ID:

dmo_892

 Coordinate:

scaffold_6482:2636529-2636679 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-35.6 -35.3 -35.3

Flybase annnotation

exon [dmoj_GLEANR_14748:2]; CDS [Dmoj\GI14288-cds]; intron [Dmoj\GI14288-in]

Repeatable elements

NameClassFamilyStrand
Homo6DNAhAT-Pegasus+
mature
  1. scaffold_3586:55-81 +
  2. scaffold_6473:14769926-14769952 -
  3. scaffold_6482:1398155-1398181 -
  4. dmo_892  scaffold_6482:2636612-2636638 -
  5. scaffold_6496:13568709-13568735 +
  6. scaffold_6498:1882845-1882871 +
  7. scaffold_6498:2304806-2304832 -
  8. scaffold_6500:26389990-26390016 -
  9. scaffold_6500:29723973-29723999 -
  10. scaffold_6540:27509594-27509620 +
  11. scaffold_6540:33414557-33414583 +
  12. scaffold_6680:23125840-23125866 +
  13. scaffold_6680:24149967-24149993 +
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TCACCCTGATCAAGAATATATATACCTTGTGGGGTCTGCCACTCCTCCTAATGGTTTTGTTGAAATGTATTTCAACAAAACCATTATATCCTGATTTCCCGTTTTCAATGGGTTCAGGGTTTAAAAATATCGCACGACATGCTACAATATATATTGATGATTATTAAGAAGTAGACTAACTAAATTATCATACCTTCACAGACAAGTGCTGACGGATCCGGAAAAAAAGTATCCCGATCTGCCCTATACGT
**************************************************(((((((((((((((....)))))))))))))))...(((((((...((((((...)))))).)))))))...........(((.....)))............((((((((....................))))))))...........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M060
embryo
 M046
female body
 V056
head
 V110
male body
.........................CTTGTGGGGTCTGCCACTCCTCCT.......................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0
..................................................................GTATTCCAACAAGACCATAAT.................................................................................................................................................................... 21 3 4 0.25 1 0 1 0 0
...........................................................................................TGATTTCCCGTTTTCAATGGGTTCAGG..................................................................................................................................... 27 0 13 0.23 3 0 3 0 0
...........................................................................................TGATTTCCCGTTTTCAATGGGTT......................................................................................................................................... 23 0 14 0.21 3 0 3 0 0
..................TATATACCTTGTGGGGTCTGC.................................................................................................................................................................................................................... 21 0 20 0.20 4 3 1 0 0
.........................................................................................................................................................................................................ACAAGAGCTGACAGATCAGG.............................. 20 3 7 0.14 1 0 0 1 0
...........................................................................................TGATTTCCCGTTTTCAATGGGTTC........................................................................................................................................ 24 0 14 0.07 1 0 1 0 0
..................................................................................................CCGTTTTCAATGGGTTCAGGG.................................................................................................................................... 21 0 14 0.07 1 0 1 0 0
.............................................................................................ATTTCCCGTTTTCAATGGGTT......................................................................................................................................... 21 0 14 0.07 1 0 1 0 0
..........................TTGTGGGGTCTGCCACTCCTCCC.......................................................................................................................................................................................................... 23 1 16 0.06 1 1 0 0 0
.........TCAAGAATATATATACCTTGTGGGG......................................................................................................................................................................................................................... 25 0 17 0.06 1 0 1 0 0
...........................................................................................TGATTTCCCGTTTTCAATGGGTTCAGGC.................................................................................................................................... 28 1 17 0.06 1 0 1 0 0
TCACCCTGATCAAGACTATATACACC................................................................................................................................................................................................................................. 26 2 18 0.06 1 1 0 0 0
....................................................................................................GTTTTCAATGGGTTCAGGGT................................................................................................................................... 20 0 18 0.06 1 0 0 0 1
..............AATATATATACCTTGTGGGGT........................................................................................................................................................................................................................ 21 0 20 0.05 1 0 1 0 0
........ATCAAGAATATATATACCTTG.............................................................................................................................................................................................................................. 21 0 20 0.05 1 0 1 0 0

Anti-sense strand reads

AGTGGGACTAGTTCTTATATATATGGAACACCCCAGACGGTGAGGAGGATTACCAAAACAACTTTACATAAAGTTGTTTTGGTAATATAGGACTAAAGGGCAAAAGTTACCCAAGTCCCAAATTTTTATAGCGTGCTGTACGATGTTATATATAACTACTAATAATTCTTCATCTGATTGATTTAATAGTATGGAAGTGTCTGTTCACGACTGCCTAGGCCTTTTTTTCATAGGGCTAGACGGGATATGCA
**************************************************(((((((((((((((....)))))))))))))))...(((((((...((((((...)))))).)))))))...........(((.....)))............((((((((....................))))))))...........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V056
head
.........AGTTCTTATATATATGGAACACCCCA........................................................................................................................................................................................................................ 26 0 17 0.12 2 1 1 0
...........................ACACCCCAGAGGGGGAGGA............................................................................................................................................................................................................. 19 2 20 0.10 2 2 0 0
.......................................................................................................................................CTGTACGATGTTTTATGCAA................................................................................................ 20 3 17 0.06 1 1 0 0
..........GTTCTTATATATATGGAACACCCCA........................................................................................................................................................................................................................ 25 0 17 0.06 1 0 1 0
.......CTAGTTCTTATATATATGGAACACCCCA........................................................................................................................................................................................................................ 28 0 17 0.06 1 1 0 0
.......CTAGTTCTTATATATGTGGAACACCCCA........................................................................................................................................................................................................................ 28 1 20 0.05 1 0 1 0
...........................ACACCCCAGAGGGGGAGGACG........................................................................................................................................................................................................... 21 3 20 0.05 1 0 1 0
..........................CACACCCCAGAGGGGGAGGA............................................................................................................................................................................................................. 20 3 20 0.05 1 0 0 1
......TCTAGTTCTTATGTATATGGAACACCCCA........................................................................................................................................................................................................................ 29 2 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6482:2636479-2636729 - dmo_892 TCACCCTGATCAAGAATATATATACCTTGTGGGGTCTGCCAC-TCCTCCTAATGGTTTTGTTGAAATGTATT-------TCAACAAAACCATTATATCCTGA-TTTCCCGTTTTCAATGGGTTCAGGGTTTAAAAATATCG------------CACGA-----------------------------------C------------------ATGCTAC---------------A-----------------------------A--------------------------T------ATATATTGAT----------GATT-----------ATTA-----------------------------AGAAG---------------------------------TAGACTAACTAAATTA--------------------------------------------------------TCA-------------------------------TACCTTCACA-----------------------------------------------------GACAAGTGCTGA---------------------------------------------------CG-GATCCG--GAA-----AAAA-AGTATCCCGATCTGCCCTATA---CGT
droVir3 scaffold_13324:1939266-1939477 - TGATGCTGATCAAGAGTATATATACTTTATGGGGTCGGAGGT-GCTTCCTTCTGCC--TGTTA-CATACATTTGGATTTCGCACAAATTCAATATACCCTTA-TA-CCCATTTTTAATGGGTTCAGGGTATAAATAATATA------------A------------------------------------------------------------------------------------------------------TA------------------------------------------ATATTAATCATA-ATAAAAACAATTA--AAT--------------------------------------AA---------------------------------AAG--------AAGA-----------------------------------------------------------------------------A-------------TAC--------------------------------------------------------------------------------------TCCCGTCGCAGATCCGCG-------CAA---------TG------------------------------------ATTCGCAA---AA
droGri2 scaffold_14822:789567-789788 - -----CTAATATCGAATTTATATACTTTATAGGGTCGGGGAT-GCTTTCTTCTGCC--TGTTA-CAG----T-------TGCACAAAACCATTATAACCTTTATA-CTCATTTTTAATGGGCTCTGGGTATAAAAATAAAA------------T---A-----------------------------------TAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTTAAA------------------------------------------------------------------------TTCAATA-------------TATTTATGTAGATATTTAAGCTATTCTGCCTTTACATACATTA-------------------------TTATTAA---------------------------------------------------TA-TTATTG--GGG-----AAGT-TGCACCCCGA------------CTTG-
droWil2 scf2_1100000004909:1149182-1149409 - TGATCCTGATCAAGAATATATATACTTTGTGGGGTCGGAGAT-GCTTCCTTCTGCC--TGTTA-CATACATT-------TTGGCGACTTTAATATACCATTT-CA-CCC------TATGGGTGTATGGTATAATGAGATGC------------GTGCC-----------------------------------TA-------------------ACTAC---------------A-------GAACT------C--GA----------------------------CGGCAT----------------------------TT----TTCAAAG-------T--GTCGACGTGGCTCTGTTGTTAGT--------------------------------------------------------------------------------------------------------------------------------------------G-----TGATCACA-----------------------------------------------------GACATGCGTTCA--------------TC-GTTCTG-----------------------------------------------------------CGATCTGTGTCAGAC---TG
dp5 Unknown_group_103:1180-1418 - TGATGCTGATCAAGAATATATATACTTTATGGTGTCGGAAAC-GATTCCTTCTGGA--CGTTA-CACACATCCACTTTTACCACAAATCTAATATACCCCAA-TA-CTCAT----TTTGAGTATCGGGTATAAAAAGAATT------------ACGACAATACATATCACTCTATAACTTGTTTCG-------AAAAT-----ATACTATTA-----------------------------------------------------------------AAAAAATATTGTCT--------------------------------TTGATAGG---------A--GCTGA---AGCTTCAGAAGAAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATA---------CGAATTGTTCCGT-----AC
droPer2 scaffold_7407:832-1068 - TGATGCTGATCAAGAATATATATACTTTATAGGGTCGGAAAC-GATTCCTTCTGGA--CGTTA-CACACATCCACTTTTACCACAAATCTAATATACCCCAA-TA-CTCAT----TTTGAGTATCGGGTATAAAAACTACG------------AAAAA-----------------------------------T---------ATACAATTA--ACTAC---------------A-------GA--------------------------------------------------------------------------------------------------------------------------AAAAC---------------------------------TACATTAATTT------------------------------------------------------------------------------------------------------------------------------ACA-AAAACTTATTTCTAATA------TCACAGGCAAGTAACTA---------------------------------------------------AA-ACTATG--GAC-----AAAC-TATC--------TACGG----ATATGC
droAna3 scaffold_13079:469911-470129 + TGATCCTGATCAAGAATATATATACTTTATAGGGTCGGAGAT-GTCTCCTTCACTG--CGTTG-CACACTTT-------TGACCAAAATTATAATACCCTCT--------------GC-----AAGGGTATAAAGAGAACA------------AAGCA-----------------------------------CAC------------------------------------------------------------AAACAACAA--------------------------T---------TATTAAT---------AGACAATAA--AAT----AG-----------------------------TAGAACCGTC----------------------------TGTA--------------------------------------------------------------------TCA-------------------------------GCCT---------------------------ATA-ACAGCCCA-------------------------CTGTTATTAGTTCCGAAGAAATCACTTCCC-----------------------------------------------------------GGA------------TCTG-
