ID:

dmo_868

 Coordinate:

scaffold_6482:2113692-2113842 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.2 -3.1 -3.0

Flybase annnotation

exon [dmoj_GLEANR_14767:3]; CDS [Dmoj\GI14304-cds]; intron [Dmoj\GI14304-in]

Repeatable elements

NameClassFamilyStrand
DNAREP1_DMRCHelitron-
mature
  1. scaffold_2971:1282-1302 -
  2. scaffold_6115:4376-4396 -
  3. scaffold_6271:42114-42134 -
  4. scaffold_6359:2534793-2534813 -
  5. scaffold_6425:192309-192329 -
  6. scaffold_6437:35430-35450 -
  7. scaffold_6473:3820146-3820166 -
  8. scaffold_6473:13518328-13518348 -
  9. scaffold_6482:961007-961027 -
  10. dmo_868  scaffold_6482:2113692-2113712 -
  11. scaffold_6496:1366895-1366915 -
  12. scaffold_6496:25895264-25895284 -
  13. scaffold_6496:26685549-26685569 -
  14. scaffold_6500:23634011-23634031 -
  15. scaffold_6500:27706701-27706721 -
  16. scaffold_6500:29835224-29835244 -
  17. scaffold_6540:1654135-1654155 -
  18. scaffold_6540:1658452-1658472 -
  19. scaffold_6540:14783975-14783995 -
  20. scaffold_6541:918595-918615 -
star
  1. scaffold_6286:17748-17767 -
  2. scaffold_6328:3742145-3742164 -
  3. scaffold_6442:106130-106149 -
  4. scaffold_6482:1472041-1472060 -
  5. dmo_868  scaffold_6482:2113737-2113756 -
  6. scaffold_6496:25948940-25948959 -
  7. scaffold_6498:669701-669720 -
  8. scaffold_6498:924711-924730 -
  9. scaffold_6498:1655077-1655096 -
  10. dmo_1412  scaffold_6498:2878636-2878655 -
  11. scaffold_6500:5900172-5900191 -
  12. scaffold_6500:6388941-6388960 -
  13. scaffold_6500:6953622-6953641 -
  14. scaffold_6500:25416353-25416372 -
  15. scaffold_6540:1654179-1654198 -
  16. scaffold_6540:2834893-2834912 -
  17. scaffold_6541:1690458-1690477 -
  18. scaffold_6654:193808-193827 -
  19. scaffold_6654:284764-284783 -
  20. scaffold_6680:22848072-22848091 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTGATCGTAGGAATGGTAGTTGTTGTCCTTATACTCTACCTAATGGAACGGTAAGCATATACATTTTTTGAAAACTTACTCGATGGGCTAGAAAGGGCTGACCTTTTTATAATAATGGTATAATGGTTTTGTGAAAAGTATGTAACAGGCAGAAGGAATCATCTCAGACCCCATAAAGTATATATATTCTTGATCAGGACGACGAGCTGAGTCGATATAGCCCTGTCCGTCTGTTCGTCCGTCCGTCCGTA
****************************************************************************************************************************************((((((((..........((..((......))..))........)))))))).............************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V056
head
 M060
embryo
 V049
head
 V110
male body
....................................................................................................................................................................................TATATATTCTTGATCAGGACG.................................................. 21 0 20 0.20 4 4 0 0 0 0
.TGGTCGGAGGAATGGTAGGT...................................................................................................................................................................................................................................... 20 3 8 0.13 1 0 1 0 0 0
..............................................................................CTAGATGGGCTAGGAAGGC.......................................................................................................................................................... 19 3 9 0.11 1 0 1 0 0 0
........................................................................................................................................AGTATGTAACAGGCAGAAGG............................................................................................... 20 0 20 0.10 2 2 0 0 0 0
.......................................................................................................................................................................................ATATTCTTGATCAGGACGACGAGC............................................ 24 0 20 0.10 2 2 0 0 0 0
................................................................................................................................TTGTGAAAAGTATGTAACAGG...................................................................................................... 21 0 20 0.10 2 2 0 0 0 0
.....................................................................GAAGACTTCCTCGATCGGC................................................................................................................................................................... 19 3 12 0.08 1 0 0 0 0 1
.........................................AATGGCACGGGAAGCATGT............................................................................................................................................................................................... 19 3 17 0.06 1 0 0 0 1 0
.........................................AATGGAACTGTAAGCATTCA.............................................................................................................................................................................................. 20 3 18 0.06 1 0 1 0 0 0
......................................................................................................................................AAAGTATGTAACAGGCAGAAGGA.............................................................................................. 23 0 20 0.05 1 1 0 0 0 0
................................................................................................................................TTGTGAAAAGTATGTAACAGGCA.................................................................................................... 23 0 20 0.05 1 1 0 0 0 0
.............................................................................ACTGGATGGGCTAGGAGGG........................................................................................................................................................... 19 3 20 0.05 1 0 0 0 1 0
..........................................................................................................................................TATGTAACAGGCAGAAGGAATCATC........................................................................................ 25 0 20 0.05 1 0 0 1 0 0
......................................................................................................................................AAAGTATGTAACAGGCAGAAGGAATC........................................................................................... 26 0 20 0.05 1 0 0 1 0 0
.......................................................................................................................................................GAAGGAATCGTTTCCGACCCCATAAA.......................................................................... 26 3 20 0.05 1 0 0 1 0 0

Anti-sense strand reads

GACTAGCATCCTTACCATCAACAACAGGAATATGAGATGGATTACCTTGCCATTCGTATATGTAAAAAACTTTTGAATGAGCTACCCGATCTTTCCCGACTGGAAAAATATTATTACCATATTACCAAAACACTTTTCATACATTGTCCGTCTTCCTTAGTAGAGTCTGGGGTATTTCATATATATAAGAACTAGTCCTGCTGCTCGACTCAGCTATATCGGGACAGGCAGACAAGCAGGCAGGCAGGCAT
**************************************************((((((((..........((..((......))..))........)))))))).............**************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body
.................................................................................................................................................................................................AGTCCTGCTGCTCGACTCAGCTATAT................................ 26 0 20 0.15 3 0 0 3
............................................................................................................................................................................................................................GGGACAGGCAGACAAGCAGGCAGG....... 24 0 12 0.08 1 0 0 1
.....................................................................................................................................................................................................................CTATATCGGGACAGGCAGACAAGCAG............ 26 0 12 0.08 1 1 0 0
...............................................................................................................................................................................................................................ACAGGCAGACAAGCAGGCAGGCA..... 23 0 15 0.07 1 0 0 1
...........................................................................................................................................................CTTAGTAGAGTCTGGGGTA............................................................................. 19 0 20 0.05 1 1 0 0
..................................................................................................................................................TCCGTCTTCCTTAGTAGAGT..................................................................................... 20 0 20 0.05 1 0 1 0
.....................CAACAGGAAGATTAAATGG................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 1
.....................................................................................................................................................................................................CTGCTGCTCGACTCAGCTATAT................................ 22 0 20 0.05 1 1 0 0
.............................................................................................................................................................TAGTAGAGTCTGGGGTATTTCATAT..................................................................... 25 0 20 0.05 1 1 0 0
........................................................................................................................................................TTCCTTAGTAGAGTCTGGGGTATTT.......................................................................... 25 0 20 0.05 1 1 0 0
.............................................................................................................................................................TAGTAGAGTCTGGGGTATTT.......................................................................... 20 0 20 0.05 1 1 0 0
................................................................................................................................................................................................................CTCAGCTATATCGGGACAGG....................... 20 0 20 0.05 1 0 1 0
...................................................................................................................................................................................................TCCTGCTGCTCGACTCAGCTAT.................................. 22 0 20 0.05 1 1 0 0
.............................................................................................................................................................................................................CGACTCAGCTATATCGGGACAGGCAGAC.................. 28 0 20 0.05 1 0 1 0
....................................................................................................................................................................................................CCTGCTGCTCGACTCAGCT.................................... 19 0 20 0.05 1 0 1 0
....................................................................................................................................................................................................CCTGCTGCTCGACTCAGCTATATCG.............................. 25 0 20 0.05 1 0 1 0
................................................................................................................................................................TAGAGGCTGGGATATTTCATATAT................................................................... 24 2 20 0.05 1 0 1 0
..............................................................................................................................................................TGTAGAGGCTGGGATATTTCATATAT................................................................... 26 3 20 0.05 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6482:2113642-2113892 - dmo_868 CTGAT----------CGTAGGAATGGT---AGTT--GTTGTC------------CTTATACTCTACC------------------TAA----TGG--AACGGT---AAGC----------------------A---------TATA-----------------CATTTTT-----------------------------------TGAAAAC-TT----A-------------------------------------------------CTCGATGG-------GCT--------------------------------AGAAAGG--G---CT--GA-CCTTTTT---ATAA-------------------------TAATGGTATAATGGTTTTG-TG-------AAAAGTATGTAACAGGCAGAAGGAATCATCTCAGACCCCATAAAG--------TATATATATTCTTGATCAGGACGACGAGCTGAGTCGATATAGCCCTGTCCGTCTGTTC-------GTCCGTCCGTCCGTA------
droVir3 scaffold_12729:6109-6369 + AAAAA----------TA-----TTAGTTC-CTTGCCTTTAT---------------------TTACA------------------TTT----TCG--AATGTT---ACGAATATATTTTCATTAAGATTAACC--------GAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAA-CCTTTTT---AAACCCTGAACCCATTGAAAATGGAAA-GAAAGGCCATATTGTATTTGTGT-AAAAGCAAATGTATGTAGCAGACAGAAGGAAGCATCTCCGACCCCATAAAA--------TATATATATTCTTAATCAGCATCAATAGCCGAGTCGATCTAGCCGTGTCCGTCTGCCA-------GTCCGTCCGTCCGTA--TGTA
droGri2 scaffold_15110:18661200-18661399 - CTGACG-----------TC-------------------------------------------------------------------------------ACGGT---AAG------------------------TAAAAGGCATAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCA-TTTTTTT---ATACCCTCAACCAA-------GTGGGTAAAAAGGGTATAATGGTTTTGTTC-------AAATGTATGTAACAGGCAGAAGGAATCATCTTCGACCCCATAAAA--------CATATATATTCTTGATCACGGTCAACAGTCGAGTCGATATAGCCATGTCCGTCTGTCC-------GTCCGTCCGTCTGTA------
droWil2 scf2_1100000004953:308339-308600 + TTGGT----------CACAATTATGAA---ATT-----------ACTTTTCCT-CACATCTACTAAC------------------CAA----TTG--AACAGT---TAAC----------------------A---------TAT-TACCATCTTTGTTTTTC---------------------------------------TT-TTTTAGATTTTC------------------------------------------------------------------------------------A------------------GAAG----TAAAGC-AAA-GTTTTTT---ATACCCT-----TG-------CA-----AAAAGCGTATATTAAGTTTGGTG-------AAAAGTGTGCAACGCATAGAAGGAAGCATCTCCGACCATATAAAG--------TATATATATTCTTGATCAGCACGACGAGACGAGTTCAAATAGCCATGTCCGTCCGTCC-------GTCC----ATCTGGA------
dp5 Unknown_group_114:10758-11007 + TTTGA-----------------TTGGT---CCGT--TTTGTA------------CTTATGCAC------------------------------------TGAT-GTCA-------------------------TAAAAGGCATAAA-----------------CATTTTTTAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGGCA-CATTTTT---ATACCCGATACTCA----AA-ATGAGT-ATTGGGGTATATGAGATTTGTGGTGAAAGTGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCCATAAAG--------TATATATATTCTTGATCAGCATCAATGGCCGAGTCGATTAAGCCCTGTCTGTCTGTCC-------GTCTGTCCGTCCGTC------
droPer2 scaffold_141:32342-32574 + TTAAT-----------GTAAAAATGTT---TTTT--A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGATATTTAAAG----------T----------------C------------------TGTTTAATAAT-----------------------------G--GGTGTAGCCA-CCTTTTT---ATACCCGATACTCA----AA-ATGAGT-ATTGGGGTATATTAGATTTGTGGTAAAAGTGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCCATAAAG--------TATATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCATGTCTGTCTGTCC-------GTCTGTCCGTCCGT-------
droAna3 scaffold_12928:703040-703309 - ATGGT----------GGGC---ATGAA---TTTT--GTTGTAAAATT-------TTCAAGTTCTAAT------------------AGA----TGGGCAATGGT---GGGC----------------------A---------TGAT-----------------TT-TTTT-----------------------------------TGTAAAATTTTCAAGTTCTAAGA--------------------------------------------GATAGGCAATGGTGG----------GC---------------------------------AT-----GATTTTT---ATACCCT-----TG-------CA-------GAGGGTATTATAATTTTGGTC-------AAAAGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAG--------TATATATATTCTTGATCAGGATCACCTCCTGAGTCGATATGAGCATGTCCGTCTGTCC-------GTCTGTCCGTCTGTC------
droBip1 scf7180000391788:13033-13293 + TGAACGAGGGATTT-----------TC---AATT--TTTGTG------------AAAACTCTCTTTT------------------TAA----------AGCAC---AAAA----------------------A---------C-------------------------------------------------------------------------------------------GAAAA----------TCTTATACCTTGAAAAGTAAATTTT-----------TT----------GT--T-----------------AA-AAAC-----GCCGTCATTTTTTTT---ATACCCT-----TG-------CA-------GAGGGTATTATAATTTTGGTC-------AAAAGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAG--------TATATATATTCTTGATCAGGATCACCTCCTGAGTTGATATGAGCATGTCCGTCTGTCC-------GTCTGTCTGTCTGTT----TC
droKik1 scf7180000302683:289817-290048 - GAATCGTCGAATTTG------A------C-AATA------------------------TA---TA---------------------------TGG--AAAATT---AAAG----------------------A---------TATA-----------------AATTCAA-----------------------------------AAGACGG-TA----T-------------------------------------------------CTCGAAGA-------TCT--------------------------------ATT-------------AAG-CTTTTTT---ATACCCT-----TG-------C---------AGGGTATTATAATTTCAGTC-------AGAAGTTTGCAACGCAGTGAAGGAGACCTTTCCGACCCTATAAAG--------TATATATATTCTTGATCAGCATCAACAGCCGAGTCGATCTAGCCATGTCCGTCTGTCC-------GTCTGTCCGTCTGTC------
droFic1 scf7180000454059:309949-310233 + TGAT-----------AATAAAAATGGG---AAA-----------ATTTATTTTCATTAAAATTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAATTTTAAAG----------TGGTATAGCATATAATTT------------------TATTTAATAATGGCATAGCAGAAAATTATAGTCTAGATAGCTGCGA-AAAATT-CCTTTTT---ATACCCT-----TG-------CAGAGC-AAAAGGGTATTATAATTTCAGTC-------AGAAGTTTGCAACGCAGTGAAGGAGACACCTCAGACCCCATAAAG--------TATATATATTCTTGATCAGCATCACGATCAGAATCCAAATCCGTCTGTACGTCTGTCC-------GTCTGTCCGTCTGTC------
droEle1 scf7180000491048:45663-45894 + TAGTT----------TTTTTAA------C-CATA--------------------------C-CTATG------------------TAA---------AACAATGA-CAGC----------------------A---------AACC-----------------TATTTTTTTC-----------------------------------GAAT-TT----ATTCTTGGC----------------------------------------------------------G--------------------------------ATAAA--------CT-----GGTTTTT---ATACCCT-----TG-------CA-------GAGGGTATTATAATTTCAGTC-------AGAAGTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCTATAAAG--------TATATATATTCTTGATCAGCATCACTAGTAGAGTCGATCTAGCCATGTCCGTCTGTCC-------GTCCGTCTGTCCGT-------
droRho1 scf7180000774753:2490-2740 + CTATT-----------TTAGTAATAGTTCGAGTC--AATGGA------------CTCTTAATCCACG------------------TAG----T-------GAC-G-AAGC----------------------G---------CACC-----------------CACTTTA-----------------------------------AGAAAAT-TG---------------------AAATTTAGTGTTT-----------------------------------------------------------------------------------TAGCTG-TATTTTT---ATACCTT-----TG-------CA-------GAGGGTATTATAATTTTGGTC-------AAAAGTGTGCAACGCAGTGAAAGAGACATCTCCGACCCTATAAAG--------TATATATATTCTTGATCAGGATCACCTCCTGAGTTGATATAGCCATGTCCGTCTGTCC-------GTCTGTCTGTTTCTA------
droBia1 scf7180000301872:2313-2575 + GAAGTG--------------------T---AGCT--TTTGTA------------CACACT---------------TCATTTTATATAA----T------------------------------------------------------------------------------GCAACATTTTTGGTAAATGTTAATACAAACAATTCAAATAA-TT----------T--------------------------------------------GTGATGG-------GCT--------------------------------AAATG--------T--ATA-TGTTTTT---ATACCCT-----TG-------CA-------GAGGGTATAATGATTTTAGTC-------AGAAGTTTGCAACGCAGTGAAGGAGATGTTTTCGACCCTATAAAG--------TATATATATTCTTGATCAGTGTCACAAGACGAGTCGATCTAGCCATGTCCGTCTGTCC-------GTACGTCTGTCTGTCCATTTC
droTak1 scf7180000415477:3723-3952 + GTCAT----------TA--------------------TTCTT------------CACCTACTCCACT------------------TAT----T-------GCG-T-CAGC----------------------A---------CC-------------------CCCTTTC-----------------------------------TGAAAAC-TT---------------------------AGCA-----------------------CTT-------------------------------------------------------------------CATGGGT---ATACCCGTTACTCG-------TAGAGT-AAAAGGGTATATTGTATTCGTGC-------AAAAGTATGTAACAGGGAGAAGGA-CCGTTTCCGACCCCATAAAG--------TATATATATTCTTGATCAGGGTCTTTAGCAGAGTCGATATAGCCATGTCCGTCTGTCC-------GTCCGTCTGTCCGTC------
droEug1 scf7180000409369:16823-17049 - TGTC--------------------------------------------------TTTTTAATCTTCTTAGTAAGTACGTTCAATTTAT----T------------------------------------------------------------------------------TCGACATCATCGTAGAA-------------------------------------------------------------------------------------TTCG-------GTT--------------------------------AGAAA--------CA-----AAACATT---ATACATA------------------AT-AAAAGGGTATATTAGATGCGTTG-------AAAAGTATGTAACAGGTAGAAGGGAGCATTTCAGACCCTATAAAG--------TATATATATTCTTGATCAGGATCAATAGCGAAGTCGATTGAGCCATGTCCATCTGTCC-------GTCCGTCTGTCCGTA------
