ID:

dmo_880

 Coordinate:

scaffold_6482:2382828-2382978 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-32.9 -32.8 -32.7

Flybase annnotation

exon [dmoj_GLEANR_15003:10]; CDS [Dmoj\GI14470-cds]; intron [Dmoj\GI14470-in]

Repeatable elements

NameClassFamilyStrand
ISFUN1RCHelitron-
Homo6DNAhAT-Pegasus-
mature
  1. scaffold_2492:848-867 +
  2. scaffold_3419:961-980 +
  3. scaffold_4402:277-296 +
  4. scaffold_5816:831-850 +
  5. scaffold_6473:1644051-1644070 +
  6. scaffold_6473:11602901-11602920 +
  7. scaffold_6473:16111217-16111236 +
  8. scaffold_6482:287723-287742 +
  9. dmo_880  scaffold_6482:2382883-2382902 +
  10. scaffold_6496:25967107-25967126 +
  11. scaffold_6496:26645895-26645914 +
  12. scaffold_6497:147763-147782 +
  13. scaffold_6498:3195854-3195873 +
  14. scaffold_6500:8022150-8022169 +
  15. scaffold_6500:29372418-29372437 +
  16. scaffold_6500:29752933-29752952 +
  17. scaffold_6500:30057390-30057409 +
  18. scaffold_6540:959544-959563 +
  19. scaffold_6541:1099723-1099742 +
  20. scaffold_6680:24304828-24304847 +
  21. scaffold_2536:7616-7635 -
  22. scaffold_4235:1464-1483 -
  23. scaffold_4663:962-981 -
  24. scaffold_4672:82056-82075 -
  25. scaffold_6473:6983160-6983179 -
  26. scaffold_6496:14201066-14201085 -
  27. scaffold_6498:1216052-1216071 -
  28. scaffold_6500:27130957-27130976 -
  29. scaffold_6500:27655042-27655061 -
  30. scaffold_6500:32166192-32166211 -
  31. scaffold_6522:1157-1176 -
  32. scaffold_6540:849976-849995 -
  33. scaffold_6540:1059039-1059058 -
  34. scaffold_6540:1243486-1243505 -
  35. scaffold_6540:1369913-1369932 -
  36. scaffold_6540:28619641-28619660 -
  37. scaffold_6540:30927655-30927674 -
  38. scaffold_6541:1066167-1066186 -
  39. scaffold_6680:23013652-23013671 -
  40. scaffold_6680:23014533-23014552 -
  41. scaffold_25:1156-1175 -
  42. scaffold_562:647-666 -
  43. scaffold_2654:563-582 -
  44. scaffold_3988:3074-3093 -
  45. scaffold_4309:3592-3611 -
  46. scaffold_5096:789-808 -
  47. scaffold_6318:49424-49443 -
  48. scaffold_6370:5551-5570 -
  49. scaffold_6473:336871-336890 -
  50. scaffold_6496:4639555-4639574 -
  51. scaffold_6496:6494496-6494515 -
  52. scaffold_6496:26833411-26833430 -
  53. scaffold_6496:26834040-26834059 -
  54. scaffold_6498:2341860-2341879 -
  55. scaffold_6500:6339145-6339164 -
  56. scaffold_6500:30709554-30709573 -
  57. scaffold_6501:307412-307431 -
  58. scaffold_6541:683316-683335 -
  59. scaffold_6680:22873237-22873256 -
  60. scaffold_6680:24656237-24656256 -
  61. scaffold_1873:329-348 +
  62. scaffold_4185:344-363 +
  63. scaffold_6359:2673052-2673071 +
  64. scaffold_6473:12140328-12140347 +
  65. scaffold_6482:2624593-2624612 +
  66. scaffold_6491:171551-171570 +
  67. scaffold_6491:197362-197381 +
  68. scaffold_6491:198178-198197 +
  69. scaffold_6496:5881666-5881685 +
  70. scaffold_6496:25190180-25190199 +
  71. scaffold_6498:528573-528592 +
  72. scaffold_6500:9982132-9982151 +
  73. scaffold_6500:11225694-11225713 +
  74. scaffold_6500:29932398-29932417 +
  75. scaffold_6500:30356987-30357006 +
  76. scaffold_6540:4380034-4380053 +
  77. scaffold_6540:28103855-28103874 +
  78. scaffold_6541:1828666-1828685 +
  79. scaffold_6541:2134992-2135011 +
  80. scaffold_6541:2310882-2310901 +
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GACAGACGGACAGGGCTATATCGACTCAGCTCGTCGCCCTGATCCAGAATATATATAGTTTGTGGTGTCGGCCACGCCTTCTTCTGCCATTATACCTTGATTTCCCATTTTCAATGGGTTCAGGGCATAAAAAACCTAATTTGGGCCGTAGTACAATGGTTAAAATTCAATGAAAGTGAACTGACAATATTTCACTTATAGATCTGCAGTCTTCTGCGTGGTGGTATTGCGGAGCGAGGAGGCGTTCGTGT
**************************************************..........((((((....)))))).............((((.((((((...((((((...)))))).)))))).)))).......(((((.((((((......)))))).)))))......(((((((..........)))))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total V056
head
 M046
female body
 M060
embryo
 V049
head
...............................................................................................................................................................................................................................GTATTGCGGAGCGAGGA........... 17 0 1 1.00 1 1 0 0 0
.........................................................................................................CATTTTCAATGGGTTCAGGG.............................................................................................................................. 20 0 20 0.20 4 0 4 0 0
..........................CAGCTCGTCGCCCTGATCCAG............................................................................................................................................................................................................ 21 0 16 0.06 1 0 0 0 1
.....................................................................................................TTCCCATTTTCAATGGGTTCAGGGC............................................................................................................................. 25 0 16 0.06 1 0 0 1 0
........................................................................................................CCATTTTCAATGGGTTCAGGGC............................................................................................................................. 22 0 18 0.06 1 0 0 1 0
.....................................................................................................TTACCATTTTCAATGGGTTCAGGGC............................................................................................................................. 25 1 20 0.05 1 0 0 1 0
.....ACGGACAGGGCTATATCGACT................................................................................................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0
..............GCTATATCGACTCAGCTCGTCGCCCT................................................................................................................................................................................................................... 26 0 20 0.05 1 0 1 0 0
......................GACTCAGCTCGTCGCCCTG.................................................................................................................................................................................................................. 19 0 20 0.05 1 0 1 0 0

Anti-sense strand reads

CTGTCTGCCTGTCCCGATATAGCTGAGTCGAGCAGCGGGACTAGGTCTTATATATATCAAACACCACAGCCGGTGCGGAAGAAGACGGTAATATGGAACTAAAGGGTAAAAGTTACCCAAGTCCCGTATTTTTTGGATTAAACCCGGCATCATGTTACCAATTTTAAGTTACTTTCACTTGACTGTTATAAAGTGAATATCTAGACGTCAGAAGACGCACCACCATAACGCCTCGCTCCTCCGCAAGCACA
**************************************************..........((((((....)))))).............((((.((((((...((((((...)))))).)))))).)))).......(((((.((((((......)))))).)))))......(((((((..........)))))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 M060
embryo
 V049
head
 V056
head
.....................................GGACTAGGTCTTATATATATC................................................................................................................................................................................................. 21 0 1 3.00 3 3 0 0 0 0
.....................................GGGCTAGGTCTTATATATATC................................................................................................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0
.....................................GGACTAGGTCTTATGTATATC................................................................................................................................................................................................. 21 1 2 0.50 1 1 0 0 0 0
.....................................................................................CCGTAATATGGAACTAAAGGTT................................................................................................................................................ 22 2 2 0.50 1 0 0 1 0 0
...........................TCGAGGAGCGGGACTAGGTCT........................................................................................................................................................................................................... 21 1 20 0.30 6 0 4 0 0 2
............................CGAGGAGCGGGACTAGGTCTT.......................................................................................................................................................................................................... 21 1 20 0.30 6 5 1 0 0 0
...................................CGGGACTAGGTCTTATATATAT.................................................................................................................................................................................................. 22 0 9 0.22 2 0 2 0 0 0
.......................................................................................................................................................................GTTACTTTCATTTGACGGTTC............................................................... 21 3 6 0.17 1 1 0 0 0 0
...........................................................................CGAGAGAAGACGGAAATATG............................................................................................................................................................ 20 3 14 0.14 2 1 1 0 0 0
...................................CGGGACTAGGTCTTATATATA................................................................................................................................................................................................... 21 0 9 0.11 1 1 0 0 0 0
..................................GCGGGACTAGGTCTTATATAT.................................................................................................................................................................................................... 21 0 10 0.10 1 0 0 0 1 0
............................CGAGGAGCGGGACTAGGTCTTA......................................................................................................................................................................................................... 22 1 20 0.10 2 2 0 0 0 0
.............................................................................................................................GTATTTTTTGGATGAAAG............................................................................................................ 18 2 14 0.07 1 0 1 0 0 0
............................CGAGGAGCGGGACTAGGTCT........................................................................................................................................................................................................... 20 1 20 0.05 1 1 0 0 0 0
..........................TTCGAGGAGCGGGACTAGGTCT........................................................................................................................................................................................................... 22 2 20 0.05 1 1 0 0 0 0