droBip1 scf7180000395310:31592-31822 - TGATCCTGATCAAGAATATATATACTTTATAGGGTCGGAGATAGGGTCCTTCACTG--CGTTG-CACACTTT-------TGGACAAAATTATAATACCCTCT--------------GA-----AAGGGTATAAGGAGGTATTAAAATATATTAC-TGA------------TATGTCAATTGGTC---------------------------------------------------------TAT---------------------------------------------------------TATTAAA----------GACCATTA--AAG--------------------------------------AA---------------------------------AAGAGTATGTTA-----------------------------------------------------------------GATATTGTA-----TATACATACGTATGTCTACA----------------------------------------------------------------------------------------------GGTCAGT---------------------------------------AAA-CC--------ATCTGTACTAC-----AC
droKik1 scf7180000302626:408339-408547 + TGATGCTGATCAAGAATATATATACTTTATAGGGTCGGAAAC-GTCTCCTTCACTG--CGTTG-CAAACTTC-------TGACTGAAATTATAATACCCTGC---------------------AAGGGTATAATAAACTAA------------TTGCC-----------------------------------TAAA----------------------------------------------------------------------------------------------T------ATATATTTAA------------------------------------------------------------------------------------------------------------------------------------AATATTATTTGGAAACATTTTGAAATACTTTAT--------------------------------------------------------------------------------------------------------------------------------CCTTCAAAGTTCAGTG-------CAAAATCAAAAG--------------------AA-TC--------ATCTACAGAAAA---CGT
droFic1 scf7180000454072:1931357-1931575 + TGATGCTTATCAAGAATATATATACTTTATGGGGTCTGAGGT-GTCTCCTTCACTG--CGTTG-CAAACTTC-------TGGCCAAAATTATAATACCCT-T-TG-CTC------TGC-----AAGGGTATAAAAATGCCG------------TAATA-----------------------------------TGAA---------------ATG--------------TTTATAT----TATT---------------------------------------------------------TATAAAT--------------------------------------------------------------------------------------------------------------------------------------AAAGTTCTTTATAAAGT-------------------------------------------ACGCATATAATAA--------------------------------------TGTG-----ATAATGTGACATGATTCTGA------------------------------------------------------CGCGTGCTG--GGA-----ATA----------------------AA---GT
droEle1 scf7180000488517:5249-5449 + TGATGCTGAGCAAGAATATATATATA-----TTGTCGGAAAT-GTCTCCTTCACTG--CGTTG-CAAACTTC-------TGAATGAAATAATAATACCCTCT--------------GC-----ATGGGTATAAAGATCTAC------------AT-------------------------------------------------------------------------------------TATC---------TAACA------ATT---------------------------------CCTGCAGC---T-----------ATAACAGT---------A--AC---------------------AGAAG---------------------------------CAGAATAAGAA------------------------------------------------------------------GATATAGAATCAGA----TATAAGTGTGCCA------------------------------------------------------------------------------------------------------------------------------------G--ACGTAAAAAAA-AC-----------------AT-----AT
droRho1 scf7180000768277:268-497 + TGATCCTGATCAAGAATATATATACTTTATAGGGTCGGAAAC-GCTTCCTTCTAGC--TGTTA-CATACTTT-------TGCACGAATACAATATACCCTTT-TA-CTC------TACGAGTAACGAGTATAAATATATAC------------A--GA-----------------------------------G------------------AGCCTACAATTAAATATTGAATACTCGTTTCT---TATCAATAAGA------AGCCTAAGAGCTAAAAAAACAACAACA--------------------------------TTGATAAG---------A--AACGACTTAGCCCGAAAATAAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT
droBia1 scf7180000302291:718139-718334 - TGACGCTGATCAGGAATATATATACTTTATGGGGTCTGAAAC-GTTTCCTTCACTG--CGTTG-CAAACTTC-------TGGCTAAAATCATTATATCCTCT--------------GC-----AAGGGTATAAATATCGGA------------AAAAC-----------------------------------T-----------------------AA---------------A-----------------------------A--------------------------G------GATTGCTTAC----------CACT-----------TTTA-----------------------------AAACC---------------------------------TACATTAGTTTAAACA--------------------------------------------------------------------------ATA-------------TACCTGCGTA-----------------------------------------------------GACAATT---------------------------------AGTG-------------------------------------------------------TTCGA----TTTTGA
droTak1 scf7180000415399:2659-2896 - TGACCCTGATCCAAAATATATATACTTTATGGGGTCGGAAAC-GCTTCCTTCTAGC--TGTTA-CATACTTC-------TGCACGAATACAATATACCCTTT-TA-CTC------CACGAGTAACGGGTATACAAATAATG------------AAAAC-----------------------------------CGAAATT-----------------------------TCATTAT----AGT---------------------------------------------------------CTCTCTAC---TAT-----------------------GTAAAT-----------------------AAAAA---------------------------------TTGA--AA---------------------------------------------------------------------------------------TCCATATCTTCAAAAT-------------------------------------------------------------------------------------------------AAGAGTTTATTCCAAAAAAAAAGC--------------------AA-TT-AATCTTAATGTGCACTGTG---TGC
droEug1 scf7180000409759:149612-149830 + TCATCCTGATTAAGAATATATATACTTTATAGGGTCGGAAAC-GCTTCCTTCTACC--TGTTA-CATACTTT-------TCAACGAATCTAGTATACCCTTT-TA-CTT------TACGAGTAACGGGTATAAAAATTCAG------------TAAAC-----------------------------------G---------AAAC---------------------------A-----------------------------A--------------------------T---------TATTTTA------------------------------------------------------------AAG---------------------------------TAATATAACTCAAGT------------------------------------------------------------------------------------------------------------AAACTAATA-------------AATATTAA------------------------------------------TCACTTCCAGAATCAGTGTTTGT--------------TG-GTGCTGAGGAA-----AA-----------------------AA---AG
dm3 chrX:22331934-22332161 + TGATCCAAATCAAGAATATACATACTTTATATAGTCAGAAAC-GCTTCCTTTTGCC--TGTTA-CATACTTT--------CAACGAATCTAGTATATCCTTT-TT-CTC------TACGAGTAACGGGTATAAAATGGTTA------------AAATT-----------------------------------CCGGCGTGCAATGC---------------------------A-----------------------------A--------------------------T------GTATTTCTAT----------G-TT-----------TTTG-----------------------------AAAAA---------------------------------CATTCCAAGCCAAATT--------------------------------------------------------------------------ATA-------------TGCACTCGC----------------------------------------------------------------------------------------GGGA-------------------------TG-GCTCTATAAAA-----ATAA-AATTTTTCAA------------TGTG-
droSim2 4:765725-765984 - dsi_2524 TGATCCTGATCAAGAATATATATACTTTATATAATCGGAAAC-GCTTCCTTCTGAC--TGTTA-CATACTTT-------TCAACGAGTCTAGTATACCCTTT-TA-CTC------TACGAATAACGGGTATAACAATAACT---------------------------------------------------------------------------------------------------------------------------------------------------------------GTAATTAC----------CGCT--------------A-----------------------------AGTGT-----TGCACTTCCTTTTGCGGACTGATAGGTATAAAGATAATTAAT--ACCCTAGAATTTATATTTTAA----------------------------------------------------------------------AGAT------------AAGCTAATC-------------ATTATTTATGGTA------CATTTGCAGAGTAATGA---------------------------------------------------TG-GAACTG--GAA-----AA-----------------------------A
droSec2 scaffold_8:2530187-2530368 + TGATTCTGATCAAGAATATATATATTTTATATGGTCGGAAAC-GCTTCCTTCTGCC--TGTTA-CATACTTT-------TCAACGAATCTAGTATACCCTTT-TA-CTC------TGTGAGTAACGGGTATAAATACCATA------------GAAGC-----------------------------------C--------------------------------------------------------------AA----------------------------CCGAATTCTACTAATCGATTAT----------TATT-----------ATTG-----------------------------AAAAG---------------------------------TGGTTCAATTGAGGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT
droYak3 v2_chrUn_004:252641-252878 - TGATCCTGATCAAGAATATATATACTTTATATGGTCGGAAAC-GCTTCCTTCTGCC--TGTTA-CATACTTT-------TCAACGAATCTAGTATACCCTTT-TA-CTC------TACGAGTAACGGGTATAAAAACCGTA------------AAGGA-----------------------------------TAAATAT-----------------------------CCAATGC----CAAA---------------------------------------------------------TATCAAC--------------------------------------------------------------------------------------------------------------------------------------GATGTTCTAGACAGAATTGGAAGAGCCAAATATTTCACAGCTTTAGAT-----TTGACAAGCGGATACCACCA---------------------------------------------------------------------------------------------------------------------------------G--GTG-----AAAA-TG------------AACCCC-----AA
droEre2 scaffold_4820:5975228-5975431 + TGATCCTGATCAAGAATATATATACTTTATATGGTCGGAAAC-GCTTCCTTCTGCC--TGTTA-CATACTTT-------TCAACGAATCTAGTATACCCTTT-TA-CTC------TAGGAGTAACGGGTATAACTATTGTT------------------------------------------CCGGGTAATATAAA---------------AT--------------------------------------------------------------------------------------GT----------AT-----------------------GCAAAA-----------------------AGAAG---------------------------------CAGA--AA---------------------------------------------------------------------------------------GCTAAGTTTTCCAACTGGACA-----------------------------------------------------GGAAATTGATTT---------------------------------------------------TG-GTTCTG--GAA-----A-------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
TCACCCTGATCAAGAATATATATACCTTGTGGGGTCTGCCAC-TCCTCCTAATGGTTTTGTTGAAATGTATT-------TCAACAAAACCATTATATCCTGA-TTTCCCGTTTTCAATGGGTTCAGGGTTTAAAAATATCG------------CACGA-----------------------------------C------------------ATGCTAC---------------A-----------------------------A--------------------------T------ATATATTGAT----------GATT-----------ATTA-----------------------------AGAAG---------------------------------TAGACTAACTAAATTA--------------------------------------------------------TCA-------------------------------TACCTTCACA-----------------------------------------------------GACAAGTGCTGA---------------------------------------------------CG-GATCCG--GAA-----AAAA-AGTATCCCGATCTGCCCTATA---CGTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................CTTGTGGGGTCTGCCAC-TCCTCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
...................................................................................................TGA-TTTCCCGTTTTCAATGGGTTCAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27130.233300000
...................................................................................................TGA-TTTCCCGTTTTCAATGGGTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23140.213300000
..................TATATACCTTGTGGGGTCTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.204100030
...................................................................................................TGA-TTTCCCGTTTTCAATGGGTTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24140.071100000
...........................................................................................................CCGTTTTCAATGGGTTCAGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21140.071100000
.....................................................................................................A-TTTCCCGTTTTCAATGGGTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21140.071100000
..........................TTGTGGGGTCTGCCAC-TCCTCCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23160.061000010
.........TCAAGAATATATATACCTTGTGGGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25170.061100000
...................................................................................................TGA-TTTCCCGTTTTCAATGGGTTCAGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28170.061100000
.............................................................................................................GTTTTCAATGGGTTCAGGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20180.061000001
..............AATATATATACCTTGTGGGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
........ATCAAGAATATATATACCTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
droVir3
TGATGCTGATCAAGAGTATATATACTTTATGGGGTCGGAGGT-GCTTCCTTCTGCC--TGTTA-CATACATTTGGATTTCGCACAAATTCAATATACCCTTA-TA-CCCATTTTTAATGGGTTCAGGGTATAAATAATATA------------A------------------------------------------------------------------------------------------------------TA------------------------------------------ATATTAATCATA-ATAAAAACAATTA--AAT--------------------------------------AA---------------------------------AAG--------AAGA-----------------------------------------------------------------------------A-------------TAC--------------------------------------------------------------------------------------TCCCGTCGCAGATCCGCG-------CAA---------TG------------------------------------ATTCGCAA---AASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................TACATTTGGATTTCGCACAAATTCAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2621.503001000000000000000000000001000000000100000000000000000000000000
..................................................................TACATTTGGATTTCGCACAAATTCAATA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.501000000000000000000000000100000000000000000000000000000000000000
......TGATCAAGAGTATATATACTTTATGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.204000000000000000000000000000001000030000000000000000000000000000
..................................................................TACATTTGGATTTCGCACAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.204000000000000000000000000400000000000000000000000000000000000000
..........CAAGAGTATATATACTTTATGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.153000000000000000000000000000000000120000000000000000000000000000
......TGATCAAGAGTATATATACTTTATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.102000000000000000000000000000000000020000000000000000000000000000
.........................TTTATGGGGTCGGAGGT-GCTTCCTTCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27110.091000000001000000000000000000000000000000000000000000000000000000
...................ATATACTTTATGGGGTCGGAGGT-GC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25140.071000000000001000000000000000000000000000000000000000000000000000
....................................GGAGGT-GCTTCCTTCTGCC--TGTTA-CA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26150.071001000000000000000000000000000000000000000000000000000000000000
..........CAAGAGTATATATACTTTATGGGGTCGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28150.071000000000000000000000000000000000000000000000000000000000000010
.........................TTTATGGGGTCGGAGGT-GCTTCCTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26160.061000000000000000000000000000000000100000000000000000000000000000
...............GTATATATACTTTATGGGGTCGGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25170.061000000000000000000000000000000000000100000000000000000000000000
.............................TGGGGTCGGAGGT-GCTTCCTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22190.051000000010000000000000000000000000000000000000000000000000000000
.........TCAAGAGTATATATACTTTATGGGGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000010000000000000000000000000000000000000
.........TCAAGAGTATATATACTTTATGGGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000001000000000000000000000000000000000000
....................................................TGCC--TGTTA-CATACATTTGGATTTCGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000000010000000000000000000000000000
...TGCTGATCAAGAGTATATATACTTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000000010000000000000000000000000000
................................................................CATACATTTGGATTTCGCACAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
............................................................TTA-CATACATTTGGATTTCGCACAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
.......................................................C--TGTTA-CATACATTTGGATTTCGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000010000000000000000000000000000000
......TGATCAAGAGTATATATACTTTAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000010000000000000000000000000000
..............................................................A-CATACATTTGGATTTCGCAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000000000000000000000000000000010
TGATGCTGATCAAGAGTATATATACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000100000000000000000000000000000000000000000000000000
................................................................CATACATTTGGATTTCGCACAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000010000000000000000000000000000000000
droGri2
-----CTAATATCGAATTTATATACTTTATAGGGTCGGGGAT-GCTTTCTTCTGCC--TGTTA-CAG----T-------TGCACAAAACCATTATAACCTTTATA-CTCATTTTTAATGGGCTCTGGGTATAAAAATAAAA------------T---A-----------------------------------TAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTTAAA------------------------------------------------------------------------TTCAATA-------------TATTTATGTAGATATTTAAGCTATTCTGCCTTTACATACATTA-------------------------TTATTAA---------------------------------------------------TA-TTATTG--GGG-----AAGT-TGCACCCCGA------------CTTG-SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
TGATCCTGATCAAGAATATATATACTTTGTGGGGTCGGAGAT-GCTTCCTTCTGCC--TGTTA-CATACATT-------TTGGCGACTTTAATATACCATTT-CA-CCC------TATGGGTGTATGGTATAATGAGATGC------------GTGCC-----------------------------------TA-------------------ACTAC---------------A-------GAACT------C--GA----------------------------CGGCAT----------------------------TT----TTCAAAG-------T--GTCGACGTGGCTCTGTTGTTAGT--------------------------------------------------------------------------------------------------------------------------------------------G-----TGATCACA-----------------------------------------------------GACATGCGTTCA--------------TC-GTTCTG-----------------------------------------------------------CGATCTGTGTCAGAC---TGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................................................................................................................................................................................................................................TCAAAG-------T--GTCGACGTGGCTCT..........................................................................................................................................................................................................................................................................................................................................21104.4044400103
.....................................................................................................................................TGAGATGC------------GTGCC-----------------------------------TA-------------------ACTAC---------------A-------GAACT------..................................................................................................................................................................................................................................................................................................................................................................................................................................................2643.0012111000
............................................................................................................................................................................................................................................................................................................................................................CGTGGCTCTGTTGTTAGT--------------------------------------------------------------------------------------------------------------------------------------------G-----TGAT...........................................................................................................................................................................2321.50300030
..........................................................................................................................................TGC------------GTGCC-----------------------------------TA-------------------ACTAC---------------A-------GAACT------C--GA----------------------------CGG..............................................................................................................................................................................................................................................................................................................................................................................................................2741.50605010
.....................................................................................................................................TGAGATGC------------GTGCC-----------------------------------TA-------------------ACTAC---------------A-------GAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2541.50605010
...................................................................................................................................AATGAGATGC------------GTGCC-----------------------------------TA-------------------ACTAC---------------A-------GAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2741.25504010
....................................................................................................................................................................................................................................................................................................................................................................TGTTGTTAGT--------------------------------------------------------------------------------------------------------------------------------------------G-----TGATCACA-----------------------------------------------------GACA..............................................................................................................2311.00101000
..................................................................................................................................................................................................................................................................................................................................................................TCTGTTGTTAGT--------------------------------------------------------------------------------------------------------------------------------------------G-----TGATCACA-----------------------------------------------------GACA..............................................................................................................2511.00101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCA--------------TC-GTTCTG-----------------------------------------------------------CGATCTGTGTCAGA......2521.00202000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACA-----------------------------------------------------GACATGCGTTCA--------------TC-GTT..................................................................................21190.7915000510
....................................................................................................................................ATGAGATGC------------GTGCC-----------------------------------TA-------------------ACTAC---------------A-------GA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.75302010
..........................................................................................................................................TGC------------GTGCC-----------------------------------TA-------------------ACTAC---------------A-------GAACT------C--GA----------------------------CG...............................................................................................................................................................................................................................................................................................................................................................................................................2640.75303000
.........................................................................................................................................................................................................................................................................................................................................................CGACGTGGCTCTGTTGTTAGT--------------------------------------------------------------------------------------------------------------------------------------------G-----TGAT...........................................................................................................................................................................2620.50100010
...........................................................................................................................................................................................................................................................................................................................................................ACGTGGCTCTGTTGTTAGT--------------------------------------------------------------------------------------------------------------------------------------------G-----TGAT...........................................................................................................................................................................2420.50100010
..........................................................................................................................................TGC------------GTGCC-----------------------------------TA-------------------ACTAC---------------A-------GAACT------..................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.50202000
............................................................................................................................................................................................................................................................................................................................................................CGTGGCTCTGTTGTTAGT--------------------------------------------------------------------------------------------------------------------------------------------G-----TGATC..........................................................................................................................................................................2420.50100010