dm3 chr2L:22195926-22196178 - TTCTC----------CATCGTAACGAA---AATC--GT---ACGGCTT-TTTGCATTATACGCTATC------------------TAAATTGAAG--AACGGC---CAAC----------------------A--------------------------------CTATC-----------------------------------CCAAGAC-TC----------A-----------------------------------------------ATGG-------TAT----------CC--A--------------------AAAG--AATGTCACTA-TTTTTTT---ATACCCGATA-----------------------------------CTAGTT-------GAAAATAAGTAACAGGCAGAAGAAATCGTTTCCGACCATATAAAGTTAACATGTACATATATTCTTCTTTAGGATCAATAGCCGAGTCGATCTGGCCATGTCCGTCTGTC---------TCCGTC--TCCGTA------
droSim2 4:226302-226524 + dsi_21999 TCGTG-----------GAAGTGGTAGT--------------------------------------------------------------------------------AGC----------------------C---------CAGG-----------------AAGTGTTTTG-----------------------------------AAGC-TT----------AATGATAATGTAAG----------TGCTATACTCTGAC----------------------------------------------------------------------------AATTTTT---ATAATCTTTACTAG-------TAGAGT-AAAAAGCTATACTAGATTCGGTG-------AAAATTATGTAAGAGGTAGAAGGAAT----------------------------CTATATAGTCGTGATCAGGATCAATAGCCGAGCCAATATGGCCATCTCCGTCAGATCTGGTCATCTCCATCCGTCCGTA------
droSec2 scaffold_11:2636820-2637035 - TTGTT----------AGTTAAAATGTT---GT-------------------------------TT---------------------TT----TGA--AATGAT---AAGC----------------------A---TAGGCATAAT-----------------CA-----------------------------------------------------------------------------------------------------------------------TTT--------------------------------AGAAA--------GA-----ACTAATT---ATACCCGTTAATCG-------TAGAGTAAATTGGGTATACAATATTCGTTG-------AAATGTCTGTAACAGGCAGAACGAAGCCTTTCCGACTTTATAAAG--------TATATATATTCTTGATCGGGATCAATAGCTGAGTCGATCTAGCCATGTCCGTTTATCC-------G------------TA------
droYak3 v2_chrUn_322:63489-63742 + ATAAT----------TGTATTTATTTA---ATA-----------ATTATTATT-TTTATAAAATATA------------------TTT----TTA--ATAGAT---AAAT----------------------A---------TAT-AAATATATTTATTT---------------------------------------------AATAGAA-TC----G-------------------------------------------------TGCATTGG-------ACT--------------------------------AAAGG--------C------------------ACCCGTTACTCG-------TAGAGT-AAAATGGTATACTAGATTCGTTG-------AAAAGTATGTAACAGGCAGAGGAAG--------GTCCATATAAAG--------TATATATATTCTTGATCAGGATCAATAGCCGTGTTGATATGGCCATGTCCGTCTGTTC-------GTCCGTCTGTCCGTC------
droEre2 scaffold_4690:7578067-7578264 + AGCTTGTGCACTTTT------A------C-AATG------------------------TG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTA-TGTGTTTAAAATACCTGTTACTTG-------TAGAGT-AAAAGGGTATACTAGATTCGTTG-------AAAAGTATGTAACAGGCAGAAGGAAACGTTTCCGACCATATAAAG--------TATATACATTCTTGATCAGGATCAAGA-CCGAGTCGATCTAGCCATGTCCGTCCGTTC-------GTCCGTCTGTCCGTA------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
CTGAT----------CGTAGGAATGGT---AGTT--GTTGTC------------CTTATACTCTACC------------------TAA----TGG--AACGGT---AAGC----------------------A---------TATA-----------------CATTTTT-----------------------------------TGAAAAC-TT----A-------------------------------------------------CTCGATGG-------GCT--------------------------------AGAAAGG--G---CT--GA-CCTTTTT---ATAA-------------------------TAATGGTATAATGGTTTTG-TG-------AAAAGTATGTAACAGGCAGAAGGAATCATCTCAGACCCCATAAAG--------TATATATATTCTTGATCAGGACGACGAGCTGAGTCGATATAGCCCTGTCCGTCTGTTC-------GTCCGTCCGTCCGTA------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATATTCTTGATCAGGACG...............................................................21200.204400000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AGTATGTAACAGGCAGAAGG....................................................................................................................20200.102200000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGGACGACGAGC.........................................................24200.102200000
..........................................................................................................................................................................................................................................................................................................................................................................................................TTG-TG-------AAAAGTATGTAACAGG...........................................................................................................................21200.102200000
........................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTATGTAACAGGCAGAAGGA...................................................................................................................23200.051100000
..........................................................................................................................................................................................................................................................................................................................................................................................................TTG-TG-------AAAAGTATGTAACAGGCA.........................................................................................................................23200.051100000
............................................................................................................................................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGAATCATC.............................................................................................................25200.051000010
........................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTATGTAACAGGCAGAAGGAATC................................................................................................................26200.051000010
droVir3
AAAAA----------TA-----TTAGTTC-CTTGCCTTTAT---------------------TTACA------------------TTT----TCG--AATGTT---ACGAATATATTTTCATTAAGATTAACC--------GAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAA-CCTTTTT---AAACCCTGAACCCATTGAAAATGGAAA-GAAAGGCCATATTGTATTTGTGT-AAAAGCAAATGTATGTAGCAGACAGAAGGAAGCATCTCCGACCCCATAAAA--------TATATATATTCTTAATCAGCATCAATAGCCGAGTCGATCTAGCCGTGTCCGTCTGCCA-------GTCCGTCCGTCCGTA--TGTASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................ATGTAGCAGACAGAAGGAAGCATCT............................................................................................................2511.001000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................TTGAAAATGGAAA-GAAAGGCCATATTG...........................................................................................................................................................2711.001000000000000000000000000100000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCATCAATAGCCGAGTCGATC...............................................24200.306600000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAAA--------TATATATATTCTTAATCAGCA.................................................................2740.251000000000000000000000000001000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAAGCATCTCCGACCCC....................................................................................................21200.255000000000000000000000000000050000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCATCAATAGCCGAGTCGATCTA.............................................26200.153000000000000000000000000000030000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAAGCATCTCCGACCCC....................................................................................................20200.102000000000000000000000000000000000000000000000000000000000000002
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTAATCAGCATCAATAG..........................................................23200.102000000000000000000000000001001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTCGATCTAGCCGTGTCCGTCTG...............................25160.061000000000000000000000000000000010000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATTCTTAATCAGCATCAATAGC.........................................................25200.051000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAAGGAAGCATCTCCGACCCCATAA................................................................................................28200.051000000000000000000000000100000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGGAAGCATCTCCGAC.......................................................................................................19200.051000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGAGTCGATCTAGCCGTGTC.....................................22200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCATCAATAGCCGAGTCGATCT..............................................25200.051000000000000000000000000000000000000001000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATTCTTAATCAGCATCAATAGCA........................................................26200.051000000000000000000000000000000100000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATTCTTAATCAGCATCAATAGCCGAG.....................................................29200.051000001000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................CCTGAACCCATTGAAAATGGA............................................................................................................................................................................21200.051000000000000000000000000000000000000000000000000000100000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTAATCAGCATCAATAGCCGAGT....................................................26200.051000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAAGCATCTCCGACCCCATAAAA--------......................................................................................27200.051000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAAGGAAGCATCTCCGACCCCAT..................................................................................................26200.051000000000000000000000000001000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAGCATCTCCGACCCC....................................................................................................18200.051000000000000000000000000000000000000000000000000000000000000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATCAGCATCAATAGCCGAG.....................................................21200.051000000000000000000000001000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTAATCAGCATCAATAGCCGAGTCG..................................................28200.051000000000000000000000000001000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCAATAGCCGAGTCGATCT..............................................22200.051000000000000000000000000000000010000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................TTTTT---AAACCCTGAACC.........................................................................................................................................................................................17200.051000000000000000000000000000000000000000000000010000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTAATCAGCATCAATAGCCG.......................................................23200.051000000000000000000000000010000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATTCTTAATCAGCATCAATAG..........................................................24200.051000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTCGATCTAGCCGTGTCCG...................................21200.051000000000000000000000000000000100000000000000000000000000000000
droGri2
CTGACG-----------TC-------------------------------------------------------------------------------ACGGT---AAG------------------------TAAAAGGCATAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCA-TTTTTTT---ATACCCTCAACCAA-------GTGGGTAAAAAGGGTATAATGGTTTTGTTC-------AAATGTATGTAACAGGCAGAAGGAATCATCTTCGACCCCATAAAA--------CATATATATTCTTGATCACGGTCAACAGTCGAGTCGATATAGCCATGTCCGTCTGTCC-------GTCCGTCCGTCTGTA------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
TTGGT----------CACAATTATGAA---ATT-----------ACTTTTCCT-CACATCTACTAAC------------------CAA----TTG--AACAGT---TAAC----------------------A---------TAT-TACCATCTTTGTTTTTC---------------------------------------TT-TTTTAGATTTTC------------------------------------------------------------------------------------A------------------GAAG----TAAAGC-AAA-GTTTTTT---ATACCCT-----TG-------CA-----AAAAGCGTATATTAAGTTTGGTG-------AAAAGTGTGCAACGCATAGAAGGAAGCATCTCCGACCATATAAAG--------TATATATATTCTTGATCAGCACGACGAGACGAGTTCAAATAGCCATGTCCGTCCGTCC-------GTCC----ATCTGGA------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................................................................................................................................TTC------------------------------------------------------------------------------------A------------------GAAG----TAAAGC-AAA-GTTTTTT---A....................................................................................................................................................................................................2526.0012010110
.....................................................................................................................................................................................................................TTTC------------------------------------------------------------------------------------A------------------GAAG----TAAAGC-AAA-GTTTTTT---.....................................................................................................................................................................................................2545.5022012190
.............................................................................................TG--AACAGT---TAAC----------------------A---------TAT-TACCATCTTTG.....................................................................................................................................................................................................................................................................................................................................................................................................27114.5550044060
..............................................................................................................................................................................................................TTTAGATTTTC------------------------------------------------------------------------------------A------------------GAAG----TAAAGC-AAA-GT.............................................................................................................................................................................................................2744.5018050130
.............................................................................................TG--AACAGT---TAAC----------------------A---------TAT-TACCATCTTTGT....................................................................................................................................................................................................................................................................................................................................................................................................28113.1835026090
....................................................T-CACATCTACTAAC------------------CAA----TTG--AACAGT---........................................................................................................................................................................................................................................................................................................................................................................................................................................................2632.67803050
...............................................................TAAC------------------CAA----TTG--AACAGT---TAAC----------------------A---------TAT-TACCA...........................................................................................................................................................................................................................................................................................................................................................................................................29102.5025025000
.....................................................................................................................................................................................................................TTTC------------------------------------------------------------------------------------A------------------GAAG----TAAAGC-AAA-GTTTTTT---A....................................................................................................................................................................................................2622.50501040
......................................................CACATCTACTAAC------------------CAA----TTG--AACAGT---........................................................................................................................................................................................................................................................................................................................................................................................................................................................2532.00603030
.....................................................................................................................................................................................................................................................................................................................................................................................................TAAGTTTGGTG-------AAAAGTGTGCAACGCA...........................................................................................................................2712.00201010
................................................................................................................................................................................................................TAGATTTTC------------------------------------------------------------------------------------A------------------GAAG----TAAAGC-AAA-GTTT...........................................................................................................................................................................................................2751.80901161
......................................................................................................................................................................................................................TTC------------------------------------------------------------------------------------A------------------GAAG----TAAAGC-AAA-GTTTTTT---.....................................................................................................................................................................................................2441.75701060
.....................................................................................................................................................................................................................TTTC------------------------------------------------------------------------------------A------------------GAAG----TAAAGC-AAA-GTTTTT.........................................................................................................................................................................................................2441.50602040
.....................TATGAA---ATT-----------ACTTTTCCT-CACATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2441.50606000
................................................................................................................................................................................................................TAGATTTTC------------------------------------------------------------------------------------A------------------GAAG----TAAAGC-AAA-GT.............................................................................................................................................................................................................2551.40701060
