dmo_89

GTCGTTCTCCCTGAAACCAAGTTTCGAATAGATTTCGACTTGTTGGGTACTTAGTTGCTAACGTGGCCAATATTTGTAATATGTTTACGTGTTATCAGTTCCAAGGGAGCATGCGTGCGAAAATAAGGCACTTTAGCAGCCAAGAGTCCACAGTCCAAGTCCAGCATTATCGATAAGTTCGCATCGAATCTCAGC *********************************..((....((((.((((.((((((((.((.(((....(((((.........((((((.....(((((...)))))))))))))))).....))))).))))))))...)))))).))......))*********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V110 male body	M046 female body	V056 head	M060 embryo	V049 head
..................................................TTAGTTGCTAACGTGGCCAATATTCC.......................................................................................................................	26	2	1	86.00	86	79	6	1	0	0
...........................................................................................................................TAAGGCACTTTAGCAGCCAAGA..................................................	22	0	1	64.00	64	32	28	2	1	1
..................................................TTAGTTGCTAACGTGGCCAATATTCCC......................................................................................................................	27	3	1	53.00	53	51	1	0	1	0
..........................................................................................................................ATAAGGCACTTTAGCAGCCAAG...................................................	22	0	1	50.00	50	40	6	2	0	2
...................................................TAGTTGCTAACGTGGCCAATATTTCCC.....................................................................................................................	27	3	1	38.00	38	36	1	1	0	0
...........................................................................................................................TAAGGCACTTTAGCAGCCAAG...................................................	21	0	1	32.00	32	20	12	0	0	0
...................................................TAGTTGCTAACGTGGCCAATATTTCC......................................................................................................................	26	2	1	28.00	28	27	1	0	0	0
..................................................TTAGTTGCTAACGTGGCCAATATTC........................................................................................................................	25	1	1	24.00	24	21	3	0	0	0
...................................................TAGTTGCTAACGTGGCCAATATTTC.......................................................................................................................	25	1	1	14.00	14	10	3	1	0	0
...........................................................................................................................TAAGGCACTTTAGCAGCCAAGT..................................................	22	1	1	10.00	10	8	2	0	0	0
..................................................TTAGTTGCTAACGTGGCCAATA...........................................................................................................................	22	0	1	8.00	8	8	0	0	0	0
...................................................TAGTTGCTAACGTGGCCAATATTCCC......................................................................................................................	26	3	1	6.00	6	6	0	0	0	0
..................................................TTAGTTGCTAACGTGGCCAATATT.........................................................................................................................	24	0	1	5.00	5	5	0	0	0	0
..................................................TTAGTTGCTAACGTGGCCAAT............................................................................................................................	21	0	1	4.00	4	4	0	0	0	0
...................................................TAGTTGCTAACGTGGCCAATATTTCTCC....................................................................................................................	28	3	1	3.00	3	3	0	0	0	0
..................................................TTAGTTGCTAACGTGGCCAATATTCTC......................................................................................................................	27	3	1	3.00	3	3	0	0	0	0
...................................................TAGTTGCTAACGTGGCCAATATTCC.......................................................................................................................	25	2	1	3.00	3	3	0	0	0	0
...................................................TAGTTGCTAACGTGGCCAATATTTCAA.....................................................................................................................	27	2	1	2.00	2	2	0	0	0	0
...................................................TAGTTGCTAACGTGGCCAATATTTCTC.....................................................................................................................	27	2	1	2.00	2	2	0	0	0	0
..................................................TTAGTTGCTAACGTGGCCAATATTCCT......................................................................................................................	27	2	1	2.00	2	1	0	1	0	0
..................................................TTAGTTGCTAACTTGGCCAATATTCC.......................................................................................................................	26	3	1	2.00	2	2	0	0	0	0
............................................................................................................................AAGGCACTTTAGCAGCCAAGA..................................................	21	0	1	2.00	2	0	2	0	0	0
..................................................TTAGTTGCTAACGTGGCCAATT...........................................................................................................................	22	1	1	2.00	2	2	0	0	0	0
