTCCTCCATGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20130.081100000
.......................ACAACAACTCCTCCATGTGTG-----------------------A....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22140.071100000
........................................................................................................................................................................................ACAAC------AACTCCTCCATGTGTG------A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22140.071100000
.......................ACAACAACTCCTCCATGTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20140.071100000
........................................................................................................................................................................................ACAAC------AACTCCTCCATGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20140.071100000
.......................................................................................................................................................................................GACAAC------AACTCCTCCATGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19180.061100000
droVir3
CACCAA------------------CAACAACCACT---TGCACC-----------------------ACAACAACAACCACT---------ACTACAACAA---CAACAACT------ACTACAA---CAACCA---C------------------------------------------CACAACTACAACAACAACCTGCACCACACCC------ACAA---CAACCACTTGCACAACAACAA------------------------------------------CAACCACTACG-----------ACAAC---------AACCAC------------------CAC---------------------------TACA------------------------------------------AC--------AACCACTACTACAACAACC---------------------------------------------------------------------------------------------------------------------------------------------------ACTACT---------------------------------ACAACAACCACAACC-------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................CAACAA---CAACAACT------ACTACAA---CAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24120.081001000000000000000000000000000000000000000000000000000000000000
droGri2
CTGAGA------------------CAACTACCACTCCG--------------------------------ACAACTACCACTGAGACAACTACTACTCCGACAACTAC------------------------CA---C------------------TG---AGA------------------CAACTACCACTCC---GAC------AACTACAACAG------AGACAACTACCACTCCGACAA------------------------------------------CTACCACGGAG-----------ACAAC---------TACCACT---------------------C------------------------CGACAACTA-----------------------------------------------CCACTCCGACAACTACAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGAGACAACTACC--A----------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
AAGA-ACAG---------------CAACAACAACAACAACAAAA-----------ACAACAACTACT------------------------ACTACAACAACAAC---TACA------ACAACAA---CAACAA---C------------------------------------------TACAACAACAACAACAACCAC------AACAACAACAACAA---CAACAACAACAACAACAACTA------------------------------------CAACAAC--------------------AACAAC---------AACAACAAC------------------------------------------------------AACTACTACTA---------------------CTACAACAA-----CAACTACAACAACAACAACT---------------------------------------------------------------------------------------------------------------------------------------------------ACAACA---------------------------------ACAACAACAAACACA--A----------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................................CAACAACAACAACAACTA------------------------------------C..............................................................................................................................................................................................................................................................................................................................................................................................................................19200.15303000
.....................................................................................................................................................................................................................................................................................................................................CAACAAC------------------------------------------------------AACTACTACTA---------------------CT....................................................................................................................................................................................................................................................................................20200.05101000
dp5
CACCCT------------ATACCACAACAACAACACCCTGTACT-----------------------ACAACAACA---A------CACCCTGTACTACAACAACAACCTGC------GGCACAA---CACCCT---A------------------------------------------TACCACAACAACAACACCCTG------TACT------A---------------------CAACAA------------------------------------------CAACCTGCGGCAC--------AACAAC---------AGCACCCTGTACTACAACAACAACCTGCG------G------------------CACA------------------------------------------AC--ACCCTACACCACAACAACAACACCC---------------------------------------------------------------------------------------------------------------------------------------------------TGTACT---------------------------------ACAACAACAAC-----------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
CTCCAT------------GTACAACAACACCACCACCCTGTACT-----------------------ACACCAAGA---C------CCCCATGTACAACAACAAAGCC---------------AC---C---CT---G------------------TA---CTACACCAAGGCCTCCATGTACAACAACAACACCACCCTG------TACT------ACACCAAGACCCCCATGTACAACAACAA------------------------------------------GG-----------------------------CCACCCTGTACT---------------------------ACACCAAGGCCTCCATGTACAACAACAC-----------------------------------------------CAGCACCCTGTACTACACCA---------------------------------------------------------------------------------------------------------------------------------------------------AGGCCT---------------------------------CCATGTACAACAACA--A----------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................................ACT-----------------------ACACCAAGA---C------CCCCATGTACAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.331010000
................................................................................................................................................................................................................ACT------ACACCAAGACCCCCATGTACAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.331010000
droAna3
CTACTC------------GTAGACCAACAACAACAACAACAACC------ACAAC--------AAC---TCGTAGA---------------CCAACAACAA---CAACAACA------ACTACAA---CAACTC---G------------------------------------------TAGACCAACAACAACAACCAC------AACTACTCGTAGAC---CAACAACGACTACAACAACCA------------------------------------------CA-----------------------------------ACTAC------------------TCGTA------------------------AACCAACTACTACTACC------------------------------AC--------------TACTACTACTACT---------------------------------------------------------------------------------------------------------------------------------------------------ACTACC---------------------------------ACTACTACTACTCCCAAA----------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................AGA---------------CCAACAACAA---CAACAACA------AC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2370.141010000
....................AGACCAACAACAACAACAACAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2370.141010000
................................................................................................AACAA---CAACAACA------ACTACAA---C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21190.112020000
..................................................................................................CAA---CAACAACA------ACTACAA---C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.102020000
............................................................................................CAACAACAA---CAACAACA------ACTACAA---C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25110.091010000
.................................................................................................ACAA---CAACAACA------ACTACAA---C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
droBip1
CACCAC-AA---------------CGACAACCACCCCGACGACC-----------ACCACAACAACT------------------------ACTACGACAACCAC---------------GACAA---CAACCA---C------------------------------------------TACCACAACTACAACACCTTG------TGCC------C---------------------CTACAA------------------------CGACTTCCACTACAACGACA-----------ACCACTACAACAAC---------TACCACA---------------------A------CA---------------ACC---ACTACTA--------------------------------------------CAACCACCACGACAACACCT---------------------------------------------------------------------------------------------------------------------------------------------------TGTGCT---------------------------------CCGACAACGACTTCC--A----------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
AACA-ACAA---------------CTACAACAACAACAACGACT-----------ACAACAACAACA------------------------ACTACAACAACGAC---------------TACAA---CAACAA---C------------------------------------------G---ACTAC-----------------------------------------------------------------------------------------------------------------------AACAACAACGACGACAACCACT---------------------------ACAACAACCTGTTCGACAACC---ACAACA-----------------------------------------C---GAAAAC------------------------------------------------------------------------------------------CATCATGCAAGCCGAAGAAAACC------ACTCCCCCACCTTGCAAGTGCACAACAACCAATCCACCACCTTGCAAG---------------------------------CGCACAACAACCACT-------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CGCCAT------------GTGAAACGACAACTCCACCATGTGCG-----------------------ACGACAACG---A------CCACTGAAGCTCCAACGA------------------------------------------------------------------------------CAACAACAACAACAGTTTG------TGCT------C---------------------CAGTAA------------------------CAACGACCACTGAAGCCCC--------------------AACAACAACGACGACCACCACT---------------------------ACA------------------------------------G---------------------AAGCTCCAA-----CGACAACAACAACTGAAGCC---------------------------------------------------------------------------------------------------------------------------------------------------TGTGCT---------------------------------CCAACAACAACGACC--A----------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CGCCCT------------GTACAACAACACCACCACCGTGTACA-----------------------ACAACAACA---C------AACCTTGTACTACAACAACACC---------------GC------CGT---G------------------TA---CAACAACAACACCACCTTGTACAACAACACCACCACCGTG------TACA------ACAACAACACCACCTTGTACTACAACAA------------------------------------------CACC-----------------------------------GCCG---------------------TGTACAACATCACAACCACCGTGTACAACAACACCAC------------------------------------CAC--AGTGTACAACAACAACATCACCT---------------------------------------------------------------------------------------------------------------------------------------------------TGTACT---------------------------------ACAACA----CTACC--A----------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CAACAACCACGACGACAACCACCAAAAAGACCACAACT-----------------------------------------------------TGTGCTCCAACAACCAC---------------GA---CGACAA---CCACTAAAAAGACCACATCTTGTGCT------------------CCAACAACCACGAC---AAC------AACCACCAAAAAGA---CTACGACTTGTGCTCCAACAA------------------------------------------CCAC-----------------------------------GACA---------------------A------CA---------------ACC---ACCAAA---------A-----------------------------------AGTCCACAACAACAACCACT---------------------------------------------------------------------------------------------------------------------------------------------------TGTGCTCCAACAACAACTCCTAAGACTACAACAACTACACGTGCGCCAGTGACT--A----------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CTCCTT------------GTGAGACAACAACCACTACCACTACG--------------------------ACAACAACCAC------------AACAACGA---CAACCACT------ACCACAA---CAACCA---C------------------------------------------TACGACAACAACCACGACAAC------AACTACAGAAA------AGCCACCATGTGAGCCAATTA------------------------------------------CCAC-----------------AACACC---------AACTCC------------------CTGTG------------------------GTAGAACCACTC--------------------------------------------CT---CCCCCAAAGGCT---------------------------------------------------------------------------------------------------------------------CCCTGCAGTCGCACCACAACTTCTACACCATCTTGCGAA---------------------------------CAGACAACAACACCG--G----------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CTGAGG------------CTC---CAACAACCACTGAAGCTCCA--------------------------ACAACAACCACT---------GAGGCTCCAACAACAAC---T------GAGGAGCCAACAACAACCAC------------------------------------------TGAGGCTCCAACAACAACCACTGAGGCTTCA------ACAA---CAACCACTGAGGTTCCAACAA------------------------------------------CAACTGAGGAGCC--------AACAAC---------AACCACTGAGGCTC---------------------------------------CAACAACAA------------------------------------CCACTG-----AGGCTTCAACAACAACAACT---------------------------------------------------------------------------------------------------------------------------------------------------GAGGCT---------------------------------CCAACAACAACCACT--GAGGCTC----------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
CTACAA------------C---GACAACTACCACAACCTGTGCC-----------------------CCAACAACAACC------------TCTACTACGACAACCAC---C------ACCACCA---CTACAA---C------------------------------------------TACAACTACCACCACAACCACTACTACAACG------ACGA---CTACCACATGTGCCCCAACAA------------------------------------------CAACGTCTACC--------------AC---------GACAACTAC---------------AAC---------------------------------------CACCACTA---------------------CTACTACTA-----CAACGACAACTACCACAACT---------------------------------------------------------------------------------------------------------------------------------------------------TGTGCC---------------------------------CCAACAACAACCTCT--A----------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