..........................GTCGAGGAGCGGGACTAGGTC............................................................................................................................................................................................................ 21 1 20 0.05 1 1 0 0 0 0
.................................AGCGGGACTAGGTCTTATATA..................................................................................................................................................................................................... 21 0 20 0.05 1 0 1 0 0 0
...............GATATAGCTGAGTCGAGCAGCGG..................................................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0
..............................AGGAGCGGGACTAGGTCTT.......................................................................................................................................................................................................... 19 1 20 0.05 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6482:2382778-2383028 + dmo_880 GACAGACGGACAGGGCTATAT--------CGACTCAGCTCGTCGCCCTGATCCAGAATATATA--TAGTT-TGTGGTGTC-GGCCACGCCTTCTTCTGCC-------A-TTA-------------------------------TACCTTGAT-------TTCCCATTTTCAATGGGTTCAGGGCATAAAAAA--CC---T--------------------------------------------------A-A-------T-------------------------------------------------------------TTGGGCCGTAGTACAAT------------------------------G---------GT--------------TA------AAAT-TCAATGAAAGTGAACTGAC--------------------AATA--TTTC-------------------------------ACTTATAGATCTG----------------------------CAGTC------TTCT---G--------------------CGTGGT-GGTATTGCGGA----GCGAGGAGGCG----TT-CGTGT
droVir3 scaffold_12958:3411292-3411535 - GACAGACGGACTTGGCTATAT--------CGACTCGGCTCTTGATGCTGATTAAGAATATATA--TACTT-TATGGGGTC-GGAGATGTCTCCTTCTATG-------CGTTACACATT--------TCACGACAAAATTATAATACCCT--------------C------TGCAA-----GGGTATAAAAAA--TT--AAAATAGAAGCTGATTTGGGAACAACTGTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAG-TGAAGGAAAACAA---------------CCC--------------------------GTA---------------C----AACAATTATTATAAATATTTG--------------------TTGTA------GTC------------------CG---AGCTTGAT-GGG------------------------------TTTGC
droGri2 scaffold_15116:1257931-1258213 - GACAGACGGAGATGGATATAT--------CGACTCGACTGTTGACCCTGATCAAGAATATA----CACTT-TAC---GTC-GGAGATGCGTCCTTCTGCCTTCCTTCTGTTACATACA--------TTTGCACAAAACCATTATACCCTTTT-------TACCCATTTTTAATGGGTTCGAGGTATAAAAAA--AA---C--------CT----------------------------------------G-A--------------------------------------------------------------------------TCTTTTTCTGAG------------------------------A-------------------------GAAC--TTAATGCGAACTGATTTTTATAAACT--------------------TAA-----------------------------------GCTAATAATAATTAA----------------------------------GCCTTTGACT---GCTAGCTCTGCCGGCGTCTG-GAATAT-----------ATTGACAAGG----CG----CG-CGTGT
droWil2 scf2_1100000004729:1956850-1957122 - GACAGACGGACATGGCTAGAT--------CGACTCGGTTGTTGATCCTGATCAAGAATATATA--TACTT-TGTGGGGTC-GGAGATGCTTCCTTCTGCC-------TGTTACATACA--------TTTTGGCGACTTTAATATACCATTTC--------ACCC------TATGGGTGTATGGTATAAAAAG--AA---T---------------------------------------------------------------------AGAACAAAAGT------------------------------------------TT---------------------------------------------------------------------------------------------GAAGAATAGC--------------------AAAA---GTAAAAGTAAAGTGCAGTAAAAGTGGGTGAAACTAATTATAGATAG----------------------------------ACATTTTCCT---ATATATAGTGTCTGCTAAAG-G------------------------AATGTGTG----TG-TGTGT
dp5 2:24154226-24154433 - GACAGACAGACAGGGCTCAAT--------CGACTTGA-TGTTGATGCTGATCAAGAATATATA--TATTT-TATGGGGTC-GGAAACGATTGCA------------------CATCCA----CTT-TCATCACAAATCTAATATACTCA-AT--------ACTC------AA-----------TACAAAAAA--TA---T----------------------------------------------------------AAAATTT---------------C-CTAA-TAAAA---------------CGT------------------------------------------------------------------------------------TGA-------AAT-TAA-----------ATACGATAATACAAATTGTACCTATAATTTAT------------------------------------------------------------------------------------------TTTA----------------------TA--TGT-A------------------------------AATC
droPer2 scaffold_112:168473-168714 - GACAGACAGACATGGCTCAAT--------CGACTCGGCTATTGATGCTGATCAAGAATATATA--TACTT-TATGGGGTC-GGAAACGATTCCTTCTGGA-------CGTTACACACATCCACTT-TTACCACAAATCTAATATACCCCAAT--------ACTCAT----TTTGAGTATCGGGTATAAAAAG--TA---G----------------------------------------------------A-------------------------------------------------------------------AATT-GAGCATTTTACAAT------------------------------G-------------------------GAAA-----ATATGCACCGGCAACAAAGTTC----------------------AAC--TTTC-------------------------------ACCCATTATTGTG----------------------------AAGCT-----------------------------------------T------------------------------TTAGCAT
droAna3 scaffold_12943:4095835-4096066 + CACAGACGGACATGCTCATAT--------CGACTCAGGAGGTGATCCTGATCAAGAATATATA--TACTT-TATAGGGTC-GGAGATGTCTCCTTCACTG-------CGTTGCACACT--------TTTGACCAAAATTATAATACCCT--------------C------TGCAA-----GGGTATAAAAAA--CC---C-------------------------------------------------CTTTCCCGTGGAATGG---------------GAATGGTAA---AAT----------------TAATG-----------------------------------------G------------------------------------TAA-------AAT------------TAAATGGT--------------------AAAA---TCC-------------------------------ATGTACTGAATAA-ATATTTT--------------------CT----------------G----------------------TA--TGG-A-----------------------------AGTGT
droBip1 scf7180000393732:27384-27564 - GACAGACGGACATG-----AT--------CAACTCAGGAGGTGATCCTGATCAAGAATATATA--TACTT-TATAGGGTC-GGAGATGTCTCCTTCACGT-------CTTTGCCCACT--------TTTGGACAAAATTATAATACCCT--------------C------TGCAA-----GG-------------------------------------------------------------------------------------------------------------------------------------------------------CACAGT------------------------------G---------GT--------------TG------AACT-TGTATGGA--------------------ACCGCGGCCATAAATACT-------------------------------------TATAG---------------------------------------------------------------------------A--TGT-G-----------------------------CTATC
droKik1 scf7180000302660:100217-100442 + GACAGACGGACATGGCTAGAT--------CAACTCGGCTGTTGATGCTGATCAAGAATATATA--TACTT-TATAGGGTC-GGAAAGGTCTCCTTCACTG-------CGTTGCAAACT--------TCTGACTGAAATTATAATACCCT----------------------GCAA-----GGGTATAAAAAA--TG---G----------------------------------------------------C-----------------------------------------CGTATCTCA---------------------------------AAT------------------------------G---------A--------------TGAAAATATG--T-TGAAAAACAGCCAAGTTAT--------------------AATA--TTTT-------------------------------T-------------------------------------------------------TTTA----------------------CACGTTT-ATC---G--------AACATTTG----TGTGGCAG
droFic1 scf7180000453549:108772-109010 - GACAGACGGACAGACGTACATAAATTTTCCGATTCAGATGGTGATGCTGATCAAGAATATATA--TACTT-TATGGGGTC-TAAGGTGTCTCCTTCACTG-------CGTTGCAAACT--------TCTGACTGAAATTATAATACCCTTTT--------GCTC------TGCAA-----GGGTATAAAAAA--CG---A--------------------------------------------------A-A-----------------------------------------CGTATACGA--------------------------------GACT------------------------------A---------AT--------------TA------AAAT-ACGGTGGTTATAATTTGAC--------------------ATTG--TT---------------------------------------------------------------------------------------C--------GTCATGTCCACTTACA-G------------------------AGTCTCCA-----CCGTAGT
droEle1 scf7180000490421:135745-135994 - GACAGACGGACATGGCTAGAT--------CGACTCTCCTAGTGATGCTGATCAATAATATATA--TACTT-TATGGGATC-GGAGATGTCTCCTTCACTG-------CGTTGCAAACT--------TGAGACTTAAATTTTAATATCCT--------------C------TGCAA-----GGGTATAAATAA--GA---A-------ACTATTTTGGT--CGATTGTTTGT--TAGATA------TTCACTTTACCG---------------------------------------------AAACAAGTTGGAAGT-----CT-------------------------------------------------------------------------------------GA-----------AAATGTGTATTTCAATTAGATCTATAACTTTT------------------------------------------------------------------------------------------G--T--------------------GATGAT-GAT------------------------------TTTGC
droRho1 scf7180000777520:14689-14932 - GACAGACGGACATGGCTAGAT--------CGACTCGGCTAGTGATCCTGAACAAGAATGTATA--TACTT-TATAGGGTC-GGAAACGCTTCCTTCTACC-------TGTTACATACT--------TTTGCACGAATACAATATACCCTTTT--------ACTC------TACGAGTAACGGGTATAATAAT--CA---A------------------------------------GAATTGGCA--GCC------AT---AGGGGAATAGAATAATAGT------------------------------------------TT-----------CGAT-------------------------------------AAGAATT--------------------GATAGGAACCCGC-------------------------------AG--------------------------------------------------------------------------------------------------G--------------------AATAAT-AGTATTGCA----GAGAAACC----G--------GGCG
droBia1 scf7180000302025:20714-20917 - GACAGACGGACATCGCTAGAT--------CGACTCGCCTAGTGACGCAGATCAAGAATATACA--TACTT-TATGGGCTC-GAAAACGTCTCCTTTACAG-------CCTTGCAAACT--------TTTG------------------------------------------CAA-----GGGTATAAAACA--GC-------------T----------------------------------------G-A-------------------------------------------------------------------T-TTTCGCCATTGTACAATAATTCAATAAAATAATTGACGTAAGTGAATCG----------------------------------------------------------------------------------TTTC-------------------------------ACTTTTCGTTTCG----------------------------TTTTA------CTTT---T--------------------C-----------------------------------------GTG
droTak1 scf7180000413416:5626-5865 - ---AGACGGACATGGCTAGAT--------CGACTCGGCTAGTGACCCTAATCAAGAATATATA--TACTT-TATGGGATC-GGAAACGCTTCCTTCTAGC-------TGTTACATACT--------TTTGTTGAATATTTTTTTAGTCGTACTATTTAAAACCCGT----TT-------------TGAAAAA--TT-------------------------------------------------------------------AA---------------AAAAGTTAA---AAA----------------ATGTG-----------------------------------------ACTAGAGTGACTAGTTAAAACTTGTTTGTGTTAGTGGTGC------------------T--------------------A-----------TTA--TTTT-------------------------------T-------------------------------------------------------TTCG----------------------CAGCTGT-ATGTCGGA----------------------ACGAG
droEug1 scf7180000407561:330-520 - GACAGACGGACATGGCTCAAT--------CGACTTCGCTGTTGATCCTGATCAAGAATATATA--TACTT-TATAGGGTC-GCAAACGCTTCCTTCTATC-------TGTTACATACT--------TTTCATCGAATCTAGTAAACCCTTTT--------TCTC------CACGAGTAACAGGTATAAAAAT--TA---A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTACAAACTGAC--------------------AACA---GTCAC-ATATGGTA------------------------------CAG--------------------------------------------------------------------------------------------------------------CA
dm3 chrXHet:162509-162731 - GACAGACGAACATGGCTA-AT--------GGACTTGGCTATTGATCCTGGTGAGGAATATATA--TACTTTTGTATCGTCAGGAAACGCTATCTTCTGCC---------TTACT-ACT------TTTTTTAACGAATCTAGTATACCCTTTT--------ACTC------TACGAGTAACGGGTATAAAAAG--GGTTCGA------------------------------------------------------------------------------------------------------------------------------ATATTT--CTAT-------------------------------------GCTTATTAATATCAATGATGG------------------A--------------------ATTGTATTCACAAAAT--ATC-------------------------------AGAT-------------------------------------------------------------------------------A--TGT-A-----------------------------TATAC