....................................................................................................................................ATGAGATGC------------GTGCC-----------------------------------TA-------------------ACTAC---------------A-------GAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.50200020
.......................................................................................................................................................................................................................................................................................................................................TCAAAG-------T--GTCGACGTGGCTCC..........................................................................................................................................................................................................................................................................................................................................21100.50550000
...................................................................................................................................AATGAGATGC------------GTGCC-----------------------------------TA-------------------ACTAC---------------A-------GAACT------..................................................................................................................................................................................................................................................................................................................................................................................................................................................2840.50202000
......................................................................................................................................................................................................................................................................................................................................TTCAAAG-------T--GTCGACGTGGCTCTGTTG......................................................................................................................................................................................................................................................................................................................................2650.40200020
........................................................................................................................................................................................................................................................................................................................................................TCGACGTGGCTCTGTTGTTAGT--------------------------------------------------------------------------------------------------------------------------------------------G-----TG.............................................................................................................................................................................25200.40800080
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTTCA--------------TC-GTTCTG-----------------------------------------------------------CGATCTGT............24200.30606000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTTCA--------------TC-GTTCTG-----------------------------------------------------------CGATCTGTG...........25200.30600060
.....................................................................................................................................TGAGATGC------------GTGCC-----------------------------------TA-------------------ACTAC---------------A-------GAACT------C--...............................................................................................................................................................................................................................................................................................................................................................................................................................................2740.25101000
....................................................................................................................................ATGAGATGC------------GTGCC-----------------------------------TA-------------------ACTAC---------------A-------GAACT------..................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.25100010
.......................................................................................................................................................................................................................................................................................................................................TCAAAG-------T--GTCGACGTGGCTCTGTTG......................................................................................................................................................................................................................................................................................................................................2580.25202000
..........................................................................................................................................................................................................................................................................................................................................................GACGTGGCTCTGTTGTTAGT--------------------------------------------------------------------------------------------------------------------------------------------.....................................................................................................................................................................................20200.25500104
....................................................................................................................................ATGAGATGC------------GTGCC-----------------------------------TA-------------------AC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.25101000
.....................................................................................................................................TGAGATGC------------GTGCC-----------------------------------TA-------------------ACTAC---------------A-------GA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.25101000
..........................................................................................................................................TGC------------GTGCC-----------------------------------TA-------------------ACTAC---------------A-------GAACT------C--GA----------------------------CGGC.............................................................................................................................................................................................................................................................................................................................................................................................................2840.25101000
......................................................................................................................................GAGATGC------------GTGCC-----------------------------------TA-------------------ACTAC---------------A-------GAACT------..................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.25101000
.......................................................................................................................................................................................................................................................................................................................................TCAAAG-------T--GTCGACGTGGCTC...........................................................................................................................................................................................................................................................................................................................................20100.20220000
.................................................................................................................................................................................................TA-------------------ACTAC---------------A-------GAACT------C--GA----------------------------CGGC.............................................................................................................................................................................................................................................................................................................................................................................................................20200.15303000
....................................................................................................................................................................................................................................................................................................................................................T--GTCGACGTGGCTCTGTTGTTAG..................................................................................................................................................................................................................................................................................................................................23200.15303000
.......................................................................................................................................................................................................................................................................................................................................TCAAAG-------T--GTCGACGTGGCTCTGTTGT.....................................................................................................................................................................................................................................................................................................................................2680.13101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTTCA--------------TC-GTTCTG-----------------------------------------------------------CGATCTG.............23200.10202000
.............................................................................................................................................................................................................................................................................................................................................................GTGGCTCTGTTGTTAGT--------------------------------------------------------------------------------------------------------------------------------------------G-----TG.............................................................................................................................................................................20200.10200002
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACATGCGTTCA--------------TC-GTTCTG-----------------------------------------------------------CGATC...............25190.05101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGCGTTCA--------------TC-GTTCTG-----------------------------------------------------------C...................19200.05100001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTTCA--------------TC-GTTCTG-----------------------------------------------------------CGATCTGTT...........25200.05100010
...........................................................................................................................................................................................................................................................................................................................................AG-------T--GTCGACGTGGCTCTGTTGTT....................................................................................................................................................................................................................................................................................................................................23200.05100001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGCGTTCA--------------TC-GTTCTG-----------------------------------------------------------CGTA................22200.05110000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTTCA--------------TC-GTTCTG-----------------------------------------------------------CGATCT..............22200.05110000