AAC----------------------AACAACCACCACAACTACG-----------------------ACAACAACA---ACT---------ACCACCACAACTAC---------------GACAA---CAACGA---C------------------------------------------ATGTTCCCCGACAACAACCACCACCACAACA------ACAA---CAACGACGACGACGACAACAA------------------------------------------CT-----------ACTAC---TACGACAAC------CACGACG---------------------A------CG---------------ACAACAACAA-----------------------------------------------CCACCACCACGACGACAACG---------------------------------------------------------------------------------------------------------------------------------------------------TGTACT---------------------------------CCAACGACGACCACC--A----------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAACG---------------------------------------------------------------------------------------------------------------------------------------------------TGTACT---------------------------------CCAACGA...................................................2123.5070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................A---CAACGA---C------------------------------------------ATGTTCCCCGACAACAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................CGA---C------------------------------------------ATGTTCCCCGACAACAACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACG---------------------------------------------------------------------------------------------------------------------------------------------------TGTACT---------------------------------CCAACGAC..................................................2021.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................ACGACAACAA------------------------------------------CT-----------ACTAC---TACGACAAC------CA...................................................................................................................................................................................................................................................................................................................................................................................2821.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................T---------ACCACCACAACTAC---------------GACAA---CAACGA---C------------------------------------------A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAACG---------------------------------------------------------------------------------------------------------------------------------------------------TGTACT---------------------------------CCAACGAC..................................................2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................T---------ACCACCACAACTAC---------------GACAA---CAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACG---------------------------------------------------------------------------------------------------------------------------------------------------TGTACT---------------------------------CCAACGACGACCAC............................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................AACGACGACGACGACAACAA------------------------------------------CT-----------............................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................CGACAACAA------------------------------------------CT-----------ACTAC---TACGA...............................................................................................................................................................................................................................................................................................................................................................................................2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................AACAA-----------------------------------------------CCACCACCACGACGAC........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................CGACGACGACGACAACAA------------------------------------------CT-----------ACTAC---TA..................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................ACAA---CAACGACGACGACGACAACAA------------------------------------------TC-----------............................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTACT---------------------------------CCAACGACGACC..............................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG---------------------------------------------------------------------------------------------------------------------------------------------------TGTACT---------------------------------CCAACGACGACC..............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................CACAACA------ACAA---CAACGACGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................ACGACGACGACGACAACAA------------------------------------------CT-----------ACTAC---....................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................AACA------ACAA---CAACGACGACGACG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................CAACAACA---ACT---------ACCACCACAACTAC---------------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................G-----------------------ACAACAACA---ACT---------ACCACCACAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................A---CAACGACGACGACGACAACAA------------------------------------------CT-----------ACT.........................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................AACA------ACAA---CAACGACGACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................AACAA------------------------------------------CT-----------ACTAC---TACGAC..............................................................................................................................................................................................................................................................................................................................................................................................1830.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................CGACAACAA------------------------------------------CT-----------ACTAC---TACGACAA............................................................................................................................................................................................................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................AC---TACGACAAC------CACGACG---------------------A------CG---------------AC...............................................................................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACG---------------------------------------------------------------------------------------------------------------------------------------------------TGTACT---------------------------------CCAACGACGAC...............................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................C---TACGACAAC------CACGACG---------------------A------CG---------------ACAACA...........................................................................................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................A------ACAA---CAACGACGACGACGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................CACAACA------ACAA---CAACGACG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...............................CACCACAACTACG-----------------------ACAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................A------------------------------------------CT-----------ACTAC---TACGACAAC------CACGACG---------------------.........................................................................................................................................................................