...........................................................................................................................TAAGGCACTTTAGCAGCCAA....................................................	20	0	1	1.00	1	1	0	0	0	0
....................................................................................TTACGTGTTATCAGTTCCAAGGGAGCA....................................................................................	27	0	1	1.00	1	1	0	0	0	0
..................................................TTAGCTGCTAACGTGGCCAATATTCC.......................................................................................................................	26	3	1	1.00	1	1	0	0	0	0
..................................................TTAGTTGCTAACGTGGACAATATTCC.......................................................................................................................	26	3	1	1.00	1	1	0	0	0	0
...................................................TAGTTGCTAACGTGGCCAAT............................................................................................................................	20	0	1	1.00	1	0	0	1	0	0
..................................................TTAGTTGCTAACGTGGCCAATATTTC.......................................................................................................................	26	1	1	1.00	1	1	0	0	0	0
............................................................................................................................AAGGCACTTTAGCAGCCAAG...................................................	20	0	1	1.00	1	0	1	0	0	0
..................................................TTAGTTGCTAACGTGGCCAATATC.........................................................................................................................	24	1	1	1.00	1	1	0	0	0	0
...................................................TAGTTGCTAACGTGGCCAATATC.........................................................................................................................	23	1	1	1.00	1	1	0	0	0	0
...........................................................................................................................TAAGGCACTTTAGCAGCCAAGCC.................................................	23	2	1	1.00	1	0	0	0	1	0
...........................................................................................................................TGAGGCACTTTAGCAGCCAAGAA.................................................	23	2	1	1.00	1	0	0	0	1	0
...........................................................................................................................TAAGCCACTTTAGCAGCCAAG...................................................	21	1	1	1.00	1	1	0	0	0	0
....................................................AGTTGCTAACGTGGCCAATATTTC.......................................................................................................................	24	1	1	1.00	1	0	1	0	0	0
........................................................................................................................AAATAAGGCACTTTAGCAGCCAA....................................................	23	0	1	1.00	1	1	0	0	0	0
...........................................................................................................................TAAGGCACTTTAGCAGCCAAGAC.................................................	23	1	1	1.00	1	0	0	0	1	0
...................................................TAGTTGCTAACGTGGCCAATATTTCCA.....................................................................................................................	27	2	1	1.00	1	1	0	0	0	0
...................................................TAGTTGCTAACGTGGCCGATATTTCC......................................................................................................................	26	3	1	1.00	1	1	0	0	0	0
...........................................................................................................................TAATGCACTTTAGCAGCCAAGA..................................................	22	1	1	1.00	1	0	1	0	0	0
..........................................................................................................................ATAAGGCACTTTAGCAGCCAA....................................................	21	0	1	1.00	1	1	0	0	0	0
...........................................................................................................................TAAGGCGCTTTAGCAGCCAAG...................................................	21	1	1	1.00	1	0	1	0	0	0
...........................................................................................................................TAAGGCACTTTAGCAGCCAATA..................................................	22	1	1	1.00	1	1	0	0	0	0
..................................................TTAGTTGCTAACGTGGCCAATATCCC.......................................................................................................................	26	3	1	1.00	1	1	0	0	0	0
..................................................TTAGTTGCTAACGTGGCCAATATTTCC......................................................................................................................	27	2	1	1.00	1	1	0	0	0	0
...........................................................................................................................CAAGGCCCTTTAGCAGCCAATA..................................................	22	3	2	0.50	1	0	0	0	0	1
...........................................................................................................AGCATGCTCGCGAAAATAAC....................................................................	20	3	4	0.25	1	0	1	0	0	0

