ID:

dmo_864

 Coordinate:

scaffold_6482:2021953-2022103 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-40.3 -40.3 -40.2

Flybase annnotation

exon [dmoj_GLEANR_14773:2]; CDS [Dmoj\GI14311-cds]; intron [Dmoj\GI14311-in]

Repeatable elements

NameClassFamilyStrand
Homo6DNAhAT-Pegasus+
mature
  1. dmo_864  scaffold_6482:2022010-2022033 -
  2. scaffold_6500:31852754-31852777 +
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CAGGGCCAAATCGACTCAGCTCGTCACCCTGATCAAGAATATATGTATATACTTTGTGGGGTCTGCCACGCCTCCTTCTGCCTGTTACATACATTTCAACAAAACCATTATACCCTGATTTCCCATTGAGAATGGGTTCAGGGTATAAAAAAATCGACCGAGTGAGTCATAAAACGCCCTTGATTGCTTTTGTGATTGCAGCTGAGAACGAGCCCTTAGGCTGCATGGAACTGATAGTGATAACGCTTTCA
**************************************************....(((((......))))).......((((..........(((((...........(((((((((((...((((((...)))))).)))))))))))...........)))))((((((((((.((........))))))))))))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 V056
head
.................................................................................................................................................................................................................GAGCCCTTAGGCTGCATGGAACTGATA............... 27 0 1 2.00 2 2 0 0
.......................................................................................................................................................................................................GTCTGAGAACGAGCCCTTAGGC.............................. 22 2 1 1.00 1 0 1 0
..................................................................................................................................................................................................................AGCCCTTAGGCTGCATGGAACTGAT................ 25 0 1 1.00 1 1 0 0
................................................................................................................................................................................................................CGAGCCCTTAGGCTGCATGGAACTG.................. 25 0 1 1.00 1 1 0 0
.............................................................................................................................................................................................................GAACGAGCCCTTAGGCTGCATGGA...................... 24 0 1 1.00 1 1 0 0
........................................................................................................................TCCCATTGAGAATGGGTTCAGGGT........................................................................................................... 24 0 2 0.50 1 1 0 0
............................................................................................................................ATTGAGAATGGGTTCAGGGTA.......................................................................................................... 21 0 2 0.50 1 1 0 0
.............................................................................................................................TTGAGAATGGGTTCAGGGTAT......................................................................................................... 21 0 2 0.50 1 0 1 0
..................................................................................................................CTGGTTTCCCATTGAGGATGG.................................................................................................................... 21 2 12 0.08 1 1 0 0
.........................................TATGTATATACTTTGTGGGGTCTG.......................................................................................................................................................................................... 24 0 14 0.07 1 1 0 0
......CAAATCGACTCAGCTCGTCACC............................................................................................................................................................................................................................... 22 0 20 0.05 1 0 0 1
............................................GTATATACTTTGTGGGGTCTG.......................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0

Anti-sense strand reads

GTCCCGGTTTAGCTGAGTCGAGCAGTGGGACTAGTTCTTATATACATATATGAAACACCCCAGACGGTGCGGAGGAAGACGGACAATGTATGTAAAGTTGTTTTGGTAATATGGGACTAAAGGGTAACTCTTACCCAAGTCCCATATTTTTTTAGCTGGCTCACTCAGTATTTTGCGGGAACTAACGAAAACACTAACGTCGACTCTTGCTCGGGAATCCGACGTACCTTGACTATCACTATTGCGAAAGT
**************************************************....(((((......))))).......((((..........(((((...........(((((((((((...((((((...)))))).)))))))))))...........)))))((((((((((.((........))))))))))))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V049
head
 M060
embryo
 V110
male body		 V041
embryo
 V056
head
........................................................................AGGAAGACGGACAATGTATGT.............................................................................................................................................................. 21 0 20 0.60 12 12 0 0 0 0 0
...................GAGCAGTGGGACTAGTTCTT.................................................................................................................................................................................................................... 20 0 20 0.30 6 6 0 0 0 0 0
..................CGAGCAGTGGGACTAGTTCTTA................................................................................................................................................................................................................... 22 0 20 0.25 5 5 0 0 0 0 0
...........................................................................................................................................................................................................GTCTTGCTCGTGAATCCG.............................. 18 2 5 0.20 1 0 1 0 0 0 0
........................................................ACCCCAGACGGTGCGGAGGA............................................................................................................................................................................... 20 0 20 0.20 4 4 0 0 0 0 0
......................................................................................................................................CCAAGTCCCATATTTTTTTAG................................................................................................ 21 0 6 0.17 1 0 0 1 0 0 0
.....................GCAGTGGGACTAGTTCTTATAT................................................................................................................................................................................................................ 22 0 20 0.15 3 3 0 0 0 0 0
......................................................................................................TTGGTAATATGGGACTAAAGGGTTACTC......................................................................................................................... 28 1 8 0.13 1 1 0 0 0 0 0
....................................CTTATATACATATATGAAACACCCCA............................................................................................................................................................................................. 26 0 10 0.10 1 1 0 0 0 0 0
.............................................................AGACGGTGCGGAGGAAGACG.......................................................................................................................................................................... 20 0 20 0.10 2 2 0 0 0 0 0
...............................................................................CGGACAATGTATGTAAAGTTGTTTT................................................................................................................................................... 25 0 20 0.05 1 0 0 0 0 1 0
.........................................................CCCCAGACGGTGCGGAGGAAGA............................................................................................................................................................................ 22 0 20 0.05 1 0 0 0 1 0 0
..........................................................................................................................................................GCTGACTCTCTCGGTATTTT............................................................................. 20 3 20 0.05 1 0 0 0 1 0 0
.....................................................................................................TTTGGTAATATGGGACTAAAGGGT.............................................................................................................................. 24 0 20 0.05 1 0 1 0 0 0 0
......................................................ACACCCCAGACGGTGCGGAGGA............................................................................................................................................................................... 22 0 20 0.05 1 0 0 0 0 1 0
GTCCCGGTTTAGCTGAGTCGAGCAGT................................................................................................................................................................................................................................. 26 0 20 0.05 1 1 0 0 0 0 0
.....................................................................................................TTTGGTAATATGGGACTAAAGGGTCATTC......................................................................................................................... 29 2 20 0.05 1 1 0 0 0 0 0
...............AGTCGAGCAGTGGGACTAGT........................................................................................................................................................................................................................ 20 0 20 0.05 1 0 0 0 0 0 1
.....................GCAGTGGGACTAGTTCTTATA................................................................................................................................................................................................................. 21 0 20 0.05 1 0 0 0 1 0 0
...........................................................................................................................................................CTGGCTCTCTCGGTATTTTC............................................................................ 20 3 20 0.05 1 1 0 0 0 0 0
.....................GCAGTGGGACTAGTTCTTAT.................................................................................................................................................................................................................. 20 0 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6482:2021903-2022153 - dmo_864 CAGGGCCAAATCGACTCAGCTCGTCACCCTGATCAAGAATATATGTATATACTTTGTGG-GGTCTGCCACGCCTCCT------TCTGCCTGTTACATACAT-------TTCAACAAAACCATTATACCCTGATTTCCCATTGA------GAATGGGTTCAGGGTATAAAAAAAT--------------CGACC--GAGTGA-------------------------GTCATAAAACG-------------------------------------CCCTTGATTGC------TTT------------------T-----GTGA----------------------------------------------TTGCAGCTGAGAACGAG----------------------------------------------------CCCTTAGGC-----TG--CATGG---AACTGATAGTGATAACGCTTT--------------------------CA
droVir3 scaffold_12954:1553077-1553306 - CATGGGCAAATTGACTCGGCTATTGGTGCTGATCAAGAGTATATA----TACTTTATGG-GGTCGGAGATGCTTCCT------TCTGCATGTTACATACATTTGGATTTCGCACAAATACAATATACCCTTATACCCCATT-T-------AATGGGTTCAGGGTATAAAAATAT--------------TAGGA----GA-----------------------------------GAGTTTTAGG-GTGC------------------------------------------C----------CGCTCGATTCATTCGTATGG----------------------------------------------TATTGAGTGGAAATATA----------------------------------------------------CCCTTGGCC-----TA--C--------------------------GT--------------------------GG
droGri2 scaffold_15203:10805352-10805600 - CATAACTATTTATGGTCGAGTGTTGATCCTGATCAATAATATATAT---TACTTTATGG-GGCCGGAGATGCTTCAT------GCTGCCAGTTACATACAT-------TTGCCCAAAAACATTATACCCTTTTTTTTA---ATAATTTACAATGCAATCAGGGTATAAAACCAG--------------CTCAAG--------------------------------------------------------------------------------------------------------------------GCCAGCGAATAATCAACTTA------------------------------------------AAGTAAGAACTAC----------------------------------------------------TCTTTAAGCCCGAGTG--CATGAATGACCTGAGAGTAGTCTTGTTGT---------------CATTTGTAG--CT
droWil2 scf2_1100000004909:4817740-4817945 + CATGGCTAGATCGACTCAGTTTTTGATCCTGATCAAGAATATATA----TACTTTGTGG-GGTCGGAGATGCTTCCT------TCTGCCTGTTACATACAT-------TTTGGCGACTTTAATATACCATTTCACCCT---AT----------GGGTGTATGGTATAACTAGTA--------------A---AT------------------AAA------------------------------ATC-------------------------TTTGTTGTTTAT------CGC------------------T-----ATGA---A-----------T---GAAATCTC-A-----------------GGAC------------------GCCTACAACAAATGA-----------------------------------------------------------------------------GT--------------------------GA
dp5 XL_group1a:581253-581477 - CAGGGCTCAATCGACTCGGCTATTGATGCTGATCAAGAATATATA----TACTTTATGG-GGTCGGAAACGATTCCT------TCTGGACGTTACACACATCCACTTTTACCACAAATCTAATATACCCCAATACTCA-TTTT----------GACTATCGGGTATAAAAAG---GC-----------A---G-------------------------------------------------------------------------------------------------------------------------TCACAGAGGGAACTGAAGGTTAAA---G--AAACGTCATTCAAATCCTAATGTATTTTATCTTAGAACAAG----------------------------------------------------CTCT----------------------------------------------------------------------T