................................T-----------ACTTTTCCT-CACATCTACTAAC------------------CAA----T.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2731.33404000
....................................................T-CACATCTACTAAC------------------CAA----TTG--AACAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2531.33404000
..............................................................................................................................................................................................................TTTAGATTTTC------------------------------------------------------------------------------------A------------------GAAG----TAAAGC-AAA-GTTT...........................................................................................................................................................................................................2941.25504100
................................................................................................................................................................................................................TAGATTTTC------------------------------------------------------------------------------------A------------------GAAG----TAAAGC-AAA-GTT............................................................................................................................................................................................................2651.20601050
....................................................................................................................................................................................................................................................................................................................................................................................................TTAAGTTTGGTG-------AAAAGTGTGCAACGCA...........................................................................................................................2811.00100010
.........................................................................................................................................................................................................................................................................................................................................................................TG-------CA-----AAAAGCGTATATTAAGTTTGGTG-------...........................................................................................................................................2711.00101000
.....................TATGAA---ATT-----------ACTTTTCCT-CACATCTAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2741.00404000
.............................................................................................TG--AACAGT---TAAC----------------------A---------TAT-TACCATCTT.......................................................................................................................................................................................................................................................................................................................................................................................................25110.9110010000
.......................................................ACATCTACTAAC------------------CAA----TTG--AACAGT---........................................................................................................................................................................................................................................................................................................................................................................................................................................................2490.78703040
...........................................................................................................................................................................................................................................................................................................................................................................................................TGGTG-------AAAAGTGTGCAACGCATAGAA......................................................................................................................2630.67200200
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAATAGCCATGTCCGTCCGTCC-------G....................25200.6513000130
....T----------CACAATTATGAA---ATT-----------ACTTTTCCT-............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25100.60606000
...............................................................................................................................................................................................................TTAGATTTTC------------------------------------------------------------------------------------A------------------GAAG----TAAAGC-AAA-GTT............................................................................................................................................................................................................2750.60303000
..............................................................................................................................................................................................................TTTAGATTTTC------------------------------------------------------------------------------------A------------------GAAG----TAAAGC-AAA-GTT............................................................................................................................................................................................................2840.50202000
..................AATTATGAA---ATT-----------ACTTTTCCT-CACATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.50202000
.TGGT----------CACAATTATGAA---ATT-----------ACTTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.50202000
..............................................................................................................................................................................................................TTTAGATTTTC------------------------------------------------------------------------------------A------------------GAAG----TAAAGC-AAA-G..............................................................................................................................................................................................................2690.44404000
...............................................................TAAC------------------CAA----TTG--AACAGT---TAAC----------------------A---------TAT-TACC............................................................................................................................................................................................................................................................................................................................................................................................................28100.40404000
.................................................................................................................................................................................................................AGATTTTC------------------------------------------------------------------------------------A------------------GAAG----TAAAGC-AAA-GTTT...........................................................................................................................................................................................................2650.40200110
.................................................................................................................................................................................................................AGATTTTC------------------------------------------------------------------------------------A------------------GAAG----TAAAGC-AAA-GT.............................................................................................................................................................................................................2450.40202000
..............................................................................................................................................TAT-TACCATCTTTGTTTTTC---------------------------------------TT-TTT..................................................................................................................................................................................................................................................................................................................................................25110.36403010
................................T-----------ACTTTTCCT-CACATCTACTAAC------------------CAA----......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.33101000
................................................TTCCT-CACATCTACTAAC------------------CAA----TTG--AACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2830.33101000
..................................................CCT-CACATCTACTAAC------------------CAA----TTG--AACAGT---........................................................................................................................................................................................................................................................................................................................................................................................................................................................2830.33101000
...........................................................................................................................................................................................................................................................................................................................................................................................................TGGTG-------AAAAGTGTGCAACGCATAGAAG.....................................................................................................................2730.33100100
....................................................T-CACATCTACTAAC------------------CAA----TTG--AACAGT---TAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2930.33101000
..........................................................TCTACTAAC------------------CAA----TTG--AACAGT---........................................................................................................................................................................................................................................................................................................................................................................................................................................................21150.33500050
...............CACAATTATGAA---ATT-----------ACTTTTCCT-............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24100.30303000
................................................................AAC------------------CAA----TTG--AACAGT---TAAC----------------------A---------TAT-TACCA...........................................................................................................................................................................................................................................................................................................................................................................................................28100.30303000
...............................................................TAAC------------------CAA----TTG--AACAGT---TAAC----------------------A---------TAT-................................................................................................................................................................................................................................................................................................................................................................................................................24140.29404000
..........................................................................................................TAAC----------------------A---------TAT-TACCATCTTTGTTTTTC---------------------------------------TT-.....................................................................................................................................................................................................................................................................................................................................................27110.27303000
.......................................................................................................................................................................................................................TC------------------------------------------------------------------------------------A------------------GAAG----TAAAGC-AAA-GTTTTTT---.....................................................................................................................................................................................................2340.25100010
.................CAATTATGAA---ATT-----------ACTTTTCCT-CACATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2840.25101000
......................................................................................................................................................................................................................TTC------------------------------------------------------------------------------------A------------------GAAG----TAAAGC-AAA-GTTTTT.........................................................................................................................................................................................................2340.25100010
..GGT----------CACAATTATGAA---ATT-----------ACTTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.25101000
.................CAATTATGAA---ATT-----------ACTTTTCCT-CACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.25101000
.....................TATGAA---ATT-----------ACTTTTCCT-CA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.25101000
....................TTATGAA---ATT-----------ACTTTTCCT-CACATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.25101000
.TGGT----------CACAATTATGAA---ATT-----------ACTTTTCCT-............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2840.25101000
...............CACAATTATGAA---ATT-----------ACTTTTCCT-CACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2840.25101000
...................................................................................................................................................................................................................ATTTTC------------------------------------------------------------------------------------A------------------GAAG----TAAAGC-AAA-GTTTTTT---.....................................................................................................................................................................................................2740.25100010
..................AATTATGAA---ATT-----------ACTTTTCCT-CACAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.25101000
................ACAATTATGAA---ATT-----------ACTTTTCCT-CACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.25101000
....................................................................................................................................................................................................................TTTTC------------------------------------------------------------------------------------A------------------GAAG----TAAAGC-AAA-GTTTTTT---.....................................................................................................................................................................................................2640.25100010
.......................TGAA---ATT-----------ACTTTTCCT-CACATCTAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.25101000
..............................................................................................................................................................................................................TTTAGATTTTC------------------------------------------------------------------------------------A------------------GAAG----TAAAGC-...................................................................................................................................................................................................................2290.22201010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCAAATAGCCATGTCCG...................................21200.20404000
....................................................................................................................................................................................................................TTTTC------------------------------------------------------------------------------------A------------------GAAG----TAAAGC-AAA-GT.............................................................................................................................................................................................................2150.20100010
................................................................................................................................................................................................................TAGATTTTC------------------------------------------------------------------------------------A------------------GAAG----TAAAGC-AAA-GTTTT..........................................................................................................................................................................................................2850.20101000
..........................................................................................................................................................TTGTTTTTC---------------------------------------TT-TTTTAGATTTTC------------------------------------------------------------------------------------A------------------GAAG----..........................................................................................................................................................................................................................28100.20202000
................................................................AAC------------------CAA----TTG--AACAGT---TAAC----------------------A---------TAT-TACC............................................................................................................................................................................................................................................................................................................................................................................................................27100.20202000
...............................................................................................................................................................................................................TTAGATTTTC------------------------------------------------------------------------------------A------------------GAAG----TAAAGC-AAA-GT.............................................................................................................................................................................................................2650.20101000