droSim2 x:20501439-20501664 + ---AGACGGACAGGGTCAGCT--------GGACTTGGCTATTGATCCTGATCAAGAATATATA--TACTT-TATATAGTC-GGAAACGCTTCCTTTTGCC-------TGTTACATACT--------ATTCATCGAATCTAG-----CTTTGT--------TCTC------TACAAGTAACGGGTATAATTAC--AG---C-------------------------------------------------CAGT---------------------------------------------------------------------CCTGTATATAGCATAAT------------------------------A---------TATT--------------------AATATGAATGTAATATTAAAAAAA--------------------AAAA--TTTC-------------------------------ATATAAAAATCTG----------------------------TGAT---------------------------------------------------------------------------TTCCT
droSec2 scaffold_192:35953-36202 - ---AGACGGACATGGCTAGAT--------CGACTCGGCTATTGATCATCATCAAGAATATATA--TACTT-AAATTAGTC-TGAAACGCTTCCTTCTGCC-------TGTAATACACT--------TTTCAACGAATCTAGTATACCCTTTT--------ACTC------TACGAGTAACGGGTGTAGAAAAAGTT--AGATTTTAAATTGAAGTGAGAA-------------------------------------------------------------------------------------------------------------------CAAT------------------------------G--------------------------------------------------------------------------------------------------------------------------------------TCTTTATTTATGGAAATCCAATTAG-----CAACTGAACT---ACTTATGCTGCCC-CT-------------------------AATAAGCT----GCGAGTCTTTAGC
droYak3 3R:1733933-1734147 + GACAGACGGACATGGCCAGAT--------CGACTCAGCTATTGATCCTGATCAAGAATATATA--TACTT-TATATGGTC-GGAAACGCTTCCTTCTGCC-------TGTTA----CT--------TTTCAACGAATCTAGTATACCCTTTT--------TCAC------TACGAGTAACGGGTATAAAAAT--TC---GAATTATTGCAGA---------------------------------------------------------------------------------------------------------------------------TTCT------------------------------G---------GT--------------TA------AATT-GTACTTAC------ATA-GGTACTTAA------------AATT--TTTC-------------------------------ACAT---GATCTG--------------------------------------------------------------------------------------------------------------TA
droEre2 scaffold_4845:2507089-2507303 + GACAGACGGACATGGC----------------------TATTGATCCTGATCAGGAATATATATGTGCTT-TATATGGTC-GGAAACGCCTTCTTCTGCC-------TGTTACGT--T--------TTTCAT-------------TCCT--------------C------CGCAA-----CGA----------------------------------------TTGTTTCAACTGAACACCGAAA--ACT------ATGACATGG---------------GTGTGGTGAAAA---------------GGTTCAAAGTTAAAACT-GAACATTATACAAT----------------------------------------------------------------------------------------------TCTATTGGATCTAAAATGTTT------------------------------------------------------------------------------------------G--G--------------------TGT----T------------------------------CTGGTGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
GACAGACGGACAGGGCTATAT--------CGACTCAGCTCGTCGCCCTGATCCAGAATATATA--TAGTT-TGTGGTGTC-GGCCACGCCTTCTTCTGCC-------A-TTA-------------------------------TACCTTGAT-------TTCCCATTTTCAATGGGTTCAGGGCATAAAAAA--CC---T--------------------------------------------------A-A-------T-------------------------------------------------------------TTGGGCCGTAGTACAAT------------------------------G---------GT--------------TA------AAAT-TCAATGAAAGTGAACTGAC--------------------AATA--TTTC-------------------------------ACTTATAGATCTG----------------------------CAGTC------TTCT---G--------------------CGTGGT-GGTATTGCGGA----GCGAGGAGGCG----TT-CGTGTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTGCGGA----GCGAGGA................1711.001000100
...................................................................................................................................................................CATTTTCAATGGGTTCAGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................20200.204400000
..................................CAGCTCGTCGCCCTGATCCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21160.061001000
...............................................................................................................................................................TTCCCATTTTCAATGGGTTCAGGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................25160.061000010
..................................................................................................................................................................CCATTTTCAATGGGTTCAGGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................22180.061000010
.....ACGGACAGGGCTATAT--------CGACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000100
..............GCTATAT--------CGACTCAGCTCGTCGCCCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051100000
..............................GACTCAGCTCGTCGCCCTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051100000
droVir3
GACAGACGGACTTGGCTATAT--------CGACTCGGCTCTTGATGCTGATTAAGAATATATA--TACTT-TATGGGGTC-GGAGATGTCTCCTTCTATG-------CGTTACACATT--------TCACGACAAAATTATAATACCCT--------------C------TGCAA-----GGGTATAAAAAA--TT--AAAATAGAAGCTGATTTGGGAACAACTGTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAG-TGAAGGAAAACAA---------------CCC--------------------------GTA---------------C----AACAATTATTATAAATATTTG--------------------TTGTA------GTC------------------CG---AGCTTGAT-GGG------------------------------TTTGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................................................................T--AAAATAGAAGCTGATTTGGGAACAAC.....................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000001000000000000000000000000000000
...................AT--------CGACTCGGCTCTTGATGCTGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2460.171000000000000000000000000000100000000000000000000000000000000000
..................................................TTAAGAATATATA--TACTT-TATGGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.153000000000000000000000000000000030000000000000000000000000000000
.....ACGGACTTGGCTATAT--------CGACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21100.101000000000000000000000000000000000000100000000000000000000000000
.........................................................................TGGGGTC-GGAGATGTCTCCTTCTATG-------C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000010000000000000000000000000000000
........................................................................................TCTCCTTCTATG-------CGTTACACATT--------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000010000000000000000000000000000000000
.................................................................TACTT-TATGGGGTC-GGAGATGTCTCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000000000000100000000000000000000000
.................................................................TACTT-TATGGGGTC-GGAGATGTCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000010000000000000000000000000000
....................................................................TT-TATGGGGTC-GGAGATGTCTCCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000010000000000000000000000000000000000
.........................................................TATATA--TACTT-TATGGGGTC-GG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................TTACACATT--------TCACGACAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000000000001000000000000000000000000000
..............................................................................................TCTATG-------CGTTACACATT--------TCACGACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000000000010000000000000000000000000
...............................................TGATTAAGAATATATA--TACTT-TATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
.........................................................................................CTCCTTCTATG-------CGTTACACATT--------TCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000010000000000000000000000000000000000000
droGri2
GACAGACGGAGATGGATATAT--------CGACTCGACTGTTGACCCTGATCAAGAATATA----CACTT-TAC---GTC-GGAGATGCGTCCTTCTGCCTTCCTTCTGTTACATACA--------TTTGCACAAAACCATTATACCCTTTT-------TACCCATTTTTAATGGGTTCGAGGTATAAAAAA--AA---C--------CT----------------------------------------G-A--------------------------------------------------------------------------TCTTTTTCTGAG------------------------------A-------------------------GAAC--TTAATGCGAACTGATTTTTATAAACT--------------------TAA-----------------------------------GCTAATAATAATTAA----------------------------------GCCTTTGACT---GCTAGCTCTGCCGGCGTCTG-GAATAT-----------ATTGACAAGG----CG----CG-CGTGTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
GACAGACGGACATGGCTAGAT--------CGACTCGGTTGTTGATCCTGATCAAGAATATATA--TACTT-TGTGGGGTC-GGAGATGCTTCCTTCTGCC-------TGTTACATACA--------TTTTGGCGACTTTAATATACCATTTC--------ACCC------TATGGGTGTATGGTATAAAAAG--AA---T---------------------------------------------------------------------AGAACAAAAGT------------------------------------------TT---------------------------------------------------------------------------------------------GAAGAATAGC--------------------AAAA---GTAAAAGTAAAGTGCAGTAAAAGTGGGTGAAACTAATTATAGATAG----------------------------------ACATTTTCCT---ATATATAGTGTCTGCTAAAG-G------------------------AATGTGTG----TG-TGTGTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................TGTGGGGTC-GGAGATGCTTCCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.15300030
............TGGCTAGAT--------CGACTCGGTTGTTGATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.10200020
............................................................ATA--TACTT-TGTGGGGTC-GGAGATGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
...............................................................................................CTGCC-------TGTTACATACA--------TTTTGGCGACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
dp5
GACAGACAGACAGGGCTCAAT--------CGACTTGA-TGTTGATGCTGATCAAGAATATATA--TATTT-TATGGGGTC-GGAAACGATTGCA------------------CATCCA----CTT-TCATCACAAATCTAATATACTCA-AT--------ACTC------AA-----------TACAAAAAA--TA---T----------------------------------------------------------AAAATTT---------------C-CTAA-TAAAA---------------CGT------------------------------------------------------------------------------------TGA-------AAT-TAA-----------ATACGATAATACAAATTGTACCTATAATTTAT------------------------------------------------------------------------------------------TTTA----------------------TA--TGT-A------------------------------AATCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................TATTT-TATGGGGTC-GGAAACGATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24122.753300000126060
.................................................................TATTT-TATGGGGTC-GGAAACGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23120.3340000001030
.................................................................TATTT-TATGGGGTC-GGAAACGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22120.2530000002010