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................AA------------------------------------------CT-----------ACTAC---TACGACAAC------CACGACG---------------------A------..................................................................................................................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGACAACG---------------------------------------------------------------------------------------------------------------------------------------------------TGTACT---------------------------------CCAACGAC..................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................T-----------ACTAC---TACGACAAC------CACGACG---------------------A------C.................................................................................................................................................................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACG---------------------------------------------------------------------------------------------------------------------------------------------------TGTACT---------------------------------CCAACG....................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................CACGACG---------------------A------CG---------------ACAACAAC.........................................................................................................................................................................................................................................................................................................................1840.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................CGACGACAACAA------------------------------------------CT-----------ACTAC---TAC.................................................................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................CTAC---TACGACAAC------CACGACG---------------------A------C.................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAACG---------------------------------------------------------------------------------------------------------------------------------------------------TGTACT---------------------------------CCAACGT...................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................CGACAACAA------------------------------------------CT-----------ACTAC---TACGACA.............................................................................................................................................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACCACGACGACAACG---------------------------------------------------------------------------------------------------------------------------------------------------TGTA.............................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................ACTAC---TACGACAAC------CACGACG---------------------A------CG---------------ACA..............................................................................................................................................................................................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................CACCACAACTAC---------------GACAA---C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TACGACAAC------CACGACG---------------------A------CG---------------ACAAC............................................................................................................................................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACG---------------------------------------------------------------------------------------------------------------------------------------------------TGTACT---------------------------------CCAACGACG.................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGACAACG---------------------------------------------------------------------------------------------------------------------------------------------------TGTACT---------------------------------CCAACG....................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGACGACAACG---------------------------------------------------------------------------------------------------------------------------------------------------TGTACT---------------------------------CCAACGACG.................................................2820.5010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................CGACAACAA------------------------------------------CT-----------ACTAC---TACGAC..............................................................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................CGACGACAACAA------------------------------------------CT-----------ACTAC---TACGACAAC------.....................................................................................................................................................................................................................................................................................................................................................................................2820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................GACGACAACAA------------------------------------------CT-----------ACTAC---TAC.................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TACGACAAC------CACGACG---------------------A------CG---------------ACAACAA..........................................................................................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................ACAA---CAACGACGACGACGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................CAACTAC---------------GACAA---CAACGA---...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................A------------------------------------------CT-----------ACTAC---TACGACAAC------C....................................................................................................................................................................................................................................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................A------------------------------------------CT-----------ACTAC---TACGACAAC------CAC..................................................................................................................................................................................................................................................................................................................................................................................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................AA------------------------------------------CT-----------ACTAC---TACGACAAC------CACGA................................................................................................................................................................................................................................................................................................................................................................................2330.