droPer2 scaffold_3:3513125-3513366 - CATGGCTCAATCGACTCGGCTATTGATGCTGATCAAGAATATATA----TACTTTATGG-GGTCGGAAACGATTCCT------TCTGGACGTTACACACATCCACTTTTACCACAAATCTAATATACCCCAATACTCA-TTTT----------GAGTATCGGGTATAAAAAAAA--------------TGGAAG-CCGAG-----AGGTCGTGCCA--------------TGCGAAGCTTG-------------------------------------------------------------------------------------------------------------------------AAGGCCTTTTGT-----------CTGCT----------------G-------------CGGCGGTAAGCGGAC---ATCGTGAC-----GGCACGGGG-----CT--------------TTT--------------------------TT
droAna3 scaffold_13337:5819466-5819682 - CATGCTTATATCGACTCAGGAGGTGATCCTGATCAAGAATATATA----TACTTTATAG-GGTCGGAGATGTCTCCT------TCACTGCGTTGCACACTT-------TTGACCAAAATTATAATACCCTCT---------GC---------------AAGGGTATAAATAT---ATAAAATATTATA-A-----TAATAA-------------------------ATCATAAATAGTTTTAGA-CTG-------------------------TTTCTTGATCAG------CTA------------------A-----C----------------------------------------------------------------------------------------------------------------------CCCTCTAGT-----AA--CATGG-----CTAATAATA--------AT--------------------------AA
droBip1 scf7180000396574:132144-132360 - CATGCTCATATCAAATCAGGAGGTGATCCTGATCAAGAATATATA----TACTTTATAG-GGTCGAAGATGTCTCCT------TCACTGCGTTGCACACTT-------TTGGACAAAATTATAATACCCTCT---------GC---------------AAGGGTATAAAAAGAA--------------CAAGA----------------------------------------------------ATATCTGTTCTTGCGTGTGCCAGAAAAG-CCAGTGATTGC------GTTTGGGTATTTGG-----------------------------TCGA---G--AAGCT-------------------------------------------------------------------------------------------------------T--CGTGC---ATCC------------------------------------AGTAG--TG
droKik1 scf7180000302677:395436-395619 + CATGTCTAGAAAGATTCCCCCGTTGATGCTGATCAAGAATATATA----TACTTTATAG-GGTCGGAAACGTCTCCT------TCACTGTGTTGCAAACTT-------CTGACTGAAATTATAATACCCTGC--------------------------AAGGGTATAAAAAT---GG-----------A---G-----------------------------------------------------CA-------------------------TCCATTGGCAAC------TCT------------------T-----ATCA---A-----------CTGGGAAACCTC-A-----------------------------------------------------------G----------------------------------C-----TG--C-TGG---AAC---------------------------------------T--GATA
droFic1 scf7180000452121:1966-2179 - CAGACGGATTTCGATTCTGCTCGTGATGCTGATCAAGAATATATA----TACTTTATGG-GGTCTGAGGTGTCTCCT------TCACTGCGTTGCAAACTT-------CTGACTGAAATTATAATACCCTTTTGCTCT---GC----------A-----AGGGTATAAAAAT---GA-----------A---A---------------T---TCCGAGTTG-----AGCAG-------------A---------------------------------------------------------------------------------------------------------------------AACGACTTTTGA--------------AC----------------ATAAAAATGAACGTCCGA-----GTTGAGCA--------------------TAA---AACCGATAACG--------GT--------------------------AA
droEle1 scf7180000490432:6737-6960 - CATGGCTAGATCGACTCTACTAGTGATGCTGATCAAGAATATATA----TACTTTATAG-GGTCGGAAACGTCTCCT------TCACTGCGTTGCAAACTT-------CTGACTGAAATTATAATACCCTCTT---------C---------------AAGGGTATAAAAAGAA--------------CGAAAAGTAGTG-------G---CCCCA--------------G--------------ATGACTTCCTTGGGGGAAACCAGAA-------------A-AAGCATT--------------------T-----ACG-------------------------------------------------------------------------------------A-------------CGGAGGAAAGTTGATTA--------------------TTG---AAG--------AGAACGCGTT--------------------------GA
droRho1 scf7180000760597:750-983 - CATGGCTATATCGACTCGGCTAGTGACCCTGATCAAGAATATATA----TACTTTATAG-GGTCGGAAACGCTTCCT------TCTAGCTGTTACATACTT-------TTGCACGAATACAATATACCCTTTTACTCT---AC----------GAGTAACGGGTATAAATAT---AG-----------A---AT----A-GGCAGAGGT-------------------------------------CC-------------------------ATTTTTGATTGG------TTC------------------G-----ATGA---T-----------CT---GGAACTCTG-----------------GGTC------------------GTCTTCAGCTGCCGTG--------------------------------------------------------CAATTCAACGTGGTATTAT------------------------T--TGCA
droBia1 scf7180000301210:47268-47469 - CATGGCTAGATTGACTCGGCTAGTGATCCTCACCAAGAATGTATA----AACTTTATGG-GGTCGGAAATGTTTTCT------TTTACCTGTTACATACTT-------TCTGACGAATCTAGTATACCCTTTTACGCT---AC----------GAGCAACGGGTATAAAAAT---CG-----------A---G------------AAAT---GCA-----------------------------------------------------------CTCTTGATCGT------TT----------------------------------------------G------------------------------CTAA--------------AC----------------ACAAGCATAAA------------------TA--------------------TAG---TACTGATAC---------------------------------T--GACA
droTak1 scf7180000415812:192262-192481 + CATGGCTAGATCGACTCGGCTAGTGATCCTGATCAAGAATATATA----TAGTTTATAG-GGTCGGAAACGCTTCCT------TCTACCTGTTACATACTT-------TTGCACGAATCTAATATACCCTTTTACTCT---AC----------GAGTAACGGGTATAAAAACCT--------------TGGAC--AAAGA--------------------A-----T---TAAAAAGTTTAAAA-ATAT------------------------------------------T--------------------T-----ATGA----------------------------------------------TATTAGC----AATAAA----------------------------------------------------TACTTG--C-----TG--AATGT---AAATAAAAA---------------------------------T--GATA
droEug1 scf7180000409455:8998-9252 - CATGGCTCAATCGACTTCGCTATTGATCCTGATCAAGAATATATA----TACTTTATAG-GGTCGGAAACGCTTCCT------TCTATCTATTACATATTT-------TTCAACGAATCTAGTATACCCTTTTACTCT---AC----------AACTAACGGGTGTAATAAATAGTTAA---------C---A----A--------------TTCGCATTGGGAGCATCGTAAAAAG--------ATATCAGCTTTT-------CTAGAAA-----------------------------------------------------------------------------------------------------ATCCGAAAACCAT----------------------------------------------------CTTTTGAGCGTATGGG--TGGGAGTGGCCGGATAGTAGTACCACTAT--------------------------AA
dm3 chr3R:27895838-27896018 + CTGGGCTAGATCGACTTGGATCTTGATCCTGATCAAGAATATATA----TACTTTATAT-AGTCGGAAACGTTTCCT------TCTGTCTGTTACATAATT-------TTCAACGAAAATAGTATACCCTTATAATCT---AT----------GAGTAACGGGTATAAAAACAG--------------CAAGA----GTGA-------------------------TCAGCAAATAG-------------------------------------GCATTG--------------------------------------------------------------------------------------ACTTTTAT------------------------------------------------------------------------------------------------------------------------------------AT--TT
droSim2 2l:20905057-20905268 + CATGGCTAGATCGACTCGGCAACTGAACCTGATCAAAAATATATA----TACTTTATAT-GGTCAGAAATATATATATATAAGTATACCTGTTACATACTT-------TTCAACGAATCTAGTATACCCTTTTACTTA---AC----------GATTAACGGGTATAAAAAGTA--------------CT------GATAA-------------------------GTCAATAAAGG-------------------------------------AGATTGGTAAC------GGC------------------A-----ATGC---A-----------C---G-----------------------------AAGCAGTGAGCG--------------------------------------------------------------------------------ATCC------------------------------------ACGAG--GC
droSec2 scaffold_60:29116-29320 - CATGGTTAGATCAAATGGGCTATTGATCCTGATCAAGGATATACATATATACTTTATAT-AGTCGGGAACACTTCAT------TCTGCCTGTTACATACTT-------TTCAACGAATATAGTACACCCTTTCGCTCT---AC----------CAGTAACGGGTAAAAATAC---CA-----------GTAAC--CAGTA--------------------A-----CG---AAAAAATT-----------------------------------------ATTAC------AGA------------------C-----GCGA----------------------------------------------GGGCGGCTGGAAACAGG----------------------------------------------------CTC------------------------------------------TT--------------------------AG
droYak3 2L:19963029-19963256 - CATGGCCAAATCGACTCGGCTATTGATCCTGATCAAGAATATATA----TACTTTATAT-GGTCGGAAACGCTTCCT------TCTGCCTGTTACATACTT-------TTCAACGAATCTAGTATACCCTTTTACTCT---AC----------GAGTAACGGGTATAAATAT---AT-----------TTATT--CAGTT--------------------A-----AGTAG-------------T---------------------------------------------------------------------------------------------------------------------AGTAGT-TTTCC-----------CTAGT----------------GTAGACGGGAACGTTTCA-----GGT-----------GAG-----GGTGCATGG---CTCAGAT--TA--AACATTAT--------------------------TT
droEre2 scaffold_4770:907804-908039 - ----GCCAGATCGACTCGGCTGTTGATCCTGATCAAGAATATATA----TACTATATACTGGTCGGAAACGCTTCTT------TCTGCCTGTTACATAGTT-------TTCAACGAATCTAGTATACCCTTTTACCTT---AC----------GAC-------CATAAAAAT---TTGGTATATTATC-ATGG----AA-----------------------------------CAATTTTGCG-GGG------------GA-----------CTCATTGCCAA-AACCATTTT------------------G-----GTCA----------------------------------------------TGCCGAC------------------------------------------------------------TA--------------------TAA---CGCCTAC------------AAGCTGTAAAAAACTGTCACG-CT--TACA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
CAGGGCCAAATCGACTCAGCTCGTCACCCTGATCAAGAATATATGTATATACTTTGTGG-GGTCTGCCACGCCTCCT------TCTGCCTGTTACATACAT-------TTCAACAAAACCATTATACCCTGATTTCCCATTGA------GAATGGGTTCAGGGTATAAAAAAAT--------------CGACC--GAGTGA-------------------------GTCATAAAACG-------------------------------------CCCTTGATTGC------TTT------------------T-----GTGA----------------------------------------------TTGCAGCTGAGAACGAG----------------------------------------------------CCCTTAGGC-----TG--CATGG---AACTGATAGTGATAACGCTTT--------------------------CASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................GAG----------------------------------------------------CCCTTAGGC-----TG--CATGG---AACTGATA.........................................2712.002200000
...............................................................................................................................................................................................................................................................................................................................................................................................AG----------------------------------------------------CCCTTAGGC-----TG--CATGG---AACTGAT..........................................2511.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................CGAG----------------------------------------------------CCCTTAGGC-----TG--CATGG---AACTG............................................2511.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................GAACGAG----------------------------------------------------CCCTTAGGC-----TG--CATGG---A................................................2411.001100000
......................................................................................................................................TCCCATTGA------GAATGGGTTCAGGGT............................................................................................................................................................................................................................................................................................................................................................2420.501100000
..........................................................................................................................................ATTGA------GAATGGGTTCAGGGTA...........................................................................................................................................................................................................................................................................................................................................................2120.501100000
...........................................................................................................................................TTGA------GAATGGGTTCAGGGTAT..........................................................................................................................................................................................................................................................................................................................................................2120.501000001
.........................................TATGTATATACTTTGTGG-GGTCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................24140.071100000
......CAAATCGACTCAGCTCGTCACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000100
............................................GTATATACTTTGTGG-GGTCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
droVir3
CATGGGCAAATTGACTCGGCTATTGGTGCTGATCAAGAGTATATA----TACTTTATGG-GGTCGGAGATGCTTCCT------TCTGCATGTTACATACATTTGGATTTCGCACAAATACAATATACCCTTATACCCCATT-T-------AATGGGTTCAGGGTATAAAAATAT--------------TAGGA----GA-----------------------------------GAGTTTTAGG-GTGC------------------------------------------C----------CGCTCGATTCATTCGTATGG----------------------------------------------TATTGAGTGGAAATATA----------------------------------------------------CCCTTGGCC-----TA--C--------------------------GT--------------------------GGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................TACATTTGGATTTCGCACAAATACAA......................................................................................................................................................................................................................................................................................................................................................................................................26205.5511100000000000000000000000000001110000000000000000000000000000000000