.............................................................TA--TATTT-TATGGGGTC-GGAAACGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25120.2530000002010
............................................TGCTGATCAAGAATATATA--TATTT-TA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26120.2530000000300
.................................................................TATTT-TATGGGGTC-GGAAACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21170.1830000000030
..............................................................A--TATTT-TATGGGGTC-GGAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20180.1120000000020
.............................................................TA--TATTT-TATGGGGTC-GGAAACGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24120.0810000001000
..........................................................ATATA--TATTT-TATGGGGTC-GG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21130.0810100000000
..................................................................ATTT-TATGGGGTC-GGAAACGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21130.0810000001000
...................................................................TTT-TATGGGGTC-GGAAACGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20140.0710100000000
...........................................................TATA--TATTT-TATGGGGTC-GGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21140.0710000001000
.............................................................TA--TATTT-TATGGGGTC-GGAAACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23160.0610000000010
.............................................................TA--TATTT-TATGGGGTC-GGAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22170.0610000000001
......................................TGTTGATGCTGATCAAGAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20180.0610000010000
.................................................................TATTT-TATGGGGTC-GGAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20190.0510000000010
......................................TGTTGATGCTGATCAAGAATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
....................................................................TT-TATGGGGTC-GGAAACGATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100000
..................................................................ATTT-TATGGGGTC-GGAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
............................................................ATA--TATTT-TATGGGGTC-GGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000010000
droPer2
GACAGACAGACATGGCTCAAT--------CGACTCGGCTATTGATGCTGATCAAGAATATATA--TACTT-TATGGGGTC-GGAAACGATTCCTTCTGGA-------CGTTACACACATCCACTT-TTACCACAAATCTAATATACCCCAAT--------ACTCAT----TTTGAGTATCGGGTATAAAAAG--TA---G----------------------------------------------------A-------------------------------------------------------------------AATT-GAGCATTTTACAAT------------------------------G-------------------------GAAA-----ATATGCACCGGCAACAAAGTTC----------------------AAC--TTTC-------------------------------ACCCATTATTGTG----------------------------AAGCT-----------------------------------------T------------------------------TTAGCATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................ACTCAT----TTTGAGTATCGGGTA............................................................................................................................................................................................................................................................................................................................................................................................................................................21200.408080000
.................................................ATCAAGAATATATA--TACTT-TA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051010000
...................................................................................................................................................................CAT----TTTGAGTATCGGGTATAAAAAG--TA---..............................................................................................................................................................................................................................................................................................................................................................................................................................27200.051010000
droAna3
CACAGACGGACATGCTCATAT--------CGACTCAGGAGGTGATCCTGATCAAGAATATATA--TACTT-TATAGGGTC-GGAGATGTCTCCTTCACTG-------CGTTGCACACT--------TTTGACCAAAATTATAATACCCT--------------C------TGCAA-----GGGTATAAAAAA--CC---C-------------------------------------------------CTTTCCCGTGGAATGG---------------GAATGGTAA---AAT----------------TAATG-----------------------------------------G------------------------------------TAA-------AAT------------TAAATGGT--------------------AAAA---TCC-------------------------------ATGTACTGAATAA-ATATTTT--------------------CT----------------G----------------------TA--TGG-A-----------------------------AGTGTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............CTCATAT--------CGACTCAGGAGGTGATCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25203.30660660000
............TGCTCATAT--------CGACTCAGGAGGTGATCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.90181800000
.......................................................................................GTCTCCTTCACTG-------CGTTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.75150000015
.................................................................................................CTG-------CGTTGCACACT--------TTTGACCAAAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.357070000
.....................................................................................ATGTCTCCTTCACTG-------CGTTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.306000060
.....................................................................................................................................AAAATTATAATACCCT--------------C------TGCAA-----G................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.204040000
....................................................................TT-TATAGGGTC-GGAGATGTCTCCTTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.204000040
.ACAGACGGACATGCTCATAT--------CGACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.153030000
.....................................................................T-TATAGGGTC-GGAGATGTCTCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.153000030
....................T--------CGACTCAGGAGGTGATCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.153300000
......................................................................................TGTCTCCTTCACTG-------CGTTGCACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.102200000
.....................................................................T-TATAGGGTC-GGAGATGTCTCCTTCAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.102200000
....................................................................................................................CT--------TTTGACCAAAATTATAATACCCT--------------C------T..........................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.102020000
..........................................................................AGGGTC-GGAGATGTCTCCTTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000002
.....ACGGACATGCTCATAT--------CGACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000002
..........................................................................................TCCTTCACTG-------CGTTGCACAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000100
...............TCATAT--------CGACTCAGGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
........GACATGCTCATAT--------CGACTCAGGAGGTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051010000
...................AT--------CGACTCAGGAGGTGATCCTGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
.....................................................................T-TATAGGGTC-GGAGATGTCTCCTTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051010000
..........................................................................AGGGTC-GGAGATGTCTCCTTCACTG-------C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000001
droBip1
GACAGACGGACATG-----AT--------CAACTCAGGAGGTGATCCTGATCAAGAATATATA--TACTT-TATAGGGTC-GGAGATGTCTCCTTCACGT-------CTTTGCCCACT--------TTTGGACAAAATTATAATACCCT--------------C------TGCAA-----GG-------------------------------------------------------------------------------------------------------------------------------------------------------CACAGT------------------------------G---------GT--------------TG------AACT-TGTATGGA--------------------ACCGCGGCCATAAATACT-------------------------------------TATAG---------------------------------------------------------------------------A--TGT-G-----------------------------CTATCSizeHit CountTotal NormTotal
No Reads
droKik1
GACAGACGGACATGGCTAGAT--------CAACTCGGCTGTTGATGCTGATCAAGAATATATA--TACTT-TATAGGGTC-GGAAAGGTCTCCTTCACTG-------CGTTGCAAACT--------TCTGACTGAAATTATAATACCCT----------------------GCAA-----GGGTATAAAAAA--TG---G----------------------------------------------------C-----------------------------------------CGTATCTCA---------------------------------AAT------------------------------G---------A--------------TGAAAATATG--T-TGAAAAACAGCCAAGTTAT--------------------AATA--TTTT-------------------------------T-------------------------------------------------------TTTA----------------------CACGTTT-ATC---G--------AACATTTG----TGTGGCAGSizeHit CountTotal NormTotal
No Reads
droFic1
GACAGACGGACAGACGTACATAAATTTTCCGATTCAGATGGTGATGCTGATCAAGAATATATA--TACTT-TATGGGGTC-TAAGGTGTCTCCTTCACTG-------CGTTGCAAACT--------TCTGACTGAAATTATAATACCCTTTT--------GCTC------TGCAA-----GGGTATAAAAAA--CG---A--------------------------------------------------A-A-----------------------------------------CGTATACGA--------------------------------GACT------------------------------A---------AT--------------TA------AAAT-ACGGTGGTTATAATTTGAC--------------------ATTG--TT---------------------------------------------------------------------------------------C--------GTCATGTCCACTTACA-G------------------------AGTCTCCA-----CCGTAGTSizeHit CountTotal NormTotal
No Reads
droEle1
GACAGACGGACATGGCTAGAT--------CGACTCTCCTAGTGATGCTGATCAATAATATATA--TACTT-TATGGGATC-GGAGATGTCTCCTTCACTG-------CGTTGCAAACT--------TGAGACTTAAATTTTAATATCCT--------------C------TGCAA-----GGGTATAAATAA--GA---A-------ACTATTTTGGT--CGATTGTTTGT--TAGATA------TTCACTTTACCG---------------------------------------------AAACAAGTTGGAAGT-----CT-------------------------------------------------------------------------------------GA-----------AAATGTGTATTTCAATTAGATCTATAACTTTT------------------------------------------------------------------------------------------G--T--------------------GATGAT-GAT------------------------------TTTGCSizeHit CountTotal NormTotal