.................................................................................................................................................................................................................AGATTTTC------------------------------------------------------------------------------------A------------------GAAG----TAAAGC-AAA-GTT............................................................................................................................................................................................................2550.20100010
..........................................................................................................TAAC----------------------A---------TAT-TACCATCTTTGTTTTTC---------------------------------------TT-T....................................................................................................................................................................................................................................................................................................................................................28110.18202000
..............................................................................................G--AACAGT---TAAC----------------------A---------TAT-TACCATCTTTG.....................................................................................................................................................................................................................................................................................................................................................................................................26110.18202000
.............................................................................................TG--AACAGT---TAAC----------------------A---------TAT-TACCATCTTTGTT...................................................................................................................................................................................................................................................................................................................................................................................................29110.18202000
............................................................................................TTG--AACAGT---TAAC----------------------A---------TAT-TACCATCTTTG.....................................................................................................................................................................................................................................................................................................................................................................................................28110.18202000
...................................................................................................CAGT---TAAC----------------------A---------TAT-TACCATCTTTG.....................................................................................................................................................................................................................................................................................................................................................................................................23120.17202000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAGACGAGTTCAAATAGCCATG.......................................25200.15303000
..........................................................TCTACTAAC------------------CAA----TTG--AACAGT---TAAC----------------------A---------....................................................................................................................................................................................................................................................................................................................................................................................................................26140.14202000
.........................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTG-------AAAAGTGTGCAACGC............................................................................................................................2270.14100010
.................................................................................................................................................................TC---------------------------------------TT-TTTTAGATTTTC------------------------------------------------------------------------------------A------------------GAAG----TAAAGC-...................................................................................................................................................................................................................2780.13101000
...............................................................................................................................................................TTTC---------------------------------------TT-TTTTAGATTTTC------------------------------------------------------------------------------------A------------------GAAG----TAAAGC-...................................................................................................................................................................................................................2980.13101000
.......................................................ACATCTACTAAC------------------CAA----TTG--AACAGC---........................................................................................................................................................................................................................................................................................................................................................................................................................................................2490.11101000
.............................................................................................................................................................................................................TTTTAGATTTTC------------------------------------------------------------------------------------A------------------GAAG----TAAAGC-...................................................................................................................................................................................................................2390.11100010
..............................................................................................................................................................................................................TTTAGATTTTC------------------------------------------------------------------------------------A------------------GAAG----TAAAGC-AAA-...............................................................................................................................................................................................................2590.11100010
.......................................................ACATCTACTAAC------------------CAA----TTG--AACAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2390.11101000
..............................................................................................................................................................................................................TTTAGATTTTC------------------------------------------------------------------------------------A------------------GAAG----TAAAGC-AA.................................................................................................................................................................................................................2490.11101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAAATAGCCATGTCCGTCCG...............................22200.10200011
..................................................................................................................................................................................................................GATTTTC------------------------------------------------------------------------------------A------------------GAAG----TAAAGC-A..................................................................................................................................................................................................................19100.10100010
.............................................................................................................................................................TTTTTC---------------------------------------TT-TTTTAGATTTTC------------------------------------------------------------------------------------A------------------GAAG----..........................................................................................................................................................................................................................25100.10101000
................................................................................................................................................................TTC---------------------------------------TT-TTTTAGATTTTC------------------------------------------------------------------------------------A------------------GAAG----TAAAG.....................................................................................................................................................................................................................27100.10101000
....T----------CACAATTATGAA---ATT-----------ACTTTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22100.10101000
.................................................................................................................................................................................................................AGATTTTC------------------------------------------------------------------------------------A------------------GAAG----TAAAGC-A..................................................................................................................................................................................................................20100.10100010
...............................................................................................................................................................................................................TTAGATTTTC------------------------------------------------------------------------------------A------------------GAAG----TAAAGC-...................................................................................................................................................................................................................21100.10100010
...............................................................TAAC------------------CAA----TTG--AACAGT---TAAC----------------------A---------TAT-TAC.............................................................................................................................................................................................................................................................................................................................................................................................................27100.10101000
.....................TATGAA---ATT-----------ACTTTTCCT-............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18100.10101000
..........................................................................................................TAAC----------------------A---------TAT-TACCATCTTTGTTTTTC---------------------------------------T.......................................................................................................................................................................................................................................................................................................................................................26110.09101000
.............................................................................................TG--AACAGT---TAAC----------------------A---------TAT-TACCATCT........................................................................................................................................................................................................................................................................................................................................................................................................24110.09101000
.............................................................................................TG--AACAGT---TAAC----------------------A---------TAT-TACCATCTTTGC....................................................................................................................................................................................................................................................................................................................................................................................................28110.09100010
.................................................................AC------------------CAA----TTG--AACAGT---TAAC----------------------A---------TAT-TACCA...........................................................................................................................................................................................................................................................................................................................................................................................................27110.09101000
......................................................................................AA----TTG--AACAGT---TAAC----------------------A---------TAT-TACCATC.........................................................................................................................................................................................................................................................................................................................................................................................................26110.09100010
..................................................................................................................................................TACCATCTTTGTTTTTC---------------------------------------TT-T....................................................................................................................................................................................................................................................................................................................................................20110.09101000
.............................................................................................TG--AACAGT---TAAC----------------------A---------TAT-TACCATCTTT......................................................................................................................................................................................................................................................................................................................................................................................................26110.09101000
.......................................................................................................................................................TCTTTGTTTTTC---------------------------------------TT-TTTTAGATTT...........................................................................................................................................................................................................................................................................................................................................24110.09101000
...............................................................................................................................................AT-TACCATCTTTGTTTTTC---------------------------------------TT-TTT..................................................................................................................................................................................................................................................................................................................................................24110.09101000
..................................................................................................................................................TACCATCTTTGTTTTTC---------------------------------------TT-TTTTAGAT.............................................................................................................................................................................................................................................................................................................................................27110.09101000
......................................................................................AA----TTG--AACAGT---TAAC----------------------A---------TAT-TACCATCTT.......................................................................................................................................................................................................................................................................................................................................................................................................28110.09101000
.............................................................................................TG--AACAGT---TAAC----------------------A---------TAT-TACC............................................................................................................................................................................................................................................................................................................................................................................................................20110.09101000
.....................................................................................CAA----TTG--AACAGT---TAAC----------------------A---------TAT-TACCA...........................................................................................................................................................................................................................................................................................................................................................................................................25110.09101000
..................................................................................................................................................TACCATCTTTGTTTTTC---------------------------------------TT-TTTTAGATT............................................................................................................................................................................................................................................................................................................................................28110.09101000
.....................................................................................CAA----TTG--AACAGT---TAAC----------------------A---------TAT-TACCATCT........................................................................................................................................................................................................................................................................................................................................................................................................28110.09101000
.......................................................................................A----TTG--AACAGT---TAAC----------------------A---------TAT-TACCA...........................................................................................................................................................................................................................................................................................................................................................................................................23110.09101000
