ID:

dmo_858

 Coordinate:

scaffold_6482:1872608-1872758 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.6 -16.1 -15.6

Flybase annnotation

CDS [Dmoj\GI14320-cds]; exon [dmoj_GLEANR_14782:1]; intron [Dmoj\GI14320-in]

No Repeatable elements found

mature
  1. dmo_858  scaffold_6482:1872610-1872632 -
  2. scaffold_6482:2324410-2324432 +
star
  1. scaffold_4610:933-957 -
  2. scaffold_5002:1296-1320 -
  3. scaffold_6004:403-427 -
  4. dmo_858  scaffold_6482:1872666-1872690 -
  5. scaffold_6500:15820738-15820762 -
  6. scaffold_6500:32254162-32254186 +
  7. scaffold_6540:21460686-21460710 +
  8. scaffold_6680:23926520-23926544 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AGGTATAGTAGGCGTGGCTTTGCCATCTTGTGGTGGCTTTACTGGTACTGGTAAGAAGGCAACATTGCGATATGTTATTATATATTATGTGATTAGTTAACTAATATCTTATAGGTATTGAATCAATAGCAAAGGAGCCGAGCAAAATTATGTGGCGTCAGAAATCTATGCAGTTGCATGTGAACAACGTTGCTTTTGAAGGCGACTCTTCGTTGCCAGTTGAAATAATGAAGCTCAAAACTCCTTTAGAG
**********************************************************************************************************************....((...(((((.........(((......((((((..((........))..)))))))))........)))))...))**************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body
........................................ACTGGTACTGGTAAGAAGGCAACA........................................................................................................................................................................................... 24 0 2 2.00 4 4 0 0
........................................ACTGGTACTGGTAAGAAGGCAAC............................................................................................................................................................................................ 23 0 2 2.00 4 2 2 0
...........................................GGTACTGGTAAGAAGGCAACATT......................................................................................................................................................................................... 23 0 2 2.00 4 2 1 1
................................................................................................................................................................................CATGTGAACAACGTTGCTTTTGA.................................................... 23 0 2 1.50 3 2 1 0
...........................................GGTACTGGTAAGAAGGCAACATTGCGA..................................................................................................................................................................................... 27 0 2 1.50 3 3 0 0
............................................GTACTGGTAAGAAGGCAACATTGC....................................................................................................................................................................................... 24 0 2 1.50 3 3 0 0
................................................................................................................................................................................CATGTGAACAACGTTGCTTTTGAAGGC................................................ 27 0 2 1.50 3 3 0 0
......................................................................................................................TGAATCAATAGCAAAGGAGCCGAGC............................................................................................................ 25 0 8 1.38 11 9 2 0
......................................................................................................................TGAATCAATAGCAAAGGAGCCGA.............................................................................................................. 23 0 8 1.25 10 10 0 0
..................................................................................TATTATGTGATTAGTTAACTAATATCTAT............................................................................................................................................ 29 2 1 1.00 1 1 0 0
.................................................................................................................................................................................ATGTGAACAACGTTGCTTTTGAAGGC................................................ 26 0 2 1.00 2 2 0 0
AGGGATAGTAGGCGTGGCTTTGC.................................................................................................................................................................................................................................... 23 1 1 1.00 1 0 1 0
...........................TTGTGGTGGCTTTACTGGTAC........................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0
............................................................................................................................................................................................................ACTCTTCGTTGCCAGTTGAAATA........................ 23 0 1 1.00 1 1 0 0
................................................................................................................................................................................CATGTGAACAACGTTGCTTTTGAAG.................................................. 25 0 2 1.00 2 2 0 0
..............TGGCTTTGCCATCTTGTGGTGGCTT.................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0
..................................................................................TATTATGTGATTAGTTAACTAATA................................................................................................................................................. 24 0 1 1.00 1 1 0 0
......................................................................................................................TGAATCAATAGCAAAGGAGCCGAG............................................................................................................. 24 0 8 0.88 7 6 0 1
.........................................................................................................................ATCAATAGCAAAGGAGCCGAGC............................................................................................................ 22 0 8 0.88 7 4 2 1
............................................GTACTGGTAAGAAGGCAACATTGCGAT.................................................................................................................................................................................... 27 0 2 0.50 1 1 0 0
................................................................................................................................................................................CATGTGAACAACGTTGCTTTTGAAGGCG............................................... 28 0 2 0.50 1 1 0 0
............................................GTACTGGTAAGAAGGCAACATTGCGA..................................................................................................................................................................................... 26 0 2 0.50 1 1 0 0
.....................................................................................................................................................................................GAACAACGTTGCTTTTGAAGGCG............................................... 23 0 2 0.50 1 0 0 1
...................................................................................ATTATGTGATTAGTTAACTAAT.................................................................................................................................................. 22 0 2 0.50 1 1 0 0
..................................................................................TATTATGTGATTAGTTAACTAAT.................................................................................................................................................. 23 0 2 0.50 1 1 0 0
.........................................CTGGTACTGGTAAGAAGGCAA............................................................................................................................................................................................. 21 0 2 0.50 1 1 0 0
................................................TGGTAAGAAGGAAACATTGCGATA................................................................................................................................................................................... 24 1 2 0.50 1 1 0 0
............................................GTACTGGTAAGAAGGCAACATT......................................................................................................................................................................................... 22 0 2 0.50 1 1 0 0
..............................................ACTGGTAAGAAGGCAACATTGC....................................................................................................................................................................................... 22 0 2 0.50 1 1 0 0
..................................................................................................................................................................................TGTGAACAACGTTGCTTTTGAAGGC................................................ 25 0 2 0.50 1 1 0 0
........................................ACTGGTACTGGTAAGAAGGCAACATT......................................................................................................................................................................................... 26 0 2 0.50 1 0 0 1
...........................................GGTACTGGTAAGAAGGCAACATTGC....................................................................................................................................................................................... 25 0 2 0.50 1 0 1 0
..................................................................................................................................................................................TGTGAACAACGTTGCTTTTGAAGG................................................. 24 0 2 0.50 1 1 0 0
.........................................................................................................................ATCAATAGCAAAGGAGCCGAG............................................................................................................. 21 0 8 0.25 2 2 0 0
.........................................................................................................................ATCAATAGCAAAGGAGCCGAGCA........................................................................................................... 23 0 8 0.25 2 1 0 1
......................................................................................................................TGAATCAATAGCAAAGGAGC................................................................................................................. 20 0 8 0.25 2 1 1 0
.......................................................................................................................GAATCAATAGCAAAGGAGCCG............................................................................................................... 21 0 8 0.25 2 2 0 0
......................................................................................................................TTAATCAATAGCAAAGGAGCCGAGC............................................................................................................ 25 1 8 0.13 1 0 1 0
......................................................................................................................TGAATCAATAGCAAAGGAGCC................................................................................................................ 21 0 8 0.13 1 0 1 0
...................................................................................................................TATTGAATCAATAGCAAAGGAGCCGAGC............................................................................................................ 28 0 8 0.13 1 1 0 0
......................................................................................................................TGAATCAATAGCAAAGGAGCCGAGCAA.......................................................................................................... 27 0 8 0.13 1 1 0 0
.....................................................................................................................TTGAATCAATAGCAAAGGAGC................................................................................................................. 21 0 8 0.13 1 1 0 0
.........................................................................................................................AGCAATAGCAAAGGAGCCGAGC............................................................................................................ 22 1 8 0.13 1 0 1 0
......................................................................................................................TTAATCAATAGCAAAGGAG.................................................................................................................. 19 1 8 0.13 1 0 1 0
.........................................................................................................................ATCAATAGCAAAGGAGCCGAGCAAAA........................................................................................................ 26 0 8 0.13 1 1 0 0
......................................................................................................................TGAATCAATAGCAAAGGAGCCGAT............................................................................................................. 24 1 8 0.13 1 1 0 0
.........................................................................................................................ATCAATAGCAAAGGAGCCGAGCAAAAT....................................................................................................... 27 0 8 0.13 1 1 0 0
......................................................................................................................TGATTCAATAGCAAAGGAGCCGAGC............................................................................................................ 25 1 8 0.13 1 0 1 0
......................................................................................................................TGAATCAATAGCAAAGGAGCCG............................................................................................................... 22 0 8 0.13 1 1 0 0

Anti-sense strand reads

TCCATATCATCCGCACCGAAACGGTAGAACACCACCGAAATGACCATGACCATTCTTCCGTTGTAACGCTATACAATAATATATAATACACTAATCAATTGATTATAGAATATCCATAACTTAGTTATCGTTTCCTCGGCTCGTTTTAATACACCGCAGTCTTTAGATACGTCAACGTACACTTGTTGCAACGAAAACTTCCGCTGAGAAGCAACGGTCAACTTTATTACTTCGAGTTTTGAGGAAATCTC
****************************************************....((...(((((.........(((......((((((..((........))..)))))))))........)))))...))********************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V056
head
..................................................................................................................................................................................................................GCAACGGTCAACTTTATTACTTCGAGT.............. 27 0 1 23.00 23 20 3 0 0