No Reads
droRho1
GACAGACGGACATGGCTAGAT--------CGACTCGGCTAGTGATCCTGAACAAGAATGTATA--TACTT-TATAGGGTC-GGAAACGCTTCCTTCTACC-------TGTTACATACT--------TTTGCACGAATACAATATACCCTTTT--------ACTC------TACGAGTAACGGGTATAATAAT--CA---A------------------------------------GAATTGGCA--GCC------AT---AGGGGAATAGAATAATAGT------------------------------------------TT-----------CGAT-------------------------------------AAGAATT--------------------GATAGGAACCCGC-------------------------------AG--------------------------------------------------------------------------------------------------G--------------------AATAAT-AGTATTGCA----GAGAAACC----G--------GGCGSizeHit CountTotal NormTotal
No Reads
droBia1
GACAGACGGACATCGCTAGAT--------CGACTCGCCTAGTGACGCAGATCAAGAATATACA--TACTT-TATGGGCTC-GAAAACGTCTCCTTTACAG-------CCTTGCAAACT--------TTTG------------------------------------------CAA-----GGGTATAAAACA--GC-------------T----------------------------------------G-A-------------------------------------------------------------------T-TTTCGCCATTGTACAATAATTCAATAAAATAATTGACGTAAGTGAATCG----------------------------------------------------------------------------------TTTC-------------------------------ACTTTTCGTTTCG----------------------------TTTTA------CTTT---T--------------------C-----------------------------------------GTGSizeHit CountTotal NormTotal
No Reads
droTak1
---AGACGGACATGGCTAGAT--------CGACTCGGCTAGTGACCCTAATCAAGAATATATA--TACTT-TATGGGATC-GGAAACGCTTCCTTCTAGC-------TGTTACATACT--------TTTGTTGAATATTTTTTTAGTCGTACTATTTAAAACCCGT----TT-------------TGAAAAA--TT-------------------------------------------------------------------AA---------------AAAAGTTAA---AAA----------------ATGTG-----------------------------------------ACTAGAGTGACTAGTTAAAACTTGTTTGTGTTAGTGGTGC------------------T--------------------A-----------TTA--TTTT-------------------------------T-------------------------------------------------------TTCG----------------------CAGCTGT-ATGTCGGA----------------------ACGAGSizeHit CountTotal NormTotal
No Reads
droEug1
GACAGACGGACATGGCTCAAT--------CGACTTCGCTGTTGATCCTGATCAAGAATATATA--TACTT-TATAGGGTC-GCAAACGCTTCCTTCTATC-------TGTTACATACT--------TTTCATCGAATCTAGTAAACCCTTTT--------TCTC------CACGAGTAACAGGTATAAAAAT--TA---A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTACAAACTGAC--------------------AACA---GTCAC-ATATGGTA------------------------------CAG--------------------------------------------------------------------------------------------------------------CASizeHit CountTotal NormTotal
No Reads
dm3
GACAGACGAACATGGCTA-AT--------GGACTTGGCTATTGATCCTGGTGAGGAATATATA--TACTTTTGTATCGTCAGGAAACGCTATCTTCTGCC---------TTACT-ACT------TTTTTTAACGAATCTAGTATACCCTTTT--------ACTC------TACGAGTAACGGGTATAAAAAG--GGTTCGA------------------------------------------------------------------------------------------------------------------------------ATATTT--CTAT-------------------------------------GCTTATTAATATCAATGATGG------------------A--------------------ATTGTATTCACAAAAT--ATC-------------------------------AGAT-------------------------------------------------------------------------------A--TGT-A-----------------------------TATACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................................................TACTTTTGTATCGTCAGGAAACGCTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26136.00360000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000006040100000000110101200000000000000000000000000000000000000000000000000000000000001000001101000000310000000000000002312000000
.........................................................................TATCGTCAGGAAACGCTATCTTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23124.00240000000000000000000000000000000000000030000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011004012010000000000000000000000000000000000000000000000020000001020000000000200100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000
.....................................................................TTTGTATCGTCAGGAAACGCTATCTTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27121.00210000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100200010000100000000000000000000000000000000000000000000001000003010000000000000001000000000000000000000000000000000000000000000000000000000000000000000300000000102000000000000000011000000
.................................TTGGCTATTGATCCTGGTGAGGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24117.00170000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000100000000000000010000000000120101110000000000000000000000000000000000000000000000000000000000000000000101000000100000000000000000011000000
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..................................................................................................................................................................................ACGGGTATAAAAAG--GGTTCGA------------------------------------------------------------------------------------------------------------------------------ATAT..........................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................CTATCTTCTGCC---------TTACT-ACT------T........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TATAAAAAG--GGTTCGA------------------------------------------------------------------------------------------------------------------------------ATATTT--CTA...................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................TTCTGCC---------TTACT-ACT------TTTTTTAACGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------ATTGTATTCACAAAAT--ATC-------------------------------AGA..........................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AACATGGCTA-AT--------GGACTTGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CTTGGCTATTGATCCTGGTGAGGAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................GTAACGGGTATAAAAAG--GGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.......................................................AATATATA--TACTTTTGTATCGTCAGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TGG------------------A--------------------ATTGTATTCACAAAAT--ATC-------------------------------AGA..........................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................TAAAAAG--GGTTCGA------------------------------------------------------------------------------------------------------------------------------ATATTT--CTAT-------------------------------------GCT..........................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TGGCTATTGATCCTGGTGAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..CAGACGAACATGGCTA-AT--------GGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................GCTATTGATCCTGGTGAGGAATATATA--....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TGGCTA-AT--------GGACTTGGCTATTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................CGAGTAACGGGTATAAAAAG--GGTTCG.............................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TATA--TACTTTTGTATCGTCAGGAAACGCTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................CTATTGATCCTGGTGAGGAATAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CGAACATGGCTA-AT--------GGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTATTCACAAAAT--ATC-------------------------------AGA..........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................GGTATAAAAAG--GGTTCGA------------------------------------------------------------------------------------------------------------------------------ATATTT--C.....................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................TCGTCAGGAAACGCTATCTTCTGCC---------T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TGAGGAATATATA--TACTTTTGTATCGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TGGCTATTGATCCTGGTGAGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................TTTTGTATCGTCAGGAAACGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................C------TACGAGTAACGGGTATAAAAAG--GG.................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................TCAGGAAACGCTATCTTCTGCC---------TTAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................TTAATATCAATGATGG------------------A--------------------ATTGTATTCACA.....................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................TAACGGGTATAAAAAG--GG.................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GACTTGGCTATTGATCCTGGTGAGGAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................TATTGATCCTGGTGAGGAATAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................TAACGGGTATAAAAAG--GGTTCA.............................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................................................................TATCTTCTGCC---------TTACT-ACT------TT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CTA-AT--------GGACTTGGCTATTGATCCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................AATATCAATGATGG------------------A--------------------ATTGTA...........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................TTTTGTATCGTCAGGAAACGCTAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................GTAACGGGTATAAAAAG--GGTTA..............................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
......................................TATTGATCCTGGTGAGGAATATA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................ATTGATCCTGGTGAGGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................ATTGATCCTGGTGAGGAATATATA--....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.................................................................TACTTTTGTATCGTCAGGAAACGCATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CTTGGCTATTGATCCTGGTGAGGAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................TC------TACGAGTAACGGGTATAAAAAG--GGT................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................TTTGTATCGTCAGGAAACGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AACATGGCTA-AT--------GGACTTGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................GCTATTGATCCTGGTGAGGAATATA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GACGAACATGGCTA-AT--------GGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................TTTTTTAACGAATCTAGTATACCCTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2621.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TTTGTATCGTCAGGAAACGCTATCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TATTAATATCAATGATGG------------------A--------------------ATTG.............................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TA--TACTTTTGTATCGTCAGGAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................AACGCTATCTTCTGCC---------TTACT-ACT------TT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TATAAAAAG--GGTTCGA------------------------------------------------------------------------------------------------------------------------------ATATTT--CTAT-------------------------------------GCT..........................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................GAATATATA--TACTTTTGTATCGTCAGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................AATGATGG------------------A--------------------ATTGTATTCAC......................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................AAAAG--GGTTCGA------------------------------------------------------------------------------------------------------------------------------ATATTT--CTAT-------------------------------------GCT..........................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..............................................................A--TACTTTTGTATCGTCAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................TACTTTTGTATCGTCAGGAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................CTTTTGTATCGTCAGGAAACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................ATATA--TACTTTTGTATCGTCAGGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