..............................................................................................G--AACAGT---TAAC----------------------A---------TAT-TACCATCTT.......................................................................................................................................................................................................................................................................................................................................................................................................24110.09101000
............................................................................................TTG--AACAGT---TAAC----------------------A---------TAT-TACC............................................................................................................................................................................................................................................................................................................................................................................................................21110.09101000
.............................................................................................................C----------------------A---------TAT-TACCATCTTTGTTTTTC---------------------------------------TT-.....................................................................................................................................................................................................................................................................................................................................................24110.09101000
..........................................................................................................TAAC----------------------A---------TAT-TACCATCTTTGTTTTTC---------------------------------------........................................................................................................................................................................................................................................................................................................................................................25120.08101000
........................................................................................................................................................CTTTGTTTTTC---------------------------------------TT-TTTTAGATT............................................................................................................................................................................................................................................................................................................................................22120.08101000
...............................................................TAAC------------------CAA----TTG--AACAGT---TAAC----------------------A---------TAT-TACCC...........................................................................................................................................................................................................................................................................................................................................................................................................29120.08101000
..........................................................................................................................................................TTGTTTTTC---------------------------------------TT-TTTTAGATTTTC------------------------------------------------------------------------------------A------------------G.................................................................................................................................................................................................................................25130.08101000
..............................................................CTAAC------------------CAA----TTG--AACAGT---TAAC----------------------A---------TAT-................................................................................................................................................................................................................................................................................................................................................................................................................25140.07101000
............................................................TACTAAC------------------CAA----TTG--AACAGT---TAAC----------------------A---------TAT-................................................................................................................................................................................................................................................................................................................................................................................................................27140.07101000
............................................................TACTAAC------------------CAA----TTG--AACAGT---TAAC----------------------A---------TA..................................................................................................................................................................................................................................................................................................................................................................................................................26140.07101000
.............................................................ACTAAC------------------CAA----TTG--AACAGT---TAAC----------------------A---------TAT-................................................................................................................................................................................................................................................................................................................................................................................................................26140.07101000
...........................................................CTACTAAC------------------CAA----TTG--AACAGT---TAAC----------------------A---------....................................................................................................................................................................................................................................................................................................................................................................................................................25140.07101000
.........................................................................................................................................................TTTGTTTTTC---------------------------------------TT-TTTTAGATT............................................................................................................................................................................................................................................................................................................................................21140.07100010
............................................................TACTAAC------------------CAA----TTG--AACAGT---........................................................................................................................................................................................................................................................................................................................................................................................................................................................19150.07101000
...........................................................................................................................................................TGTTTTTC---------------------------------------TT-TTTTAGATT............................................................................................................................................................................................................................................................................................................................................19150.07100010
........................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTGTGCAACGCATAGAAGG....................................................................................................................22200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGTCCGTCC-------GTCC----ATCTG........21200.05100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................GCATAGAAGGAAGCATCTCCGAC.......................................................................................................23200.05100100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATAGCCATGTCCGTCCGT..............................21200.05100100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCCATGTCCGTCCGTCC-------GTCC----A............24200.05101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCATGTCCGTCCGTCC-------GTCC----AT...........24200.05100010
dp5
TTTGA-----------------TTGGT---CCGT--TTTGTA------------CTTATGCAC------------------------------------TGAT-GTCA-------------------------TAAAAGGCATAAA-----------------CATTTTTTAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGGCA-CATTTTT---ATACCCGATACTCA----AA-ATGAGT-ATTGGGGTATATGAGATTTGTGGTGAAAGTGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCCATAAAG--------TATATATATTCTTGATCAGCATCAATGGCCGAGTCGATTAAGCCCTGTCTGTCTGTCC-------GTCTGTCCGTCCGTC------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAGTGGATGTGTG..................................................................................................................................232027.8055600000118460770
.........................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAGTGGATGTGT...................................................................................................................................22205.75115000000011500
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAATCGTTTCCGACCCCATAA................................................................................................25205.10102010200000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATGGCCGAGT....................................................2363.502101810000020
.........................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAGTGGATGTG....................................................................................................................................21202.5050000028000220
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATGGCCGAG.....................................................2262.331401400000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTGAAAGTGGATGTG....................................................................................................................................20202.054104100000000
...............................CGT--TTTGTA------------CTTATGCAC------------------------------------TGAT-G.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020100000100
...............................CGT--TTTGTA------------CTTATGCAC------------------------------------TGAT-GTCA-------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020200000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATGGCCGA......................................................2162.001201200000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTGAAAGTGGATGTGTG..................................................................................................................................22201.803603600000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATGGCCGAGTCG..................................................2541.7570700000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATGGCCGAGTC...................................................2451.2060600000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAGTGGATGTGTGTA................................................................................................................................25201.102202000000020
....................................TTTGTA------------CTTATGCAC------------------------------------TGAT-GTCA-------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCAATGGCCGAGTCGATT...............................................2121.0020200000000
....................................TTTGTA------------CTTATGCAC------------------------------------TGAT-GTCA-------------------------TAA..........................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.................................T--TTTGTA------------CTTATGCAC------------------------------------TGAT-GTCA-------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000100
......................................................CTTATGCAC------------------------------------TGAT-GTCA-------------------------TAAAAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
........................................................TATGCAC------------------------------------TGAT-GTCA-------------------------TAAAAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
........................GGT---CCGT--TTTGTA------------CTTATGCAC------------------------------------TGAT-G.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCATCAATGGCCGAGTCGA.................................................2131.0030300000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAATCGTTTCCGACCCCATA.................................................................................................24200.751500140000100
.........................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAGTGGATGTGTGT.................................................................................................................................24200.751500000001410
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATGGCCGAGTCGA.................................................2630.6720200000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATCAATGGCCGAGTCGAT................................................2130.6720200000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGATCAGCATCAATGGCCG.......................................................2180.6350500000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAATCGTTTCCGACCCCA...................................................................................................21200.601201200000000
................................................................................................................................................................................................................................................................................................................................................................................................................TGAAAGTGGATGTGTGTAACG.............................................................................................................................21200.60120900000300
.........................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAGTGGATG......................................................................................................................................19200.501000000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCATCAATGGCCGAGTCG..................................................2140.5020200000000
........................................................................................................................................................................TTTAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGGCA-CATT...........................................................................................................................................................................................................22200.4590810000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAGTGGATGTGTGTAAC..............................................................................................................................27200.4590900000000
.........................................................................................................................................................................TTAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGGCA-CATT...........................................................................................................................................................................................................21200.4590800000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCATCAAT............................................................21200.4080800000000
..............................................................................................................................................................................................................................................................................................................................................................TACCCGATACTCA----AA-ATGAGT-ATTG.....................................................................................................................................................................25200.4080800000000
.................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGTGGATGTGTGTAACGT............................................................................................................................21200.3570700000000
........................................................................................................................................................................................................................................................................................................................................................................TCA----AA-ATGAGT-ATTGGGGT.................................................................................................................................................................19200.3570700000000
.....................................................................................................................................................................TTTTTTAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGGCA-CA.............................................................................................................................................................................................................23200.3570510000010
......................................................................................................................................................................................................................................................................................................................................................................................................AGATTTGTGGTGAAAGTGG.........................................................................................................................................19200.3570500000200
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCGATTAAGCCCTGTCTG...................................20200.3570601000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCATCAATGGCCGAGTCGA.................................................2230.3310000000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCAATGGCCGAGTCGAT................................................2030.3310100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAGTGGATGT.....................................................................................................................................20200.3060000000060