CAGCAAGAGGGACTTTGGTTCAAAGCTTATCTAAAGCTGAACAACCCATGAATCAACGATTGCACCGGTTATAAACATTATACAAATGCACAATAGTCAAGGTTCCCTCGTACGCACGCTTTTATTCCGTGAAATCGTCGGTTCTCAGGTGTCAGGTTCAGGTCGTAATAGCTATTCAAGCGTAGCTTAGAGTCG *********************************..((....((((.((((.((((((((.((.(((....(((((.........((((((.....(((((...)))))))))))))))).....))))).))))))))...)))))).))......))*********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V110 male body	V056 head
................................................................................................................................................................................CAAGCGTAGCCTAGAGTCC	19	2	2	0.50	1	1	0
...............................................ATGAATCGACGATTGGA...................................................................................................................................	17	2	19	0.05	1	0	1

Species	Coordinate	ID	Type	Alignment
droMoj3	scaffold_6328:2897908-2898102 -	dmo_89	candidate-rescued	GTCGTTCTCCCTGAAACCAAGTTTCGAATAGATTTCGACTTGTTGGGTACTTAGTTGCTAACGTGGCCAATATTTGTAATATGTTTACGTGTTATCAGTTCCAAGGGAGCATGCGTGCGAAAATAAGGCACTTTAGCAGCCAAGAGTCCACAGTCCAAGTCCAGCATTAT----CGATAAGTTCGCATC-----GAATCTCAGC
droVir3	scaffold_13042:903301-903482 -	dvi_110	confident	-------------AGATCGTGTTTGGTGAGGTTACCGACTTGTTGGGCACTTAGTTGCTAATGTGGCCGATATTTTCAATATGTT---GTGTTAATA-TTGCATGGG--CAT--ATGCAAAAATAAGGCACTTTAGCAGCCAAGAGTCCACAGTCCGAGTCCAGCATTAAAAACCGA-GAGTCTATGCCAAAGAAAACCTAAAC