...................................................................................................................................................................................................................CAACGGTCAACTTTATTACTTCGAGT.............. 26 0 1 22.00 22 13 9 0 0
....................................................................................................GATTATAGAATATCCATAACTTAGTTAT........................................................................................................................... 28 0 1 17.00 17 17 0 0 0
.......................................................................................................TATAGAATATCCATAACTTAGTTAT........................................................................................................................... 25 0 1 17.00 17 11 6 0 0
...................................................................................................TGATTATAGAATATCCATAACTTAGTTAT........................................................................................................................... 29 0 1 14.00 14 13 0 1 0
.....................................................................................................................................................................................................................ACGGTCAACTTTATTACTTCGAGT.............. 24 0 1 14.00 14 13 1 0 0
.........................AGAACACCACCGAAATGACCATGACCAT...................................................................................................................................................................................................... 28 0 1 13.00 13 11 2 0 0
........................TAGAACACCACCGAAATGACCATGAC......................................................................................................................................................................................................... 26 0 1 11.00 11 9 2 0 0
.............................CACCACCGAAATGACCATGACCATT..................................................................................................................................................................................................... 25 0 1 10.00 10 4 6 0 0
........................................................................................................ATAGAATATCCATAACTTAGTTAT........................................................................................................................... 24 0 1 10.00 10 8 2 0 0
................................................................................................................................................................CTTTAGATACGTCAACGTACACTTGT................................................................. 26 0 2 9.00 18 18 0 0 0
.................................................................................................................................................................................................................AGCAACGGTCAACTTTATTACTTCGAGT.............. 28 0 1 9.00 9 7 2 0 0
................................................................................................................................................................................................................AAGCAACGGTCAACTTTATTACTTCGAGT.............. 29 0 1 8.00 8 6 2 0 0
........................TAGAACACCACCGAAATGACCATGACCAT...................................................................................................................................................................................................... 29 0 1 7.00 7 7 0 0 0
........................................................................................................ATAGAATATCCATAACTTAGTTATCGT........................................................................................................................ 27 0 1 7.00 7 7 0 0 0
..........................GAACACCACCGAAATGACCATGACCATT..................................................................................................................................................................................................... 28 0 1 7.00 7 4 3 0 0
.........................AGAACACCACCGAAATGACCATGAC......................................................................................................................................................................................................... 25 0 1 7.00 7 6 1 0 0
..........................GAACACCACCGAAATGACCATGACCAT...................................................................................................................................................................................................... 27 0 1 7.00 7 3 4 0 0
..........................GAACACCACCGAAATGACCATGAC......................................................................................................................................................................................................... 24 0 1 7.00 7 5 2 0 0
...............................................................................................................................................................TCTTTAGATACGTCAACGTACACTTGT................................................................. 27 0 2 7.00 14 14 0 0 0
...................................................................................................................................................................................................................CAACGGTCAACTTTATTACTTCGATT.............. 26 1 1 6.00 6 0 6 0 0
..................................................................................................................................................................................................................GCAACGGTCAACTTTATTACTTCGAG............... 26 0 1 6.00 6 6 0 0 0
......................................................................................................................................................................................................................CGGTCAACTTTATTACTTCGAGT.............. 23 0 1 6.00 6 4 2 0 0
............................................................................................................................................................................................................TGAGAAGCAACGGTCAACTTTATTACTT................... 28 0 1 5.00 5 3 1 1 0
.................................................................................................................................................................TTTAGATACGTCAACGTACACTTGT................................................................. 25 0 2 5.00 10 10 0 0 0
.................................................................ACGCTATACAATAATATATAATACACT............................................................................................................................................................... 27 0 2 4.50 9 9 0 0 0
......................................................................................................TTATAGAATATCCATAACTTAGTTAT........................................................................................................................... 26 0 1 4.00 4 4 0 0 0
...................................................................................................................................................................................................................CAACGGTCAACTTTATTACTTCGAG............... 25 0 1 4.00 4 4 0 0 0
............................ACACCACCGAAATGACCATGACCATT..................................................................................................................................................................................................... 26 0 1 4.00 4 4 0 0 0
.............................CACCACCGAAATGACCATGACCAT...................................................................................................................................................................................................... 24 0 1 4.00 4 2 2 0 0
..................................................................................................................................................................TTAGATACGTCAACGTACACTTGT................................................................. 24 0 2 3.50 7 5 2 0 0
.....................................................................................................................................................................................................................ACGGTCAACTTTATTACTTCGAG............... 23 0 1 3.00 3 3 0 0 0
....................................................................................................................................................................................................................AACGGTCAACTTTATTACTTCGAGT.............. 25 0 1 3.00 3 3 0 0 0
.............................................................................................................................................................................................................GAGAAGCAACGGTCAACTTTATTACTT................... 27 0 1 3.00 3 1 2 0 0
.........................................................................................................................................GGCTCGTTTTAATACACCGCAGTCT......................................................................................... 25 0 1 3.00 3 3 0 0 0
.............................................................................................................................................................AGTCTTTAGATACGTCAACGTACACTTGT................................................................. 29 0 1 3.00 3 3 0 0 0
........................................................................................................................................CGGCTCGTTTTAATACACCGCAGTCT......................................................................................... 26 0 1 3.00 3 2 1 0 0
............................ACACCACCGAAATGACCATGAC......................................................................................................................................................................................................... 22 0 1 3.00 3 3 0 0 0
..............................................................................................................................................................................................................AGAAGCAACGGTCAACTTTATTACTT................... 26 0 1 3.00 3 2 0 1 0
........................................................................................................................................................................................................CCGCTGAGAAGCAACGGTCAACTT........................... 24 0 1 3.00 3 1 2 0 0
............................................................................................................................................................................................................TGAGAAGCAACGGTCAACTTTATT....................... 24 0 1 2.00 2 0 2 0 0
.......................................................................................................................................................................................................................GGTCAACTTTATTACTTCGAGT.............. 22 0 1 2.00 2 2 0 0 0
............................ACACCACCGAAATGACCATGACCAT...................................................................................................................................................................................................... 25 0 1 2.00 2 1 1 0 0
.........................................................................................................................................................................................................CGCTGAGAAGCAACGGTCAACTTTAT........................ 26 0 1 2.00 2 2 0 0 0
.......................................................................................................................................................................................................................GGTCAACTTTATTACTTCGAGTTTTGA......... 27 0 1 2.00 2 2 0 0 0
................................................................................................................................................TTTAATACACCGCAGTCTTTAGAT................................................................................... 24 0 1 2.00 2 2 0 0 0
......................................................................................................................................................................................................................CGGTCAACTTTATTACTTCGAGTTTT........... 26 0 1 2.00 2 1 1 0 0
..........................................................................................................AGAATATCCATAACTTAGTTATCGT........................................................................................................................ 25 0 1 2.00 2 2 0 0 0
............................ACACCACCGAAATGACCATGACCA....................................................................................................................................................................................................... 24 0 1 2.00 2 2 0 0 0
.................................................................................................................................................................................................................AGCAACGGTCAACTTTATTACTTCGATT.............. 28 1 1 2.00 2 0 2 0 0
.........................................................................................................TAGAATATCCATAACTTAGTTATCGT........................................................................................................................ 26 0 1 2.00 2 2 0 0 0
...............................................................................................................................................................................................................GAAGCAACGGTCAACTTTATTACTT................... 25 0 1 2.00 2 2 0 0 0
............................ACACCACCGAAATGACCATGACCATTCT................................................................................................................................................................................................... 28 0 1 2.00 2 1 1 0 0
............................ACACCACCGAAATGACCATGACCATTC.................................................................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0
..................................................................................................................................................................................ACACTTGTTGCAACGAAAACTTCCGCT.............................................. 27 0 2 1.50 3 3 0 0 0
...................................................................................................................................................................................................................CAACGGTCAACTTTATTAATTCGAGT.............. 26 1 1 1.00 1 0 1 0 0