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATGGCCGAGTCGG.................................................26100.3030200000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTGTCC-------GTCTGTCCGTC..........20200.3060600000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGATTAAGCCCTGTCTGTC.................................21110.2730200001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGATCAGCATCAATGGCCGAGTCG..................................................2640.2510100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTGAAAGTGGATGTGTGTA................................................................................................................................24200.2550000000500
.......................................................................................................................................................................................................................................................TC-----------------------------------------------------------------------------------TTGGCA-CATTTTT---ATACCCGATAC..........................................................................................................................................................................................2640.2510000000010
............................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGAAAGTGGATGTGT...................................................................................................................................19200.2550400000100
........................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTGGTGAAAGTGGATGT.....................................................................................................................................21200.2550000005000
........................................................................................................................................................................TTTAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGGCA-CATTT..........................................................................................................................................................................................................23200.2550500000000
.........................................................................................................................................................................................................................................................................................................................................................T---ATACCCGATACTCA----AA-ATGAGT-ATTG.....................................................................................................................................................................27200.2550500000000
........................................................................................................................................................................................................................................................................................................................................................................TCA----AA-ATGAGT-ATTGGGGTATATGAGA.........................................................................................................................................................2740.2510100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGCCCTGTCTGTCTGTCC-------GTCTGTC..............2740.2510100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCATCAATGGCCGAGTCG..................................................2040.2510000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGGAATCGTTTCCGACCC.....................................................................................................21200.2040400000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCGATTAAGCCCTGTCTGT..................................21200.2040400000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGATCAGCATCAATGGCC........................................................20100.2020200000000
..........................................................................................................................................................................TAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGGCA-CATTTT.........................................................................................................................................................................................................22200.2040400000000
.......................................................................................................................................................................TTTTAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGGCA-CA.............................................................................................................................................................................................................21200.2040310000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAATCGTTTCCGACCCCAT..................................................................................................23200.2040040000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCATCAATGGCCG.......................................................2650.2010100000000
......................................................................................................................................................................TTTTTAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGGCA-CATTTTT---.....................................................................................................................................................................................................27200.2040000000400
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGCATCAATGGCCGAGT....................................................2160.1710100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCATCAATGGCCGAGTC...................................................1960.1710100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATCAGCATCAATGGCCGAG.....................................................2160.1710100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATCAGCATCAATGGCCGA......................................................2060.1710100000000
......................................................................................................................................................................TTTTTAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGGCA-CA.............................................................................................................................................................................................................22200.1530300000000
.....................................................................................................................................................................TTTTTTAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGGCA-...............................................................................................................................................................................................................21200.1530300000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TGTGGTGAAAGTGGATGTGTGTAACG.............................................................................................................................26200.1530000001200
..........................................................................................................................................................................TAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGGCA-CATTT..........................................................................................................................................................................................................21200.1530300000000
...................................................................................................................................................................CATTTTTTAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGGCA-CAT............................................................................................................................................................................................................26200.1530300000000
......................................................................................................................................................................TTTTTAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGGCA-CATT...........................................................................................................................................................................................................24200.1530300000000
..........................................................................................................................................................................TAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGGCA-CATTTTT---.....................................................................................................................................................................................................23200.1530010000200
..........................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTGAAAGTGGATGTGTGTAAC..............................................................................................................................26200.1530300000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATGGCCGAGTT...................................................24160.1320200000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGCATCAATGGCC........................................................2290.1110000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATGGCCG.......................................................2090.1110100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCATCAATGGCCGAGTCGT.................................................2290.1110100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAGCCCTGTCTGTCTGTCC-------G....................22100.1010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTGGTGAAAGTGG.........................................................................................................................................17200.1020000000101
........................................................................................................................................................................TTTAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGGCA-CATTTT.........................................................................................................................................................................................................24200.1020200000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTGTCTGTCC-------GTCTGTCCGTCC.........25200.1020000000110
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGCCCTGTCTGTCTGTCC-------GT...................22100.1010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TGTAACGTCCAGAAGGAATCGTT.............................................................................................................23200.1020200000000
.......................................................................................................................................................................................................................................................................................................................................................................CTCA----AA-ATGAGT-ATTGGGGTATAT.............................................................................................................................................................24200.1020000000200
........................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTGGTGAAAGTGGATGTGT...................................................................................................................................23200.1020200000000
...............................................................................................................................................................................................................................................................................................................................................................................................................GTGAAAGTGGATGTGTGTAAC..............................................................................................................................21200.1020200000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGCATCAATGGCC........................................................21100.1010100000000
...........................................................................................................................................................................AC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGGCA-CATTTT.........................................................................................................................................................................................................21200.1020200000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................GGAATCGTTTCCGACCCCAT..................................................................................................20200.1020200000000
.......................................................................................................................................................................TTTTAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGGCA-CATT...........................................................................................................................................................................................................23200.1020200000000
.......................................................................................................................................................................TTTTAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGGCA-C..............................................................................................................................................................................................................20200.1020200000000
.....................................................................................................................................................................................................................................................................................................................................................TTTTT---ATACCCGATACTCA----AA-ATGAG...........................................................................................................................................................................26200.1020200000000
.................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGTGGATGTGTGTAACG.............................................................................................................................20200.1020200000000
...................................................................................................................................................................CATTTTTTAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGG..................................................................................................................................................................................................................21200.1020000000200
...................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGGATGTGTGTAACG.............................................................................................................................18200.1020200000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................GTGTAACGTCCAGAAGGAAT.................................................................................................................20200.1020200000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTTCCGACCCCATAAAG--------TATA..................................................................................23200.1020200000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGACCCCATAAAG--------TATATATATT............................................................................25200.1020000000200
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGATTAAGCCCTGTCTGTC.................................20120.0810100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATCAATGGCCGAGTCGG.................................................20140.0710000000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGATCAGCATCAATGGCCGT......................................................22190.0510100000000
.................................................................................................................................................A-----------------CATTTTTTAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGGCA-C..............................................................................................................................................................................................................25200.0510100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAGAAGGAATCGTTTCCGA........................................................................................................21200.0510000000100
.....................................................................................................................................................................TTTTTTAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGGCA-CATTTT.........................................................................................................................................................................................................27200.0510100000000
......................................................................................................................................................................TTTTTAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGG..................................................................................................................................................................................................................18200.0510100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................TGGATGTGTGTAACGTCCAGA.......................................................................................................................21200.0510000001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GTAACGTCCAGAAGGAATCGT..............................................................................................................21200.0510010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TGTGGTGAAAGTGGATGTGTGTA................................................................................................................................23200.0510000000010
.........................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAGTGGATGTGA...................................................................................................................................22200.0510010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAGAAGGAATCGTTTCCGACCCC....................................................................................................25200.0510000100000
........................................................................................................................................................................TTTAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGGCA-...............................................................................................................................................................................................................18200.0510100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCCAGAAGGAATCGTTTC...........................................................................................................20200.0510000000010