........................................................................................................................................................................................................................................................................................................................................................TCGACGTGGCTCTGTTGTTAGT--------------------------------------------------------------------------------------------------------------------------------------------G-----T..............................................................................................................................................................................24200.05100010
.............................................................................................................................................................C-----------------------------------TA-------------------ACTAC---------------A-------GAACT------C--GA----------------------------CGGCA............................................................................................................................................................................................................................................................................................................................................................................................................22200.05100001
............................................................................................................C------TATGGGTGTATGGTATAATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCA--------------TC-GTTCTG-----------------------------------------------------------CGATCTGTG...........22200.05110000
.......................................................................................................................................................................................................................................................................................................................................................GTCGACGTGGCTCTGTTGTTAGT--------------------------------------------------------------------------------------------------------------------------------------------G-----T..............................................................................................................................................................................25200.05101000
.........................................................................................................................................................................................................................................................................................................................................AAAG-------T--GTCGACGTGGCTCTGTT.......................................................................................................................................................................................................................................................................................................................................22200.05110000
............................................................................................................................................................................................................................................................................................................................................G-------T--GTCGACGTGGCTCTGTTG......................................................................................................................................................................................................................................................................................................................................20200.05100010
........................................................................................................................................................................................................................................................................................................................................CAAAG-------T--GTCGACGTGGCTCTGTTGT.....................................................................................................................................................................................................................................................................................................................................25200.05100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTTCA--------------TC-GTTCTG-----------------------------------------------------------CGATCTG.............22200.05101000
dp5
TGATGCTGATCAAGAATATATATACTTTATGGTGTCGGAAAC-GATTCCTTCTGGA--CGTTA-CACACATCCACTTTTACCACAAATCTAATATACCCCAA-TA-CTCAT----TTTGAGTATCGGGTATAAAAAGAATT------------ACGACAATACATATCACTCTATAACTTGTTTCG-------AAAAT-----ATACTATTA-----------------------------------------------------------------AAAAAATATTGTCT--------------------------------TTGATAGG---------A--GCTGA---AGCTTCAGAAGAAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATA---------CGAATTGTTCCGT-----ACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................................................................................T------------ACGACAATACATATCACTCTATAACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
..............................................TCCTTCTGGA--CGTTA-CACACATCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.751501500000000
..............................................................................TACCACAAATCTAATATACCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.701401400000000
.............................TGGTGTCGGAAAC-GATTCCTTCTGGA--CG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2830.6720020000000
.........................................C-GATTCCTTCTGGA--CGTTA-CACACATCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.4590900000000
...TGCTGATCAAGAATATATATAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1530000300000
...................ATATACTTTATGGTGTCGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1980.1310100000000
..............................................................................................................T----TTTGAGTATCGGGTATAAAAAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1020000000200
.............................................................................TTACCACAAATCTAATATACCCCAA-T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1020000000020
...........................................................................................................TCAT----TTTGAGTATCGGGTATAAAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1020000000020
..............................................................................................................T----TTTGAGTATCGGGTATAAAAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
.....................................................................................................................TGAGTATCGGGTATAAAAAGAATA------------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000010
............................................................................TTTACCACAAATCTAATATACCCCAA-T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510100000000
.........................................................................................TAATATACCCCAA-TA-CTCAT----T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000010
droPer2
TGATGCTGATCAAGAATATATATACTTTATAGGGTCGGAAAC-GATTCCTTCTGGA--CGTTA-CACACATCCACTTTTACCACAAATCTAATATACCCCAA-TA-CTCAT----TTTGAGTATCGGGTATAAAAACTACG------------AAAAA-----------------------------------T---------ATACAATTA--ACTAC---------------A-------GA--------------------------------------------------------------------------------------------------------------------------AAAAC---------------------------------TACATTAATTT------------------------------------------------------------------------------------------------------------------------------ACA-AAAACTTATTTCTAATA------TCACAGGCAAGTAACTA---------------------------------------------------AA-ACTATG--GAC-----AAAC-TATC--------TACGG----ATATGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................................................................................................................................................................................................TTA--ACTAC---------------A-------GA--------------------------------------------------------------------------------------------------------------------------AAAAC---------------------------------TACATTAATT.................................................................................................................................................................................................................................................................................26202.05410410000
..................................................................................................................................................................................................................TA--ACTAC---------------A-------GA--------------------------------------------------------------------------------------------------------------------------AAAAC---------------------------------TACATTAATT.................................................................................................................................................................................................................................................................................25200.408080000
...................................................................................................................................AAAAACTACG------------AAAAA-----------------------------------T---------ATACAATTA--ACTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2940.251010000
.........................................................................................................................................TACG------------AAAAA-----------------------------------T---------ATACAATTA--ACTAC---------------A-------GA--------------------------------------------------------------------------------------------------------------------------.................................................................................................................................................................................................................................................................................................................................2790.222020000
........................................................................................................................................................................................................................TAC---------------A-------GA--------------------------------------------------------------------------------------------------------------------------AAAAC---------------------------------TACATTAATTT------------------------------------------------------------------------------------------------------------------------------ACA-A.............................................................................................................................................26200.204040000
.................................................................................................................................................................................................................TTA--ACTAC---------------A-------GA--------------------------------------------------------------------------------------------------------------------------AAAAC---------------------------------TACATTAAT..................................................................................................................................................................................................................................................................................25200.204040000
.....................................................................................................................................AAACTACG------------AAAAA-----------------------------------T---------ATACAATTA--ACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2690.111010000
......................................................................................................................................AACTACG------------AAAAA-----------------------------------T---------ATACAATTA--ACTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2690.111010000
.....................................................................................................................................AAACTACG------------AAAAA-----------------------------------T---------ATACAATTA--ACTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2790.111010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TT------------------------------------------------------------------------------------------------------------------------------ACA-AAAACTTATTTCTAATA------TCACAGG................................................................................................................29200.102020000