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droMoj3

GTCGTTCTCCCTGAAACCAAGTTTCGAATAGATTTCGACTTGTTGGGTACTTAGTTGCTAACGTGGCCAATATTTGTAATATGTTTACGTGTTATCAGTTCCAAGGGAGCATGCGTGCGAAAATAAGGCACTTTAGCAGCCAAGAGTCCACAGTCCAAGTCCAGCATTAT----CGATAAGTTCGCATC-----GAATCTCAGC	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
..................................................TTAGTTGCTAACGTGGCCAATATTCC................................................................................................................................	26	1	86.00	86	6	0	0	1	0	79
...........................................................................................................................TAAGGCACTTTAGCAGCCAAGA...........................................................	22	1	64.00	64	28	0	1	2	1	32
..................................................TTAGTTGCTAACGTGGCCAATATTCCC...............................................................................................................................	27	1	53.00	53	1	0	0	0	1	51
..........................................................................................................................ATAAGGCACTTTAGCAGCCAAG............................................................	22	1	50.00	50	6	0	2	2	0	40
...................................................TAGTTGCTAACGTGGCCAATATTTCCC..............................................................................................................................	27	1	38.00	38	1	0	0	1	0	36
...........................................................................................................................TAAGGCACTTTAGCAGCCAAG............................................................	21	1	32.00	32	12	0	0	0	0	20
...................................................TAGTTGCTAACGTGGCCAATATTTCC...............................................................................................................................	26	1	28.00	28	1	0	0	0	0	27
..................................................TTAGTTGCTAACGTGGCCAATATTC.................................................................................................................................	25	1	24.00	24	3	0	0	0	0	21
...................................................TAGTTGCTAACGTGGCCAATATTTC................................................................................................................................	25	1	14.00	14	3	0	0	1	0	10
...........................................................................................................................TAAGGCACTTTAGCAGCCAAGT...........................................................	22	1	10.00	10	2	0	0	0	0	8
..................................................TTAGTTGCTAACGTGGCCAATA....................................................................................................................................	22	1	8.00	8	0	0	0	0	0	8
...................................................TAGTTGCTAACGTGGCCAATATTCCC...............................................................................................................................	26	1	6.00	6	0	0	0	0	0	6
..................................................TTAGTTGCTAACGTGGCCAATATT..................................................................................................................................	24	1	5.00	5	0	0	0	0	0	5
..................................................TTAGTTGCTAACGTGGCCAAT.....................................................................................................................................	21	1	4.00	4	0	0	0	0	0	4
..................................................TTAGTTGCTAACGTGGCCAATATTCTC...............................................................................................................................	27	1	3.00	3	0	0	0	0	0	3
...................................................TAGTTGCTAACGTGGCCAATATTCC................................................................................................................................	25	1	3.00	3	0	0	0	0	0	3
............................................................................................................................AAGGCACTTTAGCAGCCAAGA...........................................................	21	1	2.00	2	2	0	0	0	0	0
..................................................TTAGTTGCTAACGTGGCCAATT....................................................................................................................................	22	1	2.00	2	0	0	0	0	0	2
...........................................................................................................................TAAGGCACTTTAGCAGCCAA.............................................................	20	1	1.00	1	0	0	0	0	0	1
....................................................................................TTACGTGTTATCAGTTCCAAGGGAGCA.............................................................................................	27	1	1.00	1	0	0	0	0	0	1
...................................................TAGTTGCTAACGTGGCCAAT.....................................................................................................................................	20	1	1.00	1	0	0	0	1	0	0
..................................................TTAGTTGCTAACGTGGCCAATATTTC................................................................................................................................	26	1	1.00	1	0	0	0	0	0	1
............................................................................................................................AAGGCACTTTAGCAGCCAAG............................................................	20	1	1.00	1	1	0	0	0	0	0
..................................................TTAGTTGCTAACGTGGCCAATATC..................................................................................................................................	24	1	1.00	1	0	0	0	0	0	1
...................................................TAGTTGCTAACGTGGCCAATATC..................................................................................................................................	23	1	1.00	1	0	0	0	0	0	1
...........................................................................................................................TAAGGCACTTTAGCAGCCAAGCC..........................................................	23	1	1.00	1	0	0	0	0	1	0
....................................................AGTTGCTAACGTGGCCAATATTTC................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
........................................................................................................................AAATAAGGCACTTTAGCAGCCAA.............................................................	23	1	1.00	1	0	0	0	0	0	1
...........................................................................................................................TAAGGCACTTTAGCAGCCAAGAC..........................................................	23	1	1.00	1	0	0	0	0	1	0
..........................................................................................................................ATAAGGCACTTTAGCAGCCAA.............................................................	21	1	1.00	1	0	0	0	0	0	1
..................................................TTAGTTGCTAACGTGGCCAATATCCC................................................................................................................................	26	1	1.00	1	0	0	0	0	0	1
..................................................TTAGTTGCTAACGTGGCCAATATTTCC...............................................................................................................................	27	1	1.00	1	0	0	0	0	0	1