........................................................................................................................................................................................................................................................................................................................................................................TCA----AA-ATGAGT-ATTGGGGTA................................................................................................................................................................20200.0510000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTGTCC-------GTCTGTCCGTCCG........22200.0510100000000
.....................................................................................................................................................................TTTTTTAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGG..................................................................................................................................................................................................................19200.0510000100000
.........................................................................................................................................................................TTAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGGCA-CAA............................................................................................................................................................................................................20200.0510100000000
.........................................................................................................................................................................TTAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGGCA-CATTTT.........................................................................................................................................................................................................23200.0510100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTCGATTAAGCCCTGTCTGT..................................22200.0510100000000
.................................................................................................................................................A-----------------CATTTTTTAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGGCA-CATT...........................................................................................................................................................................................................28200.0510100000000
.....................................................................................................................................................................TTTTTTAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGGCA-CATTT..........................................................................................................................................................................................................26200.0510100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAGTGGA........................................................................................................................................17200.0510000000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCTGTCTGTCC-------GTCTG................19200.0511000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTGGATGTGTGTAACG.............................................................................................................................19200.0510100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAGTGGAT.......................................................................................................................................18200.0510010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTGAAAGTGGATGTGTC..................................................................................................................................22200.0510000001000
......................................................................................................................................................................TTTTTAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGGCA-...............................................................................................................................................................................................................20200.0510100000000
...................................................................................................................................................................................................................................................................................................................................................CATTTTT---ATACCCGATACTCA----AA-ATG.............................................................................................................................................................................26200.0510100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGTCTGTCTGTCC-------GTCTG................20200.0510100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTCTGTCC-------GTCTGTCCGTC..........22200.0510000000010
.....................................................................................................................................................................TTTTTTAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGGCA-CATT...........................................................................................................................................................................................................25200.0510100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGATTAAGCCCTGTCTGT..................................20200.0510100000000
....................................................................................................................................................................ATTTTTTAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGGC.................................................................................................................................................................................................................21200.0510010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGATTAAGCCCTGTCTG...................................19200.0510100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG--------TATATATATTCTTGATCAG...................................................................21200.0510000000010
....................................................................................................................................................................ATTTTTTAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGG..................................................................................................................................................................................................................20200.0510100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTCC-------GTCTGTCCGTCCGT.......21200.0510000000010
....................................................................................................................................................................ATTTTTTAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGGCA-CA.............................................................................................................................................................................................................24200.0510010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TGTGGTGAAAGTGGATGTGTGTAA...............................................................................................................................24200.0510000000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAATCGTTTCCGACCCCATAAAG--------G.....................................................................................27200.0510100000000
...................................................................................................................................................................CATTTTTTAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGGCA-...............................................................................................................................................................................................................23200.0510100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TGGTGAAAGTGGATGTGTGTAAC..............................................................................................................................23200.0510100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTGGATGTGTGTAACGT............................................................................................................................20200.0510000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTGTCTGTCC-------GTCTGTCCGTC..........24200.0510000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAATCGTTTCCGACC......................................................................................................18200.0510100000000
........................................................................................................................................................................TTTAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGGCA-CATA...........................................................................................................................................................................................................22200.0510100000000
............................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGAAAGTGGATGTGTGTA................................................................................................................................22200.0510100000000
........................................................................................................................................................................TTTAC-----------------------------------AA----------------------------------TGCTC-----------------------------------------------------------------------------------TTGGCA-CA.............................................................................................................................................................................................................20200.0510010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTGTCC-------GTCTGTCCGTCCGT.......23200.0510000000100
...........................................................................................................................................................................................................................................................................................................................................................................................................TGTGGTGAAAGTGGATGTGTGT.................................................................................................................................22200.0510010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTCTGTCC-------GTCTGTCCGTCC.........23200.0510000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................TGGTGAAAGTGGATGTGTGTAACG.............................................................................................................................24200.0510100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TGTGGTGAAAGTGGATGTGT...................................................................................................................................20200.0510000001000
droPer2
TTAAT-----------GTAAAAATGTT---TTTT--A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGATATTTAAAG----------T----------------C------------------TGTTTAATAAT-----------------------------G--GGTGTAGCCA-CCTTTTT---ATACCCGATACTCA----AA-ATGAGT-ATTGGGGTATATTAGATTTGTGGTAAAAGTGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCCATAAAG--------TATATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCATGTCTGTCTGTCC-------GTCTGTCCGTCCGT-------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................................................................................................................................................................................................................................................GTAGCCA-CCTTTTT---ATACCCG..............................................................................................................................................................................................2113.003300000
...........................................................................................................................................................................................................................................................................................................................................GTAGCCA-CCTTTTT---ATACCC...............................................................................................................................................................................................2011.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGCATCAATAGCC........................................................21200.85170170000
......................................................................................................................................................................................................................................................................................................................................................................................................AGATTTGTGGTAAAAGTGGA........................................................................................................................................20200.60120000012
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATAGCCGAGTCG..................................................25200.459009000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCCATGTCTGTCTGTCC-------GT...................21200.204000004
.........................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGTGTAACGTCCAGA.......................................................................................................................18200.102000020
........................................................................................................................................................................................................................................................................................................................................................................................................................GATGTGTGTAACGTCCAG........................................................................................................................18200.051000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCCATGTCTGTCTGTCC-------.....................19200.051010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCC-------GTCTGTCCGTCCG........19200.051000001
droAna3
ATGGT----------GGGC---ATGAA---TTTT--GTTGTAAAATT-------TTCAAGTTCTAAT------------------AGA----TGGGCAATGGT---GGGC----------------------A---------TGAT-----------------TT-TTTT-----------------------------------TGTAAAATTTTCAAGTTCTAAGA--------------------------------------------GATAGGCAATGGTGG----------GC---------------------------------AT-----GATTTTT---ATACCCT-----TG-------CA-------GAGGGTATTATAATTTTGGTC-------AAAAGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAG--------TATATATATTCTTGATCAGGATCACCTCCTGAGTCGATATGAGCATGTCCGTCTGTCC-------GTCTGTCCGTCTGTC------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................................................................................................................................................................................................................................ATTATAATTTTGGTC-------AAAAGTGTGC.................................................................................................................................25200.60120120000
..............................................................................................................................................................................................................................................................................................................................................................................................................TC-------AAAAGTGTGCAACGCAGTGAAGGA...................................................................................................................26200.153000003
....................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGTGAAGGAGACATCT............................................................................................................18200.102000002
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCATGTCCGTCTGTCC-------GTCT.................23200.102000020
........................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGTC-------AAAAGTGTGCAACG.............................................................................................................................22200.102200000
...............................................................................................................................................................................................................TAAAATTTTCAAGTTCTAAGA--------------------------------------------G.................................................................................................................................................................................................................................................................................22120.081000010
.....................................................................................AGA----TGGGCAATGGT---GGGC----------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................18150.071000001
.....................................................................................AGA----TGGGCAATGGT---GGGC----------------------A---------TG..................................................................................................................................................................................................................................................................................................................................................................................................................21150.071000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCGATATGAGCATGTCCGTCTGT..............................25200.051001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCATGTCCGTCTGTCC-------.....................18200.051100000
................................................................................................................................................................................................................................................................................................................................................................................................TATTATAATTTTGGTC-------AAAAGTGTG..................................................................................................................................25200.051100000
droBip1
TGAACGAGGGATTT-----------TC---AATT--TTTGTG------------AAAACTCTCTTTT------------------TAA----------AGCAC---AAAA----------------------A---------C-------------------------------------------------------------------------------------------GAAAA----------TCTTATACCTTGAAAAGTAAATTTT-----------TT----------GT--T-----------------AA-AAAC-----GCCGTCATTTTTTTT---ATACCCT-----TG-------CA-------GAGGGTATTATAATTTTGGTC-------AAAAGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAG--------TATATATATTCTTGATCAGGATCACCTCCTGAGTTGATATGAGCATGTCCGTCTGTCC-------GTCTGTCTGTCTGTT----TCSizeHit CountTotal NormTotal
No Reads
droKik1
GAATCGTCGAATTTG------A------C-AATA------------------------TA---TA---------------------------TGG--AAAATT---AAAG----------------------A---------TATA-----------------AATTCAA-----------------------------------AAGACGG-TA----T-------------------------------------------------CTCGAAGA-------TCT--------------------------------ATT-------------AAG-CTTTTTT---ATACCCT-----TG-------C---------AGGGTATTATAATTTCAGTC-------AGAAGTTTGCAACGCAGTGAAGGAGACCTTTCCGACCCTATAAAG--------TATATATATTCTTGATCAGCATCAACAGCCGAGTCGATCTAGCCATGTCCGTCTGTCC-------GTCTGTCCGTCTGTC------SizeHit CountTotal NormTotal