...................................................................................................................................................................................................................A--ACTAC---------------A-------GA--------------------------------------------------------------------------------------------------------------------------AAAAC---------------------------------TACATTAATT.................................................................................................................................................................................................................................................................................24200.102020000
...........................................................................................................................................................AAA-----------------------------------T---------ATACAATTA--ACTAC---------------A-------GA--------------------------------------------------------------------------------------------------------------------------AAAAC---------------------------------...........................................................................................................................................................................................................................................................................................26140.071010000
.................................................................................................................................................................................................................TTA--ACTAC---------------A-------GA--------------------------------------------------------------------------------------------------------------------------AAAAC---------------------------------TACATTAATTT------------------------------------------------------------------------------------------------------------------------------A.................................................................................................................................................28190.051010000
............................................................................................................................................................................................................................................................................................................................................................................................................................TTT------------------------------------------------------------------------------------------------------------------------------ACA-AAAACTTATTTCTAATA------.......................................................................................................................23200.051010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTCTAATA------TCACAGG................................................................................................................18200.051010000
.................................................................................................................................................................................................T---------ATACAATTA--ACTAC---------------A-------GA--------------------------------------------------------------------------------------------------------------------------AAAAC---------------------------------TACAT......................................................................................................................................................................................................................................................................................28200.051010000
.........................................................................................................................................................................................................................AC---------------A-------GA--------------------------------------------------------------------------------------------------------------------------AAAAC---------------------------------TACATTAATTT------------------------------------------------------------------------------------------------------------------------------ACA-A.............................................................................................................................................25200.051010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA---------------------------------------------------AA-ACTATG--GAC-----AAAC-TATC--------TACGG----A.....27200.051010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA-AAAACTTATTTCTAATA------TCACAGGC...............................................................................................................28200.051010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA---------------------------------------------------AA-ACTATG--GAC-----AAAC-TATC--------TA.............23200.051010000
.......................................................................................................................................................................................................................CTAC---------------A-------GA--------------------------------------------------------------------------------------------------------------------------AAAAC---------------------------------TACATTAATT.................................................................................................................................................................................................................................................................................22200.051010000
...................................................................................................................................................................................................................A--ACTAC---------------A-------GA--------------------------------------------------------------------------------------------------------------------------AAAAC---------------------------------TACATTAAT..................................................................................................................................................................................................................................................................................23200.051010000
....................................................................................................................................................................................................................................................................................................................................................................................................................TACATTAATTT------------------------------------------------------------------------------------------------------------------------------ACA-AAAACTTATTTCT.................................................................................................................................27200.051010000
droAna3
TGATCCTGATCAAGAATATATATACTTTATAGGGTCGGAGAT-GTCTCCTTCACTG--CGTTG-CACACTTT-------TGACCAAAATTATAATACCCTCT--------------GC-----AAGGGTATAAAGAGAACA------------AAGCA-----------------------------------CAC------------------------------------------------------------AAACAACAA--------------------------T---------TATTAAT---------AGACAATAA--AAT----AG-----------------------------TAGAACCGTC----------------------------TGTA--------------------------------------------------------------------TCA-------------------------------GCCT---------------------------ATA-ACAGCCCA-------------------------CTGTTATTAGTTCCGAAGAAATCACTTCCC-----------------------------------------------------------GGA------------TCTG-SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................................................TTATAATACCCTCT--------------GC-----AAGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102020000
.....................................................................................................................................................................................................................................................................................................................................................................................GTC----------------------------TGTA--------------------------------------------------------------------TCA-------------------------------GCCT---------------------------ATA-ACAGCCCA-------------------------CTGT.........................................................................................................29110.091100000
........................................................................................................................................................................................................................................................................................................................................AAT----AG-----------------------------TAGAACCGTC----------------------------TGTA--------------------------------------------------------------------TCA-------------------------------GCCT---------------------------A.................................................................................................................................................27150.071100000
...................................................................................................................................................................................................................................................................................................................................TAA--AAT----AG-----------------------------TAGAACCGTC----------------------------TGTA--------------------------------------------------------------------TCA-------------------------------GCC..............................................................................................................................................................................28160.061100000
............................................TCTCCTTCACTG--CGTTG-CACACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051001000
droBip1
TGATCCTGATCAAGAATATATATACTTTATAGGGTCGGAGATAGGGTCCTTCACTG--CGTTG-CACACTTT-------TGGACAAAATTATAATACCCTCT--------------GA-----AAGGGTATAAGGAGGTATTAAAATATATTAC-TGA------------TATGTCAATTGGTC---------------------------------------------------------TAT---------------------------------------------------------TATTAAA----------GACCATTA--AAG--------------------------------------AA---------------------------------AAGAGTATGTTA-----------------------------------------------------------------GATATTGTA-----TATACATACGTATGTCTACA----------------------------------------------------------------------------------------------GGTCAGT---------------------------------------AAA-CC--------ATCTGTACTAC-----ACSizeHit CountTotal NormTotal
No Reads
droKik1
TGATGCTGATCAAGAATATATATACTTTATAGGGTCGGAAAC-GTCTCCTTCACTG--CGTTG-CAAACTTC-------TGACTGAAATTATAATACCCTGC---------------------AAGGGTATAATAAACTAA------------TTGCC-----------------------------------TAAA----------------------------------------------------------------------------------------------T------ATATATTTAA------------------------------------------------------------------------------------------------------------------------------------AATATTATTTGGAAACATTTTGAAATACTTTAT--------------------------------------------------------------------------------------------------------------------------------CCTTCAAAGTTCAGTG-------CAAAATCAAAAG--------------------AA-TC--------ATCTACAGAAAA---CGTSizeHit CountTotal NormTotal
No Reads
droFic1
TGATGCTTATCAAGAATATATATACTTTATGGGGTCTGAGGT-GTCTCCTTCACTG--CGTTG-CAAACTTC-------TGGCCAAAATTATAATACCCT-T-TG-CTC------TGC-----AAGGGTATAAAAATGCCG------------TAATA-----------------------------------TGAA---------------ATG--------------TTTATAT----TATT---------------------------------------------------------TATAAAT--------------------------------------------------------------------------------------------------------------------------------------AAAGTTCTTTATAAAGT-------------------------------------------ACGCATATAATAA--------------------------------------TGTG-----ATAATGTGACATGATTCTGA------------------------------------------------------CGCGTGCTG--GGA-----ATA----------------------AA---GTSizeHit CountTotal NormTotal
No Reads
droEle1
TGATGCTGAGCAAGAATATATATATA-----TTGTCGGAAAT-GTCTCCTTCACTG--CGTTG-CAAACTTC-------TGAATGAAATAATAATACCCTCT--------------GC-----ATGGGTATAAAGATCTAC------------AT-------------------------------------------------------------------------------------TATC---------TAACA------ATT---------------------------------CCTGCAGC---T-----------ATAACAGT---------A--AC---------------------AGAAG---------------------------------CAGAATAAGAA------------------------------------------------------------------GATATAGAATCAGA----TATAAGTGTGCCA------------------------------------------------------------------------------------------------------------------------------------G--ACGTAAAAAAA-AC-----------------AT-----ATSizeHit CountTotal NormTotal