................................................................................................TACATTTGGATTTCGCACAAATACAATA....................................................................................................................................................................................................................................................................................................................................................................................................28201.00200000000000000000000000000000001000180100000000000000000000000000
......................TTGGTGCTGATCAAGAGTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.753000003000000000000000000000000000000000000000000000000000000000
................................................................................................TACATTTGGATTTCGCACAAAT..........................................................................................................................................................................................................................................................................................................................................................................................................22200.5010000000000000000000000000002005000000030000000000000000000000000
.....................ATTGGTGCTGATCAAGAGTATAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.331000010000000000000000000000000000000000000000000000000000000000
.....................ATTGGTGCTGATCAAGAGTATATA----TAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2730.331000000000000000000000000000000010000000000000000000000000000000
...................CTATTGGTGCTGATCAAGAGTATATA----...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.331000000000000000000000000000000000000000100000000000000000000000
....................TATTGGTGCTGATCAAGAGTATATA----...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2530.331000000000000000000000000000000010000000000000000000000000000000
.............................TGATCAAGAGTATATA----TACTTTATGG-G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.204000000000000000000000000000001000030000000000000000000000000000
................................................................................................TACATTTGGATTTCGCACAAATACAAT.....................................................................................................................................................................................................................................................................................................................................................................................................27200.153000000000000000000000000000300000000000000000000000000000000000
................................................................................................TACATTTGGATTTCGCACAA............................................................................................................................................................................................................................................................................................................................................................................................................20200.153000030000000000000000000000000000000000000000000000000000000000
.............................TGATCAAGAGTATATA----TACTTTATG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.102000000000000000000000000000000000020000000000000000000000000000
................................................................................................TACATTTGGATTTCGCACAAA...........................................................................................................................................................................................................................................................................................................................................................................................................21200.102000000000000000000000000000000000000200000000000000000000000000
.................................CAAGAGTATATA----TACTTTATGG-G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.102000000000000000000000000000000000020000000000000000000000000000
.................................CAAGAGTATATA----TACTTTATGG-GGTCGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................28150.071000000000000000000000000000000000000000000000000000000000000010
..............................................................TCGGAGATGCTTCCT------TCTGCATGTTACA................................................................................................................................................................................................................................................................................................................................................................................................................................28160.061001000000000000000000000000000000000000000000000000000000000000
......................................GTATATA----TACTTTATGG-GGTCGGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................25170.061000000000000000000000000000000000000100000000000000000000000000
................................TCAAGAGTATATA----TACTTTATGG-GGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000010000000000000000000000000000000000000
..........................TGCTGATCAAGAGTATATA----TACTTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000000010000000000000000000000000000
..............................................................................................CATACATTTGGATTTCGCACAAATACAA......................................................................................................................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000000000000000100000000000000000000000000
.............................TGATCAAGAGTATATA----TACTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000010000000000000000000000000000000000
............................................................................T------TCTGCATGTTACATACATTTG........................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000100000000000000000000000000000000000
..............................................................TCGGAGATGCTTCCT------TCTGCATGTTC..................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000100000000000000000000000000000000000
................................TCAAGAGTATATA----TACTTTATGG-GGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000001000000000000000000000000000000000000
.............................TGATCAAGAGTATATA----TACTTTAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000010000000000000000000000000000
droGri2
CATAACTATTTATGGTCGAGTGTTGATCCTGATCAATAATATATAT---TACTTTATGG-GGCCGGAGATGCTTCAT------GCTGCCAGTTACATACAT-------TTGCCCAAAAACATTATACCCTTTTTTTTA---ATAATTTACAATGCAATCAGGGTATAAAACCAG--------------CTCAAG--------------------------------------------------------------------------------------------------------------------GCCAGCGAATAATCAACTTA------------------------------------------AAGTAAGAACTAC----------------------------------------------------TCTTTAAGCCCGAGTG--CATGAATGACCTGAGAGTAGTCTTGTTGT---------------CATTTGTAG--CTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
CATGGCTAGATCGACTCAGTTTTTGATCCTGATCAAGAATATATA----TACTTTGTGG-GGTCGGAGATGCTTCCT------TCTGCCTGTTACATACAT-------TTTGGCGACTTTAATATACCATTTCACCCT---AT----------GGGTGTATGGTATAACTAGTA--------------A---AT------------------AAA------------------------------ATC-------------------------TTTGTTGTTTAT------CGC------------------T-----ATGA---A-----------T---GAAATCTC-A-----------------GGAC------------------GCCTACAACAAATGA-----------------------------------------------------------------------------GT--------------------------GASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................TCCT------TCTGCCTGTTACATACA............................................................................................................................................................................................................................................................................................................................................................................................................................21200.15303000
.......................................TATATA----TACTTTGTGG-GGTCGGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.15300030
.....CTAGATCGACTCAGTTTTTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.10200002
.........................................................................TCCT------TCTGCCTGTTACATAC.............................................................................................................................................................................................................................................................................................................................................................................................................................20200.10202000
......................................ATATATA----TACTTTGTGG-GGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.10220000
.......................TGATCCTGATCAAGAATATATA----TACTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.10202000
...............TCAGTTTTTGATCCTGATCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
..................................................ACTTTGTGG-GGTCGGAGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05101000
.....................TTTGATCCTGATCAAGAATAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
..............................................................TCGGAGATGCTTCCT------TCTGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05110000
dp5
CAGGGCTCAATCGACTCGGCTATTGATGCTGATCAAGAATATATA----TACTTTATGG-GGTCGGAAACGATTCCT------TCTGGACGTTACACACATCCACTTTTACCACAAATCTAATATACCCCAATACTCA-TTTT----------GACTATCGGGTATAAAAAG---GC-----------A---G-------------------------------------------------------------------------------------------------------------------------TCACAGAGGGAACTGAAGGTTAAA---G--AAACGTCATTCAAATCCTAATGTATTTTATCTTAGAACAAG----------------------------------------------------CTCT----------------------------------------------------------------------TSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................................................TACCACAAATCTAATATACCCCAATA..........................................................................................................................................................................................................................................................................................................................................................................................26201.252502500000000
..................................................................................................................................AATACTCA-TTTT----------GACTATCGG..............................................................................................................................................................................................................................................................................................................................................................2141.2550300000002
................................TCAAGAATATATA----TACTTTATGG-GGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.701401400000000
...................................................................................................................................ATACTCA-TTTT----------GACTATCGGG.............................................................................................................................................................................................................................................................................................................................................................2140.5020200000000
..............................GATCAAGAATATATA----TACTTTATGG-G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.3570000000700
..GGGCTCAATCGACTCGGCTAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.3060600000000
......................................................................................................................................CTCA-TTTT----------GACTATCGGGTAT..........................................................................................................................................................................................................................................................................................................................................................2140.2510100000000
.....................................................................................................................................ACTCA-TTTT----------GACTATCGGGTA...........................................................................................................................................................................................................................................................................................................................................................2140.2510100000000