......................................................................................CGCTATCTTCTGCC---------TTACT-AC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................CTTATTAATATCAATGATGG------------------A--------------------ATTT.............................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CTA-AT--------GGACTTGGCTATTGATCCTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................TTGTATCGTCAGGAAACGCTATCTTCTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TATA--TACTTTTGTATCGTCAGGAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................GAGGAATATATA--TACTTTTGTATCGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TA--TACTTTTGTATCGTCAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................TC------TACGAGTAACGGGTATAAAAAG--GGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................T-------------------------------------GCTTATTAATATCAATGATGG------------------A--------------------ATTT.............................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CTTGGCTATTGATCCTGGTGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................GTCAGGAAACGCTATCTTCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................TTGATCCTGGTGAGGAATATATA--TACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................TTTTGTATCGTCAGGAAACGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TATATA--TACTTTTGTATCGTCAGGAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........................................................................GTATCGTCAGGAAACGCTATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TATAAAAAG--GGTTCGA------------------------------------------------------------------------------------------------------------------------------ATATTT--CTAT-------------------------------------GC...........................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TTGGCTATTGATCCTGGTGAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................TCGA------------------------------------------------------------------------------------------------------------------------------ATATTT--CTAT-------------------------------------GCTTATTAA....................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................CGCTATCTTCTGCC---------TTACT-ACT------TTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................AACGCTATCTTCTGCC---------TTACT-ACT------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AGACGAACATGGCTA-AT--------GGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
........................................................................GTATCGTCAGGAAACGCTATCTTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................T--------GGACTTGGCTATTGATCCTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................TACTTTTGTATCGTCAGGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
droSim2
---AGACGGACAGGGTCAGCT--------GGACTTGGCTATTGATCCTGATCAAGAATATATA--TACTT-TATATAGTC-GGAAACGCTTCCTTTTGCC-------TGTTACATACT--------ATTCATCGAATCTAG-----CTTTGT--------TCTC------TACAAGTAACGGGTATAATTAC--AG---C-------------------------------------------------CAGT---------------------------------------------------------------------CCTGTATATAGCATAAT------------------------------A---------TATT--------------------AATATGAATGTAATATTAAAAAAA--------------------AAAA--TTTC-------------------------------ATATAAAAATCTG----------------------------TGAT---------------------------------------------------------------------------TTCCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................GAATATATA--TACTT-TATATAGTC-GGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................262051.001020000000232601794045653000
................................................................................................TGCC-------TGTTACATACT--------ATTCATCGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2518.00800000032120000000
........................................................ATATATA--TACTT-TATATAGTC-GGAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26205.201040020000001250787000
...............................................................................................TTGCC-------TGTTACATACT--------ATTCATCGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.00400000012100000000
............................................................ATA--TACTT-TATATAGTC-GGAAACGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25203.5070000000065608000000
.........................................................................TATAGTC-GGAAACGCTTCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19203.1563000063000000000000
........................................................................................................................................TCTAG-----CTTTGT--------TCTC------TACAAGTAACGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2813.00300000010110000000
....................T--------GGACTTGGCTATTGATCCTGATCAAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.00300000010200000000
.................................................................TACTT-TATATAGTC-GGAAACGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23202.55510010002821000010000
........................................................ATATATA--TACTT-TATATAGTC-GGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24202.10420020000030000010000
.............................................................................................TTTTGCC-------TGTTACATACT--------ATTCATCGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00200000010100000000
...................................................................................................................................TCGAATCTAG-----CTTTGT--------TCTC------TACAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200000000200000000
......CGGACAGGGTCAGCT--------GGACTTGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200000010100000000
................................................................................................TGCC-------TGTTACATACT--------ATTCATCGAATC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200000000020000000
......................................................GAATATATA--TACTT-TATATAGTC-GGAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28201.8036000000000110322000
......................................................GAATATATA--TACTT-TATATAGTC-GGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27201.6032000000000000320000
........................................................ATATATA--TACTT-TATATAGTC-GGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25201.5531000000180058000000
.............................................................TA--TACTT-TATATAGTC-GGAAACGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25201.1022000000120430030000
...............................ACTTGGCTATTGATCCTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18141.0715000001500000000000
.......................................ATTGATCCTGATCAAGAATATATA--....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24201.0521000000091200000000
..........................................................................................................................................TAG-----CTTTGT--------TCTC------TACAAGTAACGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
......CGGACAGGGTCAGCT--------GGACTTGGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000100000000
.................................................................................................................................CATCGAATCTAG-----CTTTGT--------TCTC------TACAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000010000000
..............................................................................................TTTGCC-------TGTTACATACT--------ATTCATCGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
...........AGGGTCAGCT--------GGACTTGGCTATTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000010000000
.........................................................................TATAGTC-GGAAACGCTTCCTTTTGCC-------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2631.00300200000001000000
.......................................................................................................................................................T--------TCTC------TACAAGTAACGGGTATAATTAC--AG---C-------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................3011.00100000010000000000
....................................................................................................................................................TTGT--------TCTC------TACAAGTAACGGGTATAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
................................................................................................TGCC-------TGTTACATACT--------ATTCATCGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000010000000
................CAGCT--------GGACTTGGCTATTGATCCTGATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000100000000
...AGACGGACAGGGTCAGCT--------GGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000001000000
..............................................................................................................TACATACT--------ATTCATCGAATCTAG-----C..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000000000
......CGGACAGGGTCAGCT--------GGACTTGGCTAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
.........................................................................................TTCCTTTTGCC-------TGTTACATACT--------A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000010000000