droVir3

-------------AGATCGTGTTTGGTGAGGTTACCGACTTGTTGGGCACTTAGTTGCTAATGTGGCCGATATTTTCAATATGTT---GTGTTAATA-TTGCATGGG--CAT--ATGCAAAAATAAGGCACTTTAGCAGCCAAGAGTCCACAGTCCGAGTCCAGCATTAAAAACCGA-GAGTCTATGCCAAAGAAAACCTAAAC	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells	SRR2096013 Ovary_Strain_9_oxidized	SRR2096014 Ovary_Strain_160_oxidized	SRR2096026 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096038 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096050 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096055 Ovary_Min_43	SRR2096056 Ovary_Min_46	SRR2096057 Ovary_Min_50	SRR2096058 Ovary_Min_98	SRR2096059 Ovary_Min_164	SRR2096060 Ovary_Min_193	SRR2096061 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096072 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096079 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096080 embryo_0-2h from 15to16 day old nondysgenic mothers	SRR2096081 embryo_0-2h from 15to16 day old nondysgenic mothers
...........................................................................................................................TAAGGCACTTTAGCAGCCAAGA...........................................................	22	1	20445.00	20445	2	0	42	2	5	282	2	19	0	45	0	0	0	0	5	2	0	0	5	1	639	6	0	2	2	6	1	9	5468	4064	1845	6810	3	388	5	3	0	1	3	750	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	13	0	4	7	1	0	0	1	0	0	0	0	0	0	0	0	0	1
...........................................................................................................................TAAGGCACTTTAGCAGCCAAG............................................................	21	1	6000.00	6000	0	0	10	0	3	146	3	28	0	52	0	0	0	0	3	0	0	0	0	0	426	2	0	0	0	3	2	3	1245	1163	420	1654	1	323	3	1	0	0	2	494	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	12	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TTAGTTGCTAATGTGGCCGATATTC.................................................................................................................................	25	1	1093.00	1093	0	0	0	0	0	35	0	0	0	5	0	0	0	0	0	0	0	0	0	0	72	0	0	0	0	0	0	0	282	161	78	314	0	59	0	0	0	0	0	82	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................TAAGGCACTTTAGCAGCCAAGT...........................................................	22	1	690.00	690	0	0	0	0	0	16	0	2	0	6	0	0	0	0	0	0	0	0	0	0	40	0	1	0	0	0	0	0	171	124	47	185	0	32	0	0	0	0	0	65	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TTAGTTGCTAATGTGGCCGATAT...................................................................................................................................	23	1	482.00	482	0	0	0	0	1	3	0	3	0	1	0	0	0	0	0	0	0	0	0	0	17	0	0	0	1	0	0	1	140	112	42	133	0	10	0	0	0	0	0	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TTAGTTGCTAATGTGGCCGAT.....................................................................................................................................	21	1	405.00	405	0	0	0	0	0	11	0	5	0	8	0	0	0	0	0	0	0	0	0	0	13	0	0	0	0	0	0	0	133	91	26	92	0	8	0	0	0	0	0	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TTAGTTGCTAATGTGGCCGATATT..................................................................................................................................	24	1	334.00	334	0	0	0	0	0	8	0	9	0	5	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	120	56	19	87	0	10	0	0	0	0	0	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TTAGTTGCTAATGTGGCCGATC....................................................................................................................................	22	1	296.00	296	0	0	0	0	0	14	0	0	0	3	0	0	0	0	0	0	0	0	0	0	27	0	0	0	0	0	0	0	54	46	33	74	0	24	0	0	0	0	0	21	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TTAGTTGCTAATGTGGCCGA......................................................................................................................................	20	1	278.00	278	0	0	0	0	0	11	0	42	0	24	0	0	0	0	0	0	0	0	0	0	11	0	0	0	0	0	0	0	45	48	15	36	0	27	0	0	0	0	0	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0
..........................................................................................................................ATAAGGCACTTTAGCAGCCAAG............................................................	22	1	148.00	148	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	12	0	0	0	0	0	0	0	37	29	4	43	0	8	0	0	0	0	0	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TTAGTTGCTAATGTGGCCGATA....................................................................................................................................	22	1	121.00	121	0	0	0	0	0	1	0	5	0	5	0	0	0	0	0	0	0	0	0	0	3	0	0	0	1	0	0	0	48	24	7	22	0	3	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TTAGTTGCTAATGTGGCCGATATTCC................................................................................................................................	26	1	115.00	115	0	0	0	0	0	6	0	0	0	1	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	0	0	20	9	10	38	0	13	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................TAAGGCACTTTAGCAGCCAAGAA..........................................................	23	1	101.00	101	1	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	1	0	0	29	15	9	36	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0
...........................................................................................................................TAAGGCACTTTAGCAGCCAAGTC..........................................................	23	1	100.00	100	0	0	0	0	0	3	0	0	0	2	0	0	0	0	0	0	0	0	0	0	14	0	0	0	0	0	0	0	18	22	6	17	0	8	0	0	0	0	0	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................TAAGGCACTTTAGCAGCCAAGAT..........................................................	23	1	84.00	84	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	26	10	4	36	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TTAGTTGCTAATGTGGCCGATATC..................................................................................................................................	24	1	75.00	75	0	0	0	0	0	3	0	0	0	1	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	13	14	4	19	0	8	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TTAGTTGCTAATGTGGCCGATATCC.................................................................................................................................	25	1	73.00	73	0	0	1	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0	0	8	8	4	23	0	13	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TTAGTTGCTAATGTGGCCGATT....................................................................................................................................	22	1	68.00	68	0	0	0	0	0	3	0	4	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	15	10	8	17	0	5	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................TAAGGCACTTTAGCAGCCAA.............................................................	20	1	53.00	53	0	0	3	0	0	3	0	1	0	1	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	5	5	3	14	0	3	0	0	0	0	0	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TTAGTTGCTAATGTGGCCGATATTT.................................................................................................................................	