No Reads
droRho1
TGATCCTGATCAAGAATATATATACTTTATAGGGTCGGAAAC-GCTTCCTTCTAGC--TGTTA-CATACTTT-------TGCACGAATACAATATACCCTTT-TA-CTC------TACGAGTAACGAGTATAAATATATAC------------A--GA-----------------------------------G------------------AGCCTACAATTAAATATTGAATACTCGTTTCT---TATCAATAAGA------AGCCTAAGAGCTAAAAAAACAACAACA--------------------------------TTGATAAG---------A--AACGACTTAGCCCGAAAATAAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATSizeHit CountTotal NormTotal
No Reads
droBia1
TGACGCTGATCAGGAATATATATACTTTATGGGGTCTGAAAC-GTTTCCTTCACTG--CGTTG-CAAACTTC-------TGGCTAAAATCATTATATCCTCT--------------GC-----AAGGGTATAAATATCGGA------------AAAAC-----------------------------------T-----------------------AA---------------A-----------------------------A--------------------------G------GATTGCTTAC----------CACT-----------TTTA-----------------------------AAACC---------------------------------TACATTAGTTTAAACA--------------------------------------------------------------------------ATA-------------TACCTGCGTA-----------------------------------------------------GACAATT---------------------------------AGTG-------------------------------------------------------TTCGA----TTTTGASizeHit CountTotal NormTotal
No Reads
droTak1
TGACCCTGATCCAAAATATATATACTTTATGGGGTCGGAAAC-GCTTCCTTCTAGC--TGTTA-CATACTTC-------TGCACGAATACAATATACCCTTT-TA-CTC------CACGAGTAACGGGTATACAAATAATG------------AAAAC-----------------------------------CGAAATT-----------------------------TCATTAT----AGT---------------------------------------------------------CTCTCTAC---TAT-----------------------GTAAAT-----------------------AAAAA---------------------------------TTGA--AA---------------------------------------------------------------------------------------TCCATATCTTCAAAAT-------------------------------------------------------------------------------------------------AAGAGTTTATTCCAAAAAAAAAGC--------------------AA-TT-AATCTTAATGTGCACTGTG---TGCSizeHit CountTotal NormTotal
No Reads
droEug1
TCATCCTGATTAAGAATATATATACTTTATAGGGTCGGAAAC-GCTTCCTTCTACC--TGTTA-CATACTTT-------TCAACGAATCTAGTATACCCTTT-TA-CTT------TACGAGTAACGGGTATAAAAATTCAG------------TAAAC-----------------------------------G---------AAAC---------------------------A-----------------------------A--------------------------T---------TATTTTA------------------------------------------------------------AAG---------------------------------TAATATAACTCAAGT------------------------------------------------------------------------------------------------------------AAACTAATA-------------AATATTAA------------------------------------------TCACTTCCAGAATCAGTGTTTGT--------------TG-GTGCTGAGGAA-----AA-----------------------AA---AGSizeHit CountTotal NormTotal
No Reads
dm3
TGATCCAAATCAAGAATATACATACTTTATATAGTCAGAAAC-GCTTCCTTTTGCC--TGTTA-CATACTTT--------CAACGAATCTAGTATATCCTTT-TT-CTC------TACGAGTAACGGGTATAAAATGGTTA------------AAATT-----------------------------------CCGGCGTGCAATGC---------------------------A-----------------------------A--------------------------T------GTATTTCTAT----------G-TT-----------TTTG-----------------------------AAAAA---------------------------------CATTCCAAGCCAAATT--------------------------------------------------------------------------ATA-------------TGCACTCGC----------------------------------------------------------------------------------------GGGA-------------------------TG-GCTCTATAAAA-----ATAA-AATTTTTCAA------------TGTG-SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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.........................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCCAAATT--------------------------------------------------------------------------ATA-------------TGCACTCGC----------------------------------------------------------------------------------------GGGA-------------------------...................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TTA-CATACTTT--------CAACGAATCTAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2431.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-------------TGCACTCGC----------------------------------------------------------------------------------------GGGA-------------------------TG-G...............................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
............................................................................................................................................................TT-----------------------------------CCGGCGTGCAATGC---------------------------A-----------------------------A--------------------------T------GTATTTCT.............................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................CATACTTT--------CAACGAATCTAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2131.0030000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000000000000000000000000000000000000000000
...................ACATACTTTATATAGTCAGAAAC-GCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................CTTT--------CAACGAATCTAGTATATCCTTT-T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2721.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................TATATCCTTT-TT-CTC------TACGAGTAACG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TATAAAATGGTTA------------AAATT-----------------------------------CCGGCGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TATAGTCAGAAAC-GCTTCCTTTTGCC--.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TTT--------CAACGAATCTAGTATATCCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23140.79110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000300010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TATATAGTCAGAAAC-GCTTCCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.7530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................CATACTTT--------CAACGAATCTAGTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
......................TACTTTATATAGTCAGAAAC-GCTTCCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2830.6720000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................TGC---------------------------A-----------------------------A--------------------------T------GTATTTCTAT----------G-TT-----------TTTG-----------------------------A................................................................................................................................................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................TT--------CAACGAATCTAGTATATCCTTT-T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25100.5050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAAAA-----ATAA-AATTTTTCAA------------TGT..2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................AA---------------------------------CATTCCAAGCCAAATT--------------------------------------------------------------------------ATA-------------TGCA.............................................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TGTTA-CATACTTT--------CAACGAATCTAGTATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TT-CTC------TACGAGTAACGGGTATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................CATTCCAAGCCAAATT--------------------------------------------------------------------------ATA-------------TGCACTCG.........................................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TATACATACTTTATATAGTCAGAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................AGTAACGGGTATAAAATGGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TACTTT--------CAACGAATCTAGTATATCCTTT-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................TG-----------------------------AAAAA---------------------------------CATTCCAAGCCAAATT--------------------------------------------------------------------------.................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................TTTTGCC--TGTTA-CATACTTT--------C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................AATCTAGTATATCCTTT-TT-C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................CTTT-TT-CTC------TACGAGTAACGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................TCCTTTTGCC--TGTTA-CATACTTT--------CA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TGCC--TGTTA-CATACTTT--------CAACGAATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................AGCCAAATT--------------------------------------------------------------------------ATA-------------TGCACTCGC----------------------------------------------------------------------------------------................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................CATTCCAAGCCAAATT--------------------------------------------------------------------------ATA-------------TG...............................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................A-CATACTTT--------CAACGAATCTAGTATAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................CAACGAATCTAGTATATCCTTT-TT-C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................TGC---------------------------A-----------------------------A--------------------------T------GTATTTCTAT----------G-T..............................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TGCC--TGTTA-CATACTTT--------CAACG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2260.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TACTTT--------CAACGAATCTAGTATATCCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TCCAAGCCAAATT--------------------------------------------------------------------------ATA-------------TGCAA............................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TTT--------CAACGAATCTAGTATATCCTTT-TT-T....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................TTTG-----------------------------AAAAA---------------------------------CATTCCAAGCCAAATT--------------------------------------------------------------------------A................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................TTT-TT-CTC------TACGAGTAACGGGTATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................ACGGGTATAAAATGGTTA------------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TTATATAGTCAGAAAC-GCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TTTGCC--TGTTA-CATACTTT--------CAACGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TT-TT-CTC------TACGAGTAACGGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TTGCC--TGTTA-CATACTTT--------CAACGAATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TTTGCC--TGTTA-CATACTTT--------CAACGAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................AAA---------------------------------CATTCCAAGCCAAATT--------------------------------------------------------------------------AT...............................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TTT--------CAACGAATCTAGTATATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21170.4170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................AAC-GCTTCCTTTTGCC--TGTTA-CATACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2780.3830000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TA-CATACTTT--------CAACGAATCTAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
......................TACTTTATATAGTCAGAAAC-GCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................ATACTTT--------CAACGAATCTAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................A-CATACTTT--------CAACGAATCTAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TACTTTATATAGTCAGAAAC-GCTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.3310000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................A-CATACTTT--------CAACGAATCTAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................TC------TACGAGTAACGGGTATAAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000
..........................TTATATAGTCAGAAAC-GCTTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
....................................................TGCC--TGTTA-CATACTTT--------CAACGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TTTATATAGTCAGAAAC-GC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TGATCCTGATCAAGAATATATATACTTTATATAATCGGAAAC-GCTTCCTTCTGAC--TGTTA-CATACTTT-------TCAACGAGTCTAGTATACCCTTT-TA-CTC------TACGAATAACGGGTATAACAATAACT---------------------------------------------------------------------------------------------------------------------------------------------------------------GTAATTAC----------CGCT--------------A-----------------------------AGTGT-----TGCACTTCCTTTTGCGGACTGATAGGTATAAAGATAATTAAT--ACCCTAGAATTTATATTTTAA----------------------------------------------------------------------AGAT------------AAGCTAATC-------------ATTATTTATGGTA------CATTTGCAGAGTAATGA---------------------------------------------------TG-GAACTG--GAA-----AA-----------------------------ASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................TCCTTCTGAC--TGTTA-CATACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21133.31430010002111910000000