....................................................................................................................................TACTCA-TTTT----------GACTATCGGGT............................................................................................................................................................................................................................................................................................................................................................2140.2510100000000
..................................................ACTTTATGG-GGTCGGAAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.2550000000050
.......................................................................................................................................TCA-TTTT----------GACTATCGGGTA...........................................................................................................................................................................................................................................................................................................................................................1940.2510100000000
.....................................................TTATGG-GGTCGGAAACGATTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530000030000
.............................................................................................................................................................ATCGGGTATAAAAAG---GC-----------A---................................................................................................................................................................................................................................................................................................................................1880.1310100000000
...............................ATCAAGAATATATA----TACTTTATGG-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1020200000000
..............................GATCAAGAATATATA----TACTTTATGG-GG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.1020000000200
................................................................GGAAACGATTCCT------TCTGGACGTTA..................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1020200000000
...........................................................................CT------TCTGGACGTTACACACATCCAC.......................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510100000000
....................................................................................CTGGACGTTACACACATCCA........................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
.............................................................GTCGGAAACGATTCCT------TCTGGACGTTA..................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510100000000
..........................................ATA----TACTTTATGG-GGTCGGAAACGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000001000
.......CAATCGACTCGGCTATTGATGCTGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510100000000
......................................ATATATA----TACTTTATGG-GGTCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000010
...........................................TA----TACTTTATGG-GGTCGGAAACGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510100000000
..........................................ATA----TACTTTATGG-GGTCGGAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510010000000
droPer2
CATGGCTCAATCGACTCGGCTATTGATGCTGATCAAGAATATATA----TACTTTATGG-GGTCGGAAACGATTCCT------TCTGGACGTTACACACATCCACTTTTACCACAAATCTAATATACCCCAATACTCA-TTTT----------GAGTATCGGGTATAAAAAAAA--------------TGGAAG-CCGAG-----AGGTCGTGCCA--------------TGCGAAGCTTG-------------------------------------------------------------------------------------------------------------------------AAGGCCTTTTGT-----------CTGCT----------------G-------------CGGCGGTAAGCGGAC---ATCGTGAC-----GGCACGGGG-----CT--------------TTT--------------------------TTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................TTCCT------TCTGGACGTTACACACATCC.........................................................................................................................................................................................................................................................................................................................................................................................................................25200.204040000
..........................TGCTGATCAAGAATATATA----TA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.153030000
....................................................................................................................ATCTAATATACCCCAATACTCA-TT...................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
droAna3
CATGCTTATATCGACTCAGGAGGTGATCCTGATCAAGAATATATA----TACTTTATAG-GGTCGGAGATGTCTCCT------TCACTGCGTTGCACACTT-------TTGACCAAAATTATAATACCCTCT---------GC---------------AAGGGTATAAATAT---ATAAAATATTATA-A-----TAATAA-------------------------ATCATAAATAGTTTTAGA-CTG-------------------------TTTCTTGATCAG------CTA------------------A-----C----------------------------------------------------------------------------------------------------------------------CCCTCTAGT-----AA--CATGG-----CTAATAATA--------AT--------------------------AASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................GATGTCTCCT------TCACTGCGTTGCAC...............................................................................................................................................................................................................................................................................................................................................................................................................................24201.60320000032
.......................................................................................................................................................................................................................................................G-------------------------TTTCTTGATCAG------CTA------------------A-----C----------------------------------------------------------------------------------------------------------------------CCCTCT.....................................................................2411.001010000
droBip1
CATGCTCATATCAAATCAGGAGGTGATCCTGATCAAGAATATATA----TACTTTATAG-GGTCGAAGATGTCTCCT------TCACTGCGTTGCACACTT-------TTGGACAAAATTATAATACCCTCT---------GC---------------AAGGGTATAAAAAGAA--------------CAAGA----------------------------------------------------ATATCTGTTCTTGCGTGTGCCAGAAAAG-CCAGTGATTGC------GTTTGGGTATTTGG-----------------------------TCGA---G--AAGCT-------------------------------------------------------------------------------------------------------T--CGTGC---ATCC------------------------------------AGTAG--TGSizeHit CountTotal NormTotal
No Reads
droKik1
CATGTCTAGAAAGATTCCCCCGTTGATGCTGATCAAGAATATATA----TACTTTATAG-GGTCGGAAACGTCTCCT------TCACTGTGTTGCAAACTT-------CTGACTGAAATTATAATACCCTGC--------------------------AAGGGTATAAAAAT---GG-----------A---G-----------------------------------------------------CA-------------------------TCCATTGGCAAC------TCT------------------T-----ATCA---A-----------CTGGGAAACCTC-A-----------------------------------------------------------G----------------------------------C-----TG--C-TGG---AAC---------------------------------------T--GATASizeHit CountTotal NormTotal
No Reads
droFic1
CAGACGGATTTCGATTCTGCTCGTGATGCTGATCAAGAATATATA----TACTTTATGG-GGTCTGAGGTGTCTCCT------TCACTGCGTTGCAAACTT-------CTGACTGAAATTATAATACCCTTTTGCTCT---GC----------A-----AGGGTATAAAAAT---GA-----------A---A---------------T---TCCGAGTTG-----AGCAG-------------A---------------------------------------------------------------------------------------------------------------------AACGACTTTTGA--------------AC----------------ATAAAAATGAACGTCCGA-----GTTGAGCA--------------------TAA---AACCGATAACG--------GT--------------------------AASizeHit CountTotal NormTotal
No Reads
droEle1
CATGGCTAGATCGACTCTACTAGTGATGCTGATCAAGAATATATA----TACTTTATAG-GGTCGGAAACGTCTCCT------TCACTGCGTTGCAAACTT-------CTGACTGAAATTATAATACCCTCTT---------C---------------AAGGGTATAAAAAGAA--------------CGAAAAGTAGTG-------G---CCCCA--------------G--------------ATGACTTCCTTGGGGGAAACCAGAA-------------A-AAGCATT--------------------T-----ACG-------------------------------------------------------------------------------------A-------------CGGAGGAAAGTTGATTA--------------------TTG---AAG--------AGAACGCGTT--------------------------GASizeHit CountTotal NormTotal
No Reads
droRho1
CATGGCTATATCGACTCGGCTAGTGACCCTGATCAAGAATATATA----TACTTTATAG-GGTCGGAAACGCTTCCT------TCTAGCTGTTACATACTT-------TTGCACGAATACAATATACCCTTTTACTCT---AC----------GAGTAACGGGTATAAATAT---AG-----------A---AT----A-GGCAGAGGT-------------------------------------CC-------------------------ATTTTTGATTGG------TTC------------------G-----ATGA---T-----------CT---GGAACTCTG-----------------GGTC------------------GTCTTCAGCTGCCGTG--------------------------------------------------------CAATTCAACGTGGTATTAT------------------------T--TGCASizeHit CountTotal NormTotal
No Reads
droBia1
CATGGCTAGATTGACTCGGCTAGTGATCCTCACCAAGAATGTATA----AACTTTATGG-GGTCGGAAATGTTTTCT------TTTACCTGTTACATACTT-------TCTGACGAATCTAGTATACCCTTTTACGCT---AC----------GAGCAACGGGTATAAAAAT---CG-----------A---G------------AAAT---GCA-----------------------------------------------------------CTCTTGATCGT------TT----------------------------------------------G------------------------------CTAA--------------AC----------------ACAAGCATAAA------------------TA--------------------TAG---TACTGATAC---------------------------------T--GACASizeHit CountTotal NormTotal
No Reads
droTak1
CATGGCTAGATCGACTCGGCTAGTGATCCTGATCAAGAATATATA----TAGTTTATAG-GGTCGGAAACGCTTCCT------TCTACCTGTTACATACTT-------TTGCACGAATCTAATATACCCTTTTACTCT---AC----------GAGTAACGGGTATAAAAACCT--------------TGGAC--AAAGA--------------------A-----T---TAAAAAGTTTAAAA-ATAT------------------------------------------T--------------------T-----ATGA----------------------------------------------TATTAGC----AATAAA----------------------------------------------------TACTTG--C-----TG--AATGT---AAATAAAAA---------------------------------T--GATASizeHit CountTotal NormTotal
No Reads
droEug1
CATGGCTCAATCGACTTCGCTATTGATCCTGATCAAGAATATATA----TACTTTATAG-GGTCGGAAACGCTTCCT------TCTATCTATTACATATTT-------TTCAACGAATCTAGTATACCCTTTTACTCT---AC----------AACTAACGGGTGTAATAAATAGTTAA---------C---A----A--------------TTCGCATTGGGAGCATCGTAAAAAG--------ATATCAGCTTTT-------CTAGAAA-----------------------------------------------------------------------------------------------------ATCCGAAAACCAT----------------------------------------------------CTTTTGAGCGTATGGG--TGGGAGTGGCCGGATAGTAGTACCACTAT--------------------------AASizeHit CountTotal NormTotal
No Reads
dm3
CTGGGCTAGATCGACTTGGATCTTGATCCTGATCAAGAATATATA----TACTTTATAT-AGTCGGAAACGTTTCCT------TCTGTCTGTTACATAATT-------TTCAACGAAAATAGTATACCCTTATAATCT---AT----------GAGTAACGGGTATAAAAACAG--------------CAAGA----GTGA-------------------------TCAGCAAATAG-------------------------------------GCATTG--------------------------------------------------------------------------------------ACTTTTAT------------------------------------------------------------------------------------------------------------------------------------AT--TTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................TTATAT-AGTCGGAAACGTTTCCT------T............................................................................................................................................................................................................................................................................................................................................................................................................................................24378.002340000000000000000000001110000000000000020781020301101071000000000000000000000000000000000000000000000000000000000000000000000000000000000000024513261737218122170000000000000000000000000300000001001800101000000212000000000000110002060000000000000000000000000000000000000000000000000000000000007001000200020000120000000000000003750000000
.....................................................TTATAT-AGTCGGAAACGTTTCCT------.............................................................................................................................................................................................................................................................................................................................................................................................................................................23359.671790000000000000000000001400000000000000010540010101010500000000000000000000000000000000000000000000000000000000000000000000000000000002000000203202805192196182600000000000000000000000000000000020004000010000007000000000000020003110000000000000000000000000000000000000000000000000000000000006001002000000000430000000000000000121000000