...................................................................................................................................................................TAGATACGTCAACGTACACTTGT................................................................. 23 0 2 1.00 2 2 0 0 0
.............................CACCACCGAAATGACCATGA.......................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0
.................................ACCGAAATGACCATGACCATTCTTCCGT.............................................................................................................................................................................................. 28 0 2 1.00 2 2 0 0 0
...................................................................................................................................................................................................................CAACGGTCAACTTTATTACTTCGAGTTT............ 28 0 1 1.00 1 1 0 0 0
..........................................................................................................................AGTTATCGTTTCCTCGGCTCGTTTTAAT..................................................................................................... 28 0 1 1.00 1 1 0 0 0
......................................................................................................................................................................................................................CGGTCAACTTTATTACTTCGAGTT............. 24 0 1 1.00 1 1 0 0 0
............................................................................................................................................................................................................CGAGAAGCAACGGTCAACTTTATTACT.................... 27 1 1 1.00 1 0 1 0 0
.........................AGAACACCACCGAAATGACCATGACCATT..................................................................................................................................................................................................... 29 0 1 1.00 1 0 1 0 0
..........................................................................................................AGAATATCCATAACTTAGTTATCGTT....................................................................................................................... 26 0 1 1.00 1 1 0 0 0
...............................................................................................CGATTGATTATAGAATATCCATAACTT................................................................................................................................. 27 1 1 1.00 1 1 0 0 0
..............................................................................................................................................................GTCTTTAGATACGTCAACGTACACT.................................................................... 25 0 1 1.00 1 1 0 0 0
.............................................................................................................................................CTTTTTAATACACCGCAGTCTTTAGA.................................................................................... 26 1 1 1.00 1 1 0 0 0
..................................................................................................................................................TAATACACCGCAGTCTTTAGATACGT............................................................................... 26 0 1 1.00 1 1 0 0 0
..................................................................CGCTATACAATAATATATAATACACT............................................................................................................................................................... 26 0 2 1.00 2 1 1 0 0
.......CATCCGCACCGAAACGGTAGAACACC.......................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0
.................................................................................................................................................................................................................AGCAACGGTCAACTTTATTACTTCGAG............... 27 0 1 1.00 1 1 0 0 0
..............................................................................................................................................................GTCTTTAGATACGTCAACGTACACTTGT................................................................. 28 0 1 1.00 1 1 0 0 0
.......................................................................................................TATAGAATATCCATAACTTAGTTAGC.......................................................................................................................... 26 1 1 1.00 1 0 1 0 0
........................TAGAACACCACCGAAATGATCATGAC......................................................................................................................................................................................................... 26 1 1 1.00 1 0 1 0 0
...............................................................................................................................................................................................................GAAGCAACGGTCAACTTTATTACTTC.................. 26 0 1 1.00 1 1 0 0 0
......................................................................................................................................................................................................................CGGTCAACTTTATTACTTCGAG............... 22 0 1 1.00 1 1 0 0 0
................................................................................................................................................................................................................AAGCAACGGTCAACTTTATTACTTCGAG............... 28 0 1 1.00 1 1 0 0 0
..........................................................................................................................................................................................................GCTGAGAAGCAACGGTCAACTTT.......................... 23 0 1 1.00 1 1 0 0 0
.......................GTAGAACACCACCGAAATGACCATGAC......................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0
.............................CACCACCGAAATGACCATGACCATCCTT.................................................................................................................................................................................................. 28 1 1 1.00 1 0 1 0 0
........................TAGAACACCACCGAAATGACCATGACCA....................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0
.....................................................................................................................................CCTCGGCTCGTTTTAATACACCGCAGT........................................................................................... 27 0 1 1.00 1 1 0 0 0
..................................................................................................................................................................................................................GCAACGGTCAACTTTATTACTTCGATT.............. 27 1 1 1.00 1 0 1 0 0
.................................................................ACGCTATACAATAATATATAATACAC................................................................................................................................................................ 26 0 2 1.00 2 2 0 0 0
..........................GAACACCACCGAAATGACCATGACCTAG..................................................................................................................................................................................................... 28 3 1 1.00 1 0 1 0 0
..........................................................................................................................................................................................................GCTGAGAAGCAACGGTCAACTT........................... 22 0 1 1.00 1 1 0 0 0
.......................................................................................................TATAGAATATCCATAACTTAGTTA............................................................................................................................ 24 0 1 1.00 1 1 0 0 0
.....................................................................................................ATTATAGAATATCCATAACTTAGTTAT........................................................................................................................... 27 0 1 1.00 1 1 0 0 0
.................................................................................................................................................TTAATACACCGCAGTCTTTAGATACGT............................................................................... 27 0 1 1.00 1 1 0 0 0
........................................................................................................ATAGAATATCCATAACTTAGTTA............................................................................................................................ 23 0 1 1.00 1 1 0 0 0
.........................TGAACACCACCGAAATGACCATGAC......................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0
.........................AGAACACCACCGAAATGACCATGACCGT...................................................................................................................................................................................................... 28 1 1 1.00 1 0 1 0 0
....................................................................................................GATTATAGAATATCCATAACTTAG............................................................................................................................... 24 0 1 1.00 1 1 0 0 0
.......................TTTGAACACCACCGAAATGACCATGAC......................................................................................................................................................................................................... 27 2 1 1.00 1 1 0 0 0
.......................................................................................................TATAGAATATCCATAACTTAGTTATC.......................................................................................................................... 26 0 1 1.00 1 1 0 0 0
.............................................................................................................................TATCGTTTCCTCGGCTCGTTTTAAT..................................................................................................... 25 0 1 1.00 1 1 0 0 0
.................................................................................................................................................................................................................................ATTACTTCGGGTTTTGAGGAAATCT. 25 1 1 1.00 1 1 0 0 0
.........................AGAACACCACCGAAATGACCATG........................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0
.......................................................................................................................................................................................................TCCTCTGAGAAGCGACGGTCAACTTTAT........................ 28 2 1 1.00 1 0 1 0 0
................................................................................................................................................TTTAATACACCGCAGTCTTTAGA.................................................................................... 23 0 1 1.00 1 1 0 0 0
...............................................................................................................................TCGTTTCCTCGGCTCGTTTTAAT..................................................................................................... 23 0 1 1.00 1 1 0 0 0
...................................................................................................................................................................................................................CAACGGTCAACTTTATTACTTCGAGTTTT........... 29 0 1 1.00 1 1 0 0 0
........................TAGAACACCACCGAGATGACCATGAC......................................................................................................................................................................................................... 26 1 1 1.00 1 0 1 0 0
..........................GAACACCACCGAAATGACCATGACTA....................................................................................................................................................................................................... 26 1 1 1.00 1 0 1 0 0
....................................................................................................................................................................AGATACGTCAACGTACACTTGT................................................................. 22 0 2 1.00 2 2 0 0 0
.................................................................................................................................................TTAATACACCGCAGTCTTTAGATACG................................................................................ 26 0 1 1.00 1 1 0 0 0
....................................................................................................GATTATAGAATATCCATAATTTAGTTAT........................................................................................................................... 28 1 1 1.00 1 1 0 0 0
..........CCGCACCGAAACGGTAGAACA............................................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0
.......................................................................................................TATAGAATATGCATAACTTAGTTAT........................................................................................................................... 25 1 1 1.00 1 1 0 0 0
..............................................................................................................................................................CTCTTTAGATACGTCAACGTACACTTGT................................................................. 28 1 1 1.00 1 1 0 0 0
.........................................................................................................................TAGTTATCGTTTCCTCGGCTCGTTTTAAT..................................................................................................... 29 0 1 1.00 1 1 0 0 0
...................................................................................................TGATTATAGAATATCCATAACCTAGTTAT........................................................................................................................... 29 1 1 1.00 1 1 0 0 0
...........................AACACCACCGAAATGACCATGACCA....................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0
........................................................................................................................................................................................................CCGCTGAGAAGCAACGGTCAACGT........................... 24 1 1 1.00 1 0 1 0 0
.......................................................................................................TATAGAATATCCATAACTTAGGTAT........................................................................................................................... 25 1 1 1.00 1 0 1 0 0