........................................................................................................................................................................................................................................................................................................................................................................................TGCACTTCCTTTTGCGGACTGATAGGTA...........................................................................................................................................................................................................................................................................................2812.00200000000020000000
.......................................AAC-GCTTCCTTCTGAC--TGTTA-CATACTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2822.00400400000000000000
......................................................................TT-------TCAACGAGTCTAGTATACCCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2381.381100000050600000000
...................ATATACTTTATATAATCGGAAAC-GCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2631.33400000030100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCAGAGTAATGA---------------------------------------------------TG-GAACTG--GAA-----AA-----------------------------.2711.00100000001000000000
.............GAATATATATACTTTATATAATCGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000010000000
.................................................................................................................................................................................................................................................................................................................................T--------------A-----------------------------AGTGT-----TGCACTTCCTTTTGCGGAC....................................................................................................................................................................................................................................................................................................2611.00100000000010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAA----------------------------------------------------------------------AGAT------------AAGCTAATC-------------ATT.......................................................................................................................................2211.00100010000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TGCGGACTGATAGGTATAAAGATAAT.................................................................................................................................................................................................................................................................................2611.00100000000100000000
..................................................TCTGAC--TGTTA-CATACTTT-------TCAACGAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
...........................................................................................................TC------TACGAATAACGGGTATAACAATAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000001000
...............ATATATATACTTTATATAATCGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000010000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTGCGGACTGATAGGTATAAAGA.....................................................................................................................................................................................................................................................................................2411.00100000001000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TTATATTTTAA----------------------------------------------------------------------AGAT------------AAGCTAATC-------------AT........................................................................................................................................2611.00100000000010000000
.................................................TTCTGAC--TGTTA-CATACTTT-------TCAACGAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000001000000000
......................................................................TT-------TCAACGAGTCTAGTATACCCTTT-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2580.63500020020100000000
..............................................TCCTTCTGAC--TGTTA-CATACTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2280.50400000010210000000
...................ATATACTTTATATAATCGGAAAC-GC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2530.33100000000001000000
....................TATACTTTATATAATCGGAAAC-GCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2530.33100010000000000000
......................................................................TT-------TCAACGAGTCTAGTATACCCTTT-T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.29200000020000000000
......................................................................TT-------TCAACGAGTCTAGTATACCCTTT-TA-.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2770.29200000010100000000
.............................................TTCCTTCTGAC--TGTTA-CATACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22110.27300000030000000000
..............................................TCCTTCTGAC--TGTTA-CATACTTT-------TCAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2840.25100000000000010000
...................ATATACTTTATATAATCGGAAAC-GCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.25100100000000000000
............................................................................................TATACCCTTT-TA-CTC------TACGAATAACGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2840.25100000000010000000
......................................................................TT-------TCAACGAGTCTAGTATACCCTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.25200000020000000000
......................................................................TT-------TCAACGAGTCTAGTATACCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2290.22200000010100000000
............................................CTTCCTTCTGAC--TGTTA-CATACTTT-------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.20100010000000000000
...................................................................ACTTT-------TCAACGAGTCTAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1960.17100000000001000000
..............................................TCCTTCTGAC--TGTTA-CATACTTT-------T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.14100000000010000000
.....................................GAAAC-GCTTCCTTCTGAC--TGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.13101000000000000000
..............................................TCCTTCTGAC--TGTTA-CATACTTT-------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2380.13100000010000000000
......................................................................TT-------TCAACGAGTCTAGTATACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.11100000000100000000
...........................................GCTTCCTTCTGAC--TGTTA-CATACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24100.10100000010000000000
..............................................................A-CATACTTT-------TCAACGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17100.10100000000001000000
..ATCCTGATCAAGAATATATATACTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10200000020000000000
......................................................................TT-------TCAACGAGTCTAGTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17110.09100000000100000000
................................................................................CAACGAGTCTAGTAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15110.09100000000100000000
..............................................TCCTTCTGAC--TGTTA-CATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19130.08100000000100000000
................................................CTTCTGAC--TGTTA-CATACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19140.07100000000100000000
................................................................................................CCCTTT-TA-CTC------TACGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.05100000000010000000
..ATCCTGATCAAGAATAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.05100000000001000000
......................................................................TT-------TCAACGAGTCTAGTATACCCTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100000000100000000
......................................................................TT-------TCAACGAGTCTAGTATACCCTTT-A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100000000100000000
..............................................TCCTTCTGAC--TGTTA-CATATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100000010000000000
..............................................TCCTTCTGAC--TGTTA-CATAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100000000000010000
droSec2
TGATTCTGATCAAGAATATATATATTTTATATGGTCGGAAAC-GCTTCCTTCTGCC--TGTTA-CATACTTT-------TCAACGAATCTAGTATACCCTTT-TA-CTC------TGTGAGTAACGGGTATAAATACCATA------------GAAGC-----------------------------------C--------------------------------------------------------------AA----------------------------CCGAATTCTACTAATCGATTAT----------TATT-----------ATTG-----------------------------AAAAG---------------------------------TGGTTCAATTGAGGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................TT-------TCAACGAATCTAGTATACCCTTT-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25203.306666000
......................................................................TT-------TCAACGAATCTAGTATACCCTTT-T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.4088000
.............................TATGGTCGGAAAC-GCTTCCTTCTGCC--.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1022000
.............................................TTCCTTCTGCC--TGTTA-CATACTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0511000
.....................................................................TTT-------TCAACGAATCTAGTATACCCTTT-T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0511000
.............................TATGGTCGGAAAC-GCTTCCTTCTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0511000
......................................................................TT-------TCAACGAATCTAGTATACCCTTT-TA-.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0511000
.....................................................................TTT-------TCAACGAATCTAGTATACCCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0511000
..........................TTATATGGTCGGAAAC-GCTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100
.....................................................................TTT-------TCAACGAATCTAGTATACCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0511000
droYak3
TGATCCTGATCAAGAATATATATACTTTATATGGTCGGAAAC-GCTTCCTTCTGCC--TGTTA-CATACTTT-------TCAACGAATCTAGTATACCCTTT-TA-CTC------TACGAGTAACGGGTATAAAAACCGTA------------AAGGA-----------------------------------TAAATAT-----------------------------CCAATGC----CAAA---------------------------------------------------------TATCAAC--------------------------------------------------------------------------------------------------------------------------------------GATGTTCTAGACAGAATTGGAAGAGCCAAATATTTCACAGCTTTAGAT-----TTGACAAGCGGATACCACCA---------------------------------------------------------------------------------------------------------------------------------G--GTG-----AAAA-TG------------AACCCC-----AASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................C-GCTTCCTTCTGCC--TGTTA-CATACTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.20404000000000
................................................................................CAACGAATCTAGTATACCCTTT-TA-CTC------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000000000
droEre2
TGATCCTGATCAAGAATATATATACTTTATATGGTCGGAAAC-GCTTCCTTCTGCC--TGTTA-CATACTTT-------TCAACGAATCTAGTATACCCTTT-TA-CTC------TAGGAGTAACGGGTATAACTATTGTT------------------------------------------CCGGGTAATATAAA---------------AT--------------------------------------------------------------------------------------GT----------AT-----------------------GCAAAA-----------------------AGAAG---------------------------------CAGA--AA---------------------------------------------------------------------------------------GCTAAGTTTTCCAACTGGACA-----------------------------------------------------GGAAATTGATTT---------------------------------------------------TG-GTTCTG--GAA-----A-------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................TT-TA-CTC------TAGGAGTAACGGGTATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2450.2010000001
.............................TATGGTCGGAAAC-GCTTCCTTCTGCC--.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1530000003
....................TATACTTTATATGGTCGGAAAC-G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0511000000
...............................................................................TCAACGAATCTAGTATACCCTTT-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0511000000

Generated: 05/17/2015 at 11:19 PM