25	1	43.00	43	0	0	0	0	0	1	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	13	1	9	0	4	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................AATAAGGCACTTTAGCAGCCAA.............................................................	22	1	36.00	36	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	8	9	4	10	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................TAAGGCACTTTAGCAGCCAAGC...........................................................	22	1	31.00	31	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	11	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................TAAGGCACTTTAGCAGCCAAGATC.........................................................	24	1	31.00	31	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	7	1	13	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TTAGTTGCTAATGTGGCCGATCC...................................................................................................................................	23	1	30.00	30	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	4	5	3	8	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................ATAAGGCACTTTAGCAGCCAAGA...........................................................	23	1	30.00	30	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	8	7	3	7	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................TAAGGCACTTTAGCAGCCAAGAG..........................................................	23	1	28.00	28	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	6	1	2	7	0	1	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................TAAGGCACTTTAGCAGCCA..............................................................	19	1	27.00	27	0	0	1	0	0	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	3	5	1	5	0	4	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................AAGGCACTTTAGCAGCCAAGA...........................................................	21	1	20.00	20	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	4	2	3	6	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................TAAGGCACTTTAGCAGCCAAT............................................................	21	1	19.00	19	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	4	4	6	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................ATAAGGCACTTTAGCAGCCAAGT...........................................................	23	1	16.00	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	5	2	0	5	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TTAGTTGCTAATGTGGCCGATAA...................................................................................................................................	23	1	14.00	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	6	0	1	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TTAGTTGCTAATGTGGCCG.......................................................................................................................................	19	1	14.00	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	1	3	0	4	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................TAAGGCACTTTAGCAGCCAAGAC..........................................................	23	1	13.00	13	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	3	3	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................AGTTGCTAATGTGGCCGATATTTTCC..............................................................................................................................	26	1	12.00	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	6	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................TAAGGCACTTTAGCAGCCAAA............................................................	21	1	12.00	12	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	4	2	0	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................TAAGGCACTTTAGCAGCCAAGTT..........................................................	23	1	12.00	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	6	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................AGTTGCTAATGTGGCCGATATTTTCCCC............................................................................................................................	28	1	12.00	12	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	5	1	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................TAGTTGCTAATGTGGCCGATATTT.................................................................................................................................	24	1	11.00	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	3	1	1	4	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................GCACTTTAGCAGCCAAGA...........................................................	18	1	11.00	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	2	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................AGTTGCTAATGTGGCCGATATTTTCCC.............................................................................................................................	27	1	10.00	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................AATAAGGCACTTTAGCAGCCA..............................................................	21	1	8.00	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	1	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................TAAGGCACTTTAGCAGCC...............................................................	18	1	8.00	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................TAAGGCACTTTAGCAGCCAAGG...........................................................	22	1	7.00	7	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................TAAGGCACTTTAGCAGCCAAC............................................................	21	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................ATAAGGCACTTTAGCAGCCAA.............................................................	21	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TTAGTTGCTAATGTGGCCGC......................................................................................................................................	20	1	7.00	7	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................AAGGCACTTTAGCAGCCAAG............................................................	20	1	7.00	7	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	3	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TTAGTTGCTAATGTGGCCGATAC...................................................................................................................................	23	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................TAGTTGCTAATGTGGCCGATATTC.................................................................................................................................	24	1	6.00	6	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................AGGCACTTTAGCAGCCAAGA...........................................................	