................................................................................................................................................................................................................AAGCAACGGTCAACTTTATTAATTCGATT.............. 29 2 1 1.00 1 0 1 0 0
....................................................................................................................................................................................................................AACGGTCAACTTTATTACTTCGAG............... 24 0 1 1.00 1 1 0 0 0
..........................................................................................................................................................CGCAGTCTTTAGATACGTCAA............................................................................ 21 0 1 1.00 1 1 0 0 0
..........................GAACACCACCGAAATGACCATGACCA....................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0
...........................................................................................................CTATATCCATAACTTAGTTAT........................................................................................................................... 21 2 1 1.00 1 1 0 0 0
...........................AACACCACCGAAATGACCATGACCATTCT................................................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0
........................TAGAACACCACCGAAATGACCATGA.......................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0
.....................................................................................................ATTATAGAATATCCATAACTTAGTTA............................................................................................................................ 26 0 1 1.00 1 1 0 0 0
........................................................................................................ATAGAATATCCATAACTTAGTTATC.......................................................................................................................... 25 0 1 1.00 1 0 1 0 0
.....................CGGTAGAACACCACCGAAATGACCAT............................................................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0
...........................AACACCACCGAAATGACCATGACCATT..................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0
.............................................................................................................................................CGTTTTAATACACCGCAGTCTTTAGAT................................................................................... 27 0 1 1.00 1 1 0 0 0
.................................................................................................................................................................................................................AGCAACGGTCAACTTTATTACTTCGAGTG............. 29 1 1 1.00 1 1 0 0 0
.......................TTAGAACACCACCGAAATGACCATGAC......................................................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0
.......................................................................................................TATAGAATATCCACAACTTAGTTAT........................................................................................................................... 25 1 1 1.00 1 0 1 0 0
.............................CACCACCGAAATGACCATGACCATTCT................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0
................................................................................................................................CGTTTCCTCGGCTCGTTTTAAT..................................................................................................... 22 0 1 1.00 1 1 0 0 0
..........................GAACACCACCGAAATGACCATGACC........................................................................................................................................................................................................ 25 0 1 1.00 1 0 1 0 0
.....................................AAATGACCATGACCATTCTTCCGTTGTA.......................................................................................................................................................................................... 28 0 2 1.00 2 2 0 0 0
..........................GAACACCATCGAAATGACCATGACCAT...................................................................................................................................................................................................... 27 1 1 1.00 1 0 1 0 0
.......................GTAGAACACCACCGAAATGACCATG........................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0
...............................................................................................................................................TTTTAATACACCGCAGTCTTTAGATACGT............................................................................... 29 0 1 1.00 1 1 0 0 0
..........................................................................................................AGAATATCCATAACTTAGTTATCGTTT...................................................................................................................... 27 0 1 1.00 1 1 0 0 0
...................................................................................................TGATTATAGAATATCCATAACTT................................................................................................................................. 23 0 1 1.00 1 1 0 0 0
.........................................................................................................TAGAATATCCATAACTTAGTTAT........................................................................................................................... 23 0 1 1.00 1 1 0 0 0
.............................................................................................................................................................................................................TAGAAGCAACGGTCAACTTTATTACTT................... 27 1 1 1.00 1 0 1 0 0
............................ACACCACCGAAATGACCATGACCATTCTT.................................................................................................................................................................................................. 29 0 1 1.00 1 1 0 0 0
.........................AGAACACCACCGAAATGACCAGGAC......................................................................................................................................................................................................... 25 1 1 1.00 1 0 1 0 0
.....................CGGTAGAACACCACCGAAATGACC.............................................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0
.................................ACCGAAATGACCATGACCATTCTTCC................................................................................................................................................................................................ 26 0 2 0.50 1 1 0 0 0
..............................ACCACCGAAATGACCATGACCAT...................................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0
................................................................................................................................................................CTTTAGATACGTCAACGTACACTTTT................................................................. 26 1 2 0.50 1 0 1 0 0
...................................CGAAATGACCATGACCATT..................................................................................................................................................................................................... 19 0 2 0.50 1 0 1 0 0
.................................................................................................................................................................TTTAGATACGTCAACGTACACTTGTT................................................................ 26 0 2 0.50 1 1 0 0 0
................................CACCGAAATGACCATGACCATTC.................................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0
..................................CCGAAATGACCATGACCATT..................................................................................................................................................................................................... 20 0 2 0.50 1 0 1 0 0
.........................................................CCGTTGTAACGCTATACAATAATAT......................................................................................................................................................................... 25 0 2 0.50 1 0 1 0 0
............................................................................................................................................................................CAACGTACACTTGTTGCAACGAAAAC..................................................... 26 0 2 0.50 1 1 0 0 0
..............................................TGACCATTCTTCCGTTGTAACGCTAT................................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0
............................................................................................................................................................................CAACGTACACTTGTTGCAACGAAAACT.................................................... 27 0 2 0.50 1 1 0 0 0
...............................................................................................................................................................TCTTTAGATACGTCAACGCACACTCGT................................................................. 27 2 2 0.50 1 0 1 0 0
.........................................GACCATGACCATTCTTCCGTTGTAACGC...................................................................................................................................................................................... 28 0 2 0.50 1 1 0 0 0
...............................................................................................................................................................CCTTTAGATACGTCAACGTACACTTGT................................................................. 27 1 2 0.50 1 0 1 0 0
................................................................................................................................................................CTTTAGATACGTCAACGTACACTTG.................................................................. 25 0 2 0.50 1 1 0 0 0
....................................GAAATGACCATGACCATTCTTCCGTTGT........................................................................................................................................................................................... 28 0 2 0.50 1 1 0 0 0
...................................CGAAATGACCATGACCATTCT................................................................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0
................................................................AACGCTATACAATAATATATAATACACT............................................................................................................................................................... 28 0 2 0.50 1 1 0 0 0
.......................................ATGACCATGACCATTCTTCCGTTGT........................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0
...............................................GACCATTCTTCCGTTGTAACGCTATAC................................................................................................................................................................................. 27 0 2 0.50 1 1 0 0 0
..............................ACCACCGAAATGACCATGACCATT..................................................................................................................................................................................................... 24 0 2 0.50 1 1 0 0 0
................................................................................................................................................................CTTTAGATACGTCAACGTACACTTGTG................................................................ 27 1 2 0.50 1 1 0 0 0
...............................................................................................................................................................................CGTACACTTGTTGCAACGAACTT..................................................... 23 3 2 0.50 1 0 1 0 0
......................................AATGACCATGACCATTCTTCCGTT............................................................................................................................................................................................. 24 0 2 0.50 1 1 0 0 0
................................................................................................................................................................CTTTAGATACGTCAACGTTCACTTGT................................................................. 26 1 2 0.50 1 1 0 0 0
......................................................................................................................................................................ATACGTCAACGTACACTTGT................................................................. 20 0 2 0.50 1 1 0 0 0
............................................CATGACCATTCTTCCGTTGTAACGCT..................................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0
...............................................................................................................................................................TCTTTAGATACGTCAAAGTACACTTGT................................................................. 27 1 2 0.50 1 0 1 0 0
...................................................................................................................................................................................................................CAACGGTCAACTTTATTA...................... 18 0 2 0.50 1 0 1 0 0
................................CACCGAAATGACCATGACCATTCTTCCTT.............................................................................................................................................................................................. 29 1 2 0.50 1 0 1 0 0
................................CACCGAAATGACCATGACCATTCTTCCGT.............................................................................................................................................................................................. 29 0 2 0.50 1 1 0 0 0
...............................................................................................................................................................TCTTTAGATACGACAACGTACACTTGT................................................................. 27 1 2 0.50 1 1 0 0 0
.......................................ATGACCATGACCATTCTTCCGTTGTA.......................................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0