.....................................................TTATAT-AGTCGGAAACGTTTCCT------TC...........................................................................................................................................................................................................................................................................................................................................................................................................................................25315.67470000000000000000000000100000000000000000010010001010100000000000000000000000000000000000000000000000000000000000000000000000000000002000000600004011400001500000000000000000000000000000000000001000000000001000000000000120001030000000000000000000000000000000000000000000000000000000000003000000100000000010000000000000000111000000
............................................................................................................................................................................................CAAGA----GTGA-------------------------TCAGCAAATAG-------------------------------------GCATT.........................................................................................................................................................................................................................................25314.33430000000000000000000000200000000000000000100010000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000007101010000001022660000000000101030000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000210000000
...................................................................................................................................................................TATAAAAACAG--------------CAAGA----GTGA-------------------------TCAGC.........................................................................................................................................................................................................................................................................................25314.00420000000000000000000000010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000063111430000300000000000000000000000000000000000000000000010000000500000000010000000000000000000000000000000000000000000000000000000000000000001000010000010000012000000000000001211000000
.......................................................................................................................................TCT---AT----------GAGTAACGGGTATAAAAACAG--------------C...................................................................................................................................................................................................................................................................................................................................27311.33340000000000000000000000000000000000000000020000001010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100100200000000000000000000000000000000001000000001000002223301000000000010010000000000000000000000000000000000000000000000000000000000000000000100000000310000000000000000010000000
..........................TCCTGATCAAGAATATATA----TACTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................242010.952190000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000001100003604000010038000000000000000000000000000000000001400000000000001000000000000000000061060000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................AACGGGTATAAAAACAG--------------CAAGA----GTGA-------------------------..............................................................................................................................................................................................................................................................................................26310.67320000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000003000201100000000000000000000000000000000000000000000000000000302203000000020002140000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000001000000000
.............................................................................................................................................................................G--------------CAAGA----GTGA-------------------------TCAGCAAATAG-------------------------------------GCATT.........................................................................................................................................................................................................................................26310.00300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100200000000000000000000000000000000000000002200000000001003204000000040000040000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000101000000
.TGGGCTAGATCGACTTGGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2039.00270000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005438700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TATAAAAACAG--------------CAAGA----GTGA-------------------------TCAGCA........................................................................................................................................................................................................................................................................................2638.00240000000000000000000000100000000000000000010000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001110600100100000000000000000000000000000000000000000000000001000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000000
..............................................................................................................................................................................................AGA----GTGA-------------------------TCAGCAAATAG-------------------------------------GCATTG--------------------------------------------------------------------------------------ACT...............................................................................................................................................2737.672300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000400000000000000000000000000000000000000000000000000010001011000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000
.......................................................................................................................................TCT---AT----------GAGTAACGGGTATAAAAACA...................................................................................................................................................................................................................................................................................................................................................2537.67230000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000001000000000000000100000000000000000000000000000101000000000000000000000000000000000000000000000030000000000000010205000000010000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000000000000310000000
.....................................................TTATAT-AGTCGGAAACGTTTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2237.00210000000000000000000000100000000000000010101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000001006100000200200000000000000000000000000000000000000000000000002000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TCCTGATCAAGAATATATA----TACTTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................25205.85117000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000025100000000000000000000000000000000000000001000000000000000000000000000208780000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................AAAAACAG--------------CAAGA----GTGA-------------------------TCAG..........................................................................................................................................................................................................................................................................................2135.67170000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000050100300000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000010000000
.TGGGCTAGATCGACTTGGATCTTGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2635.33160000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000001000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009
............................................................................................................................................................................................CAAGA----GTGA-------------------------TCAGCAAATAG-------------------------------------G.............................................................................................................................................................................................................................................2135.33160000000000000000000000000000000000000000110000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000040000000000011000000000000000000000000000001000000000000000000000000000000000000000210000000001000000000000000000000000000000000100000000
.........................................................................................................................................T---AT----------GAGTAACGGGTATAAAAACAG--------------C...................................................................................................................................................................................................................................................................................................................................2535.33160000000000000000000000000000000000000000000010000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000100000000000000000000000000000000000003000000000000040000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................TTATAT-AGTCGGAAACGTTTCCT------TCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2635.33160000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102012100000300000000000000000000000000000000000003000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................TAAAAACAG--------------CAAGA----GTGA-------------------------TCAGCAAA......................................................................................................................................................................................................................................................................................2635.00150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003800000000000000000000000000000000000000000000000001010100000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................................................ATAT-AGTCGGAAACGTTTCCT------.............................................................................................................................................................................................................................................................................................................................................................................................................................................2134.33130000000000000000000000000000000000000000000000100100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000200000000000000000000000000000000000000000110000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.TGGGCTAGATCGACTTGGATCTTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2534.00120000000000000000000000100000000000000010110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000200000000200000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................T-------TTCAACGAAAATAGTATACCCTTATAA.........................................................................................................................................................................................................................................................................................................................................................................................2833.67110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020011160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................CAG--------------CAAGA----GTGA-------------------------TCAGCAAATAG-------------------------------------G.............................................................................................................................................................................................................................................2433.67110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000004000000000000000000000000000000000000000000000000002002100000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................................................................................................................TAGTATACCCTTATAATCT---AT----------GAGT...................................................................................................................................................................................................................................................................................................................................................................2533.67110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100000000