..............................................................................................TTTGCC-------TGTTACATACT--------ATTCATCGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000100000000
..........................................................................................................................................TAG-----CTTTGT--------TCTC------TACAAGTAACGGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000010000000
...............TCAGCT--------GGACTTGGCTATTGATCCTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000010000000
...............................................................................................TTGCC-------TGTTACATACT--------ATTCATCGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000100000000
...................................................................................................................................TCGAATCTAG-----CTTTGT--------TCTC------TACAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
...............................................................................................................ACATACT--------ATTCATCGAATCTAG-----CTTTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
.......................................ATTGATCCTGATCAAGAATATATA--TACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.9519000000071200000000
........................................................ATATATA--TACTT-TATATAGTC-GGAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.901800000009001080000
...........................................................TATA--TACTT-TATATAGTC-GGAAACGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.8016000000000000160000
......................................................GAATATATA--TACTT-TATATAGTC-GG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.701400000004280000000
.........................................................................TATAGTC-GGAAACGCTTCCTTTTGCC-------T.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2730.67200200000000000000
.................................TTGGCTATTGATCCTGATCAAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23110.64700000010213000000
.................................................................TACTT-TATATAGTC-GGAAACGCTTCCTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2940.50200000001100000000
.........................................................................TATAGTC-GGAAACGCTTCCTTTTGCC-------TG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.50100000010000000000
.........................................................TATATA--TACTT-TATATAGTC-GGAAACGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.45900000010000080000
....................................................................TT-TATATAGTC-GGAAACGCTTCCTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.43300000000201000000
.................................................................TACTT-TATATAGTC-GGAAACGCTTCCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.40800000026000000000
.................................................................TACTT-TATATAGTC-GGAAACGCTTCCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.40800000012050000000
............................................TCCTGATCAAGAATATATA--TACTT-..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.35700000002050000000
........................................................ATATATA--TACTT-TATATAGTC-GGAAACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.35700000000000070000
.......................................................................TATATAGTC-GGAAACGCTTCCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.35700000003040000000
......................................................GAATATATA--TACTT-TATATAGTC-GGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.35700000007000000000
.........................................................TATATA--TACTT-TATATAGTC-GGAAACGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.35700000011000050000
..............................................................................TC-GGAAACGCTTCCTTTTGCC-------TGTTACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2860.33200000020000000000
.................................TTGGCTATTGATCCTGATCAAGAATAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2790.33300000030000000000
.................................TTGGCTATTGATCCTGATCAAGAATA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2690.33300000010011000000
.........................................................TATATA--TACTT-TATATAGTC-GGAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.30600000000000051000
.................................................................TACTT-TATATAGTC-GGAAACGCTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.30600000051000000000
.................................................................TACTT-TATATAGTC-GGAAACGCTTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.30600000032100000000
.........................................................TATATA--TACTT-TATATAGTC-GGAAACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.30600000000000060000
.......................................................................TATATAGTC-GGAAACGCTTCCTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.29200000000002000000
.................................................................TACTT-TATATAGTC-GGAAACGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.25500000000230000000
.................................................................TACTT-TATATAGTC-GGAAACGCTTCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.25500000022000010000
....................................................................TT-TATATAGTC-GGAAACGCTTCCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.25500000000032000000
...........................................................TATA--TACTT-TATATAGTC-GGAAACGCTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.20400000000010030000
.......................................ATTGATCCTGATCAAGAATATATA--TACTT-..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.20400000004000000000
.........................................................TATATA--TACTT-TATATAGTC-GGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.20400000000000040000
.........................................................TATATA--TACTT-TATATAGTC-GGAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.20400000000000040000
..............................................................................TC-GGAAACGCTTCCTTTTGCC-------TGTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.17100000010000000000
.................................TTGGCTATTGATCCTGATCAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22120.17200000000101000000
.................................TTGGCTATTGATCCTGATCAAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23120.17200000011000000000
..................................TGGCTATTGATCCTGATCAAGAATA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25130.15200000000110000000
........................................................ATATATA--TACTT-TATATAGTC-GGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.15300000010100001000
.......................................ATTGATCCTGATCAAGAATATATA--T...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.15300000000030000000
...............................................................................................TTGCC-------TGTTACATACT--------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.15300000012000000000
..........................................................ATATA--TACTT-TATATAGTC-GGAAACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.15300000000010020000
.........................................................................TATAGTC-GGAAACGCTTCCTTTTGCC-------GA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2870.14100000000001000000
.................................TTGGCTATTGATCCTGATCAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21140.14201100000000000000
.........................................................................TATAGTC-GGAAACGCTTCCTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2280.13100000000001000000
..........................................................................................TCCTTTTGCC-------TGTTACATACT--------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21160.13200000010100000000
.................................TTGGCTATTGATCCTGATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20160.13200000000011000000
.....................................................AGAATATATA--TACTT-TATATAGTC-GGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.10200000001000010000
...................................................CAAGAATATATA--TACTT-TATATAGTC-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.10200000000002000000
..........................................................ATATA--TACTT-TATATAGTC-GGAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10200000010000010000
....................................GCTATTGATCCTGATCAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.10200000020000000000
........................................................ATATATA--TACTT-TATATAGTC-GGAAACGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.10200000010000010000
......................................................GAATATATA--TACTT-TATATAGTC-GGAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.10200000002000000000
......................................................GAATATATA--TACTT-TATATAGTC-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10200000000001001000
............................................TCCTGATCAAGAATATATA--TACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10200000002000000000
.................................................................TACTT-TATATAGTC-GGAAACGCTTCCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.10200000020000000000
.............................................................TA--TACTT-TATATAGTC-GGAAACGCTTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.10200000000100010000
.................................TTGGCTATTGATCCTGATCAAGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24100.10100000000100000000
.........................................TGATCCTGATCAAGAATATATA--TACTT-..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.10200000000020000000
...............................ACTTGGCTATTGATCCTGATCAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24100.10100000001000000000
........................................................................ATATAGTC-GGAAACGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.10200000002000000000
..................................TGGCTATTGATCCTGATCAAGAATAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26130.08100000010000000000
..................................TGGCTATTGATCCTGATCAAGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23140.07100000010000000000