...................................................................GCTATACAATAATATATAATACACT............................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0
................................................................................................................................................................CTTTAGATACGTCAACGTACACTTGTT................................................................ 27 0 2 0.50 1 1 0 0 0
........................................TGACCATGACCATTCTTCCGTTGTA.......................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0
.................................................................ACGCTATACAATAATATATAATAC.................................................................................................................................................................. 24 0 2 0.50 1 1 0 0 0
...............................CCACCGAAATGACCATGACCATTCT................................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0
..................................CCGAAATGACCATGACCATTCTTCCGTT............................................................................................................................................................................................. 28 0 2 0.50 1 0 1 0 0
...................................................................................................................CTAACTTAGTTATCGTTTCCTCGGCTCG............................................................................................................ 28 1 8 0.13 1 1 0 0 0
................................................................................................................................................................................................GGGAACTTCCGGTGAGAAG........................................ 19 3 20 0.05 1 0 0 0 1
................................................................................................................................................................................................GAGAACTTCTGGTGAGAAG........................................ 19 3 20 0.05 1 0 0 0 1
............................................................................................................................................................CAGTCTTGAGATAGGTTAA............................................................................ 19 3 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6482:1872558-1872808 - dmo_858 AGGTATAGTAGGCGTGGCTTTGCCATCTTGTGGTGGCTTTACTGGT--ACTGGTAAGA-AGGCAACATTGCGATATGTTATTATATATTATGTGATT-AGTTAACTAATAT-----CTTATAGGTATTGAATCAATAGCAAAGGAGCCGAGCAAAATTATGTGGCGTCAGAAATCTATGCAGTTGCATGTGAACAACGTTGCTTTTGAAGGCGACTCTTCGTTGCCAGTTGAAATAA-TGAAGCTCAAAACTCCTTTAGAG
droWil2 scf2_1100000004958:1156378-1156599 - AAGTT-----------------------------------ACTGGT--ACTGGTAAGA-AGGCAACATTGCGATATGTTATTATATATTATGTGATTTAGTTAATTAATATCTTATGGCAAAGGTATTATATCAATAGCAAAGGAGCCGAGCAAAATTATGTGGCGTCAGAAATCTATGCAGTTTCATGTGAACAACGTTGCTTTTCAAGGCGACTCTTCATTGCCAGTTGAAATAA-TGAAATTCAAAACTCCTTTAGAG
dp5 3:16930582-16930799 + AGATT------------------------CTGGTGGCTTCAATGGT--TTTGGTAAGC-AAACATAATTGCGATATGTTAAA------CAAGTTAGT-AATTAATTTA--------TGTATAGGTATTGAATCAATAACAAAGGAGCCGACTAAAATTATATGGCGAAAGCAATGTATGCAGTTGAAAGTCAACGACATAGCCTTTCGAGGAGACTCTTCGCTGCCAGCTGAAATAA-TGGAGCTCAAGACTCCATTACAG
droPer2 scaffold_144:3801-4018 + AGATT------------------------CTGGTGGCTTCAATGGT--TTTGGTAAGC-AAACATAATTGCGATATGTTAAA------CAAGTGAGT-AATTAATTTA--------TGTATAGGTATTGAATCAATAACAAAGGAGCCGACTAAAATTATATGGCGAAAGCAATATATGCAGTTGAATGTCAACGACATAGCCTTTCGAGGAGACTCTTCGCTGCCAGCTGAAATAA-TGGAGCTCAAGACTCCATTACAG
droAna3 scaffold_12984:68951-69196 + AGATTCGGCGTGCGCATCTCCGCCAAATTCGGGTGGATTCAATGGA--GCTGGTAAACCAAATTTAATTGCTATGTGTTACT------TTTGTGAAT-AATTAGTTTTTTT-----TACACAGGTATTGAATCAATAACAAAAGATTCCAGTAAGATTATGTGGCGAGAGAAATGTATGCAGTTACATGTTAACAATGTAGCATTTCGAGGCGACTTTTCGCTTCCAGCAGACATAA-AGGAGCTCGAAACTCCTCTAGAG
droBip1 scf7180000391581:15848-16090 - AGATTTGGCGTGCGCATCTTCGCCAAATTCTGGTGAGTTCAATGGA--GCTGGTAAGCCAAATTTAAATGCT--GTGTTTTT------TTTGTGACT-AGATAGTTTTATT-----TACAAAGGTATTGAAACAAAAACAAAAGATTCAAGTAAGATTATGTGGCGAGAGAAATGTATGCAGGTGCATGTTAACAATGTAGCATTTCGAGGCGATTTTTCGCTGCCAGCAGAAATAA-GGGCGCTC-AAACTCCTCTACAG
droKik1 scf7180000302209:10992-11233 + ATATTCAGTGTGTACATCTGAGCCTTCTTCTGGTGGTTTCAATTGT--GCCGGTAGGA-AAACTAAATTATATAATGGTACT------CAAATAACT-AATTAATTTA--------TCAACAGATGTTGAATCAATAAACAAGGTGCCGACAAAGATAACATGGCGGCAGCAATCGATGCAGTTGCATGTAAGCGACATAGCTTTTCGGGGAGATTCTTCACTCCCAGATTGTATAA-AGGACCTTAAAACACCGATGCAG
droFic1 scf7180000453162:4064-4308 + AGATTCGGCGTGCGCATCTCCGCCAACTGCTGGTGGGTTCAATGGA--GCTGGTAAGCCAAATTTAATTGCTAC-TGGTATT------TTAGTGTAC-AATTAGTTTTATT-----TACACAGGTATTGAATCAATAACAAAAGATTCGAGTAAGATTCTGTGGCGAGAGAAATGTATGCAGTTGCATGTTAACAATGTAGCATTTCGAGGAGATTTTTCGCTGCCATCAGAAATAA-AGGAGCTCGAAACTCCTCTAGAG
droRho1 scf7180000774055:7158-7393 - AGATTCGACCTGCGCATCTCCGCCAACTTCTGGTGGGTTCGATGGA--GCTGGTAAGCCAAATTCAATTGC--TGTGTTATT------TTAGTGAAT-AATTAGTTTTATT-----TACACAGGTA--------ATAACAAAAGATATGAATAAGATTATGTGGCGAGAGAAATGTATGCAGTTGCATGTTAACAATGTAGCATTTCGAGTCGATTTTTCGCTGCCAGCTGAAATAA-AGAAACTCGAAACCTCTCTAGAG
droBia1 scf7180000301342:30953-31192 - AGATTCGGCGTGCCCATCTCCGCCAACTTCTGGAGGTTTCAATGAA--GCTGCT-----AAATTTAATTGC--TGTGTTATT------TTTGTGAAT-AATTGGTTTTATT-----TACACAGGTATTGAATCAATAACGAAAGATTCGAGTAAGATTCTGTGACGAGAGAAATGTATGCAGTTGCATGTCAACAATGTAGCATTTCGAGGCGATTTTTCGCTGCCAGCAGAAATAAAAGGAGCTTTAAACTCCTTAACAG
droTak1 scf7180000410708:7291-7532 - AGATTCGG------CATCTCCGCCAACTTCTGGTGGGTTCAATGGTGGGCTGGTAAGCTAAATTTAATTGCTATGTGGTATT------TTTGTGAAT-AAGTAGTTTTATT-----TACTCAGGTATTGAATCAATAACGAAAGATTCGAGTAAGATTCTGTGGCGAGAGAAATGTATGCAGTTGCATGTCAACAATGTAGCATTTCGAGGCGATTTTTCGCTGCCAGCAGAAATAA-AGGAGCTCGAAACTCCTCTACAG
droEug1 scf7180000408808:21410-21654 - AGATTCGGGATGCGAATATTTACCAAATTCTGGAGGATTTAATGCT--GCTGGTAAAC-AAATATAACTGAGATTTTGTATA------TAAGTGATT-AATAATTTATATA-----TGGGTAGGTCTTGAATCGATTACAAAGGAACCCACTAAGATTCTCTGGAGGGAGCAATCGATGCAGTTGCATGTAAACTGTATAGCCTTTCGAGGAGATTCCTCGCTTACAGAAGAAATTA-AGGGGCTGGAAACTCCATTTGAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
AGGTATAGTAGGCGTGGCTTTGCCATCTTGTGGTGGCTTTACTGGT--ACTGGTAAGA-AGGCAACATTGCGATATGTTATTATATATTATGTGATT-AGTTAACTAATAT-----CTTATAGGTATTGAATCAATAGCAAAGGAGCCGAGCAAAATTATGTGGCGTCAGAAATCTATGCAGTTGCATGTGAACAACGTTGCTTTTGAAGGCGACTCTTCGTTGCCAGTTGAAATAA-TGAAGCTCAAAACTCCTTTAGAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................ACTGGT--ACTGGTAAGA-AGGCAACA..................................................................................................................................................................................................2422.004400000
........................................ACTGGT--ACTGGTAAGA-AGGCAAC...................................................................................................................................................................................................2322.004200020
...........................................GGT--ACTGGTAAGA-AGGCAACATT................................................................................................................................................................................................2322.004200011
.........................................................................................................................................................................................CATGTGAACAACGTTGCTTTTGA.....................................................2321.503200010
...........................................GGT--ACTGGTAAGA-AGGCAACATTGCGA............................................................................................................................................................................................2721.503300000
............................................GT--ACTGGTAAGA-AGGCAACATTGC..............................................................................................................................................................................................2421.503300000
.........................................................................................................................................................................................CATGTGAACAACGTTGCTTTTGAAGGC.................................................2721.503300000
...............................................................................................................................TGAATCAATAGCAAAGGAGCCGAGC.............................................................................................................2581.3811900020
...............................................................................................................................TGAATCAATAGCAAAGGAGCCGA...............................................................................................................2381.25101000000
.....................................................................................TATTATGTGATT-AGTTAACTAATAT-----CTAT.............................................................................................................................................2911.001100000
..........................................................................................................................................................................................ATGTGAACAACGTTGCTTTTGAAGGC.................................................2621.002200000
...........................TTGTGGTGGCTTTACTGGT--AC...................................................................................................................................................................................................................2111.001100000
.....................................................................................................................................................................................................................ACTCTTCGTTGCCAGTTGAAATA.........................2311.001100000
.........................................................................................................................................................................................CATGTGAACAACGTTGCTTTTGAAG...................................................2521.002200000
..............TGGCTTTGCCATCTTGTGGTGGCTT..............................................................................................................................................................................................................................2511.001100000
.....................................................................................TATTATGTGATT-AGTTAACTAATA.......................................................................................................................................................2411.001100000
...............................................................................................................................TGAATCAATAGCAAAGGAGCCGAG..............................................................................................................2480.887600001
..................................................................................................................................ATCAATAGCAAAGGAGCCGAGC.............................................................................................................2280.887400021
............................................GT--ACTGGTAAGA-AGGCAACATTGCGAT...........................................................................................................................................................................................2720.501100000
.........................................................................................................................................................................................CATGTGAACAACGTTGCTTTTGAAGGCG................................................2820.501100000
............................................GT--ACTGGTAAGA-AGGCAACATTGCGA............................................................................................................................................................................................2620.501100000
..............................................................................................................................................................................................GAACAACGTTGCTTTTGAAGGCG................................................2320.501000001
......................................................................................ATTATGTGATT-AGTTAACTAAT........................................................................................................................................................2220.501100000
.....................................................................................TATTATGTGATT-AGTTAACTAAT........................................................................................................................................................2320.501100000
.........................................CTGGT--ACTGGTAAGA-AGGCAA....................................................................................................................................................................................................2120.501100000
............................................GT--ACTGGTAAGA-AGGCAACATT................................................................................................................................................................................................2220.501100000
................................................ACTGGTAAGA-AGGCAACATTGC..............................................................................................................................................................................................2220.501100000
...........................................................................................................................................................................................TGTGAACAACGTTGCTTTTGAAGGC.................................................2520.501100000
........................................ACTGGT--ACTGGTAAGA-AGGCAACATT................................................................................................................................................................................................2620.501000001
...........................................GGT--ACTGGTAAGA-AGGCAACATTGC..............................................................................................................................................................................................2520.501000010
...........................................................................................................................................................................................TGTGAACAACGTTGCTTTTGAAGG..................................................2420.501100000
..................................................................................................................................ATCAATAGCAAAGGAGCCGAG..............................................................................................................2180.252200000