....................................................................................................T-------TTCAACGAAAATAGTATACCCTTATA..........................................................................................................................................................................................................................................................................................................................................................................................2733.33100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................TCT---AT----------GAGTAACGGGTATAAAAACAG--------------....................................................................................................................................................................................................................................................................................................................................2633.33100000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000010000000
........................................................TAT-AGTCGGAAACGTTTCCT------T............................................................................................................................................................................................................................................................................................................................................................................................................................................2133.0090000000000000000000000000000000000000000000010000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000001000000200000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000010000000
.........................................................................................................................................................GAGTAACGGGTATAAAAACAG--------------CAAGA----G..........................................................................................................................................................................................................................................................................................................................2733.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000010000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.....................................................................................................................................................................TAAAAACAG--------------CAAGA----GTGA-------------------------TCAA..........................................................................................................................................................................................................................................................................................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TTTATAT-AGTCGGAAACGTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................ATAT-AGTCGGAAACGTTTCCT------T............................................................................................................................................................................................................................................................................................................................................................................................................................................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............................................................................................................................................................AACGGGTATAAAAACAG--------------CAAGA----GTG........................................................................................................................................................................................................................................................................................................................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................TACTTTATAT-AGTCGGAAACGTTTCCT------.............................................................................................................................................................................................................................................................................................................................................................................................................................................2730.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................AACAG--------------CAAGA----GTGA-------------------------TCAGCAAATAG-------------------------------------GCA...........................................................................................................................................................................................................................................2830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................AACGTTTCCT------TCTGTCTGTTACATA..............................................................................................................................................................................................................................................................................................................................................................................................................................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TAGATCGACTTGGATCTTGATCCTGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2730.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TCGACTTGGATCTTGATCCTGATCAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2730.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................TTATAATCT---AT----------GAGTAACGG..............................................................................................................................................................................................................................................................................................................................................................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................CAGCAAATAG-------------------------------------GCATTG--------------------------------------------------------------------------------------ACTTC.............................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................ACAG--------------CAAGA----GTGA-------------------------TCAGCAA.......................................................................................................................................................................................................................................................................................2030.3310000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................AAACAG--------------CAAGA----GTGA-------------------------TCAGCAAATAG-------------------------------------..............................................................................................................................................................................................................................................2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................TATAT-AGTCGGAAACGTTTCCT------TCTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................2730.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................CAAGA----GTGA-------------------------TCAGCAAATAG-------------------------------------GCATTG--------------------------------------------------------------------------------------A.................................................................................................................................................2730.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...................................................................AACGTTTCCT------TCTGTCTGTTACATAATT-------....................................................................................................................................................................................................................................................................................................................................................................................................................2830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................TACTTTATAT-AGTCGGAAACGTTTCCT------T............................................................................................................................................................................................................................................................................................................................................................................................................................................2830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................ACGTTTCCT------TCTGTCTGTTACA................................................................................................................................................................................................................................................................................................................................................................................................................................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................................................................................T-------TTCAACGAAAATAGTATACCCTTATT..........................................................................................................................................................................................................................................................................................................................................................................................2730.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................AACGAAAATAGTATACCCTTATAATC.......................................................................................................................................................................................................................................................................................................................................................................................2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................TATAATCT---AT----------GAGTAACGGGTATA.........................................................................................................................................................................................................................................................................................................................................................2430.3310000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CTGGGCTAGATCGACTTGGATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................GAGTAACGGGTATAAAAACAG--------------CAAGA----GT.........................................................................................................................................................................................................................................................................................................................2830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................GA-------------------------TCAGCAAATAG-------------------------------------GCATTG--------------------------------------------------------------------------------------ACTTT.............................................................................................................................................2430.3310000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CATGGCTAGATCGACTCGGCAACTGAACCTGATCAAAAATATATA----TACTTTATAT-GGTCAGAAATATATATATATAAGTATACCTGTTACATACTT-------TTCAACGAATCTAGTATACCCTTTTACTTA---AC----------GATTAACGGGTATAAAAAGTA--------------CT------GATAA-------------------------GTCAATAAAGG-------------------------------------AGATTGGTAAC------GGC------------------A-----ATGC---A-----------C---G-----------------------------AAGCAGTGAGCG--------------------------------------------------------------------------------ATCC------------------------------------ACGAG--GCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................ATA----TACTTTATAT-GGTCAGAAATATA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................26123.00230000001211000000000
..........................................ATA----TACTTTATAT-GGTCAGAAATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................24111.001100000060500000000
......................................................................................................................................................................................................TAA-------------------------GTCAATAAAGG-------------------------------------AGATTGGTAAC------GGC------------------........................................................................................................................................................................................................28110.001000000054100000000