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................ACAACA------ACAA---CAACGACGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................CAACAACAA-----------------------------------------------CCACCACCA...............................................................................................................................................................................................................................................................1850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CAACTT------------GTACCCCAACAACTACGACAACCACA-----------------------ACGACTACA---ACC---------ACTACAACGACAACAAC---T------TGTACCA---CAACA------------------------------------------------ACTACGACAA---------------------------------CCACAACCTGTACGCCAACAA------------------------------------------CGACGAGC-----------------AC---------AACAACTTGTACCACAAAAACGATCTCGA------C------------------CACT------------------------------------------AC--ATGCCCAGAAA---------------------------------------------------------------------------------------------------------------CCGCTCCGACAACCACCGCT------------------------------TGTCCT---------------------------------GACGTGACAACAAC--------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
CTAGAT------------GCACACCAACAACTTCTACTTGTGCCCCAACGACAAC--------TAC---TCCTAGA---------------TGCACTACAACAACTAC---C---------ACAA---GGCGCC---C---------------A---A---CGACAACTACTCCTACATGCACTACAAC------AA---------------------------CTTCCACTTGTGCCCCAACGACAACTACACCTAGATGCGCAACAACAA---------------CT-----------------------------------TCCACTTGTGCCCCAACGACAACT---------------------------ACTCCTAGAT------------GCATTACAACGACTTCCACATGTGCTCC-----------AACCACAACCACACCT---------------------------------------------------------------------------------------------------------------------------------------------------TGTCCA---------------------------------ACTACAACACCATCAAC--AAGTCCTACAAGAACAACACGTCGTCCTTG---------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
CACCTT------------GTGAGACGACCACAACTAC--------------------------------AACAACG---A------CCACCACAACAACGACGACCAC---------------------------------------------------------------------------CACAACAAC---------------------------------------------------GA------------------------------------------CA-----------ACCACCACAACAACAAC---------CACG---------------------A------CT---------------ACC---ACAACAA--------------------------------------------CAACCACGACGACAACAGCGTGTATACCAACAACGACAACCACTACTCCACAACAGCAACCTTGTAAGTCAGCCACCACCACCACCCCAAAACAGGCACCGTGCGAACCAACAA---CCACGTCAACACCCCCTCCCTGTGCTCGCAAAACCACCTCCCCACCACCGTGCGAA---------------------------------GAGACAACGACACCT--G-----------------------CCT---------GCAGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................AACAA--------------------------------------------CAACCACGACGACAACAGCGT...................................................................................................................................................................................................................................................2616.00600000060000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCACCACCGTGCGAA---------------------------------GA........................................................1913.00302000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCACGACGACAACAGCGT...................................................................................................................................................................................................................................................2012.00200000020000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACCTTGTAAGTC..................................................................................................................................................................................................1911.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................AACAA--------------------------------------------CAACCACGACGACAACAG......................................................................................................................................................................................................................................................2311.00100000010000
..........................................................................................................................................................................................................................................................................................................................AAC---------CACG---------------------A------CT---------------ACC---ACAACAA--------------------------------------------C.......................................................................................................................................................................................................................................................................2111.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCCCAAAACAGGCACCGTG.................................................................................................................................................................2111.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACCTTGTAAGTCAGCCACCACC........................................................................................................................................................................................2911.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAACACCCCCTCCCTGTGCT.........................................................................................................................2211.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTGTATACCAACAACGA....................................................................................................................................................................................................................................2011.00100001000000
........................................................................................................................................................................................................................................................................................................................................................................................CC---ACAACAA--------------------------------------------CAACCACGACGACAA.........................................................................................................................................................................................................................................................2411.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACACCCCCTCCCTGTGCT.........................................................................................................................2011.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAA---------------------------------GAGACAACGACACCT--.........................................1811.00110000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAACCAACAA---CCACGTCAA..........................................................................................................................................2111.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................A--------------------------------------------CAACCACGACGACAACAGCGT...................................................................................................................................................................................................................................................2211.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCCCACCACCGTGCGAA---------------------------------GA........................................................2111.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACCACGACGACAACAGCG....................................................................................................................................................................................................................................................2011.00100000010000