..................................................................................................................................ATCAATAGCAAAGGAGCCGAGCA............................................................................................................2380.252100001
...............................................................................................................................TGAATCAATAGCAAAGGAGC..................................................................................................................2080.252100010
................................................................................................................................GAATCAATAGCAAAGGAGCCG................................................................................................................2180.252200000
...............................................................................................................................TGAATCAATAGCAAAGGAGCC.................................................................................................................2180.131000010
............................................................................................................................TATTGAATCAATAGCAAAGGAGCCGAGC.............................................................................................................2880.131100000
...............................................................................................................................TGAATCAATAGCAAAGGAGCCGAGCAA...........................................................................................................2780.131100000
..............................................................................................................................TTGAATCAATAGCAAAGGAGC..................................................................................................................2180.131100000
..................................................................................................................................ATCAATAGCAAAGGAGCCGAGCAAAA.........................................................................................................2680.131100000
...............................................................................................................................TGAATCAATAGCAAAGGAGCCGAT..............................................................................................................2480.131100000
..................................................................................................................................ATCAATAGCAAAGGAGCCGAGCAAAAT........................................................................................................2780.131100000
...............................................................................................................................TGAATCAATAGCAAAGGAGCCG................................................................................................................2280.131100000
droWil2
AAGTT-----------------------------------ACTGGT--ACTGGTAAGA-AGGCAACATTGCGATATGTTATTATATATTATGTGATTTAGTTAATTAATATCTTATGGCAAAGGTATTATATCAATAGCAAAGGAGCCGAGCAAAATTATGTGGCGTCAGAAATCTATGCAGTTTCATGTGAACAACGTTGCTTTTCAAGGCGACTCTTCATTGCCAGTTGAAATAA-TGAAATTCAAAACTCCTTTAGAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
dp5
AGATT------------------------CTGGTGGCTTCAATGGT--TTTGGTAAGC-AAACATAATTGCGATATGTTAAA------CAAGTTAGT-AATTAATTTA--------TGTATAGGTATTGAATCAATAACAAAGGAGCCGACTAAAATTATATGGCGAAAGCAATGTATGCAGTTGAAAGTCAACGACATAGCCTTTCGAGGAGACTCTTCGCTGCCAGCTGAAATAA-TGGAGCTCAAGACTCCATTACAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................................................................................................AAGTCAACGACATAGCCTTTCGA....................................................2324.5090900000000
..........................................................................................................................................................................................AAGTCAACGACATAGCCTTTCGAG...................................................2423.5070700000000
..........................................................................................................................................................................................AAGTCAACGACATAGCCTTTCG.....................................................2223.0060600000000
......................................................................................................................................................................................................TAGCCTTTCGAGGAGACTCTTCGC.......................................2432.6780710000000
..........................................................................................................................................................................................AAGTCAACGACATAGCCTTTCGAGG..................................................2522.0040300010000
.............................................................................................................................................................................................TCAACGACATAGCCTTTCGAGGA.................................................2341.7570700000000
...........................................................................TGTTAAA------CAAGTTAGT-AATTAATT...........................................................................................................................................................2421.5030120000000
.......................................................................................................................................................................AAGCAATGTATGCAGTTGAAAGT.......................................................................2321.5030300000000
..........................................................................................................................................................................................AAGTCAACGACATAGCCTTTC......................................................2121.5030300000000
..............................................................................................................................................................................................CAACGACATAGCCTTTCGAGGAGACTC............................................2741.2550500000000
..............................................................................................................................................................................................CAACGACATAGCCTTTCGAGGAGA...............................................2441.2550400000010
..............................................................................................................................................................................................CAACGACATAGCCTTTCGAGG..................................................2141.2550500000000
.......................................................................................................................................................................AAGCAATGTATGCAGTTGAAAGTC......................................................................2421.0020200000000
...........................................................................................................................................................................................AGTCAACGACATAGCCTTTCGA....................................................2221.0020200000000
..........................................................................................................................................................................................AAGTCAACGACATAGCCTT........................................................1921.0020200000000
.................................................................................................................................................GCCGACTAAAATTATATGGCGAA.............................................................................................2341.0040200000020
......................................................................................................................................................................................................TAGCCTTTCGAGGAGACTCTTCG........................................2331.0030200001000
.............................................................................................................................................................................................TCAACGACATAGCCTTTCGAGG..................................................2241.0040310000000
..........................................................................................................................................................................................AAGTCAACGACATAGCCTTT.......................................................2021.0020200000000
..............................................................................................................................................................................................CAACGACATAGCCTTTCGAGGA.................................................2241.0040400000000
..............................................................................................................................................................................................CAACGACATAGCCTTTCGAGGAG................................................2340.7530300000000
.................................................................................................................................................GCCGACTAAAATTATATGGCGAAAG...........................................................................................2540.7530000100110
.................................................................................................................................................GCCGACTAAAATTATATGGCGAAA............................................................................................2440.7530100000200
..............................................................................................................................................................................................................................TGCCAGCTGAAATAA-TGGAGCTCAAG............2630.6720200000000
...............................................................................................................................................................................................................GAGGAGACTCTTCGCTGCCAG.................................2130.6720200000000
.........................................................................................................................................................................................................CCTTTCGAGGAGACTCTTCGCTGC....................................2430.6720200000000
............................................................................................................................TATTGAATCAATAACAAAGGAGCCGA...............................................................................................................2660.6740100000300
.....................................................................................................................................................................................................ATAGCCTTTCGAGGAGACTCTTCGC.......................................2530.6720200000000
........................................................................................................................TAGGTATTGAATCAATAACAAAGG.....................................................................................................................2450.6030100000200
..................................................................................................................................................................GGCGAAAGCAATGTATGCAGTTGA...........................................................................2440.5020100100000
............................................................................................................................................................................................GTCAACGACATAGCCTTTCGAG...................................................2240.5020200000000
...........................................................................TGTTAAA------CAAGTTAGT-AATTAA.............................................................................................................................................................2220.5010100000000
.......................................................................................................................................................................AAGCAATGTATGCAGTTGAAAGTCAAC...................................................................2720.5010100000000
.............................................................................................................................................................................TGTATGCAGTTGAAAGTCAACGAC................................................................2420.5010010000000
...........................................................................TGTTAAA------CAAGTTAGT-AATTAATTT..........................................................................................................................................................2520.5010100000000
.......................................................................................................................................................................................................................TCTTCGCTGCCAGCTGAAATAA-TGGAG..................2720.5010100000000
......................................................................CGATATGTTAAA------CAAGTTAGT-AAT................................................................................................................................................................2420.5010100000000
.........................................................................................................................................................................................................................TTCGCTGCCAGCTGAAATAA-TGGAG..................2520.5010100000000
..............................................................................................................................................................................................CAACGACATAGCCTTTCGAGGAGACT.............................................2640.5020200000000
......................................................................CGATATGTTAAA------CAAGTTAGT-AATT...............................................................................................................................................................2520.5010100000000