..........................................................................................TCCTTTTGCC-------TGTTACATACT--------ATTCTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27140.07100000000000001000
..................................TGGCTATTGATCCTGATCAAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22150.07100000000100000000
..................................TGGCTATTGATCCTGATCAAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23170.06100000000001000000
.................................TTGGCTATTGATCCTGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18170.06100000000001000000
..........................................................................................TCCTTTTGCC-------TGTTACAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18180.06100000010000000000
...........................................................................................CCTTTTGCC-------TGTTACATACT--------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20180.06100000010000000000
...................................GGCTATTGATCCTGATCAAGAATA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100000010000000000
............................................................ATA--TACTT-TATATAGTC-GGAAACGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100010000000000000
............................................TCCTGATCAAGAATATATA--TACTT-TATA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05100000000010000000
.......................................................AATATATA--TACTT-TATATAGTC-GGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000001000000000
............................................TCCTGATCAAGAATATATA--T...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100000000010000000
..........................................................ATATA--TACTT-TATATAGTC-GGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100000010000000000
.................................................................TACTT-TATATAGTC-GGAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100000000010000000
........................................................ATATATA--TACTT-TATATAGTC-GG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100000000010000000
...........................................................TATA--TACTT-TATATAGTC-GGAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100000000001000000
............................................TCCTGATCAAGAATATATA--TACTT-TAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100000000010000000
..................................TGGCTATTGATCCTGATCAAGAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100000000001000000
.......................................................................TATATAGTC-GGAAACGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100000000100000000
...........................................................TATA--TACTT-TATATAGTC-GGAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100000010000000000
..........................................GATCCTGATCAAGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15200.05100000000001000000
..............................................................................................TTTGCC-------TGTTACATACT--------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.05100000010000000000
....................................................AAGAATATATA--TACTT-TATATAGTC-GGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05100000001000000000
..........................................................ATATA--TACTT-TATATAGTC-GGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100000000000001000
......................................TATTGATCCTGATCAAGAATAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100000000001000000
........................................................ATATATA--TACTT-TATATAGTC-GGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100100000000000000
.....................................................................T-TATATAGTC-GGAAACGCTTCCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100000001000000000
......................................................GAATATATA--TACTT-TATATAGTC-G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100000000000010000
...................................................................CTT-TATATAGTC-GGAAACGCTTCCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100000010000000000
..........................................................ATATA--TACTT-TATATAGTC-G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100000000001000000
............................................................ATA--TACTT-TATATAGTC-GGAAACGCTTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05100000000001000000
.............................................................TA--TACTT-TATATAGTC-GGAAACGCTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100000010000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TAATATTAAAAAAA--------------------AAA...................................................................................................................................................................17200.05100000010000000000
.............................................................TA--TACTT-TATATAGTC-GGAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100000000001000000
.............................................................TA--TACTT-TATATAGTC-GGAAACGCTTCCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................30200.05100000000100000000
...........................................................TATA--TACTT-TATATAGTC-GGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100000001000000000
..........................................GATCCTGATCAAGAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.05100000000001000000
.........................................................TATATA--TACTT-TATATAGTC-GG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100000010000000000
.......................................................................TATATAGTC-GGAAACGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.05100000001000000000
......................................................GAATATATA--TACTT-TATATAGTC-GGAAACGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................31200.05100000001000000000
.......................................................AATATATA--TACTT-TATATAGTC-GGAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05100000000100000000
.......................................................................TATATAGTC-GGAAACGCTTCCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100000000001000000
.......................................................AATATATA--TACTT-TATATAGTC-GGAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100000000100000000
droSec2
---AGACGGACATGGCTAGAT--------CGACTCGGCTATTGATCATCATCAAGAATATATA--TACTT-AAATTAGTC-TGAAACGCTTCCTTCTGCC-------TGTAATACACT--------TTTCAACGAATCTAGTATACCCTTTT--------ACTC------TACGAGTAACGGGTGTAGAAAAAGTT--AGATTTTAAATTGAAGTGAGAA-------------------------------------------------------------------------------------------------------------------CAAT------------------------------G--------------------------------------------------------------------------------------------------------------------------------------TCTTTATTTATGGAAATCCAATTAG-----CAACTGAACT---ACTTATGCTGCCC-CT-------------------------AATAAGCT----GCGAGTCTTTAGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................................................................TTTCAACGAATCTAGTATACCCTTTT--------AC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.4599000
......CGGACATGGCTAGAT--------CGACTCGGCTAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510010
.........ACATGGCTAGAT--------CGACTCGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510010
......CGGACATGGCTAGAT--------CGACTCGGCTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510010
..............................................................................................................................TTTCAACGAATCTAGTATACCCTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510001
.....ACGGACATGGCTAGAT--------CGACTCGGCTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0511000
droYak3
GACAGACGGACATGGCCAGAT--------CGACTCAGCTATTGATCCTGATCAAGAATATATA--TACTT-TATATGGTC-GGAAACGCTTCCTTCTGCC-------TGTTA----CT--------TTTCAACGAATCTAGTATACCCTTTT--------TCAC------TACGAGTAACGGGTATAAAAAT--TC---GAATTATTGCAGA---------------------------------------------------------------------------------------------------------------------------TTCT------------------------------G---------GT--------------TA------AATT-GTACTTAC------ATA-GGTACTTAA------------AATT--TTTC-------------------------------ACAT---GATCTG--------------------------------------------------------------------------------------------------------------TASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................T--------TCAC------TACGAGTAACGGGTATAAAAAT--...................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
..................................................................................GAAACGCTTCCTTCTGCC-------TGTTA----CT--------T......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26130.08101000000000
................................................................................................................................TCAACGAATCTAGTATACCCTTTT--------TC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................26140.07101000000000
GACAGACGGACATGGCCAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010000000
........................................................................ATATGGTC-GGAAACGCTTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100000010000
..........................................................................ATGGTC-GGAAACGCTTCCTTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
..............................................CTGATCAAGAATATATA--TACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05110000000000
.................................................................TACTT-TATATGGTC-GGAAACGCTTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000010000
droEre2
GACAGACGGACATGGC----------------------TATTGATCCTGATCAGGAATATATATGTGCTT-TATATGGTC-GGAAACGCCTTCTTCTGCC-------TGTTACGT--T--------TTTCAT-------------TCCT--------------C------CGCAA-----CGA----------------------------------------TTGTTTCAACTGAACACCGAAA--ACT------ATGACATGG---------------GTGTGGTGAAAA---------------GGTTCAAAGTTAAAACT-GAACATTATACAAT----------------------------------------------------------------------------------------------TCTATTGGATCTAAAATGTTT------------------------------------------------------------------------------------------G--G--------------------TGT----T------------------------------CTGGTGTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
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Generated: 05/17/2015 at 11:17 PM