.........................................................................................................................................................................................................................................................................................................................................G---------------------A------CT---------------ACC---ACAACAA--------------------------------------------CAACCACGACGA............................................................................................................................................................................................................................................................2611.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................CAACAA--------------------------------------------CAACCACGACGACAACAGCGT...................................................................................................................................................................................................................................................2711.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAACAGCGTGTATACCAACAAC......................................................................................................................................................................................................................................2411.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................AA--------------------------------------------CAACCACGACGACAACAGCGTGT.................................................................................................................................................................................................................................................2511.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCCTGTGCTCGCAAAACCACCT............................................................................................................2411.00110000000000
.............................................................................................................................................................................................................................................................................................................................................................................................ACAACAA--------------------------------------------CAACCACGACGACAACAGCGT...................................................................................................................................................................................................................................................2811.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCCAAAACAGGCACCGTGCGA..............................................................................................................................................................2311.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAACAGCGTGTATACCAA..........................................................................................................................................................................................................................................2011.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................AA--------------------------------------------CAACCACGACGACAACAGCGT...................................................................................................................................................................................................................................................2311.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACCTTGTAAGTCAGCCAC............................................................................................................................................................................................2111.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................ACAA--------------------------------------------CAACCACGACGACAACAGCGT...................................................................................................................................................................................................................................................2511.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACCACCTCCCCACCACCGTGCGAA---------------------------------GAG.......................................................3011.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTCCCCACCACCGTGCGAA---------------------------------GA........................................................2311.00100000010000
.......................................................................................................ACCAC---------------------------------------------------------------------------CACAACAAC---------------------------------------------------GA------------------------------------------CA-----------ACCACCA.....................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGACAACAGCGTGTATACCAAC.........................................................................................................................................................................................................................................2411.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................AA--------------------------------------------CAACCACGACGACAACA.......................................................................................................................................................................................................................................................1920.50100000100000
droEre2
AGCA-ACAA---------------CTACTGCAGCAACTACTACT--------------------------ACTGCT---------------GCAGCATATA---CTACTACT------GCTGCAG---CATCTA---G------------------------------------------TACTACTGCTGCAGCAACTAC------TGCTGCTGCAGCAA---CTACTACTACTGCAGCAACTA------------------------------------------CT-----------ACTGCTGCAGCAAC---------TACTACT---------------------G------C------------------TGCA------------------------------------------GC--AACTACTACTACTGCTGCAGCAACTACTACTGCA------------------------------------------------------------------------------------------------------------------------------------------GCAA------------------------------------CTGCAGCCACTACT--A----------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/17/2015 at 11:21 PM