No Reads
droFic1
TGAT-----------AATAAAAATGGG---AAA-----------ATTTATTTTCATTAAAATTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAATTTTAAAG----------TGGTATAGCATATAATTT------------------TATTTAATAATGGCATAGCAGAAAATTATAGTCTAGATAGCTGCGA-AAAATT-CCTTTTT---ATACCCT-----TG-------CAGAGC-AAAAGGGTATTATAATTTCAGTC-------AGAAGTTTGCAACGCAGTGAAGGAGACACCTCAGACCCCATAAAG--------TATATATATTCTTGATCAGCATCACGATCAGAATCCAAATCCGTCTGTACGTCTGTCC-------GTCTGTCCGTCTGTC------SizeHit CountTotal NormTotal
No Reads
droEle1
TAGTT----------TTTTTAA------C-CATA--------------------------C-CTATG------------------TAA---------AACAATGA-CAGC----------------------A---------AACC-----------------TATTTTTTTC-----------------------------------GAAT-TT----ATTCTTGGC----------------------------------------------------------G--------------------------------ATAAA--------CT-----GGTTTTT---ATACCCT-----TG-------CA-------GAGGGTATTATAATTTCAGTC-------AGAAGTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCTATAAAG--------TATATATATTCTTGATCAGCATCACTAGTAGAGTCGATCTAGCCATGTCCGTCTGTCC-------GTCCGTCTGTCCGT-------SizeHit CountTotal NormTotal
No Reads
droRho1
CTATT-----------TTAGTAATAGTTCGAGTC--AATGGA------------CTCTTAATCCACG------------------TAG----T-------GAC-G-AAGC----------------------G---------CACC-----------------CACTTTA-----------------------------------AGAAAAT-TG---------------------AAATTTAGTGTTT-----------------------------------------------------------------------------------TAGCTG-TATTTTT---ATACCTT-----TG-------CA-------GAGGGTATTATAATTTTGGTC-------AAAAGTGTGCAACGCAGTGAAAGAGACATCTCCGACCCTATAAAG--------TATATATATTCTTGATCAGGATCACCTCCTGAGTTGATATAGCCATGTCCGTCTGTCC-------GTCTGTCTGTTTCTA------SizeHit CountTotal NormTotal
No Reads
droBia1
GAAGTG--------------------T---AGCT--TTTGTA------------CACACT---------------TCATTTTATATAA----T------------------------------------------------------------------------------GCAACATTTTTGGTAAATGTTAATACAAACAATTCAAATAA-TT----------T--------------------------------------------GTGATGG-------GCT--------------------------------AAATG--------T--ATA-TGTTTTT---ATACCCT-----TG-------CA-------GAGGGTATAATGATTTTAGTC-------AGAAGTTTGCAACGCAGTGAAGGAGATGTTTTCGACCCTATAAAG--------TATATATATTCTTGATCAGTGTCACAAGACGAGTCGATCTAGCCATGTCCGTCTGTCC-------GTACGTCTGTCTGTCCATTTCSizeHit CountTotal NormTotal
No Reads
droTak1
GTCAT----------TA--------------------TTCTT------------CACCTACTCCACT------------------TAT----T-------GCG-T-CAGC----------------------A---------CC-------------------CCCTTTC-----------------------------------TGAAAAC-TT---------------------------AGCA-----------------------CTT-------------------------------------------------------------------CATGGGT---ATACCCGTTACTCG-------TAGAGT-AAAAGGGTATATTGTATTCGTGC-------AAAAGTATGTAACAGGGAGAAGGA-CCGTTTCCGACCCCATAAAG--------TATATATATTCTTGATCAGGGTCTTTAGCAGAGTCGATATAGCCATGTCCGTCTGTCC-------GTCCGTCTGTCCGTC------SizeHit CountTotal NormTotal
No Reads
droEug1
TGTC--------------------------------------------------TTTTTAATCTTCTTAGTAAGTACGTTCAATTTAT----T------------------------------------------------------------------------------TCGACATCATCGTAGAA-------------------------------------------------------------------------------------TTCG-------GTT--------------------------------AGAAA--------CA-----AAACATT---ATACATA------------------AT-AAAAGGGTATATTAGATGCGTTG-------AAAAGTATGTAACAGGTAGAAGGGAGCATTTCAGACCCTATAAAG--------TATATATATTCTTGATCAGGATCAATAGCGAAGTCGATTGAGCCATGTCCATCTGTCC-------GTCCGTCTGTCCGTA------SizeHit CountTotal NormTotal
No Reads
dm3
TTCTC----------CATCGTAACGAA---AATC--GT---ACGGCTT-TTTGCATTATACGCTATC------------------TAAATTGAAG--AACGGC---CAAC----------------------A--------------------------------CTATC-----------------------------------CCAAGAC-TC----------A-----------------------------------------------ATGG-------TAT----------CC--A--------------------AAAG--AATGTCACTA-TTTTTTT---ATACCCGATA-----------------------------------CTAGTT-------GAAAATAAGTAACAGGCAGAAGAAATCGTTTCCGACCATATAAAGTTAACATGTACATATATTCTTCTTTAGGATCAATAGCCGAGTCGATCTGGCCATGTCCGTCTGTC---------TCCGTC--TCCGTA------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCGAGTCGATCTGGCCATGTCCGT..................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCCGAGTCGATCTGGCCATGTCA....................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAGCCGAGTCGATCTG.............................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGAGTCGATCTGGCCATGTC.....................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
droSim2
TCGTG-----------GAAGTGGTAGT--------------------------------------------------------------------------------AGC----------------------C---------CAGG-----------------AAGTGTTTTG-----------------------------------AAGC-TT----------AATGATAATGTAAG----------TGCTATACTCTGAC----------------------------------------------------------------------------AATTTTT---ATAATCTTTACTAG-------TAGAGT-AAAAAGCTATACTAGATTCGGTG-------AAAATTATGTAAGAGGTAGAAGGAAT----------------------------CTATATAGTCGTGATCAGGATCAATAGCCGAGCCAATATGGCCATCTCCGTCAGATCTGGTCATCTCCATCCGTCCGTA------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATAGTCGTGATCAGGATCAATAGC.........................................................2717.00700000025000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTCGTGATCAGGATCAATAGCCGA......................................................2614.00400000004000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAAT----------------------------CTATATAGTCGTGATCAGGA.................................................................2612.00200000011000000000
................................................................................................................................................................................................................................................................................................................................................................................................TATACTAGATTCGGTG-------AAAATTATGTA................................................................................................................................2711.00100100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAAT----------------------------CTATATAGTCGTGATCAGGATC...............................................................2811.00100000001000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGTCAGATCTGGTCATCTCCATCCGTC..........2911.00100000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTCGTGATCAGGATCAATAGC.........................................................2311.00100000001000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAAGGAAT----------------------------CTATATAGTCGTGA.......................................................................2511.00100000001000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAGTCGTGATCAGGATCAATAGC.........................................................2511.00100000001000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGTCGTGATCAGGATCAATAGCCGA......................................................2711.00100000001000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAAGGAAT----------------------------CTATATAGTCGTGATC.....................................................................2611.00100000001000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATAGTCGTGATCAGGATCAATA...........................................................2511.00100000001000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATCAGGATCAATAGC.........................................................17200.15300000000003000000
................................................................................................................................................................................................................................................................................................................................................................................................TATACTAGATTCGGTG-------AAAATTATGTAAC..............................................................................................................................2980.13100000001000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGTGATCAGGATCGG.............................................................17200.05100000001000000000
droSec2
TTGTT----------AGTTAAAATGTT---GT-------------------------------TT---------------------TT----TGA--AATGAT---AAGC----------------------A---TAGGCATAAT-----------------CA-----------------------------------------------------------------------------------------------------------------------TTT--------------------------------AGAAA--------GA-----ACTAATT---ATACCCGTTAATCG-------TAGAGTAAATTGGGTATACAATATTCGTTG-------AAATGTCTGTAACAGGCAGAACGAAGCCTTTCCGACTTTATAAAG--------TATATATATTCTTGATCGGGATCAATAGCTGAGTCGATCTAGCCATGTCCGTTTATCC-------G------------TA------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATAGCTGAGTCGATCTAGCCATG.......................................2650.2010010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTCGATCTAGCCATGTCCGTTT................................2480.1311000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAATAGCTGAGTCGAT................................................19200.0510010
droYak3
ATAAT----------TGTATTTATTTA---ATA-----------ATTATTATT-TTTATAAAATATA------------------TTT----TTA--ATAGAT---AAAT----------------------A---------TAT-AAATATATTTATTT---------------------------------------------AATAGAA-TC----G-------------------------------------------------TGCATTGG-------ACT--------------------------------AAAGG--------C------------------ACCCGTTACTCG-------TAGAGT-AAAATGGTATACTAGATTCGTTG-------AAAAGTATGTAACAGGCAGAGGAAG--------GTCCATATAAAG--------TATATATATTCTTGATCAGGATCAATAGCCGTGTTGATATGGCCATGTCCGTCTGTTC-------GTCCGTCTGTCCGTC------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................TCGTTG-------AAAAGTATGTAACAGGCA.........................................................................................................................24200.15300300000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATTCTTGATCAGGATCAATAGCC........................................................27200.10202000000000
........................................................................................................................................................................................................................................................................................................................................................................TCG-------TAGAGT-AAAATGGTATACTAGATT.......................................................................................................................................................27200.10201100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGATCAGGATCAATAGCCG.......................................................21200.10220000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCATGTCCGTCTGTTC-------GTCCGTCT.............26100.10101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGGATCAATAGCCGT......................................................24140.07100100000000
........................................................................................................................................................................................................................................................................................................................................................................TCG-------TAGAGT-AAAATGGTATACTAGA.........................................................................................................................................................25200.05100000010000
....................................................................................................................................................................................................................................................................................................................................................................TTACTCG-------TAGAGT-AAAATGGTATA..............................................................................................................................................................24200.05101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGTCTGTTC-------GTCCGTCT.............20200.05100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATATTCTTGATCAGGATC...............................................................22200.05110000000000
............................................................................................................................................................................................................................................................................................................................................................................................ATGGTATACTAGATTCGTTG-------AAAAGT.....................................................................................................................................26200.05100100000000
droEre2
AGCTTGTGCACTTTT------A------C-AATG------------------------TG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTA-TGTGTTTAAAATACCTGTTACTTG-------TAGAGT-AAAAGGGTATACTAGATTCGTTG-------AAAAGTATGTAACAGGCAGAAGGAAACGTTTCCGACCATATAAAG--------TATATACATTCTTGATCAGGATCAAGA-CCGAGTCGATCTAGCCATGTCCGTCCGTTC-------GTCCGTCTGTCCGTA------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................TACTTG-------TAGAGT-AAAAGGGTATAC.............................................................................................................................................................24200.1532000100
.........................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTG-------AAAAGTATGTAACAGGCAGA.......................................................................................................................27200.1530000003
.........................................................................................................................................................................................................................................................................................................................................................................TG-------TAGAGT-AAAAGGGTATACTAGATTCG.....................................................................................................................................................2880.1311000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGGCAGAAGGAAACGTTT............................................................................................................21200.1020000200
.....................................................................................................................................................................................................................................................................................................................................................................TACTTG-------TAGAGT-AAAAGGGTATA..............................................................................................................................................................23200.1022000000
........................................................................................................................................................................................................................................................................................................................................................................TTG-------TAGAGT-AAAAGGGTATACTAGATT.......................................................................................................................................................27110.0911000000
....................................................................................................................................................................................................................................................................................................................................................................TTACTTG-------TAGAGT-AAAAGGGTATACTA...........................................................................................................................................................27130.0811000000
.....................................................................................................................................................................................................................................................................................................................................................................TACTTG-------TAGAGT-AAAAGGGTATACTA...........................................................................................................................................................26140.0711000000
..................................................................................................................................................................................................................................................................................................................................................................................TAGAGT-AAAAGGGTATACTAGATTCGT....................................................................................................................................................27200.0510000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGAAGGAAACGTTTCC..........................................................................................................19200.0510000100
................................................................................................................................................................................................................................................................................................................................................................................................................................TAACAGGCAGAAGGAAACGTTTCC..........................................................................................................24200.0510000010
....................................................................................................................................................................................................................................................................................................................................................................TTACTTG-------TAGAGT-AAAAGGGTATAC.............................................................................................................................................................25200.0511000000
...........................................................................................................................................................................................................................................................................................................................................................................................AAGGGTATACTAGATTCGTTG-------A..........................................................................................................................................22200.0510000100
...............................................................................................................................................................................................................................................................................................................................................................................................................G-------AAAAGTATGTAACAGGCAGA.......................................................................................................................21200.0510000100

Generated: 05/17/2015 at 11:16 PM