....................................................................................................................................TACTTA---AC----------GATTAACGGGTATAAAAAG....................................................................................................................................................................................................................................................................................................................................................2714.00400000040000000000
............................................................................................................................................................................TA--------------CT------GATAA-------------------------GTCAATAAAGG-------------------------------------AGA...........................................................................................................................................................................................................................................2314.00400000010300000000
.............................................................................................................................................................................................T------GATAA-------------------------GTCAATAAAGG-------------------------------------AGATTGGT......................................................................................................................................................................................................................................2513.00300000011100000000
........GATCGACTCGGCAACTGAACCTGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.00300000000003000000
...............................................................................................................................................................................................................................................................................................................................TGC---A-----------C---G-----------------------------AAGCAGTGAGCG--------------------------------------------------------------------------------ATCC------------------------------------ACGAG--G.2813.00300000021000000000
...........................................................................................................................................................................GTA--------------CT------GATAA-------------------------GTCAATAAAGG-------------------------------------AGA...........................................................................................................................................................................................................................................2412.00200000020000000000
.............................................................................................................................................................................................T------GATAA-------------------------GTCAATAAAGG-------------------------------------AGATTGGTA.....................................................................................................................................................................................................................................2612.00200000010100000000
........................................................................................................................................TA---AC----------GATTAACGGGTATAAAAAGTA--------------....................................................................................................................................................................................................................................................................................................................................2512.00200000002000000000
.....CTAGATCGACTCGGCAACTGAACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200000011000000000
........................................................................................................................................................................................................A-------------------------GTCAATAAAGG-------------------------------------AGATTGGTAAC------GGC------------------........................................................................................................................................................................................................2612.00200000020000000000
............................................................................................................................................................................TA--------------CT------GATAA-------------------------GTCAATAAAGG-------------------------------------AGAT..........................................................................................................................................................................................................................................2412.00200000002000000000
...................................................................................................................................................................................................................................TCAATAAAGG-------------------------------------AGATTGGTAAC------GGC------------------........................................................................................................................................................................................................2412.00200000010100000000
........................................ATATA----TACTTTATAT-GGTCAGAAATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000002000000000
....................................................................................................T-------TTCAACGAATCTAGTATACCCTTT............................................................................................................................................................................................................................................................................................................................................................................................25201.7535000000310040000000
............................................................................................................................................................................TA--------------CT------GATAA-------------------------GTCAATAAAGG-------------------------------------AGATTGGT......................................................................................................................................................................................................................................2811.00100000001000000000
....................................................................................................................................................................................................................................................................................................................................................................................AGCAGTGAGCG--------------------------------------------------------------------------------ATCC------------------------------------ACGA.....1911.00100000000100000000
.....CTAGATCGACTCGGCAACTGAACCTGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
......TAGATCGACTCGGCAACTGAACCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
........................................................................................................................................................................................................................................................................................................................A-----ATGC---A-----------C---G-----------------------------AAGCAGTGAGCG--------------------------------------------------------------------------------ATCC------------------------------------ACGA.....2811.00100000010000000000
.....................................................................................................................................ACTTA---AC----------GATTAACGGGTATAAAAAG....................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
.....................................................................................................................................................................................................................................................................................TTGGTAAC------GGC------------------A-----ATGC---A-----------C---G-----------------------------A............................................................................................................................................2011.00100000010000000000
.......................................................................................................................................................................AAAAGTA--------------CT------GATAA-------------------------GTCAATAAAGG-------------------------------------AGA...........................................................................................................................................................................................................................................2811.00100000001000000000
..........................................ATA----TACTTTATAT-GGTCAGAAATATAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000010000000
........................................................................................................................................................................................................................................................................................................................A-----ATGC---A-----------C---G-----------------------------AAGCAGTGAGCG--------------------------------------------------------------------------------ATCC------------------------------------ACGAA--..2911.00100000010000000000
........................................................TAT-GGTCAGAAATATATATATATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000001000000000
.....................................................................................................................................................................................................................................AATAAAGG-------------------------------------AGATTGGTAAC------GGC------------------A-----ATGC---A-----------...............................................................................................................................................................................2811.00100000000010000000
..............................................................................................................................................................................................................................................................................................................................ATGC---A-----------C---G-----------------------------AAGCAGTGAGCG--------------------------------------------------------------------------------ATCC------------------------------------ACG......2611.00100000001000000000
.................GGCAACTGAACCTGATCAAAAATAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
................CGGCAACTGAACCTGATCAAAAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000001000000000
.ATGGCTAGATCGACTCGGCAACTGAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
..........................................................T-GGTCAGAAATATATATATATAAGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
.........................................TATA----TACTTTATAT-GGTCAGAAATATA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000100000000
.......................................................................................................................................TTA---AC----------GATTAACGGGTATAAAAAGT...................................................................................................................................................................................................................................................................................................................................................2511.00100000000100000000
..........................................ATA----TACTTTATAT-GGTCAGAAATAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
..........................................ATA----TACTTTATAT-GGTCAGAAATATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
......TAGATCGACTCGGCAACTGAACCTGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000100000000
......................................ATATATA----TACTTTATAT-GGTCAGAAATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
........................................................................................................................................................................................................................................................................................................................A-----ATGC---A-----------C---G-----------------------------AAGCAGTGAGCG--------------------------------------------------------------------------------ATCC------------------------------------ACG......2711.00100000010000000000
..........TCGACTCGGCAACTGAACCTGATCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
.......................................................................................................................................TTA---AC----------GATTAACGGGTATAAAAAGTA--------------C...................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
.............................................................................................................................................................................................T------GATAA-------------------------GTCAATAAAGG-------------------------------------AGAT..........................................................................................................................................................................................................................................2111.00100000001000000000
.............................................................................................................................................................................................T------GATAA-------------------------GTCAATAAAGG-------------------------------------AGATTGG.......................................................................................................................................................................................................................................2411.00100000001000000000
.....CTAGATCGACTCGGCAACTGAACCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
............................................A----TACTTTATAT-GGTCAGAAATATA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000000000
..........................................ATA----TACTTTATAT-GGTCAGAAATATATAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000000000
....................AACTGAACCTGATCAAAAATATATA----...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000010000000
..........................................ATA----TACTTTATAT-GGTCAGAAATATATA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
......................................ATATATA----TACTTTATAT-GGTCAGAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2680.75600000013020000000
....................................................................................................................................TACTTA---AC----------GATTAACGGGTA...........................................................................................................................................................................................................................................................................................................................................................2020.50100000010000000000
....................................................................................................T-------TTCAACGAATCTAGTATACCCTTTT...........................................................................................................................................................................................................................................................................................................................................................................................26200.30600050000000010000
.........................................................................................TGTTACATACTT-------TTCAACGAATCTAGTA....................................................................................................................................................................................................................................................................................................................................................................................................28200.25500000050000000000
.....................................................................................TACCTGTTACATACTT-------TTCAACGAA...........................................................................................................................................................................................................................................................................................................................................................................................................25200.25500000010220000000
..TGGCTAGATCGACTCGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.20400000000103000000
....................................................................................................T-------TTCAACGAATCTAGTATACCCTTTTAC.........................................................................................................................................................................................................................................................................................................................................................................................28200.15300010000200000000
......................................ATATATA----TACTTTATAT-GGTCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2380.13100000010000000000
......................................ATATATA----TACTTTATAT-GGTCAGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2580.13100000001000000000
......................................ATATATA----TACTTTATAT-GGTCAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.13100000000010000000
........................................ATATA----TACTTTATAT-GGTCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.11100000000010000000
.........................................TATA----TACTTTATAT-GGTCAGAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2390.11100000010000000000
...............................................................................................ATACTT-------TTCAACGAATCTAGT.....................................................................................................................................................................................................................................................................................................................................................................................................21200.10220000000000000000
.............................................................................................ACATACTT-------TTCAACGAATCTAGTA....................................................................................................................................................................................................................................................................................................................................................................................................24200.10200000000000020000
........................................................................................CTGTTACATACTT-------TTCAACGAATCTAGT.....................................................................................................................................................................................................................................................................................................................................................................................................28200.10200000001100000000
..........................................ATA----TACTTTATAT-GGTCAGAAATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................24120.08100000001000000000
......................................ATATATA----TACTTTATAT-GGTCAGAAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................27150.07100000001000000000
.....................................................................................TACCTGTTACATACTT-------TTCAACGAATC.........................................................................................................................................................................................................................................................................................................................................................................................................27180.06100000000010000000
...........................................................................................TTACATACTT-------TTCAACGAATCTAG......................................................................................................................................................................................................................................................................................................................................................................................................24200.05100000000010000000
............................................................................................................TTCAACGAATCTAGTATACCCTTTTAC.........................................................................................................................................................................................................................................................................................................................................................................................27200.05100010000000000000
.....CTAGATCGACTCGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15200.05100000010000000000
............................................................................................TACATACTT-------TTCAACGAA...........................................................................................................................................................................................................................................................................................................................................................................................................18200.05100000001000000000
........................................................................................CTGTTACATACTT-------TTCAACGAATCTA.......................................................................................................................................................................................................................................................................................................................................................................................................26200.05100000000010000000
....................................................................................................T-------TTCAACGAATCTAGTATACCCTT.............................................................................................................................................................................................................................................................................................................................................................................................24200.05101000000000000000
...................................................................................................TT-------TTCAACGAATCTAGTATACCCTTTT...........................................................................................................................................................................................................................................................................................................................................................................................27200.05100000010000000000
droSec2
CATGGTTAGATCAAATGGGCTATTGATCCTGATCAAGGATATACATATATACTTTATAT-AGTCGGGAACACTTCAT------TCTGCCTGTTACATACTT-------TTCAACGAATATAGTACACCCTTTCGCTCT---AC----------CAGTAACGGGTAAAAATAC---CA-----------GTAAC--CAGTA--------------------A-----CG---AAAAAATT-----------------------------------------ATTAC------AGA------------------C-----GCGA----------------------------------------------GGGCGGCTGGAAACAGG----------------------------------------------------CTC------------------------------------------TT--------------------------AGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
CATGGCCAAATCGACTCGGCTATTGATCCTGATCAAGAATATATA----TACTTTATAT-GGTCGGAAACGCTTCCT------TCTGCCTGTTACATACTT-------TTCAACGAATCTAGTATACCCTTTTACTCT---AC----------GAGTAACGGGTATAAATAT---AT-----------TTATT--CAGTT--------------------A-----AGTAG-------------T---------------------------------------------------------------------------------------------------------------------AGTAGT-TTTCC-----------CTAGT----------------GTAGACGGGAACGTTTCA-----GGT-----------GAG-----GGTGCATGG---CTCAGAT--TA--AACATTAT--------------------------TTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................CGGCTATTGATCCTGATCAAGAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.15303000000000
droEre2
----GCCAGATCGACTCGGCTGTTGATCCTGATCAAGAATATATA----TACTATATACTGGTCGGAAACGCTTCTT------TCTGCCTGTTACATAGTT-------TTCAACGAATCTAGTATACCCTTTTACCTT---AC----------GAC-------CATAAAAAT---TTGGTATATTATC-ATGG----AA-----------------------------------CAATTTTGCG-GGG------------GA-----------CTCATTGCCAA-AACCATTTT------------------G-----GTCA----------------------------------------------TGCCGAC------------------------------------------------------------TA--------------------TAA---CGCCTAC------------AAGCTGTAAAAAACTGTCACG-CT--TACASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/17/2015 at 11:14 PM