.................................................................................................................................................................................TGCAGTTGAAAGTCAACGACATAGCCT.........................................................2720.5010100000000
..................................................................................................................................................................GGCGAAAGCAATGTATGCAGTTG............................................................................2340.5020200000000
..............................................................................................................................................................................................CAACGACATAGCCTTTCGAGGAGAC..............................................2540.5020200000000
..........................................................................................................................................................................................AAGTCAACGACATAGCCTTTCGAGGA.................................................2620.5010100000000
.........................................................................................................................................................................................................................TTCGCTGCCAGCTGAAATAA-TGGAGC.................2620.5010100000000
.......................................................................................................................................................................AAGCAATGTATGCAGTTGAAAG........................................................................2220.5010100000000
...............................................................................................................................TGAATCAATAACAAAGGAGCCG................................................................................................................2260.5030300000000
......................................................................................................................................................................................TTGAAAGTCAACGACATAGCCTTT.......................................................2420.5010100000000
...............................................................................................................................................................................TATGCAGTTGAAAGTCAACGAC................................................................2220.5010100000000
...............................................................................................................................................................................TATGCAGTTGAAAGTCAACGACA...............................................................2320.5010100000000
...............................................................................................................................................................TATGGCGAAAGCAATGTATGC.................................................................................2140.5020110000000
......................................................................CGATATGTTAAA------CAAGTTAGT-AAA................................................................................................................................................................2420.5010100000000
.......................................................................GATATGTTAAA------CAAGTTAGT-AAT................................................................................................................................................................2320.5010100000000
......................................................................CGATATGTTAAA------CAAGTTAGT-AA.................................................................................................................................................................2320.5010100000000
........................................................................................................................................................................................................GCCTTTCGAGGAGACTCTTCGC.......................................2230.3310000100000
.............................................................................................................................................................TATATGGCGAAAGCAATGTATGCAGT..............................................................................2630.3310100000000
..............................................................................................................................................................................................................................TGCCAGCTGAAATAA-TGGAGCT................2230.3310000100000
..............................................................................................................................................................................................................................TGCCAGCTGAAATAA-TGGAGC.................2130.3310100000000
......................................................................................................................................................................................................TAGCCTTTCGAGGAGACTCTTCGCTG.....................................2630.3310100000000
................................................................................................................................................................................................................................................GAGCTCAAGACTCCATTACAG2130.3310100000000
...........................................................................................................................................................................................................................CGCTGCCAGCTGAAATAA-TGGAG..................2330.3310100000000
...............................................................................................................................................................................................................................GCCAGCTGAAATAA-TGGAGCTCAAGAC..........2730.3310100000000
..................................................................................................................................................................................................................................AGCTGAAATAA-TGGAGCTCAAGA...........2330.3310100000000
..............................................................................................................................................................................................................................TGCCAGCTGAAATAA-TGGAGCTCA..............2430.3310100000000
..............................................................................................................................................................................................................................TGCCAGCTGAAATAA-TGGAGCTC...............2330.3310100000000
...............................................................................................................................................................................................................................GCCAGCTGAAATAA-TGGAGCTCA..............2330.3310100000000
.......................................................................................................................................................................................................AGCCTTTCGAGGAGACTCTTCGC.......................................2330.3310100000000
.................................................................AATTGCGATATGTTAAA------CAAGT........................................................................................................................................................................2230.3310100000000
.............................................................................................................................................................................................................TCGAGGAGACTCTTCGCTGCCA..................................2230.3310100000000
.......................................................................................................................................................................................................AGCCTTTCGAGGAGACTCTT..........................................2030.3310100000000
................................................................................................................................................................................................................AGGAGACTCTTCGCTGCCA..................................1930.3310100000000
..............................................................................................................................................................................................................................TGCCAGCTGAAATAA-TGGA...................1930.3310100000000
..............................................................................................................................................................................................................................TGCCAGCTGAAATAA-TGGAGCTCAAGA...........2730.3310100000000
.............................................................................................................................................................................................................TCGAGGAGACTCTTCGCTGCC...................................2130.3310100000000
.......................................................AGC-AAACATAATTGCGATATGT.......................................................................................................................................................................................2230.3310100000000
.........................................................................................................................................................................................................CCTTTCGAGGAGACTCTTCGCTGCCA..................................2630.3310100000000
...............................................................................................................................TGAATCAATAACAAAGGAGCC.................................................................................................................2160.3320200000000
.................................................................................................................................................GCCGACTAAAATTATATGGCGAAAGCA.........................................................................................2740.2510100000000
............................................................................................................................................................................................GTCAACGACATAGCCTTTCGAGGA.................................................2440.2510100000000
.................................................................................................................................................................TGGCGAAAGCAATGTATGCAGTTGA...........................................................................2540.2510100000000
...............................................................................................................................................................TATGGCGAAAGCAATGTATGCAGTTG............................................................................2640.2510100000000
.................................................................................................................................................GCCGACTAAAATTATATGG.................................................................................................1940.2510100000000
..........................................TGGT--TTTGGTAAGC-AAACATA...................................................................................................................................................................................................2140.2510100000000
...............................................................................................................................................................................................AACGACATAGCCTTTCGAGGA.................................................2140.2510100000000
.............................................................................................................................................................................................TCAACGACATAGCCTTTCGAGGAGA...............................................2540.2510100000000
...................................................................................................................................................................GCGAAAGCAATGTATGCAGTTGA...........................................................................2340.2510100000000
.............................................................................................................................................................................................TCAACGACATAGCCTTTCGAGGAGACTC............................................2840.2510100000000
..............................................................................................................................................................................................CAACGACATAGCCTTTCGAG...................................................2040.2510100000000
...................................................................................................................................................................GCGAAAGCAATGTATGCAGTTG............................................................................2240.2510100000000
..................................................................................................................................................CCGACTAAAATTATATGGCGAAAGCAA........................................................................................2740.2510100000000
.............................................................................................................................................................................................TCAACGACATAGCCTTTCGAGGAGAC..............................................2640.2510100000000
.....................................TTCAATGGT--TTTGGTAAGC-AAACATAAT.................................................................................................................................................................................................2840.2510100000000
.................................................................................................................................................................TGGCGAAAGCAATGTATGCAGTTG............................................................................2440.2510100000000
..................................................................................................................................................................GGCGAAAGCAATGTATGCAGT..............................................................................2140.2510100000000