20	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................TAAGGCACTTTAGCAGCCAAGAAA.........................................................	24	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................ATAAGGCACTTTAGCAGCCAAT............................................................	22	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TTAGTTGCTAATGTGGCCGATTC...................................................................................................................................	23	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................CAAAAATAAGGCACTTTAGCAGCCAAGA...........................................................	28	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................TAAGGCACTTTAGCAGCCAAGTTC.........................................................	24	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................TAGTTGCTAATGTGGCCGATAT...................................................................................................................................	22	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TTAGTTGCTAATGTGGCCGATATTCA................................................................................................................................	26	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................TTCAATATGTT---GTGTTAATA-TTG.......................................................................................................	23	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................TAAGGCACTTTAGCAGCCAAGTCC.........................................................	24	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................TAAGGCACTTTAGCAGCCAACC...........................................................	22	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................TTCAATATGTT---GTGTTAATA-TTGCA.....................................................................................................	25	1	3.00	3	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TTAGTTGCTAATGTGGCCGATATTTC................................................................................................................................	26	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TTAGTTGCTAATGTGGCCGATG....................................................................................................................................	22	1	2.00	2	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TTAGTTGCTAATGTGGCCGAA.....................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TTAGTTGCTAATGTGGCCGATATAA.................................................................................................................................	25	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................CTTAGTTGCTAATGTGGCCGATC....................................................................................................................................	23	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................TAAGGCACTTTAGCAGCCAAGACC.........................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................CTTAGTTGCTAATGTGGCCGATATTC.................................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................TAAGGCACTTTAGCAGCCAAGAGT.........................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TTAGTTGCTAATGTGGCCGATATCCC................................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TTAGTTGCTAATGTGGCCGATATTCCT...............................................................................................................................	27	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................TAAGGCACTTTAGCAGCCACA............................................................	21	1	2.00	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................TAAGGCACTTTAGCAGCCT..............................................................	19	1	2.00	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................AAAAATAAGGCACTTTAGCAGT................................................................	22	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................AATAAGGCACTTTAGCAGCCAAG............................................................	23	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................TAAGGCACTTTAGCAGCCATT............................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................TATGTT---GTGTTAATA-TTGCATGGG--CAT--A.........................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................TAGTTGCTAATGTGGCCGATC....................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................CTTAGTTGCTAATGTGGCCGATATTCC................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TTAGTTGCTAATGTGGCCC.......................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TTAGTTGCTAATGTGGCCGATATTTT................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................AGTTGCTAATGTGGCCGATATT..................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................AAATAAGGCACTTTAGCAGT................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................TGCTAATGTGGCCGATATTC.................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TTAGTTGCTAATGTGGCCGATAAC..................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................TGCTAATGTGGCCGATATTTTCA..............................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................ATAAGGCACTTTAGCAGCCA..............................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................AAAAATAAGGCACTTTAGCAGC................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................TTCAATATGTT---GTGTTAATA-TTGC......................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................TAGTTGCTAATGTGGCCGATATCC.................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TTAGTTGCTAATGTGGCCGATATAG.................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................CTTAGTTGCTAATGTGGCCGATT....................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................TAGTTGCTAATGTGGCCGATATT..................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................AATAAGGCACTTTAGCAGCCAT.............................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................TTCAATATGTT---GTGTTAATA-TTGCAT....................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................ATAAGGCACTTTAGCAGCC...............................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TTAGTTGCTAATGTGGCC........................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................CTTAGTTGCTAATGTGGCCGATAT...................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

-34.0	-34.0	-34.0	-34.0

dmo_89

scaffold_6328:2897958-2898052 -

candidate-rescued

Testes-restricted

intergenic

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads