ID:

dmo_889

 Coordinate:

scaffold_6482:2537852-2538002 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-30.6 -30.1 -30.1

Flybase annnotation

CDS [Dmoj\GI14474-cds]; exon [dmoj_GLEANR_15007:1]; intron [Dmoj\GI14474-in]

Repeatable elements

NameClassFamilyStrand
Helitron1_DmojRCHelitron-
Helitron1_DmojRCHelitron-

Sense Strand Reads

----------------------############################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GTCGGACGTTACCAACTGCGAAATGCCACTCACATCCCATCAGCAATATAGTAAGTCTAGCTCTAATACTATAGAAAATTCAGTTTTTCCCGATTTGCCACGCCACTAATAGGCGTAGACTCCTCATTTTAAGCCAGTTCTTAGAACGAGCTAACGGTAACCTAACTGCATACTTTTGATGCATTTGGGGGTTATTTAAGAAGAACAAAATATTAGCTTATAAAAAGTAAGAAAGCTCTGGTCGACATTGC
**************************************************...((((((..............(((((......)))))...........((((.......)))))))))).(((.(((((((......))))))).))).....((((((((...(((((.......))))).....)))))))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 V056
head
 M060
embryo
 V049
head
......................................................................................................................................................CTAACGGTAACCTAACTGCATACTTT........................................................................... 26 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................................CACGGTAACGTAACTGAAT................................................................................ 19 3 11 0.36 4 4 0 0 0 0
.......................................................................................................................................................TCACGGTAACGTAACTGAAT................................................................................ 20 3 3 0.33 1 0 1 0 0 0
.........................................................................................................................................................ACGGTAACGTAACTGAAT................................................................................ 18 2 4 0.25 1 1 0 0 0 0
..CGGACGGTTCCAACTTCGA...................................................................................................................................................................................................................................... 19 3 5 0.20 1 0 0 1 0 0
..........................................................................................................................................TCTTAGAACGAGCTAACGGTAACCTAAC..................................................................................... 28 0 5 0.20 1 0 0 0 1 0
............................................................................................................................................TTAGAACGAGCTAACGGTAACCTAAC..................................................................................... 26 0 6 0.17 1 0 1 0 0 0
............................................................................................................................................TTAGAACGAGCTAACGGTAACCT........................................................................................ 23 0 7 0.14 1 1 0 0 0 0
...........................................................................................................................................CTTAGAACGAGCTAACGGTAACCTA....................................................................................... 25 0 7 0.14 1 1 0 0 0 0
.........................................................................................................................................TTCTTAGAACGAGCTAACGGTAACC......................................................................................... 25 0 7 0.14 1 1 0 0 0 0
..CGGACGGTTTCAACTGCGA...................................................................................................................................................................................................................................... 19 3 13 0.08 1 0 0 0 0 1
..CGGACGTTTTCAACTTCGA...................................................................................................................................................................................................................................... 19 3 15 0.07 1 0 0 1 0 0
..CGAACGCTTCCAACTGCGA...................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 1
..........................................................................................................................................TCTTAGAACGAGCTAACGGTA............................................................................................ 21 0 20 0.05 1 0 0 1 0 0

Anti-sense strand reads

CAGCCTGCAATGGTTGACGCTTTACGGTGAGTGTAGGGTAGTCGTTATATCATTCAGATCGAGATTATGATATCTTTTAAGTCAAAAAGGGCTAAACGGTGCGGTGATTATCCGCATCTGAGGAGTAAAATTCGGTCAAGAATCTTGCTCGATTGCCATTGGATTGACGTATGAAAACTACGTAAACCCCCAATAAATTCTTCTTGTTTTATAATCGAATATTTTTCATTCTTTCGAGACCAGCTGTAACG
**************************************************...((((((..............(((((......)))))...........((((.......)))))))))).(((.(((((((......))))))).))).....((((((((...(((((.......))))).....)))))))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M060
embryo
 M046
female body
 V110
male body
...........................................CTTATATCATTCAGATCGAGATTA........................................................................................................................................................................................ 24 1 1 1.00 1 0 1 0
....................................................................................AAAAGGGCTAAACGGTGCGGTG................................................................................................................................................. 22 0 2 0.50 1 1 0 0
.......................CCGGTGAGTGTAGGGTAGG................................................................................................................................................................................................................. 19 2 2 0.50 1 1 0 0
..........................CTGAGTGTAGGTTAGTCGT.............................................................................................................................................................................................................. 19 2 8 0.13 1 0 0 1
...............................................................................AGTCAAAAAGGGCTAAACG......................................................................................................................................................... 19 0 17 0.06 1 1 0 0
...................................................................................................................................................CTCGATTGCCCTTAGCTTG..................................................................................... 19 3 20 0.05 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6482:2537802-2538052 + dmo_889 GTCGGACGTT----A-------------CCAA-------------------------CTGCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATGCCACTCACATCCCATCAGCAA---TATAGTAAGTCTAGCTCTAATACTATAGA---------------------AA--------------------------------------------------------ATTCAGTTT-----T-TCCCGATTTGCCACGCCAC-------TAATAGGCGTAGACTCCTCATTTTAAGCCAGTTCTTAGAACGAGCTAACGGTAACCTAACTGCATACTTTTGATGCATTTGGGGGTTATTTAAGAAGAAC-AAAATATTAGCTTATAAA------AAGTAAGAAAGCTCTGGTCGACATTG---C
droVir3 scaffold_13046:3726-3938 + ACTGACCGCA----TT-----A------CTTA-------------------------CTGTCGACTCTACTCA----------------------------------------------------------------------------------------------------------------------------------------------ACAGCCA---------------------------------------------CACCAGCAAA-AAAAAAAATTATAATACTTTCCCCGGTAGGGCTCGAGCTCGCGACAGACCGCACCACTTGC-----------TATGC------------------------CT-----C-TACTCAGCAGCCACACGAA-------C--------------------------------------------------------AATTAAGTACTTATGATAAAAAAAGGA--------------ACTAAAAGAACATTACAAAAC------AAGTAAG-AGGTTCTAGTCGGGAGCT---C
droGri2 scaffold_15203:2904264-2904367 + TAGCGATGAT----A-------------AAAC-------------------------TTTATA--------------------A---ATG-------------------GCATTAAACCATTTGAGCACCATA-------------------------------------------------------------------------------------------------------------------------------------T-----------G-A----------------------------------------------------------TGAATTCAATT-----------------TCTACA-A----TT-----T-TCACAATTTAGA---------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGTAGTCGAGAGAG---C
droWil2 scf2_1100000004514:2347623-2347808 + TTGGAAATAG----A-------------TAAC-------------------------TATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAGGAGCACA-ACAGAATACTCTAAA---------------------AC----------------------------------------------------TTACA-G----AT-----T-TCTCAATTTGGCATTAGATGACTTATTTTAGACTCCTTACTTCTT-----------------AAATACATCTAA--GTGAACTAACTAAAATCTTGTATTTAAGTCAAGGTCGATTTAAA--------AACTATTATTTCAAAGACAGTACAG---------------------AAA---G
dp5 4_group4:583395-583497 - GCCGGTAGTA----TT-----A------CCTT-------------------------TTCAG-----------------------------------------------------------------------------------------------------------------------------------------------AGAGGT------------------------ATGTACAA---------------------TATACAGTGGATAACTTTAAT------------------------------------------------ATTCGG-----------CTTTT------------------------TT-----T-TCTTAACTTCCCACGCGAA-------TAAAATG-------------------------------------------------------------------------------------------------------------------------------------------CATAA---A
droPer2 scaffold_888:8976-9071 + GATGACTATATCTTA-------------CAGA-------------------------GTGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATCTGAACCAGATCGTATAATTAT---TATAGCCAGAATCAC-------------------------------------------------------------------------------------------GAAAACAATTTCACTCTTTCTCGCTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCT---A
droAna3 scaffold_13280:1392081-1392165 + AGCGTCTTTA------------------AAAA-------------------------TAGCA-------------------------------------------------------------------------------------------------------------------------------------------AG--------------------------------GTGTGCCATTTGCGATCGTTCATTTA---TATGGCAGGTATAGATATCATA----------------------------A--------------------------------AC---------------------AAAAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTT---T
droBip1 scf7180000391495:14007-14108 - GTCTGTACTT---TA-------------CCAA-------------------------ATACC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATACCATTTCCGATCGTACAGTTA---TATGGGAGCTACAGC-A----------------------------------------------------------TATAGTCAAAA-----------------ATCAAA-A----AT-----T-ATCCAATTTGGTAG----------------------------------------------------------------------------------------------------------------------------------------------------------------GTC---A
droKik1 scf7180000302706:2434847-2434947 - AACGAAAGTA----A-------------TGAA-------------------------AAACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAA--CAGACACATTTCATTACGAA---TAT-----------CC-----------------------------------------------------------TGAAGGCTTGTCC---TAAC-TATTGGCACAAAAA---ATTGC---CCTTATTGATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTC---A
droFic1 scf7180000452732:5699-5782 + ATGGCAATTT----A-------------CCTA-------------------------TCATGTGATCTTTTCA----------------------------------------------------------------------------------------------------------------------------------------------TTATCGATTTCATGAATATC-------ATTTCCTAATGTCGTG---ATA------------------------------------------------------------------------------------------------------------ATTGGAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTCC---C
droEle1 scf7180000491214:4635941-4636094 - AACAAATAAT----A---------------AT-------------------------CCAAAT--------------------A---ATC-------------------TTATTAGGATACATTTATAATCCATGACCAATCCATTT--------ATTTTT--------------------------------------G------------------------ACTCAAATGCT-------TTTATATAAACAATAA---TAA-------------------AT------------------------------------------------ATTCCA-----------CTTCC------------------------GT-----T-TGCAGCTTTGCCA-GCCAT-------TTAAATGTGTACATTTC----------------------------------------------------------------------------------------------------------------------------------TTAT---T
droRho1 scf7180000769932:961-1186 - GCTAGATCTG----C-------------AAATTTTCGATATTATGTAAATCGTAGTTTTTTTATCTTTAAAAAATGGTTTTTGTTTAAT-TTTAGAAAATTAAATGTTATTATTTATATCCATTTATTATCCCGATAAAATA-ATTTTTTATCGTAATCGAAATACAAATACTGTTAAAGATACTAAAAAGCTCTAGAGCA--------------------------------------------------------------------------------------------------------------------------------------------TAGTAAAAT-----------------ATAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------AAC------AAGAGAGAACGCTATAGTCGAG-TGC---C
droBia1 scf7180000302291:109788-109902 + ATCGAAAGCT----G-------------AGAG-------------------------CCACTGTATATCATAACTACCCCTTGT---G---------------------------------------------------------------------------------------------------------------CACATC-------------------------------------GAT---------GCATATG---TATAGTAAGGATAGCTCTGTC----------------------------------------------------------------------------------TCTAAAGA----CT-----T-ACCCAGTTTTTCATGCAAT----------------------------------------------------------------------------------------------------------------------------------------------------------TTAT---A
droTak1 scf7180000415801:83864-84004 - TTTATACAAA----TT-----G------CG---------------------------TTTATAGCATTTAAAAATACTTTTCAA---A---------------------------------------------------------------------------------------------------------------CGAGAT-------------------------------------GCA---------GCACA------------AGTCTAGCTTTAGTAGTATAGA---------------------AGTTACGGCTTTCCGAA--TTTTA----------------------------------------------------------------GCTAT-------TTATAGCTGTTTTCCCCTTA---------------------------------AACTAGCT------------------------------------------------------------------------------------AGTTTT---T
droEug1 scf7180000409760:739781-739948 + ATCAGCTATT----TTAAGCTCACGTCGTGAA-------------------------AAACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACACAGTCCTTGAAAGT----------------------------------GTATT---------------------TATTATGTCCACCTCAG--ATTTAT-----------CT---TATTTTATCAGAATTGAA-------------------------------AAT-------TAGTAGAC--AGACACCTAAGTGCAAATTCGTTCTAAAAACTCACTTACTTTATACTTACTG-------------------------------------------------------------------------------------CATG---C
dm3 chr3L:11504720-11504790 - GACAAACTGC----G-------------TTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTATAAATAATAGGTCTTTAA---TATAGGCTGAGTAAATATAATA----------------------------A--------------------------------TA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------AA---------------------ATA---A
droSim2 3r:12511355-12511440 + GACGATGTT-----A-------------CCGA-------------------------GTGTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAATTGTGTTCGCATTTTGTCTTCAT---TGGGGTTGGAGTTGATCCAGTG----------------------------G--------------------------------AC------------------------CATCCAACA------TTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAT---T
droSec2 scaffold_243:17973-18045 + GCAACCGCCT-----T-----G------TTTA-------------------------ACTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACTTCCTTAA---CGAAGTACGGTTAGGTCCTAA-------A---------------------AA--------------------------------------------------------ATACAATTTC------TCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAA---T
droYak3 v2_chrUn_3514:7556-7659 - TTTTGATTTT----A-------------AAAAA------------------------TTTTTA--------------------A---ATG-------------------AATTTGAATTC---TATAGTAATG--------TCAT------------------------------------------------------------TGGTGTATCGTTATAAATTTTATAA------------------------------------------------------------------------------------------------------------------------------------------------------------T-TTCTGATTCGCAATTCC----------------------------------------------------------------------------------------------------------------------------------------------------------ACTCGCAGAC
droEre2 scaffold_4770:880289-880367 + TAACGAGACC--------------------GA-------------------------CTCAG-----------------------------------------------------------------------------------------------------------------------------------------------AAATGTATCCCT-TCCATTATATAAATGCT-------GGTATTCAAATGTAAG---ATA-------------------A-----------------------------------------------------------------------------------------C---ATTCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTTTT---C

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
GTCGGACGTT----A-------------CCAA-------------------------CTGCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATGCCACTCACATCCCATCAGCAA---TATAGTAAGTCTAGCTCTAATACTATAGA---------------------AA--------------------------------------------------------ATTCAGTTT-----T-TCCCGATTTGCCACGCCAC-------TAATAGGCGTAGACTCCTCATTTTAAGCCAGTTCTTAGAACGAGCTAACGGTAACCTAACTGCATACTTTTGATGCATTTGGGGGTTATTTAAGAAGAAC-AAAATATTAGCTTATAAA------AAGTAAGAAAGCTCTGGTCGACATTG---CSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAACGGTAACCTAACTGCATACTTT.....................................................................................2611.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTAGAACGAGCTAACGGTAACCTAAC...............................................................................................2850.201000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGAACGAGCTAACGGTAACCTAAC...............................................................................................2660.171000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGAACGAGCTAACGGTAACCT..................................................................................................2370.141100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTAGAACGAGCTAACGGTAACCTA.................................................................................................2570.141100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTAGAACGAGCTAACGGTAACC...................................................................................................2570.141100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTAGAACGAGCTAACGGTA......................................................................................................21200.051000100
droVir3
ACTGACCGCA----TT-----A------CTTA-------------------------CTGTCGACTCTACTCA----------------------------------------------------------------------------------------------------------------------------------------------ACAGCCA---------------------------------------------CACCAGCAAA-AAAAAAAATTATAATACTTTCCCCGGTAGGGCTCGAGCTCGCGACAGACCGCACCACTTGC-----------TATGC------------------------CT-----C-TACTCAGCAGCCACACGAA-------C--------------------------------------------------------AATTAAGTACTTATGATAAAAAAAGGA--------------ACTAAAAGAACATTACAAAAC------AAGTAAG-AGGTTCTAGTCGGGAGCT---CSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................TCTACTCA----------------------------------------------------------------------------------------------------------------------------------------------ACAGCCA---------------------------------------------CACCAGCAAA-AA.................................................................................................................................................................................................................................................................................................27200.8016007000000000000000000000304000000002000000000000000000000000000
.................................................................TCTACTCA----------------------------------------------------------------------------------------------------------------------------------------------ACAGCCA---------------------------------------------CACCAGCAAA-A..................................................................................................................................................................................................................................................................................................26200.70140010000000000000000000000030000000001000000000000000000000000000
.................................................................TCTACTCA----------------------------------------------------------------------------------------------------------------------------------------------ACAGCCA---------------------------------------------CACCAGCAAA-...................................................................................................................................................................................................................................................................................................25200.5010006000000000000000000000400000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTACTTATGATAAAAAAAGGA--------------ACT......................................................27200.459000000000000000000000000100041100000000200000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTTATGATAAAAAAAGGA--------------ACTAAAA..................................................27200.408000000000000000000000000000071000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................C------------------------CT-----C-TACTCAGCAGCCACAC.....................................................................................................................................................................20200.408000000000000000000000000000000800000000000000000000000000000000
.................................................................TCTACTCA----------------------------------------------------------------------------------------------------------------------------------------------ACAGCCA---------------------------------------------CACCAGCAAA-AAA................................................................................................................................................................................................................................................................................................28200.357000000000000000000000000003000000040000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTTATGATAAAAAAAGGA--------------ACTAAA...................................................27200.255000000000000000000000000001120100000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................T-----C-TACTCAGCAGCCACACGAA-------C--------------------------------------------------------AATT..............................................................................................2640.251001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................CTCGAGCTCGCGACAGACCGCACCAC..........................................................................................................................................................................................................................................26200.255001110000000000000000000000000110000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................T-----C-TACTCAGCAGCCACACGAA-------C--------------------------------------------------------AA................................................................................................2440.251001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................C-TACTCAGCAGCCACACGAA-------C--------------------------------------------------------AATT..............................................................................................2540.251000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................T-----C-TACTCAGCAGCCACACGAA-------C--------------------------------------------------------A.................................................................................................2340.251001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................C-TACTCAGCAGCCACACGAA-------...........................................................................................................................................................2040.251001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TAATACTTTCCCCGGTAGGGC...................................................................................................................................................................................................................................................................21200.255000000000000000000000000000020000000102000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TATGC------------------------CT-----C-TACTCAGCAGCCACACG....................................................................................................................................................................2550.201000000000000000000000000000001000000000000000000000000000000000
...............................................................ACTCTACTCA----------------------------------------------------------------------------------------------------------------------------------------------ACAGCCA---------------------------------------------CACCAG........................................................................................................................................................................................................................................................................................................23200.204000000000000000000000000000004000000000000000000000000000000000
.................................................................TCTACTCA----------------------------------------------------------------------------------------------------------------------------------------------ACAGCCA---------------------------------------------CACCAGCAA.....................................................................................................................................................................................................................................................................................................24200.153000000000000000000000000010020000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTTATGATAAAAAAAGGA--------------ACT......................................................24200.153000001000000000000000000000002000000000000000000000000000000000
...............................................................ACTCTACTCA----------------------------------------------------------------------------------------------------------------------------------------------ACAGCCA---------------------------------------------CACC..........................................................................................................................................................................................................................................................................................................21200.153000000000000000000000000000102000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTTATGATAAAAAAAGGA--------------ACTA.....................................................25200.153000000000000000000001000000010100000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................CTCGAGCTCGCGACAGACCGC...............................................................................................................................................................................................................................................21200.153100000000000000000000000000000000200000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................CTCGAGCTCGCGACAGACCGCACCACT.........................................................................................................................................................................................................................................27150.132200000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................C-----------TATGC------------------------CT-----C-TACTCAGCAGCC.........................................................................................................................................................................21200.102000000000000000000000000000000020000000000000000000000000000000
..............................TA-------------------------CTGTCGACTCTACTCA----------------------------------------------------------------------------------------------------------------------------------------------ACA...............................................................................................................................................................................................................................................................................................................................................................21200.102000000000000000000000000000000000000000200000000000000000000000
.................................................................................................................................................................................................................................................................................................TAATACTTTCCCCGGTAGGG....................................................................................................................................................................................................................................................................20200.102000000000000000000001000000010000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-AGGTTCTAGTCGGGAGC.....18200.102000000100000000000000000000000000000000000000010000000000000000
.................................................................TCTACTCA----------------------------------------------------------------------------------------------------------------------------------------------ACAGCCA---------------------------------------------CACCAGCA......................................................................................................................................................................................................................................................................................................23200.102000000000000000000000000000020000000000000000000000000000000000
.................................................................TCTACTCA----------------------------------------------------------------------------------------------------------------------------------------------ACAGCCA---------------------------------------------CACCAGC.......................................................................................................................................................................................................................................................................................................22200.102000000000000000000000000000000000020000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................CTCGAGCTCGCGACAGACCGCACC............................................................................................................................................................................................................................................24200.102100000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TCGAGCTCGCGACAGACCGCACC............................................................................................................................................................................................................................................23200.102200000000000000000000000000000000000000000000000000000000000000
...........................................................GTCGACTCTACTCA----------------------------------------------------------------------------------------------------------------------------------------------ACAGCCA---------------------------------------------CACCAGCA......................................................................................................................................................................................................................................................................................................29200.102002000000000000000000000000000000000000000000000000000000000000
................................................................CTCTACTCA----------------------------------------------------------------------------------------------------------------------------------------------ACAGCCA---------------------------------------------CACCAGCAAA-A..................................................................................................................................................................................................................................................................................................27200.102000000000000000000000000000000000020000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTACTTATGATAAAAAAAGGA--------------AC.......................................................26200.102000000000000000000000000000000110000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTTATGATAAAAAAAGGA--------------ACTAAAA..................................................28200.102000000000000000000000000000011000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTACTTATGATAAAAAAAGGA--------------AC.......................................................25200.102000000000000000000000000000110000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TTCCCCGGTAGGGCTCGAGC.............................................................................................................................................................................................................................................................20150.071001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................CTCGAGCTCGCGACAGACCGCACCACTT........................................................................................................................................................................................................................................28150.071001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................CCCGGTAGGGCTCGAGCTCGC.........................................................................................................................................................................................................................................................21170.061010000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................C------------------------CT-----C-TACTCAGCAGCCACA......................................................................................................................................................................19200.051000000010000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................AGCTCGCGACAGACCGCACC............................................................................................................................................................................................................................................20200.051000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAG-AGGTTCTAGTCGGGAGC.....21200.051000000000000000000000000000000000000000000000000000010000000000
...........................................................................................................................................................................................................................................................................................................................CTCGCGACAGACCGCACCAC..........................................................................................................................................................................................................................................20200.051000000000000000000000000000010000000000000000000000000000000000
...........................................................GTCGACTCTACTCA----------------------------------------------------------------------------------------------------------------------------------------------ACAGCCA---------------------------------------------C.............................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GCTCGCGACAGACCGCACCA...........................................................................................................................................................................................................................................20200.051000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................GGCTCGAGCTCGCGACAGACC.................................................................................................................................................................................................................................................21200.051000001000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................TTGC-----------TATGC------------------------CT-----C-TACTCAGCAGC..........................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................CACTTGC-----------TATGC------------------------CT-----C-TACTCAGCAGCC.........................................................................................................................................................................27200.051000000000000000000000000010000000000000000000000000000000000000
...........................................................GTCGACTCTACTCA----------------------------------------------------------------------------------------------------------------------------------------------ACAGCCA---------------------------------------------CACCAG........................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000100000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................CACCACTTGC-----------TATGC------------------------CT-----C-TACTCAGC.............................................................................................................................................................................26200.051000000000000000000000000000000000001000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................CTTGC-----------TATGC------------------------CT-----C-TACTCAGCAGCC.........................................................................................................................................................................25200.051000100000000000000000000000000000000000000000000000000000000000
..............TT-----A------CTTA-------------------------CTGTCGACTCTACTCA----------------------------------------------------------------------------------------------------------------------------------------------..................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000000001000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TAATACTTTCCCCGGTAGGGCT..................................................................................................................................................................................................................................................................22200.051000000001000000000000000000000000000000000000000000000000000000
................................................................CTCTACTCA----------------------------------------------------------------------------------------------------------------------------------------------ACAGCCA---------------------------------------------CACCAGCA......................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000010000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................GCTCGAGCTCGCGACAGACCG................................................................................................................................................................................................................................................21200.051100000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................CTCGAGCTCGCGACAGACC.................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000000100000000000000000000000
......................................................................................................................................................................................................................................................................................................................TCGAGCTCGCGACAGACCG................................................................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
................................................................CTCTACTCA----------------------------------------------------------------------------------------------------------------------------------------------ACAGCCA---------------------------------------------CACC..........................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTACTTATGATAAAAAAAGG........................................................................22200.051000000000000000000000000000010000000000000000000000000000000000
....................................................................ACTCA----------------------------------------------------------------------------------------------------------------------------------------------ACAGCCA---------------------------------------------CACCAGCAAA-A..................................................................................................................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
.CTGACCGCA----TT-----A------CTTA-------------------------CTGTCGACTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000001000000000000000000000000000000000000
..................................................................CTACTCA----------------------------------------------------------------------------------------------------------------------------------------------ACAGCCA---------------------------------------------CACCAGCAAA-AAA................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000000001000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TCGCGACAGACCGCACC............................................................................................................................................................................................................................................17200.051000000000000000000000000000000000000000000000000000000000000001
..............................................................................................................................................................................................................................................................................................................................GCGACAGACCGCACCACTTGC-----------TATGC------------------------C.............................................................................................................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................CTCA----------------------------------------------------------------------------------------------------------------------------------------------ACAGCCA---------------------------------------------CACCAGCAAA-AAA................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000100000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTTATGATAAAAAAAGGA--------------A........................................................22200.051000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................CTCGCGACAGACCGCACCACTTGC-----------TA.........................................................................................................................................................................................................................26200.051000000000000000000000000001000000000000000000000000000000000000
...............T-----A------CTTA-------------------------CTGTCGACTCTACTCA----------------------------------------------------------------------------------------------------------------------------------------------ACAGC.............................................................................................................................................................................................................................................................................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................CAGACCGCACCACTTGC-----------TATG.......................................................................................................................................................................................................................21200.051000000000000000000000000010000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGATAAAAAAAGGA--------------ACTAAAA..................................................23200.051000000000000000000000000000000100000000000000000000000000000000
.................................................................TCTACTCA----------------------------------------------------------------------------------------------------------------------------------------------ACAGCCA---------------------------------------------CACC..........................................................................................................................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTTATGATAAAAAAAGGA--------------ACTAAA...................................................26200.051000000000000000000000000000010000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................GAGCTCGCGACAGACCGCACC............................................................................................................................................................................................................................................21200.051000000000000000000000000000000010000000000000000000000000000000
..................................................................CTACTCA----------------------------------------------------------------------------------------------------------------------------------------------ACAGCCA---------------------------------------------CACCAGCAAA-AAAA...............................................................................................................................................................................................................................................................................................28200.051000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TCGAGCTCGCGACAGACCGC...............................................................................................................................................................................................................................................20200.051000000000000000000001000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTACTTATGATAAAAAAAGGA--------------.........................................................24200.051000000000000000000000000000010000000000000000000000000000000000
...............................................................ACTCTACTCA----------------------------------------------------------------------------------------------------------------------------------------------ACAGCCA---------------------------------------------CAC...........................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTATGATAAAAAAAGGA--------------ACTAAAA..................................................26200.051000000000000000000000000000010000000000000000000000000000000000
............................CTTA-------------------------CTGTCGACTCTACTCA----------------------------------------------------------------------------------------------------------------------------------------------ACAG..............................................................................................................................................................................................................................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTAAG-AGGTTCTAGTCGGGAGC.....24200.051000000000100000000000000000000000000000000000000000000000000000
...............................................................ACTCTACTCA----------------------------------------------------------------------------------------------------------------------------------------------ACAGCCA---------------------------------------------CACCAGC.......................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000001000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................TAGGGCTCGAGCTCGCGACAGACC.................................................................................................................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................CTCGAGCTCGCGACAGACCGCAA.............................................................................................................................................................................................................................................23200.051000000000000000000000000000000010000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TCGCGACAGACCGCACCACTTGC-----------TATG.......................................................................................................................................................................................................................27200.051000000000000000000000000000000100000000000000000000000000000000
..........................................................TGTCGACTCTACTCA----------------------------------------------------------------------------------------------------------------------------------------------ACAGCCA---------------------------------------------CACCA.........................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TATGC------------------------CT-----C-TACTCAGCAGCC.........................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................ATGC------------------------CT-----C-TACTCAGCAGCCACAC.....................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................GCTCGAGCTCGCGACAGACCGCACCA...........................................................................................................................................................................................................................................26200.051000000000000000000001000000000000000000000000000000000000000000
...............................................................ACTCTACTCA----------------------------------------------------------------------------------------------------------------------------------------------ACAGCCA---------------------------------------------CACCA.........................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000001000000000000000000000000000000000000
......CGCA----TT-----A------CTTA-------------------------CTGTCGACTCTACTCA----------------------------------------------------------------------------------------------------------------------------------------------A.................................................................................................................................................................................................................................................................................................................................................................28200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTTATGATAAAAAAAGGA--------------.........................................................21200.051000000000000000000000000100000000000000000000000000000000000000
droGri2
TAGCGATGAT----A-------------AAAC-------------------------TTTATA--------------------A---ATG-------------------GCATTAAACCATTTGAGCACCATA-------------------------------------------------------------------------------------------------------------------------------------T-----------G-A----------------------------------------------------------TGAATTCAATT-----------------TCTACA-A----TT-----T-TCACAATTTAGA---------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGTAGTCGAGAGAG---CSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
TTGGAAATAG----A-------------TAAC-------------------------TATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAGGAGCACA-ACAGAATACTCTAAA---------------------AC----------------------------------------------------TTACA-G----AT-----T-TCTCAATTTGGCATTAGATGACTTATTTTAGACTCCTTACTTCTT-----------------AAATACATCTAA--GTGAACTAACTAAAATCTTGTATTTAAGTCAAGGTCGATTTAAA--------AACTATTATTTCAAAGACAGTACAG---------------------AAA---GSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
dp5
GCCGGTAGTA----TT-----A------CCTT-------------------------TTCAG-----------------------------------------------------------------------------------------------------------------------------------------------AGAGGT------------------------ATGTACAA---------------------TATACAGTGGATAACTTTAAT------------------------------------------------ATTCGG-----------CTTTT------------------------TT-----T-TCTTAACTTCCCACGCGAA-------TAAAATG-------------------------------------------------------------------------------------------------------------------------------------------CATAA---ASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
GATGACTATATCTTA-------------CAGA-------------------------GTGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATCTGAACCAGATCGTATAATTAT---TATAGCCAGAATCAC-------------------------------------------------------------------------------------------GAAAACAATTTCACTCTTTCTCGCTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCT---ASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................A-------------------------GTGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATCTGAACCAGA................................................................................................................................................................................................................................................................................................................................20200.051000001
................................................................................................................................................................................................................................................TGAACCAGATCGTATAATTAT---TATAG............................................................................................................................................................................................................................................................................................................26200.051100000
....................................................................................................................................................................................................................................................................................CAC-------------------------------------------------------------------------------------------GAAAACAATTTCACTCTTTCTC.................................................................................................................................................................................25200.051010000
..........................................................................................................................................................................................................................................................................TAGCCAGAATCAC-------------------------------------------------------------------------------------------GAAAACA................................................................................................................................................................................................20200.051000001
droAna3
AGCGTCTTTA------------------AAAA-------------------------TAGCA-------------------------------------------------------------------------------------------------------------------------------------------AG--------------------------------GTGTGCCATTTGCGATCGTTCATTTA---TATGGCAGGTATAGATATCATA----------------------------A--------------------------------AC---------------------AAAAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTT---TSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
GTCTGTACTT---TA-------------CCAA-------------------------ATACC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATACCATTTCCGATCGTACAGTTA---TATGGGAGCTACAGC-A----------------------------------------------------------TATAGTCAAAA-----------------ATCAAA-A----AT-----T-ATCCAATTTGGTAG----------------------------------------------------------------------------------------------------------------------------------------------------------------GTC---ASizeHit CountTotal NormTotal
No Reads
droKik1
AACGAAAGTA----A-------------TGAA-------------------------AAACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAA--CAGACACATTTCATTACGAA---TAT-----------CC-----------------------------------------------------------TGAAGGCTTGTCC---TAAC-TATTGGCACAAAAA---ATTGC---CCTTATTGATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTC---ASizeHit CountTotal NormTotal
No Reads
droFic1
ATGGCAATTT----A-------------CCTA-------------------------TCATGTGATCTTTTCA----------------------------------------------------------------------------------------------------------------------------------------------TTATCGATTTCATGAATATC-------ATTTCCTAATGTCGTG---ATA------------------------------------------------------------------------------------------------------------ATTGGAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTCC---CSizeHit CountTotal NormTotal
No Reads
droEle1
AACAAATAAT----A---------------AT-------------------------CCAAAT--------------------A---ATC-------------------TTATTAGGATACATTTATAATCCATGACCAATCCATTT--------ATTTTT--------------------------------------G------------------------ACTCAAATGCT-------TTTATATAAACAATAA---TAA-------------------AT------------------------------------------------ATTCCA-----------CTTCC------------------------GT-----T-TGCAGCTTTGCCA-GCCAT-------TTAAATGTGTACATTTC----------------------------------------------------------------------------------------------------------------------------------TTAT---TSizeHit CountTotal NormTotal
No Reads
droRho1
GCTAGATCTG----C-------------AAATTTTCGATATTATGTAAATCGTAGTTTTTTTATCTTTAAAAAATGGTTTTTGTTTAAT-TTTAGAAAATTAAATGTTATTATTTATATCCATTTATTATCCCGATAAAATA-ATTTTTTATCGTAATCGAAATACAAATACTGTTAAAGATACTAAAAAGCTCTAGAGCA--------------------------------------------------------------------------------------------------------------------------------------------TAGTAAAAT-----------------ATAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------AAC------AAGAGAGAACGCTATAGTCGAG-TGC---CSizeHit CountTotal NormTotal
No Reads
droBia1
ATCGAAAGCT----G-------------AGAG-------------------------CCACTGTATATCATAACTACCCCTTGT---G---------------------------------------------------------------------------------------------------------------CACATC-------------------------------------GAT---------GCATATG---TATAGTAAGGATAGCTCTGTC----------------------------------------------------------------------------------TCTAAAGA----CT-----T-ACCCAGTTTTTCATGCAAT----------------------------------------------------------------------------------------------------------------------------------------------------------TTAT---ASizeHit CountTotal NormTotal
No Reads
droTak1
TTTATACAAA----TT-----G------CG---------------------------TTTATAGCATTTAAAAATACTTTTCAA---A---------------------------------------------------------------------------------------------------------------CGAGAT-------------------------------------GCA---------GCACA------------AGTCTAGCTTTAGTAGTATAGA---------------------AGTTACGGCTTTCCGAA--TTTTA----------------------------------------------------------------GCTAT-------TTATAGCTGTTTTCCCCTTA---------------------------------AACTAGCT------------------------------------------------------------------------------------AGTTTT---TSizeHit CountTotal NormTotal
No Reads
droEug1
ATCAGCTATT----TTAAGCTCACGTCGTGAA-------------------------AAACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACACAGTCCTTGAAAGT----------------------------------GTATT---------------------TATTATGTCCACCTCAG--ATTTAT-----------CT---TATTTTATCAGAATTGAA-------------------------------AAT-------TAGTAGAC--AGACACCTAAGTGCAAATTCGTTCTAAAAACTCACTTACTTTATACTTACTG-------------------------------------------------------------------------------------CATG---CSizeHit CountTotal NormTotal
No Reads
dm3
GACAAACTGC----G-------------TTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTATAAATAATAGGTCTTTAA---TATAGGCTGAGTAAATATAATA----------------------------A--------------------------------TA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------AA---------------------ATA---ASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................TAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTATAAATAAT..............................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................GTCTTTAA---TATAGGCTGAGTA....................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GACGATGTT-----A-------------CCGA-------------------------GTGTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAATTGTGTTCGCATTTTGTCTTCAT---TGGGGTTGGAGTTGATCCAGTG----------------------------G--------------------------------AC------------------------CATCCAACA------TTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAT---TSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
GCAACCGCCT-----T-----G------TTTA-------------------------ACTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACTTCCTTAA---CGAAGTACGGTTAGGTCCTAA-------A---------------------AA--------------------------------------------------------ATACAATTTC------TCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAA---TSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................................................................................................................................................................................................TCCTTAA---CGAAGTACGGTTAGGTCC...............................................................................................................................................................................................................................................................................................2511.0011000
droYak3
TTTTGATTTT----A-------------AAAAA------------------------TTTTTA--------------------A---ATG-------------------AATTTGAATTC---TATAGTAATG--------TCAT------------------------------------------------------------TGGTGTATCGTTATAAATTTTATAA------------------------------------------------------------------------------------------------------------------------------------------------------------T-TTCTGATTCGCAATTCC----------------------------------------------------------------------------------------------------------------------------------------------------------ACTCGCAGACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
TAACGAGACC--------------------GA-------------------------CTCAG-----------------------------------------------------------------------------------------------------------------------------------------------AAATGTATCCCT-TCCATTATATAAATGCT-------GGTATTCAAATGTAAG---ATA-------------------A-----------------------------------------------------------------------------------------C---ATTCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTTTT---CSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/17/2015 at 11:17 PM