...............................................................................................................................................................................................AACGACATAGCCTTTCGAGGAG................................................2240.2510100000000
.................................................................................................................................................................................................CGACATAGCCTTTCGAGGA.................................................1940.2510100000000
..............................TGGTGGCTTCAATGGT--TTTGGTAAGC-T.........................................................................................................................................................................................................2740.2510100000000
.................................................................................................................................................GCCGACTAAAATTATATGGCGAAAGC..........................................................................................2640.2510100000000
.............................................................................................................................................................................................TCAACGACATAGCCTTTCGAGA..................................................2240.2510100000000
.......................................CAATGGT--TTTGGTAAGC-AAACA.....................................................................................................................................................................................................2240.2510100000000
............................................GT--TTTGGTAAGC-AAACATAATTGC..............................................................................................................................................................................................2440.2510100000000
......................................................................................................................TATAGGTATTGAATCAATAACAAAGGA....................................................................................................................2750.2010100000000
..........................................................................................................TA--------TGTATAGGTATTGAATCAATAAC..........................................................................................................................2550.2010100000000
...................................................................................................................................TCAATAACAAAGGAGCCGACTAAA..........................................................................................................2450.2010000001000
........................................................................................................................TAGGTATTGAATCAATAACAAAGGA....................................................................................................................2550.2010100000000
.........................................................................................................................................ACAAAGGAGCCGACTAAAAT........................................................................................................2050.2010100000000
..ATT------------------------CTGGTGGCTTCAATGGT--.....................................................................................................................................................................................................................2050.2010100000000
....................................................................................................................TGTATAGGTATTGAATCAATAACA.........................................................................................................................2450.2010100000000
........................................................................................................................TAGGTATTGAATCAATAACAAAGGAG...................................................................................................................2650.2010010000000
............................................................................................................................TATTGAATCAATAACAAAGGAGCCG................................................................................................................2560.1710100000000
...............................................................................................................................TGAATCAATAACAAAGGAGCCGAC..............................................................................................................2460.1710100000000
................................................................................................................................GAATCAATAACAAAGGAGCCGAC..............................................................................................................2360.1710010000000
................................................................................................................................GAATCAATAACAAAGGAGCCGA...............................................................................................................2260.1710100000000
...............................................................................................................................TGAATCAATAACAAAGGAGCCGA...............................................................................................................2360.1710100000000
..............................................................................................................................TTGAATCAATAACAAAGGAGC..................................................................................................................2160.1710000010000
droPer2
AGATT------------------------CTGGTGGCTTCAATGGT--TTTGGTAAGC-AAACATAATTGCGATATGTTAAA------CAAGTGAGT-AATTAATTTA--------TGTATAGGTATTGAATCAATAACAAAGGAGCCGACTAAAATTATATGGCGAAAGCAATATATGCAGTTGAATGTCAACGACATAGCCTTTCGAGGAGACTCTTCGCTGCCAGCTGAAATAA-TGGAGCTCAAGACTCCATTACAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................................................................................................................................................GAGGAGACTCTTCGCTGCCAG.................................2130.331010000
....T------------------------CTGGTGGCTTCAATGGT--TTTG.................................................................................................................................................................................................................2240.251010000
.....................................................................................................................................................................................................................................TGAAATAA-TGGAGCTCAAGACTCCAT.....2640.251010000
droAna3
AGATTCGGCGTGCGCATCTCCGCCAAATTCGGGTGGATTCAATGGA--GCTGGTAAACCAAATTTAATTGCTATGTGTTACT------TTTGTGAAT-AATTAGTTTTTTT-----TACACAGGTATTGAATCAATAACAAAAGATTCCAGTAAGATTATGTGGCGAGAGAAATGTATGCAGTTACATGTTAACAATGTAGCATTTCGAGGCGACTTTTCGCTTCCAGCAGACATAA-AGGAGCTCGAAACTCCTCTAGAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................TATGCAGTTACATGTTAACAATGTAGC...........................................................2711.001010000
................................................................................................................................................ATTCCAGTAAGATTATGTGGCGA..............................................................................................2311.001100000
..............................................................................................................................................................................................................................TTCCAGCAGACATAA-AGGAGCTCGA.............2531.003300000
................................................................................................................................................................................................................................CCAGCAGACATAA-AGGAGCTCGA.............2330.672110000
...................................................................................................................................................................................................................................GCAGACATAA-AGGAGCTCGAAACT.........2430.672200000
..............................................................................................................................................................................................TAACAATGTAGCATTTCGAGG..................................................2150.603030000
...............................................................................................................................................................................................................................TCCAGCAGACATAA-AGGAGCTCGAA............2530.331010000
................................................................................................................................................................................................................................CCAGCAGACATAA-AGGAGCTCGAAA...........2530.331010000
................................................................................................................................................................................................................................CCAGCAGACATAA-AGGAGCTCGAAAC..........2630.331100000
......................................................................................................................................................................................................TAGCATTTCGAGGCGACTTTTCGC.......................................2450.201100000
..............................................................................................................................................................................................TAACAATGTAGCATTTCGAG...................................................2050.201010000
...........................................GGA--GCTGGTAAACCAAATTTAATTGC..............................................................................................................................................................................................2650.201100000
......................................TCAATGGA--GCTGGTAAACCAAATTT....................................................................................................................................................................................................2550.201100000
..............................................................................................................................................................................................TAACAATGTAGCATTTCGAGGCGACTT............................................2750.201100000
...............................................................................................................................................................................................AACAATGTAGCATTTCGAGGC.................................................2150.201010000
....................................................................................................................................................................................................TGTAGCATTTCGAGGCGACTTTTCGC.......................................2650.201010000
....................................................................................................................................................................................................TGTAGCATTTCGAGGCGACTTTTCGCT......................................2750.201010000
......................................................................................................................................................GTAAGATTATGTGGCGAGA............................................................................................1950.201000010
..........................................TGGA--GCTGGTAAACCAAATTTAATTGC..............................................................................................................................................................................................2750.201100000
..............................................................................................................................................................................................TAACAATGTAGCATTTCGAGGCGACT.............................................2650.201010000
...........................................GGA--GCTGGTAAACCAAATTTAATTG...............................................................................................................................................................................................2550.201100000
droBip1
AGATTTGGCGTGCGCATCTTCGCCAAATTCTGGTGAGTTCAATGGA--GCTGGTAAGCCAAATTTAAATGCT--GTGTTTTT------TTTGTGACT-AGATAGTTTTATT-----TACAAAGGTATTGAAACAAAAACAAAAGATTCAAGTAAGATTATGTGGCGAGAGAAATGTATGCAGGTGCATGTTAACAATGTAGCATTTCGAGGCGATTTTTCGCTGCCAGCAGAAATAA-GGGCGCTC-AAACTCCTCTACAGSizeHit CountTotal NormTotal
No Reads
droKik1
ATATTCAGTGTGTACATCTGAGCCTTCTTCTGGTGGTTTCAATTGT--GCCGGTAGGA-AAACTAAATTATATAATGGTACT------CAAATAACT-AATTAATTTA--------TCAACAGATGTTGAATCAATAAACAAGGTGCCGACAAAGATAACATGGCGGCAGCAATCGATGCAGTTGCATGTAAGCGACATAGCTTTTCGGGGAGATTCTTCACTCCCAGATTGTATAA-AGGACCTTAAAACACCGATGCAGSizeHit CountTotal NormTotal
No Reads
droFic1
AGATTCGGCGTGCGCATCTCCGCCAACTGCTGGTGGGTTCAATGGA--GCTGGTAAGCCAAATTTAATTGCTAC-TGGTATT------TTAGTGTAC-AATTAGTTTTATT-----TACACAGGTATTGAATCAATAACAAAAGATTCGAGTAAGATTCTGTGGCGAGAGAAATGTATGCAGTTGCATGTTAACAATGTAGCATTTCGAGGAGATTTTTCGCTGCCATCAGAAATAA-AGGAGCTCGAAACTCCTCTAGAGSizeHit CountTotal NormTotal
No Reads
droRho1
AGATTCGACCTGCGCATCTCCGCCAACTTCTGGTGGGTTCGATGGA--GCTGGTAAGCCAAATTCAATTGC--TGTGTTATT------TTAGTGAAT-AATTAGTTTTATT-----TACACAGGTA--------ATAACAAAAGATATGAATAAGATTATGTGGCGAGAGAAATGTATGCAGTTGCATGTTAACAATGTAGCATTTCGAGTCGATTTTTCGCTGCCAGCTGAAATAA-AGAAACTCGAAACCTCTCTAGAGSizeHit CountTotal NormTotal
No Reads
droBia1
AGATTCGGCGTGCCCATCTCCGCCAACTTCTGGAGGTTTCAATGAA--GCTGCT-----AAATTTAATTGC--TGTGTTATT------TTTGTGAAT-AATTGGTTTTATT-----TACACAGGTATTGAATCAATAACGAAAGATTCGAGTAAGATTCTGTGACGAGAGAAATGTATGCAGTTGCATGTCAACAATGTAGCATTTCGAGGCGATTTTTCGCTGCCAGCAGAAATAAAAGGAGCTTTAAACTCCTTAACAGSizeHit CountTotal NormTotal
No Reads
droTak1
AGATTCGG------CATCTCCGCCAACTTCTGGTGGGTTCAATGGTGGGCTGGTAAGCTAAATTTAATTGCTATGTGGTATT------TTTGTGAAT-AAGTAGTTTTATT-----TACTCAGGTATTGAATCAATAACGAAAGATTCGAGTAAGATTCTGTGGCGAGAGAAATGTATGCAGTTGCATGTCAACAATGTAGCATTTCGAGGCGATTTTTCGCTGCCAGCAGAAATAA-AGGAGCTCGAAACTCCTCTACAGSizeHit CountTotal NormTotal
No Reads
droEug1
AGATTCGGGATGCGAATATTTACCAAATTCTGGAGGATTTAATGCT--GCTGGTAAAC-AAATATAACTGAGATTTTGTATA------TAAGTGATT-AATAATTTATATA-----TGGGTAGGTCTTGAATCGATTACAAAGGAACCCACTAAGATTCTCTGGAGGGAGCAATCGATGCAGTTGCATGTAAACTGTATAGCCTTTCGAGGAGATTCCTCGCTTACAGAAGAAATTA-AGGGGCTGGAAACTCCATTTGAGSizeHit CountTotal NormTotal
No Reads

Generated: 05/17/2015 at 11:14 PM